Citrus Sinensis ID: 017121
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 377 | ||||||
| 357165547 | 468 | PREDICTED: GPCR-type G protein 1-like [B | 1.0 | 0.805 | 0.864 | 0.0 | |
| 413919414 | 468 | hypothetical protein ZEAMMB73_364791 [Ze | 1.0 | 0.805 | 0.862 | 0.0 | |
| 225454688 | 468 | PREDICTED: GPCR-type G protein 1 [Vitis | 1.0 | 0.805 | 0.928 | 0.0 | |
| 413919411 | 484 | hypothetical protein ZEAMMB73_364791 [Ze | 1.0 | 0.778 | 0.826 | 0.0 | |
| 449455238 | 480 | PREDICTED: GPCR-type G protein 1-like [C | 0.997 | 0.783 | 0.920 | 0.0 | |
| 38345777 | 468 | OSJNBa0083N12.15 [Oryza sativa Japonica | 1.0 | 0.805 | 0.864 | 0.0 | |
| 125591520 | 468 | hypothetical protein OsJ_16035 [Oryza sa | 1.0 | 0.805 | 0.864 | 0.0 | |
| 116310918 | 468 | B0403H10-OSIGBa0105A11.8 [Oryza sativa I | 1.0 | 0.805 | 0.864 | 0.0 | |
| 255558113 | 468 | Protein GPR89A, putative [Ricinus commun | 1.0 | 0.805 | 0.925 | 0.0 | |
| 356538676 | 468 | PREDICTED: GPCR-type G protein 2-like [G | 0.994 | 0.801 | 0.906 | 0.0 |
| >gi|357165547|ref|XP_003580421.1| PREDICTED: GPCR-type G protein 1-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/377 (86%), Positives = 358/377 (94%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
+LPYYHCYL+L NSGVR++RA L A LFL+ FLY FWRMGIHFPMPSPEKGFFT+PQLVS
Sbjct: 92 VLPYYHCYLLLRNSGVRRQRAFLVAALFLMVFLYGFWRMGIHFPMPSPEKGFFTMPQLVS 151
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
RIGVIGV+VMAVL+GFGAVNLPYSYLSLFIREIDE++IKALERQLMQS+ETCIAKKKKI+
Sbjct: 152 RIGVIGVSVMAVLSGFGAVNLPYSYLSLFIREIDETDIKALERQLMQSMETCIAKKKKIV 211
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
L +MEM+RIQGSEEKLKARSF KRIVGTVVRSVQ+DQ EQDIK +EAEVQALEELSKQLF
Sbjct: 212 LSKMEMERIQGSEEKLKARSFLKRIVGTVVRSVQEDQTEQDIKNLEAEVQALEELSKQLF 271
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LEIYELRQAK AAAYSRTWRGH QNLLGYALS+YCVYKM+K+LQSVVFK AGSVDPVTMT
Sbjct: 272 LEIYELRQAKIAAAYSRTWRGHFQNLLGYALSVYCVYKMLKALQSVVFKSAGSVDPVTMT 331
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
I+IFL+ FDIGI+ LLSQYISL+FIGML+V+S+RGFL NVMKFFFAVSRVGSGS++NVV
Sbjct: 332 ITIFLRHFDIGIDVSLLSQYISLMFIGMLVVVSIRGFLANVMKFFFAVSRVGSGSTTNVV 391
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
LFLSEIMGMYF+SSILLIRKSLA EYR+IITEVLGG+IQFDFYHRWFDAIFVASAFLSLL
Sbjct: 392 LFLSEIMGMYFISSILLIRKSLANEYRVIITEVLGGDIQFDFYHRWFDAIFVASAFLSLL 451
Query: 361 LLSAHYTSRQADKHPID 377
L+SA YTSRQADKHPID
Sbjct: 452 LISAQYTSRQADKHPID 468
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|413919414|gb|AFW59346.1| hypothetical protein ZEAMMB73_364791 [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|225454688|ref|XP_002270494.1| PREDICTED: GPCR-type G protein 1 [Vitis vinifera] gi|297737266|emb|CBI26467.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|413919411|gb|AFW59343.1| hypothetical protein ZEAMMB73_364791 [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|449455238|ref|XP_004145360.1| PREDICTED: GPCR-type G protein 1-like [Cucumis sativus] gi|449515035|ref|XP_004164555.1| PREDICTED: GPCR-type G protein 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|38345777|emb|CAD41818.2| OSJNBa0083N12.15 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|125591520|gb|EAZ31870.1| hypothetical protein OsJ_16035 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|116310918|emb|CAH67856.1| B0403H10-OSIGBa0105A11.8 [Oryza sativa Indica Group] gi|125549595|gb|EAY95417.1| hypothetical protein OsI_17258 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|255558113|ref|XP_002520085.1| Protein GPR89A, putative [Ricinus communis] gi|223540849|gb|EEF42409.1| Protein GPR89A, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356538676|ref|XP_003537827.1| PREDICTED: GPCR-type G protein 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 377 | ||||||
| TAIR|locus:2010796 | 468 | GTG1 "GPCR-type G protein 1" [ | 1.0 | 0.805 | 0.726 | 5.3e-143 | |
| UNIPROTKB|Q5F448 | 455 | GPR89 "Golgi pH regulator" [Ga | 0.909 | 0.753 | 0.414 | 1.7e-68 | |
| UNIPROTKB|B7ZAQ6 | 455 | GPR89A "Golgi pH regulator A" | 0.909 | 0.753 | 0.409 | 5.6e-68 | |
| UNIPROTKB|P0CG08 | 455 | GPR89B "Golgi pH regulator B" | 0.909 | 0.753 | 0.409 | 5.6e-68 | |
| UNIPROTKB|Q5BIM9 | 455 | GPR89A "Golgi pH regulator" [B | 0.909 | 0.753 | 0.409 | 9.2e-68 | |
| UNIPROTKB|B2ZXD5 | 455 | GPR89 "Golgi pH regulator" [Cr | 0.909 | 0.753 | 0.400 | 1.2e-65 | |
| MGI|MGI:1914799 | 455 | Gpr89 "G protein-coupled recep | 0.909 | 0.753 | 0.400 | 1.2e-65 | |
| RGD|1304837 | 389 | Gpr89b "G protein-coupled rece | 0.909 | 0.881 | 0.400 | 1.5e-65 | |
| WB|WBGene00013551 | 465 | Y75B8A.16 [Caenorhabditis eleg | 0.925 | 0.750 | 0.377 | 7.6e-64 | |
| WB|WBGene00007528 | 460 | C11H1.2 [Caenorhabditis elegan | 0.827 | 0.678 | 0.405 | 2e-63 |
| TAIR|locus:2010796 GTG1 "GPCR-type G protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1398 (497.2 bits), Expect = 5.3e-143, P = 5.3e-143
Identities = 274/377 (72%), Positives = 308/377 (81%)
Query: 1 MLPYYHCYLMLCNSGVRKERXXXXXXXXXXXXXXXXWRMGIHFPMPSPEKGFFTIPQLVS 60
MLPYYHCYLML NSGVR+ER WRMG+HFPMPS +KGFFT+PQLVS
Sbjct: 92 MLPYYHCYLMLRNSGVRRERASVGAFLFLSAFLYAFWRMGVHFPMPSADKGFFTMPQLVS 151
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
RIGVIGVT+MAVL+GFGAVNLPYSY+SLFIREI+E++I +LERQL+QS ETCIAKKKKII
Sbjct: 152 RIGVIGVTLMAVLSGFGAVNLPYSYISLFIREIEEADIISLERQLIQSTETCIAKKKKII 211
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
LCQ+E++R QGSEE K SFF+RIVGTVVRSVQDDQKEQDIKI+EAEV+ALEELSKQLF
Sbjct: 212 LCQLEVERNQGSEENQKRSSFFRRIVGTVVRSVQDDQKEQDIKILEAEVEALEELSKQLF 271
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE+YELRQAK+AAAYSRTW+GH+QNLLGYA SIYCVYKM+KSLQSVVFKEAG+ DPVT
Sbjct: 272 LEVYELRQAKDAAAYSRTWKGHVQNLLGYACSIYCVYKMLKSLQSVVFKEAGTKDPVTTM 331
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXX 300
ISIFL+ FDIG++A LLSQYISLLFIGMLIV+SVRGFL N+MK
Sbjct: 332 ISIFLRLFDIGVDAALLSQYISLLFIGMLIVISVRGFLTNLMKFFFAVSRVGSGSSSNVV 391
Query: 301 XXXXEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVXXXXXXXX 360
EIMGMYF+SSILLIRKSL EYR IIT+VLGG+IQFDFYHRWFDAIFV
Sbjct: 392 LFLSEIMGMYFLSSILLIRKSLRNEYRGIITDVLGGDIQFDFYHRWFDAIFVASAFLSLV 451
Query: 361 XXXXHYTSRQADKHPID 377
HYTSRQ+DKH I+
Sbjct: 452 LLSAHYTSRQSDKHAIE 468
|
|
| UNIPROTKB|Q5F448 GPR89 "Golgi pH regulator" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B7ZAQ6 GPR89A "Golgi pH regulator A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P0CG08 GPR89B "Golgi pH regulator B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5BIM9 GPR89A "Golgi pH regulator" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B2ZXD5 GPR89 "Golgi pH regulator" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
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| MGI|MGI:1914799 Gpr89 "G protein-coupled receptor 89" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1304837 Gpr89b "G protein-coupled receptor 89B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| WB|WBGene00013551 Y75B8A.16 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00007528 C11H1.2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 377 | |||
| pfam12430 | 99 | pfam12430, ABA_GPCR, Abscisic acid G-protein coupl | 2e-31 | |
| pfam12537 | 71 | pfam12537, DUF3735, Protein of unknown function (D | 4e-21 |
| >gnl|CDD|221573 pfam12430, ABA_GPCR, Abscisic acid G-protein coupled receptor | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 2e-31
Identities = 48/98 (48%), Positives = 70/98 (71%)
Query: 272 MSVRGFLMNVMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIIT 331
S+RG L + FF A+ + S SS+ +VLFL+EIMG+YF+S++LL+R +L EYR IIT
Sbjct: 2 TSIRGVLTTLSSFFRALPGLLSSSSNLLVLFLAEIMGIYFISTVLLLRSNLPAEYRSIIT 61
Query: 332 EVLGGEIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSR 369
++LG +++F FY RWFD IF+ SA L+ + L + SR
Sbjct: 62 DILGSDLEFRFYDRWFDKIFLLSALLTAIGLYLAHKSR 99
|
This domain family is found in eukaryotes, and is typically between 177 and 216 amino acids in length. This family is part of the abscisic acid (ABA) G-protein coupled receptor. ABA is a stress hormone in plants. Length = 99 |
| >gnl|CDD|221626 pfam12537, DUF3735, Protein of unknown function (DUF3735) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 377 | |||
| KOG2417 | 462 | consensus Predicted G-protein coupled receptor [Si | 100.0 | |
| PF12430 | 196 | ABA_GPCR: Abscisic acid G-protein coupled receptor | 100.0 | |
| PF12537 | 72 | DUF3735: Protein of unknown function (DUF3735); In | 99.93 | |
| PF04791 | 471 | LMBR1: LMBR1-like membrane protein; InterPro: IPR0 | 94.85 | |
| PRK11546 | 143 | zraP zinc resistance protein; Provisional | 90.99 |
| >KOG2417 consensus Predicted G-protein coupled receptor [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-120 Score=874.69 Aligned_cols=372 Identities=54% Similarity=0.924 Sum_probs=354.2
Q ss_pred CchhHHHHHHHhccCCchhhHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCccchhchhhceehhhHHHHHHhhcccccc
Q 017121 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVN 80 (377)
Q Consensus 1 v~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~FwklG~~~p~~~~~~g~~~~e~~l~RvgViGVt~mA~LSGfGAVs 80 (377)
++|+|+||+++++.++++++++++++.+|.+|+|+|||+|||||+|||+||+|++||.+|||||||||+||+||||||||
T Consensus 91 ~ip~Y~~y~ii~~i~v~~k~~~~~s~l~w~~FlYffWkiGdpFPmlSakhGiftieQliSRvgVIGVTlMAvLSGFGAVN 170 (462)
T KOG2417|consen 91 MIPYYHCYLIIRNIGVRRKLALPFTILFWFIFLYFFWKIGDPFPMLSAKHGIFTIEQLISRVGVIGVTLMAVLSGFGAVN 170 (462)
T ss_pred HHHHHhheeeeecccchHHHHhHHHHHHHHHHHHHHHHhCCCCCCCCcccceeeHHHHHhhhhhhhhhHHHHHhccCccC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhccchhhhhccchhhhhhcceeecccCCchhH
Q 017121 81 LPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQ 160 (377)
Q Consensus 81 ~Py~~~~~f~r~V~~~dI~~~e~~l~~t~~~l~~Kk~rl~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~ 160 (377)
+||+||++|.|||+|.||.++||||.||+||+.+||||+++++-+ ++...+++.++.++|+.|++|..-++.++++.++
T Consensus 171 ~PYsyms~FiR~Vee~di~~lErrL~qtmdmiisKKkk~a~~~l~-~~~l~~e~~~k~pSff~r~w~~~~~~~~~~~~~~ 249 (462)
T KOG2417|consen 171 APYSYMSYFIRPVEETDIIQLERRLAQTMDMIISKKKKMAMAQLE-EKRLQSEKVQKEPSFFRRFWGMFSSSVQDNTLSS 249 (462)
T ss_pred CchhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhcccCCcHHHHHHHHHHHHhccccchh
Confidence 999999999999999999999999999999999999999988853 2233444466778999999873334456677788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHHhhccceeehhhHHHHHHHHHhhcccCCCCChHHHH
Q 017121 161 DIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240 (377)
Q Consensus 161 ~i~~L~~EI~~Le~l~~~L~~el~~L~~~~~~~~~s~T~~G~~~~~~g~~fsiYCvyKi~~s~~~~~f~~~~~~Dpit~~ 240 (377)
||+.||+|+++||+++||||+|+.||+++++|.++||||+|+++|++||+||+||||||+++++|++|+|.|++||+||+
T Consensus 250 ~i~~lq~EV~~LEeLsrqLFLE~~eLr~~ker~~~SkTfkG~yfN~LG~ffSiYCvwKif~s~inIvFdrvGk~DPVTr~ 329 (462)
T KOG2417|consen 250 DIKLLQQEVEPLEELSRQLFLELVELRQMKERVAFSKTFKGKYFNVLGHFFSIYCVWKIFMSLINIVFDRVGKVDPVTRG 329 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHhhhhHhHHHHHHHHHHHHHHHHhhhccCcCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHHHHHHHHHHHhh
Q 017121 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRK 320 (377)
Q Consensus 241 L~~~~~~~~~~~d~~~~s~~ISf~L~G~liv~S~r~~L~tl~~~~~~~s~~~s~~~~~i~L~laqlmG~Y~iSt~LLlRs 320 (377)
+++.++++|++.|+..|+|||||+|+|+|+++|+||+|.|++||+++.++++++|. ++|+++|+|||||+|++||||+
T Consensus 330 IeI~v~~~gi~~Dv~fwsQyISf~lVG~i~vtSvRGll~tltkf~y~~~~s~ssn~--ivl~l~qimgmyf~ssvllirm 407 (462)
T KOG2417|consen 330 IEITVNYLGIDFDVSFWSQYISFFLVGVIAVTSVRGLLITLTKFFYSISSSKSSNI--IVLFLAQIMGMYFVSSVLLIRM 407 (462)
T ss_pred eEEEEEEecccchHHHHHHHHHHHhhheeEEeehhhhhhhhhhhhheecccccccc--hHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred ccchHHHHHHHHHhcCCccccchhhhhhHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 017121 321 SLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSRQADKHPI 376 (377)
Q Consensus 321 nLP~~~~~~i~~~Lg~~l~f~f~~~wFD~iFl~Sa~~t~~~i~~~~~~~~~~~~~~ 376 (377)
|+|.|||.++|++|| |++|||||||||.+|++||+.|+++++++||++++|+||.
T Consensus 408 s~p~Eyr~iit~VlG-dlqfnfyhRwfdviFl~Sa~~si~~L~l~~k~~~~~~~a~ 462 (462)
T KOG2417|consen 408 SMPAEYRTIITEVLG-DLQFNFYHRWFDVIFLVSALSSILFLYLHHKSRQSDKHAI 462 (462)
T ss_pred cChHHHHHHHHHHhh-hhcchhHHHHHHHHHHHHHHHHHHHHHHHhccccccccCC
Confidence 999999999999999 8999999999999999999999999999999999999974
|
|
| >PF12430 ABA_GPCR: Abscisic acid G-protein coupled receptor | Back alignment and domain information |
|---|
| >PF12537 DUF3735: Protein of unknown function (DUF3735); InterPro: IPR022535 This conserved domain is found in a subunit of a voltage dependent anion channel required for acidification and functions of the Golgi apparatus; it may function in counter-ion conductance | Back alignment and domain information |
|---|
| >PF04791 LMBR1: LMBR1-like membrane protein; InterPro: IPR006876 This group of uncharacterised proteins have a conserved C-terminal region which is found in LMBR1 and in the lipocalin-1 receptor | Back alignment and domain information |
|---|
| >PRK11546 zraP zinc resistance protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 377 | |||
| 4dzn_A | 33 | Coiled-coil peptide CC-PIL; de novo protein; HET: | 84.78 |
| >4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B | Back alignment and structure |
|---|
Probab=84.78 E-value=2 Score=27.02 Aligned_cols=28 Identities=32% Similarity=0.440 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017121 161 DIKIMEAEVQALEELSKQLFLEIYELRQ 188 (377)
Q Consensus 161 ~i~~L~~EI~~Le~l~~~L~~el~~L~~ 188 (377)
||++|++||.+|+.--..|-.|+..|++
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5788888888887766666667766654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00