Citrus Sinensis ID: 017575

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MGRALFAVTNVATEVNSVEQAQKRSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEVFS
ccccccEEEccccccccHHHHHHHHcccccccccccHHcccHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHccccccccccccccEEcccccccccccccccHHHHHHHccccccccccccccccEEEEEccccccHHHHHHHHHHHHcccEEEEcccccccccccEEEEEEcccccccccHHHHcHHccEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHc
cccEEEEEEEcccccccccHHHHHHHccccccccEEEEEcHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHccccEEEcccccccccccHHHHcHHHHHHHHccccccEEEEEEEEEEcccccccccEEEEEcHHHHHHHcccccccHHHHHHcccEEEEEHHHHHHHHHHHHHHHHHHccccEEEEccEEEEcccEEEEEcccccccccccHHHHHHcccEEEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHcccccHHHHHHHHHHHc
MGRALFAVTNVATEVNSVEQAQKrskesqrpvypftaiVGQEEMKLCLLLnvidpkiggvmimgdrgtgksttVRSLVDLLPVIKvvvgdpynsdpedpeamgieVRESVVKGEELSITFSKinmvdlplgatedrvcGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSaasgwntveregisishparfiligsgnpeegelrpQLLDRfgmhaqvgtvRDAELRVKIVEERArfdknpkeFRDSYKAEQAKLQQQIASArsslpavqidhdLKVKISKVCAElnvdglrgdIVSNRAAKALAALkgrdkvsaEDIATVMPnclrhrlrkdplesidSGLLIIEKFYEVFS
mgralfavtnvatevnsveqaqkrskesqrpvyPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVvgdpynsdpedpeamgiEVRESVVKGEELSITfskinmvdlplgATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEregisishpARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIveerarfdknpkefRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELnvdglrgdivSNRAAKALAalkgrdkvsaediatvmpnclrhrlrkdplesidsgllIIEKFYEVFS
MGRALFAVTNVATEVNSVEQAQKRSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYvdevnllddhlvdvlldSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRaakalaalkGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEVFS
*******************************VYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPY*************VRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGS**********QLLDRFGMHAQVGTVRDAELRVKIVE***********************************AVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEV**
*********************************PFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARF****KE****YKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLE***SGLLIIEKFYEVFS
MGRALFAVTNVATEV***************PVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSY***************SSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEVFS
**RALFAVTNVAT**************SQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEVFS
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SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGRALFAVTNVATEVNSVEQAQKRSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFxxxxxxxxxxxxxxxxxxxxxLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEVFS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query369 2.2.26 [Sep-21-2011]
P93162421 Magnesium-chelatase subun yes no 0.994 0.871 0.913 0.0
Q5XF33418 Magnesium-chelatase subun yes no 0.994 0.877 0.858 1e-179
O22436426 Magnesium-chelatase subun N/A no 0.997 0.863 0.843 1e-177
Q53RM0415 Magnesium-chelatase subun yes no 0.983 0.874 0.854 1e-176
A2XIK9415 Magnesium-chelatase subun N/A no 0.983 0.874 0.851 1e-175
P16127424 Magnesium-chelatase subun no no 0.994 0.865 0.831 1e-174
Q9TL08355 Magnesium-chelatase subun N/A no 0.924 0.960 0.791 1e-157
P56304354 Magnesium-chelatase subun N/A no 0.934 0.974 0.739 1e-151
Q9MUT3360 Magnesium-chelatase subun N/A no 0.959 0.983 0.703 1e-148
Q94FT3417 Magnesium-chelatase subun N/A no 0.918 0.812 0.737 1e-147
>sp|P93162|CHLI_SOYBN Magnesium-chelatase subunit ChlI, chloroplastic OS=Glycine max GN=CHLI PE=2 SV=1 Back     alignment and function desciption
 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/368 (91%), Positives = 349/368 (94%), Gaps = 1/368 (0%)

Query: 3   RALFAVTNVATEVNSVEQAQK-RSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVM 61
           RA  +VTNVATEVNSVEQAQ   SKESQRPVYPF+AIVGQ+EMKLCLLLNVIDPKIGGVM
Sbjct: 54  RAQLSVTNVATEVNSVEQAQSIASKESQRPVYPFSAIVGQDEMKLCLLLNVIDPKIGGVM 113

Query: 62  IMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFS 121
           IMGDRGTGKSTTVRSLVDLLP IKVV GDPYNSDP+DPE MG+EVRE V++GEELS+  +
Sbjct: 114 IMGDRGTGKSTTVRSLVDLLPEIKVVAGDPYNSDPQDPEFMGVEVRERVLQGEELSVVLT 173

Query: 122 KINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVD 181
           KINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVD
Sbjct: 174 KINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVD 233

Query: 182 VLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAE 241
           VLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAE
Sbjct: 234 VLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAE 293

Query: 242 LRVKIVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAE 301
           LRVKIVEER RFDKNPKEFRDSYKAEQ KLQQQI SARS L +VQID DLKVKISKVCAE
Sbjct: 294 LRVKIVEERGRFDKNPKEFRDSYKAEQEKLQQQITSARSVLSSVQIDQDLKVKISKVCAE 353

Query: 302 LNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLII 361
           LNVDGLRGDIV+NRAAKALAALKGRD VSAEDIATV+PNCLRHRLRKDPLESIDSGLL+ 
Sbjct: 354 LNVDGLRGDIVTNRAAKALAALKGRDNVSAEDIATVIPNCLRHRLRKDPLESIDSGLLVT 413

Query: 362 EKFYEVFS 369
           EKFYEVFS
Sbjct: 414 EKFYEVFS 421
Involved in chlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
Glycine max (taxid: 3847)
EC: 6EC: .EC: 6EC: .EC: 1EC: .EC: 1
>sp|Q5XF33|CHLI2_ARATH Magnesium-chelatase subunit ChlI-2, chloroplastic OS=Arabidopsis thaliana GN=CHLI2 PE=1 SV=1 Back     alignment and function description
>sp|O22436|CHLI_TOBAC Magnesium-chelatase subunit ChlI, chloroplastic OS=Nicotiana tabacum GN=CHLI PE=2 SV=1 Back     alignment and function description
>sp|Q53RM0|CHLI_ORYSJ Magnesium-chelatase subunit ChlI, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLI PE=1 SV=1 Back     alignment and function description
>sp|A2XIK9|CHLI_ORYSI Magnesium-chelatase subunit ChlI, chloroplastic OS=Oryza sativa subsp. indica GN=CHLI PE=3 SV=1 Back     alignment and function description
>sp|P16127|CHLI1_ARATH Magnesium-chelatase subunit ChlI-1, chloroplastic OS=Arabidopsis thaliana GN=CHLI1 PE=1 SV=1 Back     alignment and function description
>sp|Q9TL08|CHLI_NEPOL Magnesium-chelatase subunit ChlI OS=Nephroselmis olivacea GN=chlI PE=3 SV=1 Back     alignment and function description
>sp|P56304|CHLI_CHLVU Magnesium-chelatase subunit ChlI OS=Chlorella vulgaris GN=chlI PE=3 SV=1 Back     alignment and function description
>sp|Q9MUT3|CHLI_MESVI Magnesium-chelatase subunit ChlI OS=Mesostigma viride GN=chlI PE=3 SV=1 Back     alignment and function description
>sp|Q94FT3|CHLI_CHLRE Magnesium-chelatase subunit ChlI, chloroplastic OS=Chlamydomonas reinhardtii GN=CHLI PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
224114720420 predicted protein [Populus trichocarpa] 0.997 0.876 0.900 0.0
356549248421 PREDICTED: magnesium-chelatase subunit c 0.994 0.871 0.913 0.0
255646022421 unknown [Glycine max] 0.994 0.871 0.913 0.0
356555398421 PREDICTED: magnesium-chelatase subunit c 0.994 0.871 0.907 0.0
255637781421 unknown [Glycine max] 0.994 0.871 0.904 0.0
225443506426 PREDICTED: magnesium-chelatase subunit c 0.997 0.863 0.897 0.0
356519641414 PREDICTED: magnesium-chelatase subunit c 0.970 0.864 0.916 0.0
118487747417 unknown [Populus trichocarpa] 0.997 0.882 0.886 0.0
356548633421 PREDICTED: magnesium-chelatase subunit c 0.994 0.871 0.897 0.0
357595281422 chloroplast magnesium chelatase I subuni 0.997 0.872 0.894 0.0
>gi|224114720|ref|XP_002316838.1| predicted protein [Populus trichocarpa] gi|222859903|gb|EEE97450.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/371 (90%), Positives = 352/371 (94%), Gaps = 3/371 (0%)

Query: 2   GRALF--AVTNVATEVNSVEQAQK-RSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIG 58
           GR  F  AV  VAT++ SVE+AQK  SKE+QRPVYPF AIVGQ+EMKLCLLLNVIDPKIG
Sbjct: 50  GRPQFHVAVACVATDIGSVEEAQKLASKENQRPVYPFAAIVGQDEMKLCLLLNVIDPKIG 109

Query: 59  GVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSI 118
           GVMIMGDRGTGKSTTVRSLVDLLP IKVV GDPYNSDPEDPE+MGIEVRESVVKGE L++
Sbjct: 110 GVMIMGDRGTGKSTTVRSLVDLLPEIKVVAGDPYNSDPEDPESMGIEVRESVVKGENLTV 169

Query: 119 TFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDH 178
             +KINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDH
Sbjct: 170 VMTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDH 229

Query: 179 LVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVR 238
           LVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVR
Sbjct: 230 LVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVR 289

Query: 239 DAELRVKIVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKV 298
           DAELRVKIVEERARFDKNPKEFR SYKAEQ KL+QQIASAR+ L +VQIDHDLKVKISKV
Sbjct: 290 DAELRVKIVEERARFDKNPKEFRHSYKAEQEKLRQQIASARACLSSVQIDHDLKVKISKV 349

Query: 299 CAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGL 358
           CAELNVDGLRGDIV+NRAAK+LAALKGRD+V+AEDIATV+PNCLRHRLRKDPLESIDSGL
Sbjct: 350 CAELNVDGLRGDIVTNRAAKSLAALKGRDQVTAEDIATVIPNCLRHRLRKDPLESIDSGL 409

Query: 359 LIIEKFYEVFS 369
           L+IEKFYEVFS
Sbjct: 410 LVIEKFYEVFS 420

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356549248|ref|XP_003543008.1| PREDICTED: magnesium-chelatase subunit chlI, chloroplastic-like [Glycine max] gi|3334150|sp|P93162.1|CHLI_SOYBN RecName: Full=Magnesium-chelatase subunit ChlI, chloroplastic; Short=Mg-chelatase subunit I-1; AltName: Full=Mg-protoporphyrin IX chelatase subunit ChlI; Flags: Precursor gi|1732469|dbj|BAA08291.1| Mg chelatase subunit (46 kD) [Glycine max] Back     alignment and taxonomy information
>gi|255646022|gb|ACU23498.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356555398|ref|XP_003546019.1| PREDICTED: magnesium-chelatase subunit chlI, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255637781|gb|ACU19212.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|225443506|ref|XP_002276262.1| PREDICTED: magnesium-chelatase subunit chlI, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356519641|ref|XP_003528479.1| PREDICTED: magnesium-chelatase subunit chlI, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|118487747|gb|ABK95697.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356548633|ref|XP_003542705.1| PREDICTED: magnesium-chelatase subunit chlI, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357595281|gb|AET86637.1| chloroplast magnesium chelatase I subunit [Pisum sativum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
TAIR|locus:2152405418 CHLI2 "magnesium chelatase i2" 0.983 0.868 0.799 1.1e-149
TAIR|locus:2005500424 CHLI1 [Arabidopsis thaliana (t 0.983 0.856 0.767 9.3e-146
UNIPROTKB|Q4KAH8335 bchI "Magnesium chelatase, sub 0.693 0.764 0.375 2.9e-54
TAIR|locus:2201796 760 ALB1 "ALBINA 1" [Arabidopsis t 0.823 0.4 0.347 1.9e-41
TAIR|locus:2152405 CHLI2 "magnesium chelatase i2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1461 (519.4 bits), Expect = 1.1e-149, P = 1.1e-149
 Identities = 291/364 (79%), Positives = 313/364 (85%)

Query:     7 AVTNVATEVNSVEQAQK-RSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGD 65
             +V NVATE+NSVEQA+K  SKES RPVYPF AIVGQ+EMKLCLLLNVIDPKIGGVMIMGD
Sbjct:    55 SVMNVATEINSVEQAKKIDSKESARPVYPFAAIVGQDEMKLCLLLNVIDPKIGGVMIMGD 114

Query:    66 RGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINM 125
             RGTGKSTTVRSLVDLLP I VV GDPYNSDP DPE MG EVRE V KGEELS+  +KINM
Sbjct:   115 RGTGKSTTVRSLVDLLPEITVVSGDPYNSDPRDPECMGKEVREKVQKGEELSVIETKINM 174

Query:   126 VDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYXXXXXXXXXXXXXXXXX 185
             VDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILY                 
Sbjct:   175 VDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLD 234

Query:   186 SAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVK 245
             SAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVK
Sbjct:   235 SAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVK 294

Query:   246 IVEERARFDKNPKEFRDSYKAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVD 305
             IVEERARFD NPKEFR++Y+ EQ KLQ+QI +ARS+L AVQID DLKVKISKVCAEL+VD
Sbjct:   295 IVEERARFDSNPKEFRETYQEEQLKLQEQITTARSNLSAVQIDQDLKVKISKVCAELDVD 354

Query:   306 GLRGDIVSNRXXXXXXXXXGRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFY 365
             GLRGD+V NR         GRD+V+AED+  V+PNCLRHRLRKDPLES+DSG+L+ EKFY
Sbjct:   355 GLRGDMVINRAARALAALQGRDQVTAEDVGIVIPNCLRHRLRKDPLESMDSGILVTEKFY 414

Query:   366 EVFS 369
             EVF+
Sbjct:   415 EVFT 418
GO:0000166 "nucleotide binding" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;ISS;IDA
GO:0015979 "photosynthesis" evidence=IEA
GO:0015995 "chlorophyll biosynthetic process" evidence=IEA;ISS;IMP;TAS
GO:0016851 "magnesium chelatase activity" evidence=IEA;ISS
GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0010007 "magnesium chelatase complex" evidence=NAS;TAS
GO:0016887 "ATPase activity" evidence=IDA
GO:0010103 "stomatal complex morphogenesis" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
TAIR|locus:2005500 CHLI1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KAH8 bchI "Magnesium chelatase, subunit BchI" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
TAIR|locus:2201796 ALB1 "ALBINA 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5XF33CHLI2_ARATH6, ., 6, ., 1, ., 10.85860.99450.8779yesno
Q9MUT3CHLI_MESVI6, ., 6, ., 1, ., 10.70330.95930.9833N/Ano
Q53RM0CHLI_ORYSJ6, ., 6, ., 1, ., 10.85430.98370.8746yesno
P51394CHLI_PORPU6, ., 6, ., 1, ., 10.68870.94030.9747N/Ano
O30819BCHI_RHOS46, ., 6, ., 1, ., 10.52140.85360.9431yesno
P56304CHLI_CHLVU6, ., 6, ., 1, ., 10.73930.93490.9745N/Ano
Q1XD93CHLI_PORYE6, ., 6, ., 1, ., 10.67630.93760.9746N/Ano
P49469CHLI_ODOSI6, ., 6, ., 1, ., 10.70840.92950.9716N/Ano
P58571CHLI_NOSS16, ., 6, ., 1, ., 10.71670.93760.9251yesno
Q9TL08CHLI_NEPOL6, ., 6, ., 1, ., 10.79130.92410.9605N/Ano
Q32742CHLI_OLILU6, ., 6, ., 1, ., 10.65880.89150.9850N/Ano
Q93SW1BCHI_CHLTE6, ., 6, ., 1, ., 10.59750.87530.8239yesno
P51634CHLI_SYNY36, ., 6, ., 1, ., 10.73970.92680.9579N/Ano
Q06J65CHLI_BIGNA6, ., 6, ., 1, ., 10.66370.91860.9287N/Ano
P26239BCHI_RHOCB6, ., 6, ., 1, ., 10.50600.88070.9285yesno
Q94FT3CHLI_CHLRE6, ., 6, ., 1, ., 10.73740.91860.8129N/Ano
Q58321Y911_METJANo assigned EC number0.54200.86170.8712yesno
P31205CHLI_EUGGR6, ., 6, ., 1, ., 10.70630.93220.9885N/Ano
Q44498CHLI_ANAVA6, ., 6, ., 1, ., 10.72060.85360.9319yesno
P48101CHLI_CYAPA6, ., 6, ., 1, ., 10.70050.93220.9913N/Ano
P16127CHLI1_ARATH6, ., 6, ., 1, ., 10.83190.99450.8655nono
A2XIK9CHLI_ORYSI6, ., 6, ., 1, ., 10.85160.98370.8746N/Ano
Q9WXA9BCHI_ACIRU6, ., 6, ., 1, ., 10.51180.91320.9768N/Ano
Q39516CHLI_GUITH6, ., 6, ., 1, ., 10.69270.93490.9773yesno
P93162CHLI_SOYBN6, ., 6, ., 1, ., 10.91300.99450.8717yesno
O22436CHLI_TOBAC6, ., 6, ., 1, ., 10.84360.99720.8638N/Ano
Q9TLX7CHLI_CYACA6, ., 6, ., 1, ., 10.64980.91320.9546N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.6.1.10.994
3rd Layer6.6.10.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
CHL00081350 CHL00081, chlI, Mg-protoporyphyrin IX chelatase 0.0
TIGR02030337 TIGR02030, BchI-ChlI, magnesium chelatase ATPase s 1e-174
COG1239423 COG1239, ChlI, Mg-chelatase subunit ChlI [Coenzyme 1e-149
TIGR02442 633 TIGR02442, Cob-chelat-sub, cobaltochelatase subuni 1e-145
PRK13407334 PRK13407, bchI, magnesium chelatase subunit I; Pro 1e-123
TIGR02031 589 TIGR02031, BchD-ChlD, magnesium chelatase ATPase s 5e-58
PRK13406 584 PRK13406, bchD, magnesium chelatase subunit D; Pro 8e-18
COG0714329 COG0714, COG0714, MoxR-like ATPases [General funct 5e-12
COG0606490 COG0606, COG0606, Predicted ATPase with chaperone 4e-06
cd00009151 cd00009, AAA, The AAA+ (ATPases Associated with a 1e-05
PRK09862506 PRK09862, PRK09862, putative ATP-dependent proteas 1e-04
COG1067 647 COG1067, LonB, Predicted ATP-dependent protease [P 1e-04
TIGR02903 615 TIGR02903, spore_lon_C, ATP-dependent protease, Lo 1e-04
TIGR00764 608 TIGR00764, lon_rel, lon-related putative ATP-depen 1e-04
smart00382148 smart00382, AAA, ATPases associated with a variety 5e-04
TIGR00368499 TIGR00368, TIGR00368, Mg chelatase-related protein 7e-04
pfam01078207 pfam01078, Mg_chelatase, Magnesium chelatase, subu 0.001
>gnl|CDD|177020 CHL00081, chlI, Mg-protoporyphyrin IX chelatase Back     alignment and domain information 
 Score =  677 bits (1749), Expect = 0.0
 Identities = 257/345 (74%), Positives = 299/345 (86%)

Query: 25  SKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVI 84
            K+ +RPV+PFTAIVGQEEMKL L+LNVIDPKIGGVMIMGDRGTGKSTT+R+LVDLLP I
Sbjct: 6   LKKKERPVFPFTAIVGQEEMKLALILNVIDPKIGGVMIMGDRGTGKSTTIRALVDLLPEI 65

Query: 85  KVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIE 144
           +VV  DP+NS P DPE M  EVRE++  GE +     KI MVDLPLGATEDRVCGTIDIE
Sbjct: 66  EVVKDDPFNSHPSDPELMSDEVREAIQNGETIETEKIKIPMVDLPLGATEDRVCGTIDIE 125

Query: 145 KALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHP 204
           KALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVD+LLDSAASGWNTVEREGISI HP
Sbjct: 126 KALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHP 185

Query: 205 ARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSY 264
           ARF+L+GSGNPEEGELRPQLLDRFGMHA++ TV+D ELRVKIVE+R  FDKNP+EFR+ Y
Sbjct: 186 ARFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPELRVKIVEQRTSFDKNPQEFREKY 245

Query: 265 KAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALK 324
           +  Q +L+ +I +A++ LP V+ID+DL+VKIS++C+EL+VDGLRGDIV+NRAAKALAA +
Sbjct: 246 EESQEELRSKIVAAQNLLPKVEIDYDLRVKISQICSELDVDGLRGDIVTNRAAKALAAFE 305

Query: 325 GRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEVFS 369
           GR +V+ +DI  V+  CLRHRLRKDPLESIDSG  + + F EVF 
Sbjct: 306 GRTEVTPKDIFKVITLCLRHRLRKDPLESIDSGDKVQKVFKEVFG 350

Length = 350
>gnl|CDD|131085 TIGR02030, BchI-ChlI, magnesium chelatase ATPase subunit I Back     alignment and domain information
>gnl|CDD|224160 COG1239, ChlI, Mg-chelatase subunit ChlI [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|233870 TIGR02442, Cob-chelat-sub, cobaltochelatase subunit Back     alignment and domain information
>gnl|CDD|184036 PRK13407, bchI, magnesium chelatase subunit I; Provisional Back     alignment and domain information
>gnl|CDD|233692 TIGR02031, BchD-ChlD, magnesium chelatase ATPase subunit D Back     alignment and domain information
>gnl|CDD|237378 PRK13406, bchD, magnesium chelatase subunit D; Provisional Back     alignment and domain information
>gnl|CDD|223786 COG0714, COG0714, MoxR-like ATPases [General function prediction only] Back     alignment and domain information
>gnl|CDD|223679 COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|99707 cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>gnl|CDD|182120 PRK09862, PRK09862, putative ATP-dependent protease; Provisional Back     alignment and domain information
>gnl|CDD|223994 COG1067, LonB, Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|234053 TIGR02903, spore_lon_C, ATP-dependent protease, Lon family Back     alignment and domain information
>gnl|CDD|233120 TIGR00764, lon_rel, lon-related putative ATP-dependent protease Back     alignment and domain information
>gnl|CDD|214640 smart00382, AAA, ATPases associated with a variety of cellular activities Back     alignment and domain information
>gnl|CDD|129465 TIGR00368, TIGR00368, Mg chelatase-related protein Back     alignment and domain information
>gnl|CDD|144608 pfam01078, Mg_chelatase, Magnesium chelatase, subunit ChlI Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 369
CHL00081350 chlI Mg-protoporyphyrin IX chelatase 100.0
TIGR02030337 BchI-ChlI magnesium chelatase ATPase subunit I. Th 100.0
COG1239423 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolis 100.0
PRK13407334 bchI magnesium chelatase subunit I; Provisional 100.0
TIGR02442 633 Cob-chelat-sub cobaltochelatase subunit. A number 100.0
TIGR02031 589 BchD-ChlD magnesium chelatase ATPase subunit D. Th 100.0
PRK13406 584 bchD magnesium chelatase subunit D; Provisional 100.0
PRK13531 498 regulatory ATPase RavA; Provisional 99.97
COG0606490 Predicted ATPase with chaperone activity [Posttran 99.97
PRK09862506 putative ATP-dependent protease; Provisional 99.97
TIGR00368499 Mg chelatase-related protein. The N-terminal end m 99.96
PF01078206 Mg_chelatase: Magnesium chelatase, subunit ChlI; I 99.95
COG0714329 MoxR-like ATPases [General function prediction onl 99.95
smart00350509 MCM minichromosome maintenance proteins. 99.94
COG2255332 RuvB Holliday junction resolvasome, helicase subun 99.9
PTZ00111915 DNA replication licensing factor MCM4; Provisional 99.9
PF05496233 RuvB_N: Holliday junction DNA helicase ruvB N-term 99.9
TIGR02640262 gas_vesic_GvpN gas vesicle protein GvpN. Members o 99.89
PF00493331 MCM: MCM2/3/5 family This family extends the MCM d 99.89
KOG0480764 consensus DNA replication licensing factor, MCM6 c 99.88
TIGR01650327 PD_CobS cobaltochelatase, CobS subunit. This model 99.88
KOG0482721 consensus DNA replication licensing factor, MCM7 c 99.88
PF07726131 AAA_3: ATPase family associated with various cellu 99.87
COG1241682 MCM2 Predicted ATPase involved in replication cont 99.87
TIGR02902 531 spore_lonB ATP-dependent protease LonB. Members of 99.87
KOG0478804 consensus DNA replication licensing factor, MCM4 c 99.82
COG3829560 RocR Transcriptional regulator containing PAS, AAA 99.81
COG1222406 RPT1 ATP-dependent 26S proteasome regulatory subun 99.78
COG3604550 FhlA Transcriptional regulator containing GAF, AAA 99.77
TIGR00764 608 lon_rel lon-related putative ATP-dependent proteas 99.77
COG1223368 Predicted ATPase (AAA+ superfamily) [General funct 99.77
PRK14956 484 DNA polymerase III subunits gamma and tau; Provisi 99.76
PRK00080328 ruvB Holliday junction DNA helicase RuvB; Reviewed 99.76
TIGR00635305 ruvB Holliday junction DNA helicase, RuvB subunit. 99.76
PRK07003 830 DNA polymerase III subunits gamma and tau; Validat 99.75
COG2256 436 MGS1 ATPase related to the helicase subunit of the 99.75
PRK14958 509 DNA polymerase III subunits gamma and tau; Provisi 99.74
PRK14960 702 DNA polymerase III subunits gamma and tau; Provisi 99.74
COG2204464 AtoC Response regulator containing CheY-like recei 99.73
COG2812 515 DnaX DNA polymerase III, gamma/tau subunits [DNA r 99.73
PRK12323 700 DNA polymerase III subunits gamma and tau; Provisi 99.72
KOG0477854 consensus DNA replication licensing factor, MCM2 c 99.72
PRK14949 944 DNA polymerase III subunits gamma and tau; Provisi 99.71
TIGR02903 615 spore_lon_C ATP-dependent protease, Lon family. Me 99.7
PRK07994 647 DNA polymerase III subunits gamma and tau; Validat 99.7
PRK14961363 DNA polymerase III subunits gamma and tau; Provisi 99.7
PF07728139 AAA_5: AAA domain (dynein-related subfamily); Inte 99.69
PRK08691 709 DNA polymerase III subunits gamma and tau; Validat 99.69
KOG0738491 consensus AAA+-type ATPase [Posttranslational modi 99.69
PRK05342412 clpX ATP-dependent protease ATP-binding subunit Cl 99.69
COG0466 782 Lon ATP-dependent Lon protease, bacterial type [Po 99.68
PRK14964 491 DNA polymerase III subunits gamma and tau; Provisi 99.68
KOG0481729 consensus DNA replication licensing factor, MCM5 c 99.68
COG1221403 PspF Transcriptional regulators containing an AAA- 99.68
PRK14962 472 DNA polymerase III subunits gamma and tau; Provisi 99.67
PRK13765 637 ATP-dependent protease Lon; Provisional 99.67
PRK06645 507 DNA polymerase III subunits gamma and tau; Validat 99.67
PRK14969 527 DNA polymerase III subunits gamma and tau; Provisi 99.66
PRK03992389 proteasome-activating nucleotidase; Provisional 99.66
PRK14951 618 DNA polymerase III subunits gamma and tau; Provisi 99.66
KOG0479 818 consensus DNA replication licensing factor, MCM3 c 99.66
PRK14957 546 DNA polymerase III subunits gamma and tau; Provisi 99.65
PLN03025319 replication factor C subunit; Provisional 99.65
TIGR00382413 clpX endopeptidase Clp ATP-binding regulatory subu 99.65
KOG0734 752 consensus AAA+-type ATPase containing the peptidas 99.65
KOG0989346 consensus Replication factor C, subunit RFC4 [Repl 99.64
PTZ00454398 26S protease regulatory subunit 6B-like protein; P 99.64
PRK05563 559 DNA polymerase III subunits gamma and tau; Validat 99.64
PHA02244383 ATPase-like protein 99.64
PRK08451 535 DNA polymerase III subunits gamma and tau; Validat 99.63
PRK14952 584 DNA polymerase III subunits gamma and tau; Provisi 99.63
KOG0730693 consensus AAA+-type ATPase [Posttranslational modi 99.63
COG1224450 TIP49 DNA helicase TIP49, TBP-interacting protein 99.63
TIGR01242364 26Sp45 26S proteasome subunit P45 family. Many pro 99.63
TIGR02974329 phageshock_pspF psp operon transcriptional activat 99.63
KOG2004 906 consensus Mitochondrial ATP-dependent protease PIM 99.63
TIGR02881261 spore_V_K stage V sporulation protein K. Members o 99.63
TIGR02329526 propionate_PrpR propionate catabolism operon regul 99.62
KOG2028 554 consensus ATPase related to the helicase subunit o 99.62
PRK14965 576 DNA polymerase III subunits gamma and tau; Provisi 99.61
PTZ00361438 26 proteosome regulatory subunit 4-like protein; P 99.61
PRK07764 824 DNA polymerase III subunits gamma and tau; Validat 99.61
PRK15424538 propionate catabolism operon regulatory protein Pr 99.61
TIGR01241 495 FtsH_fam ATP-dependent metalloprotease FtsH. HflB( 99.6
KOG0991333 consensus Replication factor C, subunit RFC2 [Repl 99.6
TIGR02639 731 ClpA ATP-dependent Clp protease ATP-binding subuni 99.59
TIGR01817534 nifA Nif-specific regulatory protein. This model r 99.59
PRK10787 784 DNA-binding ATP-dependent protease La; Provisional 99.58
PRK11034758 clpA ATP-dependent Clp protease ATP-binding subuni 99.58
CHL00176 638 ftsH cell division protein; Validated 99.58
PRK14959 624 DNA polymerase III subunits gamma and tau; Provisi 99.58
PRK05022509 anaerobic nitric oxide reductase transcription reg 99.58
COG0542786 clpA ATP-binding subunits of Clp protease and DnaK 99.58
PRK05896 605 DNA polymerase III subunits gamma and tau; Validat 99.57
PRK13342 413 recombination factor protein RarA; Reviewed 99.57
smart00763361 AAA_PrkA PrkA AAA domain. This is a family of PrkA 99.57
CHL00195489 ycf46 Ycf46; Provisional 99.57
PRK09111 598 DNA polymerase III subunits gamma and tau; Validat 99.57
PRK11608326 pspF phage shock protein operon transcriptional ac 99.57
PRK14963 504 DNA polymerase III subunits gamma and tau; Provisi 99.57
TIGR00763 775 lon ATP-dependent protease La. This protein is ind 99.56
PRK07133 725 DNA polymerase III subunits gamma and tau; Validat 99.56
PRK06647 563 DNA polymerase III subunits gamma and tau; Validat 99.56
KOG0731 774 consensus AAA+-type ATPase containing the peptidas 99.55
PF00158168 Sigma54_activat: Sigma-54 interaction domain; Inte 99.55
PRK14953 486 DNA polymerase III subunits gamma and tau; Provisi 99.55
PRK11388638 DNA-binding transcriptional regulator DhaR; Provis 99.55
CHL00181287 cbbX CbbX; Provisional 99.54
KOG1942456 consensus DNA helicase, TBP-interacting protein [R 99.53
PRK13341 725 recombination factor protein RarA/unknown domain f 99.53
CHL00206 2281 ycf2 Ycf2; Provisional 99.52
PRK14955 397 DNA polymerase III subunits gamma and tau; Provisi 99.51
PRK10820520 DNA-binding transcriptional regulator TyrR; Provis 99.51
PRK15429686 formate hydrogenlyase transcriptional activator Fh 99.5
TIGR03345 852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 99.5
TIGR02880284 cbbX_cfxQ probable Rubsico expression protein CbbX 99.5
TIGR02639731 ClpA ATP-dependent Clp protease ATP-binding subuni 99.49
PRK00440319 rfc replication factor C small subunit; Reviewed 99.49
PRK05201443 hslU ATP-dependent protease ATP-binding subunit Hs 99.49
PRK14950 585 DNA polymerase III subunits gamma and tau; Provisi 99.49
PRK12402337 replication factor C small subunit 2; Reviewed 99.48
TIGR00390441 hslU ATP-dependent protease HslVU, ATPase subunit. 99.48
PRK11034 758 clpA ATP-dependent Clp protease ATP-binding subuni 99.48
KOG0652424 consensus 26S proteasome regulatory complex, ATPas 99.47
PRK06305 451 DNA polymerase III subunits gamma and tau; Validat 99.47
KOG0727408 consensus 26S proteasome regulatory complex, ATPas 99.47
PRK11331459 5-methylcytosine-specific restriction enzyme subun 99.46
PRK14954 620 DNA polymerase III subunits gamma and tau; Provisi 99.46
KOG0742630 consensus AAA+-type ATPase [Posttranslational modi 99.46
KOG0733802 consensus Nuclear AAA ATPase (VCP subfamily) [Post 99.46
KOG0728404 consensus 26S proteasome regulatory complex, ATPas 99.46
PHA02544316 44 clamp loader, small subunit; Provisional 99.46
TIGR02928365 orc1/cdc6 family replication initiation protein. M 99.46
TIGR01243733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 99.45
PRK14970 367 DNA polymerase III subunits gamma and tau; Provisi 99.45
COG0465 596 HflB ATP-dependent Zn proteases [Posttranslational 99.44
COG1219408 ClpX ATP-dependent protease Clp, ATPase subunit [P 99.44
TIGR03689512 pup_AAA proteasome ATPase. In the Actinobacteria, 99.44
TIGR02397355 dnaX_nterm DNA polymerase III, subunit gamma and t 99.44
PTZ00112 1164 origin recognition complex 1 protein; Provisional 99.44
PF06068398 TIP49: TIP49 C-terminus; InterPro: IPR010339 This 99.44
COG5271 4600 MDN1 AAA ATPase containing von Willebrand factor t 99.43
TIGR02915445 PEP_resp_reg putative PEP-CTERM system response re 99.43
PRK14948 620 DNA polymerase III subunits gamma and tau; Provisi 99.42
PRK10923469 glnG nitrogen regulation protein NR(I); Provisiona 99.42
PRK10865857 protein disaggregation chaperone; Provisional 99.42
KOG0733 802 consensus Nuclear AAA ATPase (VCP subfamily) [Post 99.42
COG1126240 GlnQ ABC-type polar amino acid transport system, A 99.42
KOG0736953 consensus Peroxisome assembly factor 2 containing 99.42
COG1474366 CDC6 Cdc6-related protein, AAA superfamily ATPase 99.4
TIGR03345852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 99.4
KOG0737386 consensus AAA+-type ATPase [Posttranslational modi 99.4
PRK14971 614 DNA polymerase III subunits gamma and tau; Provisi 99.4
TIGR03346852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 99.4
PRK11361457 acetoacetate metabolism regulatory protein AtoC; P 99.4
KOG2680454 consensus DNA helicase TIP49, TBP-interacting prot 99.4
CHL00095821 clpC Clp protease ATP binding subunit 99.4
PRK06893229 DNA replication initiation factor; Validated 99.39
KOG0739439 consensus AAA+-type ATPase [Posttranslational modi 99.39
PRK08084235 DNA replication initiation factor; Provisional 99.38
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 99.38
PRK04195 482 replication factor C large subunit; Provisional 99.37
PRK07940394 DNA polymerase III subunit delta'; Validated 99.37
TIGR03015269 pepcterm_ATPase putative secretion ATPase, PEP-CTE 99.37
PRK00411394 cdc6 cell division control protein 6; Reviewed 99.37
COG3283511 TyrR Transcriptional regulator of aromatic amino a 99.36
PRK08727233 hypothetical protein; Validated 99.36
PRK08903227 DnaA regulatory inactivator Hda; Validated 99.36
CHL00095 821 clpC Clp protease ATP binding subunit 99.36
PRK10733 644 hflB ATP-dependent metalloprotease; Reviewed 99.34
PRK09112351 DNA polymerase III subunit delta'; Validated 99.34
COG0464494 SpoVK ATPases of the AAA+ class [Posttranslational 99.33
TIGR03346 852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 99.32
PRK15115444 response regulator GlrR; Provisional 99.3
COG1116248 TauB ABC-type nitrate/sulfonate/bicarbonate transp 99.3
PRK06620214 hypothetical protein; Validated 99.3
COG1120258 FepC ABC-type cobalamin/Fe3+-siderophores transpor 99.29
KOG0745564 consensus Putative ATP-dependent Clp-type protease 99.28
PRK00149450 dnaA chromosomal replication initiation protein; R 99.28
KOG0744423 consensus AAA+-type ATPase [Posttranslational modi 99.27
KOG0726440 consensus 26S proteasome regulatory complex, ATPas 99.26
PRK10865 857 protein disaggregation chaperone; Provisional 99.26
TIGR01818463 ntrC nitrogen regulation protein NR(I). This model 99.26
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 99.25
PRK09087226 hypothetical protein; Validated 99.24
PRK10365441 transcriptional regulatory protein ZraR; Provision 99.24
TIGR00362405 DnaA chromosomal replication initiator protein Dna 99.22
COG1125309 OpuBA ABC-type proline/glycine betaine transport s 99.22
PRK07471365 DNA polymerase III subunit delta'; Validated 99.21
PRK14088440 dnaA chromosomal replication initiation protein; P 99.21
COG2884223 FtsE Predicted ATPase involved in cell division [C 99.2
PRK14087450 dnaA chromosomal replication initiation protein; P 99.19
TIGR01243 733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 99.19
PF00004132 AAA: ATPase family associated with various cellula 99.19
PF07724171 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR 99.19
PLN00020413 ribulose bisphosphate carboxylase/oxygenase activa 99.19
PRK12422445 chromosomal replication initiation protein; Provis 99.19
COG3284606 AcoR Transcriptional activator of acetoin/glycerol 99.18
COG1220444 HslU ATP-dependent protease HslVU (ClpYQ), ATPase 99.18
COG4555245 NatA ABC-type Na+ transport system, ATPase compone 99.18
PRK14086617 dnaA chromosomal replication initiation protein; P 99.18
COG1131293 CcmA ABC-type multidrug transport system, ATPase c 99.15
COG1121254 ZnuC ABC-type Mn/Zn transport systems, ATPase comp 99.15
COG3839338 MalK ABC-type sugar transport systems, ATPase comp 99.15
COG1124252 DppF ABC-type dipeptide/oligopeptide/nickel transp 99.14
COG1117253 PstB ABC-type phosphate transport system, ATPase c 99.14
COG5271 4600 MDN1 AAA ATPase containing von Willebrand factor t 99.13
COG3842352 PotA ABC-type spermidine/putrescine transport syst 99.1
COG0410237 LivF ABC-type branched-chain amino acid transport 99.09
PRK05642234 DNA replication initiation factor; Validated 99.07
COG1136226 SalX ABC-type antimicrobial peptide transport syst 99.07
TIGR01188302 drrA daunorubicin resistance ABC transporter ATP-b 99.06
COG3638258 ABC-type phosphate/phosphonate transport system, A 99.06
PRK13536340 nodulation factor exporter subunit NodI; Provision 99.05
PRK13537306 nodulation ABC transporter NodI; Provisional 99.04
COG1127263 Ttg2A ABC-type transport system involved in resist 99.04
KOG0740428 consensus AAA+-type ATPase [Posttranslational modi 99.04
COG4586325 ABC-type uncharacterized transport system, ATPase 99.03
cd03266218 ABC_NatA_sodium_exporter NatA is the ATPase compon 99.02
PF05673249 DUF815: Protein of unknown function (DUF815); Inte 99.02
cd03231201 ABC_CcmA_heme_exporter CcmA, the ATP-binding compo 99.02
cd03230173 ABC_DR_subfamily_A This family of ATP-binding prot 99.02
cd03265220 ABC_DrrA DrrA is the ATP-binding protein component 99.02
COG4604252 CeuD ABC-type enterochelin transport system, ATPas 99.02
TIGR02315243 ABC_phnC phosphonate ABC transporter, ATP-binding 99.02
PRK13538204 cytochrome c biogenesis protein CcmA; Provisional 99.01
cd03259213 ABC_Carb_Solutes_like ABC Carbohydrate and Solute 99.01
cd03264211 ABC_drug_resistance_like ABC-type multidrug transp 99.01
cd03261235 ABC_Org_Solvent_Resistant ABC (ATP-binding cassett 99.01
PF13177162 DNA_pol3_delta2: DNA polymerase III, delta subunit 99.01
cd03226205 ABC_cobalt_CbiO_domain2 Domain II of the ABC compo 99.01
PRK08058329 DNA polymerase III subunit delta'; Validated 99.01
cd03263220 ABC_subfamily_A The ABCA subfamily mediates the tr 99.0
PRK05564313 DNA polymerase III subunit delta'; Validated 99.0
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 99.0
cd03229178 ABC_Class3 This class is comprised of all BPD (Bin 99.0
TIGR01288303 nodI ATP-binding ABC transporter family nodulation 99.0
cd03255218 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of 99.0
KOG0735952 consensus AAA+-type ATPase [Posttranslational modi 99.0
PRK09493240 glnQ glutamine ABC transporter ATP-binding protein 98.99
COG0542 786 clpA ATP-binding subunits of Clp protease and DnaK 98.99
TIGR03522301 GldA_ABC_ATP gliding motility-associated ABC trans 98.99
TIGR03864236 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, 98.99
KOG0729435 consensus 26S proteasome regulatory complex, ATPas 98.99
cd03268208 ABC_BcrA_bacitracin_resist The BcrA subfamily repr 98.99
COG4598256 HisP ABC-type histidine transport system, ATPase c 98.99
cd03262213 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- 98.99
PRK13540200 cytochrome c biogenesis protein CcmA; Provisional 98.99
PRK07399314 DNA polymerase III subunit delta'; Validated 98.99
PRK11247257 ssuB aliphatic sulfonates transport ATP-binding su 98.99
cd03256241 ABC_PhnC_transporter ABC-type phosphate/phosphonat 98.98
TIGR01189198 ccmA heme ABC exporter, ATP-binding protein CcmA. 98.98
cd03214180 ABC_Iron-Siderophores_B12_Hemin ABC transporters, 98.97
cd03269210 ABC_putative_ATPase This subfamily is involved in 98.97
KOG2035351 consensus Replication factor C, subunit RFC3 [Cell 98.97
cd03296239 ABC_CysA_sulfate_importer Part of the ABC transpor 98.96
cd03293220 ABC_NrtD_SsuB_transporters NrtD and SsuB are the A 98.96
cd03225211 ABC_cobalt_CbiO_domain1 Domain I of the ABC compon 98.96
TIGR00960216 3a0501s02 Type II (General) Secretory Pathway (IIS 98.96
TIGR02673214 FtsE cell division ATP-binding protein FtsE. This 98.96
PRK11650356 ugpC glycerol-3-phosphate transporter ATP-binding 98.96
TIGR00678188 holB DNA polymerase III, delta' subunit. At positi 98.96
cd03235213 ABC_Metallic_Cations ABC component of the metal-ty 98.96
cd03219236 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans 98.96
cd03301213 ABC_MalK_N The N-terminal ATPase domain of the mal 98.96
COG4987573 CydC ABC-type transport system involved in cytochr 98.96
TIGR01166190 cbiO cobalt transport protein ATP-binding subunit. 98.95
KOG0651388 consensus 26S proteasome regulatory complex, ATPas 98.95
TIGR03608206 L_ocin_972_ABC putative bacteriocin export ABC tra 98.95
COG1067 647 LonB Predicted ATP-dependent protease [Posttransla 98.94
PRK13539207 cytochrome c biogenesis protein CcmA; Provisional 98.94
cd03258233 ABC_MetN_methionine_transporter MetN (also known a 98.94
PRK04132846 replication factor C small subunit; Provisional 98.94
cd03224222 ABC_TM1139_LivF_branched LivF (TM1139) is part of 98.94
TIGR03265353 PhnT2 putative 2-aminoethylphosphonate ABC transpo 98.94
PRK11432351 fbpC ferric transporter ATP-binding subunit; Provi 98.94
TIGR03410230 urea_trans_UrtE urea ABC transporter, ATP-binding 98.94
COG0593408 DnaA ATPase involved in DNA replication initiation 98.93
COG1118345 CysA ABC-type sulfate/molybdate transport systems, 98.93
PRK13543214 cytochrome c biogenesis protein CcmA; Provisional 98.93
COG4133209 CcmA ABC-type transport system involved in cytochr 98.93
cd03218232 ABC_YhbG The ABC transporters belonging to the Yhb 98.93
PRK10908222 cell division protein FtsE; Provisional 98.93
PRK10253265 iron-enterobactin transporter ATP-binding protein; 98.93
PRK09452375 potA putrescine/spermidine ABC transporter ATPase 98.92
cd03246173 ABCC_Protease_Secretion This family represents the 98.92
PRK11000369 maltose/maltodextrin transporter ATP-binding prote 98.92
cd03233202 ABC_PDR_domain1 The pleiotropic drug resistance (P 98.92
PRK09536402 btuD corrinoid ABC transporter ATPase; Reviewed 98.92
cd03228171 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein 98.92
COG1119257 ModF ABC-type molybdenum transport system, ATPase 98.91
PRK10895241 lipopolysaccharide ABC transporter ATP-binding pro 98.91
COG2274709 SunT ABC-type bacteriocin/lantibiotic exporters, c 98.91
PRK11248255 tauB taurine transporter ATP-binding subunit; Prov 98.91
cd03247178 ABCC_cytochrome_bd The CYD subfamily implicated in 98.9
TIGR03411242 urea_trans_UrtD urea ABC transporter, ATP-binding 98.9
KOG0743457 consensus AAA+-type ATPase [Posttranslational modi 98.9
cd03294269 ABC_Pro_Gly_Bertaine This family comprises the gly 98.9
COG4559259 ABC-type hemin transport system, ATPase component 98.9
PRK11300255 livG leucine/isoleucine/valine transporter ATP-bin 98.9
TIGR01186363 proV glycine betaine/L-proline transport ATP bindi 98.9
PRK15455 644 PrkA family serine protein kinase; Provisional 98.9
COG0488530 Uup ATPase components of ABC transporters with dup 98.9
cd03292214 ABC_FtsE_transporter FtsE is a hydrophilic nucleot 98.9
TIGR00972247 3a0107s01c2 phosphate ABC transporter, ATP-binding 98.89
cd03216163 ABC_Carb_Monos_I This family represents the domain 98.89
PRK11124242 artP arginine transporter ATP-binding subunit; Pro 98.89
TIGR03005252 ectoine_ehuA ectoine/hydroxyectoine ABC transporte 98.89
TIGR02211221 LolD_lipo_ex lipoprotein releasing system, ATP-bin 98.89
PRK11264250 putative amino-acid ABC transporter ATP-binding pr 98.89
PRK13638271 cbiO cobalt transporter ATP-binding subunit; Provi 98.89
PRK10851353 sulfate/thiosulfate transporter subunit; Provision 98.88
TIGR00602 637 rad24 checkpoint protein rad24. This family is bas 98.88
cd03260227 ABC_PstB_phosphate_transporter Phosphate uptake is 98.88
TIGR03258362 PhnT 2-aminoethylphosphonate ABC transport system, 98.88
PRK10575265 iron-hydroxamate transporter ATP-binding subunit; 98.88
cd03298211 ABC_ThiQ_thiamine_transporter ABC-type thiamine tr 98.88
COG4619223 ABC-type uncharacterized transport system, ATPase 98.87
PRK10247225 putative ABC transporter ATP-binding protein YbbL; 98.87
cd03295242 ABC_OpuCA_Osmoprotection OpuCA is a the ATP bindin 98.87
cd03267236 ABC_NatA_like Similar in sequence to NatA, this is 98.87
PRK11231255 fecE iron-dicitrate transporter ATP-binding subuni 98.86
PRK14250241 phosphate ABC transporter ATP-binding protein; Pro 98.86
PRK11629233 lolD lipoprotein transporter ATP-binding subunit; 98.86
cd03213194 ABCG_EPDR ABCG transporters are involved in eye pi 98.86
PF14532138 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 98.86
TIGR03740223 galliderm_ABC gallidermin-class lantibiotic protec 98.86
PRK11607377 potG putrescine transporter ATP-binding subunit; P 98.85
PRK11614237 livF leucine/isoleucine/valine transporter ATP-bin 98.85
COG1122235 CbiO ABC-type cobalt transport system, ATPase comp 98.85
cd03257228 ABC_NikE_OppD_transporters The ABC transporter sub 98.85
cd03254229 ABCC_Glucan_exporter_like Glucan exporter ATP-bind 98.85
PRK11831269 putative ABC transporter ATP-binding protein YrbF; 98.85
COG4178604 ABC-type uncharacterized transport system, permeas 98.85
PRK09984262 phosphonate/organophosphate ester transporter subu 98.85
PRK09544251 znuC high-affinity zinc transporter ATPase; Review 98.85
PRK10771232 thiQ thiamine transporter ATP-binding subunit; Pro 98.84
PRK10584228 putative ABC transporter ATP-binding protein YbbA; 98.84
PRK13548258 hmuV hemin importer ATP-binding subunit; Provision 98.84
cd03215182 ABC_Carb_Monos_II This family represents domain II 98.84
cd03297214 ABC_ModC_molybdenum_transporter ModC is an ABC-typ 98.84
PRK11153343 metN DL-methionine transporter ATP-binding subunit 98.84
cd03300232 ABC_PotA_N PotA is an ABC-type transporter and the 98.83
COG0411250 LivG ABC-type branched-chain amino acid transport 98.82
PRK13644274 cbiO cobalt transporter ATP-binding subunit; Provi 98.82
PRK05707328 DNA polymerase III subunit delta'; Validated 98.82
COG4650531 RtcR Sigma54-dependent transcription regulator con 98.82
PF08298358 AAA_PrkA: PrkA AAA domain; InterPro: IPR013153 Thi 98.81
cd03222177 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi 98.81
KOG0741 744 consensus AAA+-type ATPase [Posttranslational modi 98.81
TIGR01277213 thiQ thiamine ABC transporter, ATP-binding protein 98.81
TIGR02142354 modC_ABC molybdenum ABC transporter, ATP-binding p 98.81
PRK15439 510 autoinducer 2 ABC transporter ATP-binding protein 98.81
PRK14267253 phosphate ABC transporter ATP-binding protein; Pro 98.81
PRK13635279 cbiO cobalt transporter ATP-binding subunit; Provi 98.8
PRK13632271 cbiO cobalt transporter ATP-binding subunit; Provi 98.8
TIGR03873256 F420-0_ABC_ATP proposed F420-0 ABC transporter, AT 98.8
PRK13652277 cbiO cobalt transporter ATP-binding subunit; Provi 98.8
PRK11144352 modC molybdate transporter ATP-binding protein; Pr 98.8
PRK10744260 pstB phosphate transporter ATP-binding protein; Pr 98.8
TIGR02868529 CydC thiol reductant ABC exporter, CydC subunit. T 98.8
PRK14247250 phosphate ABC transporter ATP-binding protein; Pro 98.79
TIGR02314343 ABC_MetN D-methionine ABC transporter, ATP-binding 98.79
TIGR00968237 3a0106s01 sulfate ABC transporter, ATP-binding pro 98.79
PRK13636283 cbiO cobalt transporter ATP-binding subunit; Provi 98.79
PRK13541195 cytochrome c biogenesis protein CcmA; Provisional 98.79
PRK10070400 glycine betaine transporter ATP-binding subunit; P 98.79
PRK13547272 hmuV hemin importer ATP-binding subunit; Provision 98.78
KOG1051898 consensus Chaperone HSP104 and related ATP-depende 98.78
KOG0062 582 consensus ATPase component of ABC transporters wit 98.78
TIGR02982220 heterocyst_DevA ABC exporter ATP-binding subunit, 98.78
PRK14248268 phosphate ABC transporter ATP-binding protein; Pro 98.78
PRK10619257 histidine/lysine/arginine/ornithine transporter su 98.78
PRK10762 501 D-ribose transporter ATP binding protein; Provisio 98.78
PRK11174588 cysteine/glutathione ABC transporter membrane/ATP- 98.78
PRK14273254 phosphate ABC transporter ATP-binding protein; Pro 98.78
cd03245220 ABCC_bacteriocin_exporters ABC-type bacteriocin ex 98.78
PRK13648269 cbiO cobalt transporter ATP-binding subunit; Provi 98.77
COG0470325 HolB ATPase involved in DNA replication [DNA repli 98.77
cd03223166 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass 98.77
COG4152300 ABC-type uncharacterized transport system, ATPase 98.77
KOG0066807 consensus eIF2-interacting protein ABC50 (ABC supe 98.77
PF12774231 AAA_6: Hydrolytic ATP binding site of dynein motor 98.77
cd03248226 ABCC_TAP TAP, the Transporter Associated with Anti 98.77
PRK10938 490 putative molybdenum transport ATP-binding protein 98.77
PRK13637287 cbiO cobalt transporter ATP-binding subunit; Provi 98.77
KOG0058716 consensus Peptide exporter, ABC superfamily [Intra 98.77
PRK09700 510 D-allose transporter ATP-binding protein; Provisio 98.76
PRK14241258 phosphate transporter ATP-binding protein; Provisi 98.76
COG1135339 AbcC ABC-type metal ion transport system, ATPase c 98.76
PRK13657588 cyclic beta-1,2-glucan ABC transporter; Provisiona 98.76
PRK14259269 phosphate ABC transporter ATP-binding protein; Pro 98.76
PF12775272 AAA_7: P-loop containing dynein motor region D3; P 98.76
COG0488 530 Uup ATPase components of ABC transporters with dup 98.76
TIGR01184230 ntrCD nitrate transport ATP-binding subunits C and 98.76
cd03220224 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transpo 98.76
TIGR02203571 MsbA_lipidA lipid A export permease/ATP-binding pr 98.76
COG4148352 ModC ABC-type molybdate transport system, ATPase c 98.76
cd03232192 ABC_PDR_domain2 The pleiotropic drug resistance-li 98.76
cd03217200 ABC_FeS_Assembly ABC-type transport system involve 98.75
PRK13647274 cbiO cobalt transporter ATP-binding subunit; Provi 98.75
TIGR03415382 ABC_choXWV_ATP choline ABC transporter, ATP-bindin 98.75
cd03252237 ABCC_Hemolysin The ABC-transporter hemolysin B is 98.75
KOG1808 1856 consensus AAA ATPase containing von Willebrand fac 98.75
PRK13639275 cbiO cobalt transporter ATP-binding subunit; Provi 98.74
PRK13633280 cobalt transporter ATP-binding subunit; Provisiona 98.74
PRK13650279 cbiO cobalt transporter ATP-binding subunit; Provi 98.74
PRK14242253 phosphate transporter ATP-binding protein; Provisi 98.74
cd03299235 ABC_ModC_like Archeal protein closely related to M 98.74
PRK13640282 cbiO cobalt transporter ATP-binding subunit; Provi 98.74
PRK13549 506 xylose transporter ATP-binding subunit; Provisiona 98.73
cd03251234 ABCC_MsbA MsbA is an essential ABC transporter, cl 98.73
PRK14254285 phosphate ABC transporter ATP-binding protein; Pro 98.73
PRK11176582 lipid transporter ATP-binding/permease protein; Pr 98.73
cd03253236 ABCC_ATM1_transporter ATM1 is an ABC transporter t 98.73
PRK10636 638 putative ABC transporter ATP-binding protein; Prov 98.73
COG4525259 TauB ABC-type taurine transport system, ATPase com 98.73
PRK14270251 phosphate ABC transporter ATP-binding protein; Pro 98.72
KOG0730 693 consensus AAA+-type ATPase [Posttranslational modi 98.72
cd03244221 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. 98.72
PRK10982 491 galactose/methyl galaxtoside transporter ATP-bindi 98.72
PRK14268258 phosphate ABC transporter ATP-binding protein; Pro 98.71
PRK03695248 vitamin B12-transporter ATPase; Provisional 98.71
KOG0732 1080 consensus AAA+-type ATPase containing the bromodom 98.71
cd03369207 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-ty 98.71
PRK14256252 phosphate ABC transporter ATP-binding protein; Pro 98.71
TIGR03796710 NHPM_micro_ABC1 NHPM bacteriocin system ABC transp 98.71
KOG1969 877 consensus DNA replication checkpoint protein CHL12 98.71
PRK15112267 antimicrobial peptide ABC system ATP-binding prote 98.71
PRK14235267 phosphate transporter ATP-binding protein; Provisi 98.71
cd03289275 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic 98.7
cd03221144 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is 98.7
PRK14251251 phosphate ABC transporter ATP-binding protein; Pro 98.7
PRK06871325 DNA polymerase III subunit delta'; Validated 98.7
TIGR02204576 MsbA_rel ABC transporter, permease/ATP-binding pro 98.7
TIGR01978243 sufC FeS assembly ATPase SufC. SufC is part of the 98.7
COG4988559 CydD ABC-type transport system involved in cytochr 98.7
cd03237246 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 o 98.69
TIGR03797686 NHPM_micro_ABC2 NHPM bacteriocin system ABC transp 98.69
PRK14274259 phosphate ABC transporter ATP-binding protein; Pro 98.69
cd03234226 ABCG_White The White subfamily represents ABC tran 98.69
PRK14272252 phosphate ABC transporter ATP-binding protein; Pro 98.68
PRK13634290 cbiO cobalt transporter ATP-binding subunit; Provi 98.68
PRK07993334 DNA polymerase III subunit delta'; Validated 98.68
TIGR02857529 CydD thiol reductant ABC exporter, CydD subunit. U 98.68
COG1123539 ATPase components of various ABC-type transport sy 98.68
PRK14265274 phosphate ABC transporter ATP-binding protein; Pro 98.68
cd03249238 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) 98.68
PRK14249251 phosphate ABC transporter ATP-binding protein; Pro 98.68
PRK13651305 cobalt transporter ATP-binding subunit; Provisiona 98.68
PRK14240250 phosphate transporter ATP-binding protein; Provisi 98.67
PRK15177213 Vi polysaccharide export ATP-binding protein VexC; 98.67
PRK13641287 cbiO cobalt transporter ATP-binding subunit; Provi 98.67
PRK14246257 phosphate ABC transporter ATP-binding protein; Pro 98.67
PRK14244251 phosphate ABC transporter ATP-binding protein; Pro 98.67
TIGR01842544 type_I_sec_PrtD type I secretion system ABC transp 98.67
PRK11701258 phnK phosphonate C-P lyase system protein PhnK; Pr 98.67
TIGR01193708 bacteriocin_ABC ABC-type bacteriocin transporter. 98.67
PRK14243264 phosphate transporter ATP-binding protein; Provisi 98.67
PRK14269246 phosphate ABC transporter ATP-binding protein; Pro 98.67
COG1134249 TagH ABC-type polysaccharide/polyol phosphate tran 98.66
PRK14237267 phosphate transporter ATP-binding protein; Provisi 98.66
cd03290218 ABCC_SUR1_N The SUR domain 1. The sulfonylurea rec 98.66
PRK14260259 phosphate ABC transporter ATP-binding protein; Pro 98.66
PRK14236272 phosphate transporter ATP-binding protein; Provisi 98.66
PRK13646286 cbiO cobalt transporter ATP-binding subunit; Provi 98.65
COG4618580 ArpD ABC-type protease/lipase transport system, AT 98.65
PRK13643288 cbiO cobalt transporter ATP-binding subunit; Provi 98.65
PRK14253249 phosphate ABC transporter ATP-binding protein; Pro 98.65
PRK14258261 phosphate ABC transporter ATP-binding protein; Pro 98.65
cd03236255 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 o 98.65
PRK13546264 teichoic acids export protein ATP-binding subunit; 98.65
cd03250204 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. 98.65
PRK15079331 oligopeptide ABC transporter ATP-binding protein O 98.64
PRK13649280 cbiO cobalt transporter ATP-binding subunit; Provi 98.64
PRK14238271 phosphate transporter ATP-binding protein; Provisi 98.64
PRK11288 501 araG L-arabinose transporter ATP-binding protein; 98.64
PRK15056272 manganese/iron transporter ATP-binding protein; Pr 98.64
COG4608268 AppF ABC-type oligopeptide transport system, ATPas 98.64
PRK14261253 phosphate ABC transporter ATP-binding protein; Pro 98.64
PRK13645289 cbiO cobalt transporter ATP-binding subunit; Provi 98.64
PRK10790592 putative multidrug transporter membrane\ATP-bindin 98.64
PRK14263261 phosphate ABC transporter ATP-binding protein; Pro 98.64
TIGR02323253 CP_lyasePhnK phosphonate C-P lyase system protein 98.64
PRK11819 556 putative ABC transporter ATP-binding protein; Revi 98.64
TIGR03375694 type_I_sec_LssB type I secretion system ATPase, Ls 98.64
PRK14239252 phosphate transporter ATP-binding protein; Provisi 98.63
PRK15064 530 ABC transporter ATP-binding protein; Provisional 98.63
PRK08769319 DNA polymerase III subunit delta'; Validated 98.63
KOG0990360 consensus Replication factor C, subunit RFC5 [Repl 98.63
PRK14275286 phosphate ABC transporter ATP-binding protein; Pro 98.63
PRK10419268 nikE nickel transporter ATP-binding protein NikE; 98.63
TIGR00958711 3a01208 Conjugate Transporter-2 (CT2) Family prote 98.63
PRK13642277 cbiO cobalt transporter ATP-binding subunit; Provi 98.63
TIGR02769265 nickel_nikE nickel import ATP-binding protein NikE 98.62
TIGR02770230 nickel_nikD nickel import ATP-binding protein NikD 98.62
TIGR01192585 chvA glucan exporter ATP-binding protein. This mod 98.62
PRK14264305 phosphate ABC transporter ATP-binding protein; Pro 98.62
PRK11160574 cysteine/glutathione ABC transporter membrane/ATP- 98.62
PRK10789569 putative multidrug transporter membrane\ATP-bindin 98.62
>CHL00081 chlI Mg-protoporyphyrin IX chelatase Back     alignment and domain information 
Probab=100.00  E-value=1.6e-46  Score=347.68  Aligned_cols=345  Identities=74%  Similarity=1.156  Sum_probs=304.3

Q ss_pred             hhhcCCCCCCCccccChHHHHHHhhhhhccCCCCeeEEecCCCCChhHHHHHHHhccCcceeecCCCCCCCCCCcchhhh
Q 017575           25 SKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGI  104 (369)
Q Consensus        25 ~~~~~~~~~~~~~i~G~~~~~~~l~~~l~~~~~g~vlL~Gp~G~GKTtla~~la~~l~~~~~~~~~~~~~~~~~~~~~~~  104 (369)
                      ++.+.++.+.|+.++||++++.++.++.++|..|+++|.||+||||||++|.++.+++......+.+|++++.++....+
T Consensus         6 ~~~~~~~~~pf~~ivGq~~~k~al~~~~~~p~~~~vli~G~~GtGKs~~ar~~~~~l~~~~~~~~~pf~~~p~~p~~~~~   85 (350)
T CHL00081          6 LKKKERPVFPFTAIVGQEEMKLALILNVIDPKIGGVMIMGDRGTGKSTTIRALVDLLPEIEVVKDDPFNSHPSDPELMSD   85 (350)
T ss_pred             hhhccCCCCCHHHHhChHHHHHHHHHhccCCCCCeEEEEcCCCCCHHHHHHHHHHHHhhcCccCCCCCCCCCCChhhhch
Confidence            44566788999999999999999999999988889999999999999999999999987665556688887777777777


Q ss_pred             hhhhhhhccccchhhhhccccccCCCCCchHhhhcccchhHHhhhcccccccchhhhcCCCeEEEeCCCCCCHHHHHHHH
Q 017575          105 EVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLL  184 (369)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~a~~~vl~lDE~~~l~~~~~~~L~  184 (369)
                      .+.+....+....+.....+++.+|.+.+++.++|.+|+..++.+|...+.+|++.+++++++|+||++++++..|+.|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~ted~l~G~iD~~~al~~g~~~~~~GlL~~A~~GiL~lDEInrL~~~~Q~~LL  165 (350)
T CHL00081         86 EVREAIQNGETIETEKIKIPMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDILL  165 (350)
T ss_pred             hhhhhhcccccccceeccccceecCCCCchhhccCcccHHHHhhcCcccccCCeeeecCCCEEEecChHhCCHHHHHHHH
Confidence            66665443333333334467788899999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHhcCCceeeecceeeeecCceEEEeecCCCCCCCCHhHHhhhccceeecCCCCHHHHHHHHHHhhhccCCChHHHhhh
Q 017575          185 DSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSY  264 (369)
Q Consensus       185 ~~l~~~~~~~~~~~~~~~~~~~~~li~t~n~~~~~l~~al~~R~~~~i~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~  264 (369)
                      +.|+++.+++.+.|.+..++.+|++++|.||.++.++++++|||.+++.+.+|...+.+..|+.+...+..++..+...+
T Consensus       166 eam~e~~~~ier~G~s~~~p~rfiviaT~np~eg~l~~~LldRf~l~i~l~~~~~~~~e~~il~~~~~~~~~~~~~~~~~  245 (350)
T CHL00081        166 DSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPELRVKIVEQRTSFDKNPQEFREKY  245 (350)
T ss_pred             HHHHhCCeEEeeCCeeeecCCCEEEEeccCcccCCCCHHHHHHhCceeecCCCCChHHHHHHHHhhhccccChhhhhhhh
Confidence            99999998888889899999999999999998888999999999999999999877889999998765555555665555


Q ss_pred             HHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHcCCCCCchhHHHHHHHHHHHHHcCCCCCCHHHHHHHHhHHhcc
Q 017575          265 KAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRH  344 (369)
Q Consensus       265 ~~~~~~~~~~i~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~s~R~~~~ll~~a~a~A~l~~~~~v~~~~i~~a~~~vl~~  344 (369)
                      ...+..+..+|..++...+.|.+++++..+|.+++...|..|+|+.+.+++.|++.|+++||+.|+++||+.++..|+.|
T Consensus       246 ~~~~~~~~~~I~~ar~~~~~V~v~~~~~~yi~~l~~~~~~~s~Ra~i~l~raArA~Aal~GR~~V~pdDv~~~a~~vL~H  325 (350)
T CHL00081        246 EESQEELRSKIVAAQNLLPKVEIDYDLRVKISQICSELDVDGLRGDIVTNRAAKALAAFEGRTEVTPKDIFKVITLCLRH  325 (350)
T ss_pred             ccccccCHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence            45455688899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCChhHHHHHHHHhhhC
Q 017575          345 RLRKDPLESIDSGLLIIEKFYEVFS  369 (369)
Q Consensus       345 r~~~~~~~~~~~~~~~~~~~~~~~~  369 (369)
                      |+...|..+.+.++.+++++.+.|+
T Consensus       326 R~~~~p~~~~~~~~~~~~~~~~~~~  350 (350)
T CHL00081        326 RLRKDPLESIDSGDKVQKVFKEVFG  350 (350)
T ss_pred             hCcCCcccccCchHHHHHHHHHhcC
Confidence            9999898888888999999998875

>TIGR02030 BchI-ChlI magnesium chelatase ATPase subunit I Back     alignment and domain information
>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] Back     alignment and domain information
>PRK13407 bchI magnesium chelatase subunit I; Provisional Back     alignment and domain information
>TIGR02442 Cob-chelat-sub cobaltochelatase subunit Back     alignment and domain information
>TIGR02031 BchD-ChlD magnesium chelatase ATPase subunit D Back     alignment and domain information
>PRK13406 bchD magnesium chelatase subunit D; Provisional Back     alignment and domain information
>PRK13531 regulatory ATPase RavA; Provisional Back     alignment and domain information
>COG0606 Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09862 putative ATP-dependent protease; Provisional Back     alignment and domain information
>TIGR00368 Mg chelatase-related protein Back     alignment and domain information
>PF01078 Mg_chelatase: Magnesium chelatase, subunit ChlI; InterPro: IPR000523 Magnesium-chelatase is a three-component enzyme that catalyses the insertion of Mg2+ into protoporphyrin IX Back     alignment and domain information
>COG0714 MoxR-like ATPases [General function prediction only] Back     alignment and domain information
>smart00350 MCM minichromosome maintenance proteins Back     alignment and domain information
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>PTZ00111 DNA replication licensing factor MCM4; Provisional Back     alignment and domain information
>PF05496 RuvB_N: Holliday junction DNA helicase ruvB N-terminus; InterPro: IPR008824 The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair Back     alignment and domain information
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN Back     alignment and domain information
>PF00493 MCM: MCM2/3/5 family This family extends the MCM domain of Prosite Back     alignment and domain information
>KOG0480 consensus DNA replication licensing factor, MCM6 component [Replication, recombination and repair] Back     alignment and domain information
>TIGR01650 PD_CobS cobaltochelatase, CobS subunit Back     alignment and domain information
>KOG0482 consensus DNA replication licensing factor, MCM7 component [Replication, recombination and repair] Back     alignment and domain information
>PF07726 AAA_3: ATPase family associated with various cellular activities (AAA); InterPro: IPR011703 This entry includes some of the AAA proteins not detected by the IPR003959 from INTERPRO model Back     alignment and domain information
>COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR02902 spore_lonB ATP-dependent protease LonB Back     alignment and domain information
>KOG0478 consensus DNA replication licensing factor, MCM4 component [Replication, recombination and repair] Back     alignment and domain information
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>COG1222 RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG3604 FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>TIGR00764 lon_rel lon-related putative ATP-dependent protease Back     alignment and domain information
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only] Back     alignment and domain information
>PRK14956 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed Back     alignment and domain information
>TIGR00635 ruvB Holliday junction DNA helicase, RuvB subunit Back     alignment and domain information
>PRK07003 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK14958 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14960 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] Back     alignment and domain information
>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0477 consensus DNA replication licensing factor, MCM2 component [Replication, recombination and repair] Back     alignment and domain information
>PRK14949 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family Back     alignment and domain information
>PRK07994 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14961 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>PRK08691 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>KOG0738 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional Back     alignment and domain information
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14964 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0481 consensus DNA replication licensing factor, MCM5 component [Replication, recombination and repair] Back     alignment and domain information
>COG1221 PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>PRK14962 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK13765 ATP-dependent protease Lon; Provisional Back     alignment and domain information
>PRK06645 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14969 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK03992 proteasome-activating nucleotidase; Provisional Back     alignment and domain information
>PRK14951 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0479 consensus DNA replication licensing factor, MCM3 component [Replication, recombination and repair] Back     alignment and domain information
>PRK14957 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PLN03025 replication factor C subunit; Provisional Back     alignment and domain information
>TIGR00382 clpX endopeptidase Clp ATP-binding regulatory subunit (clpX) Back     alignment and domain information
>KOG0734 consensus AAA+-type ATPase containing the peptidase M41 domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0989 consensus Replication factor C, subunit RFC4 [Replication, recombination and repair] Back     alignment and domain information
>PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional Back     alignment and domain information
>PRK05563 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PHA02244 ATPase-like protein Back     alignment and domain information
>PRK08451 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14952 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0730 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] Back     alignment and domain information
>TIGR01242 26Sp45 26S proteasome subunit P45 family Back     alignment and domain information
>TIGR02974 phageshock_pspF psp operon transcriptional activator PspF Back     alignment and domain information
>KOG2004 consensus Mitochondrial ATP-dependent protease PIM1/LON [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02881 spore_V_K stage V sporulation protein K Back     alignment and domain information
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR Back     alignment and domain information
>KOG2028 consensus ATPase related to the helicase subunit of the Holliday junction resolvase [Replication, recombination and repair] Back     alignment and domain information
>PRK14965 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PTZ00361 26 proteosome regulatory subunit 4-like protein; Provisional Back     alignment and domain information
>PRK07764 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional Back     alignment and domain information
>TIGR01241 FtsH_fam ATP-dependent metalloprotease FtsH Back     alignment and domain information
>KOG0991 consensus Replication factor C, subunit RFC2 [Replication, recombination and repair] Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>TIGR01817 nifA Nif-specific regulatory protein Back     alignment and domain information
>PRK10787 DNA-binding ATP-dependent protease La; Provisional Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>CHL00176 ftsH cell division protein; Validated Back     alignment and domain information
>PRK14959 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional Back     alignment and domain information
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05896 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK13342 recombination factor protein RarA; Reviewed Back     alignment and domain information
>smart00763 AAA_PrkA PrkA AAA domain Back     alignment and domain information
>CHL00195 ycf46 Ycf46; Provisional Back     alignment and domain information
>PRK09111 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK11608 pspF phage shock protein operon transcriptional activator; Provisional Back     alignment and domain information
>PRK14963 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR00763 lon ATP-dependent protease La Back     alignment and domain information
>PRK07133 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK06647 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>KOG0731 consensus AAA+-type ATPase containing the peptidase M41 domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor Back     alignment and domain information
>PRK14953 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional Back     alignment and domain information
>CHL00181 cbbX CbbX; Provisional Back     alignment and domain information
>KOG1942 consensus DNA helicase, TBP-interacting protein [Replication, recombination and repair] Back     alignment and domain information
>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed Back     alignment and domain information
>CHL00206 ycf2 Ycf2; Provisional Back     alignment and domain information
>PRK14955 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional Back     alignment and domain information
>PRK15429 formate hydrogenlyase transcriptional activator FhlA; Provisional Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>PRK00440 rfc replication factor C small subunit; Reviewed Back     alignment and domain information
>PRK05201 hslU ATP-dependent protease ATP-binding subunit HslU; Provisional Back     alignment and domain information
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK12402 replication factor C small subunit 2; Reviewed Back     alignment and domain information
>TIGR00390 hslU ATP-dependent protease HslVU, ATPase subunit Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>KOG0652 consensus 26S proteasome regulatory complex, ATPase RPT5 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06305 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>KOG0727 consensus 26S proteasome regulatory complex, ATPase RPT3 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional Back     alignment and domain information
>PRK14954 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0742 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0733 consensus Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0728 consensus 26S proteasome regulatory complex, ATPase RPT6 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02544 44 clamp loader, small subunit; Provisional Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>PRK14970 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG0465 HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03689 pup_AAA proteasome ATPase Back     alignment and domain information
>TIGR02397 dnaX_nterm DNA polymerase III, subunit gamma and tau Back     alignment and domain information
>PTZ00112 origin recognition complex 1 protein; Provisional Back     alignment and domain information
>PF06068 TIP49: TIP49 C-terminus; InterPro: IPR010339 This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins Back     alignment and domain information
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>TIGR02915 PEP_resp_reg putative PEP-CTERM system response regulator Back     alignment and domain information
>PRK14948 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>KOG0733 consensus Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>KOG0737 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14971 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>PRK11361 acetoacetate metabolism regulatory protein AtoC; Provisional Back     alignment and domain information
>KOG2680 consensus DNA helicase TIP49, TBP-interacting protein [Transcription] Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>KOG0739 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>PRK04195 replication factor C large subunit; Provisional Back     alignment and domain information
>PRK07940 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>COG3283 TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>PRK10733 hflB ATP-dependent metalloprotease; Reviewed Back     alignment and domain information
>PRK09112 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>PRK15115 response regulator GlrR; Provisional Back     alignment and domain information
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>KOG0745 consensus Putative ATP-dependent Clp-type protease (AAA+ ATPase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed Back     alignment and domain information
>KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0726 consensus 26S proteasome regulatory complex, ATPase RPT2 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>TIGR01818 ntrC nitrogen regulation protein NR(I) Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>PRK10365 transcriptional regulatory protein ZraR; Provisional Back     alignment and domain information
>TIGR00362 DnaA chromosomal replication initiator protein DnaA Back     alignment and domain information
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07471 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK14087 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport Back     alignment and domain information
>PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>PLN00020 ribulose bisphosphate carboxylase/oxygenase activase -RuBisCO activase (RCA); Provisional Back     alignment and domain information
>PRK12422 chromosomal replication initiation protein; Provisional Back     alignment and domain information
>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] Back     alignment and domain information
>COG1220 HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14086 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05642 DNA replication initiation factor; Validated Back     alignment and domain information
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit Back     alignment and domain information
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK13536 nodulation factor exporter subunit NodI; Provisional Back     alignment and domain information
>PRK13537 nodulation ABC transporter NodI; Provisional Back     alignment and domain information
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG0740 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake Back     alignment and domain information
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function Back     alignment and domain information
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter Back     alignment and domain information
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity Back     alignment and domain information
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin Back     alignment and domain information
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup Back     alignment and domain information
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component Back     alignment and domain information
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules Back     alignment and domain information
>PF13177 DNA_pol3_delta2: DNA polymerase III, delta subunit; PDB: 1NJF_B 3GLG_G 1XXH_I 1NJG_A 3GLF_B 3GLI_G 1IQP_E 2GNO_A 1SXJ_E 1A5T_A Back     alignment and domain information
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>PRK08058 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds Back     alignment and domain information
>PRK05564 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment Back     alignment and domain information
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI Back     alignment and domain information
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) Back     alignment and domain information
>KOG0735 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed Back     alignment and domain information
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA Back     alignment and domain information
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system Back     alignment and domain information
>KOG0729 consensus 26S proteasome regulatory complex, ATPase RPT1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance Back     alignment and domain information
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively Back     alignment and domain information
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>PRK07399 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional Back     alignment and domain information
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system Back     alignment and domain information
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA Back     alignment and domain information
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea Back     alignment and domain information
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity Back     alignment and domain information
>KOG2035 consensus Replication factor C, subunit RFC3 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import Back     alignment and domain information
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively Back     alignment and domain information
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein Back     alignment and domain information
>TIGR02673 FtsE cell division ATP-binding protein FtsE Back     alignment and domain information
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR00678 holB DNA polymerase III, delta' subunit Back     alignment and domain information
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters Back     alignment and domain information
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine Back     alignment and domain information
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK Back     alignment and domain information
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit Back     alignment and domain information
>KOG0651 consensus 26S proteasome regulatory complex, ATPase RPT4 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group Back     alignment and domain information
>COG1067 LonB Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport Back     alignment and domain information
>PRK04132 replication factor C small subunit; Provisional Back     alignment and domain information
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids Back     alignment and domain information
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE Back     alignment and domain information
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] Back     alignment and domain information
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>COG4133 CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids Back     alignment and domain information
>PRK10908 cell division protein FtsE; Provisional Back     alignment and domain information
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed Back     alignment and domain information
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain Back     alignment and domain information
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters Back     alignment and domain information
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed Back     alignment and domain information
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export Back     alignment and domain information
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] Back     alignment and domain information
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis Back     alignment and domain information
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD Back     alignment and domain information
>KOG0743 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea Back     alignment and domain information
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit Back     alignment and domain information
>PRK15455 PrkA family serine protein kinase; Provisional Back     alignment and domain information
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] Back     alignment and domain information
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane Back     alignment and domain information
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos) Back     alignment and domain information
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein Back     alignment and domain information
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein Back     alignment and domain information
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional Back     alignment and domain information
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional Back     alignment and domain information
>TIGR00602 rad24 checkpoint protein rad24 Back     alignment and domain information
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient Back     alignment and domain information
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT Back     alignment and domain information
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP Back     alignment and domain information
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional Back     alignment and domain information
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment Back     alignment and domain information
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake Back     alignment and domain information
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR) Back     alignment and domain information
>PF14532 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 3CO5_B 3N70_H Back     alignment and domain information
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit Back     alignment and domain information
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE) Back     alignment and domain information
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein Back     alignment and domain information
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional Back     alignment and domain information
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] Back     alignment and domain information
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional Back     alignment and domain information
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed Back     alignment and domain information
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional Back     alignment and domain information
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional Back     alignment and domain information
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos) Back     alignment and domain information
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB Back     alignment and domain information
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D Back     alignment and domain information
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK05707 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG4650 RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>PF08298 AAA_PrkA: PrkA AAA domain; InterPro: IPR013153 This is entry is found at the N terminus of PrkA proteins - bacterial and archaeal serine kinases approximately 630 residues in length Back     alignment and domain information
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids Back     alignment and domain information
>KOG0741 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein Back     alignment and domain information
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional Back     alignment and domain information
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit Back     alignment and domain information
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein Back     alignment and domain information
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional Back     alignment and domain information
>KOG1051 consensus Chaperone HSP104 and related ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family Back     alignment and domain information
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional Back     alignment and domain information
>PRK10762 D-ribose transporter ATP binding protein; Provisional Back     alignment and domain information
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed Back     alignment and domain information
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters Back     alignment and domain information
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] Back     alignment and domain information
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome Back     alignment and domain information
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A Back     alignment and domain information
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules Back     alignment and domain information
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional Back     alignment and domain information
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK09700 D-allose transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14241 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional Back     alignment and domain information
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PF12775 AAA_7: P-loop containing dynein motor region D3; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A Back     alignment and domain information
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] Back     alignment and domain information
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D Back     alignment and domain information
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export Back     alignment and domain information
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA Back     alignment and domain information
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters Back     alignment and domain information
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component Back     alignment and domain information
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E Back     alignment and domain information
>KOG1808 consensus AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13633 cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14242 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03299 ABC_ModC_like Archeal protein closely related to ModC Back     alignment and domain information
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13549 xylose transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins Back     alignment and domain information
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional Back     alignment and domain information
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria Back     alignment and domain information
>PRK10636 putative ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>KOG0730 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C Back     alignment and domain information
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK03695 vitamin B12-transporter ATPase; Provisional Back     alignment and domain information
>KOG0732 consensus AAA+-type ATPase containing the bromodomain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1) Back     alignment and domain information
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein Back     alignment and domain information
>KOG1969 consensus DNA replication checkpoint protein CHL12/CTF18 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional Back     alignment and domain information
>PRK14235 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2 Back     alignment and domain information
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth Back     alignment and domain information
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK06871 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein Back     alignment and domain information
>TIGR01978 sufC FeS assembly ATPase SufC Back     alignment and domain information
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor Back     alignment and domain information
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors Back     alignment and domain information
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK07993 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1 Back     alignment and domain information
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13651 cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14240 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional Back     alignment and domain information
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family Back     alignment and domain information
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional Back     alignment and domain information
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter Back     alignment and domain information
>PRK14243 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14237 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03290 ABCC_SUR1_N The SUR domain 1 Back     alignment and domain information
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14236 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] Back     alignment and domain information
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor Back     alignment and domain information
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional Back     alignment and domain information
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C Back     alignment and domain information
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional Back     alignment and domain information
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14238 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional Back     alignment and domain information
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK Back     alignment and domain information
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed Back     alignment and domain information
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family Back     alignment and domain information
>PRK14239 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK15064 ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK08769 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>KOG0990 consensus Replication factor C, subunit RFC5 [Replication, recombination and repair] Back     alignment and domain information
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional Back     alignment and domain information
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein Back     alignment and domain information
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE Back     alignment and domain information
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD Back     alignment and domain information
>TIGR01192 chvA glucan exporter ATP-binding protein Back     alignment and domain information
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed Back     alignment and domain information
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
1g8p_A350 Crystal Structure Of Bchi Subunit Of Magnesium Chel 1e-75
>pdb|1G8P|A Chain A, Crystal Structure Of Bchi Subunit Of Magnesium Chelatase Length = 350 Back     alignment and structure 
Iteration: 1

 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 200/332 (60%), Gaps = 7/332 (2%)
Query: 25  SKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVI 84
           S    RPV+PF+AIVGQE+MKL LLL  +DP IGGV++ GDRGTGKST VR+L  LLP I
Sbjct: 13  SGAKTRPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEI 72
Query: 85  KVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIE 144
           + V G P +S    P    I    +V+     ++      +VDLPLG +EDRV G +DIE
Sbjct: 73  EAVEGCPVSS----PNVEMIPDWATVLS---TNVIRKPTPVVDLPLGVSEDRVVGALDIE 125
Query: 145 KALTEGVKAFEPGLLAKANRGILYXXXXXXXXXXXXXXXXXSAASGWNTVEREGISISHP 204
           +A+++G KAFEPGLLA+ANRG LY                  A SG N VER+G+SI HP
Sbjct: 126 RAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHP 185
Query: 205 ARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSY 264
           ARF+L+GSGNPEEG+LRPQLLDRFG+  +V + RD E RV+++  R  +D +PK F + +
Sbjct: 186 ARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEW 245
Query: 265 KAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRXXXXXXXXX 324
           + +   ++ QI  AR  LP V+  +      + +C  L  DGLRG++   R         
Sbjct: 246 RPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALE 305
Query: 325 GRDKVSAEDIATVMPNCLRHRLRKDPLESIDS 356
           G   V  + +  V    L HRLR+DPL+   S
Sbjct: 306 GATAVGRDHLKRVATMALSHRLRRDPLDEAGS 337

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
1g8p_A350 Magnesium-chelatase 38 kDa subunit; parallel beta 1e-149
3nbx_X 500 ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structu 9e-11
3k1j_A 604 LON protease, ATP-dependent protease LON; ATP-bind 6e-10
2r44_A331 Uncharacterized protein; putative ATPase, structur 7e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
3uk6_A368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 3e-05
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G Length = 350 Back     alignment and structure
 Score =  424 bits (1093), Expect = e-149
 Identities = 166/344 (48%), Positives = 223/344 (64%), Gaps = 7/344 (2%)

Query: 25  SKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVI 84
           S    RPV+PF+AIVGQE+MKL LLL  +DP IGGV++ GDRGTGKST VR+L  LLP I
Sbjct: 13  SGAKTRPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEI 72

Query: 85  KVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIE 144
           + V G P +S   +                  ++      +VDLPLG +EDRV G +DIE
Sbjct: 73  EAVEGCPVSSPNVEMI-------PDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIE 125

Query: 145 KALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHP 204
           +A+++G KAFEPGLLA+ANRG LY+DE NLL+DH+VD+LLD A SG N VER+G+SI HP
Sbjct: 126 RAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHP 185

Query: 205 ARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSY 264
           ARF+L+GSGNPEEG+LRPQLLDRFG+  +V + RD E RV+++  R  +D +PK F + +
Sbjct: 186 ARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEW 245

Query: 265 KAEQAKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALK 324
           + +   ++ QI  AR  LP V+  +      + +C  L  DGLRG++   R+A+ALAAL+
Sbjct: 246 RPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALE 305

Query: 325 GRDKVSAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEVF 368
           G   V  + +  V    L HRLR+DPL+   S   +     E  
Sbjct: 306 GATAVGRDHLKRVATMALSHRLRRDPLDEAGSTARVARTVEETL 349
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli} Length = 500 Back     alignment and structure
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus} Length = 604 Back     alignment and structure
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406} Length = 331 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Length = 368 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
1g8p_A350 Magnesium-chelatase 38 kDa subunit; parallel beta 100.0
2r44_A331 Uncharacterized protein; putative ATPase, structur 99.96
3nbx_X 500 ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structu 99.94
3f8t_A506 Predicted ATPase involved in replication control, 99.94
3f9v_A595 Minichromosome maintenance protein MCM; replicativ 99.93
3k1j_A 604 LON protease, ATP-dependent protease LON; ATP-bind 99.85
4b4t_J405 26S protease regulatory subunit 8 homolog; hydrola 99.79
4b4t_I437 26S protease regulatory subunit 4 homolog; hydrola 99.79
3pfi_A338 Holliday junction ATP-dependent DNA helicase RUVB; 99.76
4b4t_M434 26S protease regulatory subunit 6A; hydrolase, AAA 99.76
4b4t_H467 26S protease regulatory subunit 7 homolog; hydrola 99.75
4b4t_L437 26S protease subunit RPT4; hydrolase, AAA-atpases, 99.75
3h4m_A285 Proteasome-activating nucleotidase; ATPase, PAN, A 99.75
4b4t_K428 26S protease regulatory subunit 6B homolog; hydrol 99.74
3uk6_A368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 99.74
2bjv_A265 PSP operon transcriptional activator; AAA, transcr 99.72
1ofh_A310 ATP-dependent HSL protease ATP-binding subunit HSL 99.72
1in4_A334 RUVB, holliday junction DNA helicase RUVB; AAA+-cl 99.71
1ojl_A304 Transcriptional regulatory protein ZRAR; response 99.71
1um8_A376 ATP-dependent CLP protease ATP-binding subunit CL; 99.71
1hqc_A324 RUVB; extended AAA-ATPase domain, complex with nuc 99.7
3pvs_A 447 Replication-associated recombination protein A; ma 99.7
3eie_A322 Vacuolar protein sorting-associated protein 4; AAA 99.69
2c9o_A456 RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP- 99.69
3b9p_A297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 99.69
3vfd_A389 Spastin; ATPase, microtubule severing, hydrolase; 99.68
3d8b_A357 Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s 99.68
2qp9_X355 Vacuolar protein sorting-associated protein 4; ATP 99.67
1xwi_A322 SKD1 protein; VPS4B, AAA ATPase, protein transport 99.67
1sxj_D353 Activator 1 41 kDa subunit; clamp loader, processi 99.67
4fcw_A311 Chaperone protein CLPB; AAA domain; HET: ADP; 2.35 99.66
3hws_A363 ATP-dependent CLP protease ATP-binding subunit CL; 99.66
2qz4_A262 Paraplegin; AAA+, SPG7, protease, ADP, structural 99.65
1lv7_A257 FTSH; alpha/beta domain, four helix bundle, hydrol 99.64
2chg_A226 Replication factor C small subunit; DNA-binding pr 99.63
3m6a_A 543 ATP-dependent protease LA 1; alpha, beta, ATP-bind 99.63
3pxi_A758 Negative regulator of genetic competence CLPC/MEC; 99.63
2zan_A444 Vacuolar protein sorting-associating protein 4B; S 99.63
3syl_A309 Protein CBBX; photosynthesis, rubisco activase, AA 99.62
3u61_B324 DNA polymerase accessory protein 44; AAA+, ATP hyd 99.62
1r6b_X758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 99.62
2r62_A268 Cell division protease FTSH homolog; ATPase domain 99.61
1iqp_A327 RFCS; clamp loader, extended AAA-ATPase domain, co 99.61
1g41_A444 Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dep 99.6
1ny5_A387 Transcriptional regulator (NTRC family); AAA+ ATPa 99.59
3cf0_A301 Transitional endoplasmic reticulum ATPase; AAA, P9 99.59
2ce7_A 476 Cell division protein FTSH; metalloprotease; HET: 99.59
1njg_A250 DNA polymerase III subunit gamma; rossman-like fol 99.57
3bos_A242 Putative DNA replication factor; P-loop containing 99.55
1sxj_C340 Activator 1 40 kDa subunit; clamp loader, processi 99.55
2v1u_A387 Cell division control protein 6 homolog; DNA repli 99.54
1sxj_E354 Activator 1 40 kDa subunit; clamp loader, processi 99.54
3dzd_A368 Transcriptional regulator (NTRC family); sigma43 a 99.53
1qvr_A854 CLPB protein; coiled coil, AAA ATPase, chaperone; 99.53
3pxg_A468 Negative regulator of genetic competence CLPC/MEC; 99.52
1fnn_A389 CDC6P, cell division control protein 6; ORC1, AAA 99.52
2x8a_A274 Nuclear valosin-containing protein-like; nuclear p 99.51
2dhr_A 499 FTSH; AAA+ protein, hexameric Zn metalloprotease, 99.51
2chq_A319 Replication factor C small subunit; DNA-binding pr 99.51
2z4s_A440 Chromosomal replication initiator protein DNAA; AA 99.51
1jr3_A 373 DNA polymerase III subunit gamma; processivity, pr 99.5
1ixz_A254 ATP-dependent metalloprotease FTSH; AAA domain fol 99.48
3cf2_A806 TER ATPase, transitional endoplasmic reticulum ATP 99.48
3hu3_A489 Transitional endoplasmic reticulum ATPase; VCP, tr 99.47
1iy2_A278 ATP-dependent metalloprotease FTSH; AAA domain fol 99.46
1sxj_B323 Activator 1 37 kDa subunit; clamp loader, processi 99.45
3n70_A145 Transport activator; sigma-54, ntpase, PSI, MCSG, 99.45
3co5_A143 Putative two-component system transcriptional RES 99.44
1r6b_X 758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 99.44
1l8q_A324 Chromosomal replication initiator protein DNAA; AA 99.43
2qby_B384 CDC6 homolog 3, cell division control protein 6 ho 99.42
3pxi_A 758 Negative regulator of genetic competence CLPC/MEC; 99.41
2qby_A386 CDC6 homolog 1, cell division control protein 6 ho 99.41
3cf2_A 806 TER ATPase, transitional endoplasmic reticulum ATP 99.38
1sxj_A 516 Activator 1 95 kDa subunit; clamp loader, processi 99.38
3te6_A318 Regulatory protein SIR3; heterochromatin, gene sil 99.34
1qvr_A 854 CLPB protein; coiled coil, AAA ATPase, chaperone; 99.33
3t15_A293 Ribulose bisphosphate carboxylase/oxygenase activ 99.3
1jbk_A195 CLPB protein; beta barrel, chaperone; 1.80A {Esche 99.26
2p65_A187 Hypothetical protein PF08_0063; CLPB, malaria, str 99.25
1d2n_A272 N-ethylmaleimide-sensitive fusion protein; hexamer 99.22
4akg_A 2695 Glutathione S-transferase class-MU 26 kDa isozyme 99.21
1a5t_A334 Delta prime, HOLB; zinc finger, DNA replication; 2 99.18
4akg_A 2695 Glutathione S-transferase class-MU 26 kDa isozyme 99.18
3fvq_A359 Fe(3+) IONS import ATP-binding protein FBPC; nucle 99.13
1vpl_A256 ABC transporter, ATP-binding protein; TM0544, stru 99.12
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 99.1
2olj_A263 Amino acid ABC transporter; ABC domain, ATPase, hy 99.1
1g6h_A257 High-affinity branched-chain amino acid transport 99.08
2yyz_A359 Sugar ABC transporter, ATP-binding protein; sugar 99.08
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 99.08
3rlf_A381 Maltose/maltodextrin import ATP-binding protein M; 99.07
1z47_A355 CYSA, putative ABC-transporter ATP-binding protein 99.06
1ji0_A240 ABC transporter; ATP binding protein, structural g 99.05
2pcj_A224 ABC transporter, lipoprotein-releasing system ATP- 99.05
1b0u_A262 Histidine permease; ABC transporter, transport pro 99.05
1v43_A372 Sugar-binding transport ATP-binding protein; ATPas 99.04
2ihy_A279 ABC transporter, ATP-binding protein; ATPase, ABC 99.03
1sgw_A214 Putative ABC transporter; structural genomics, P p 99.03
4g1u_C266 Hemin import ATP-binding protein HMUV; membrane tr 99.02
3d31_A348 Sulfate/molybdate ABC transporter, ATP-binding pro 99.02
2nq2_C253 Hypothetical ABC transporter ATP-binding protein H 99.02
3gfo_A275 Cobalt import ATP-binding protein CBIO 1; structur 99.01
2ff7_A247 Alpha-hemolysin translocation ATP-binding protein 99.0
2it1_A362 362AA long hypothetical maltose/maltodextrin trans 98.99
3tif_A235 Uncharacterized ABC transporter ATP-binding prote; 98.98
1oxx_K353 GLCV, glucose, ABC transporter, ATP binding protei 98.97
2onk_A240 Molybdate/tungstate ABC transporter, ATP-binding p 98.97
2ixe_A271 Antigen peptide transporter 1; ABC ATPase, hydrola 98.95
2gno_A305 DNA polymerase III, gamma subunit-related protein; 98.94
2qi9_C249 Vitamin B12 import ATP-binding protein BTUD; inner 98.94
1g29_1372 MALK, maltose transport protein MALK; ATPase, acti 98.93
3tui_C366 Methionine import ATP-binding protein METN; ABC-tr 98.92
3ec2_A180 DNA replication protein DNAC; helicase loader, rep 98.91
3gd7_A390 Fusion complex of cystic fibrosis transmembrane co 98.91
1ypw_A 806 Transitional endoplasmic reticulum ATPase; AAA, P9 98.91
1mv5_A243 LMRA, multidrug resistance ABC transporter ATP-bin 98.9
2yz2_A266 Putative ABC transporter ATP-binding protein TM_0; 98.9
2pjz_A263 Hypothetical protein ST1066; ATP binding protein, 98.89
1w5s_A412 Origin recognition complex subunit 2 ORC2; replica 98.89
3nh6_A306 ATP-binding cassette SUB-family B member 6, mitoc; 98.88
2ghi_A260 Transport protein; multidrug resistance protein, M 98.87
2d2e_A250 SUFC protein; ABC-ATPase, SUF protein, 310-helix, 98.86
2pze_A229 Cystic fibrosis transmembrane conductance regulat; 98.83
2cbz_A237 Multidrug resistance-associated protein 1; ABC pro 98.83
3b5x_A582 Lipid A export ATP-binding/permease protein MSBA; 98.79
2kjq_A149 DNAA-related protein; solution structure, NESG, st 98.76
2zu0_C267 Probable ATP-dependent transporter SUFC; iron-sulf 98.75
2bbs_A290 Cystic fibrosis transmembrane conductance regulato 98.71
3qf4_B598 Uncharacterized ABC transporter ATP-binding prote 98.68
3b60_A582 Lipid A export ATP-binding/permease protein MSBA; 98.67
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 98.65
3qf4_A587 ABC transporter, ATP-binding protein; multidrug tr 98.65
4a82_A578 Cystic fibrosis transmembrane conductance regulat; 98.64
2yl4_A595 ATP-binding cassette SUB-family B member 10, mitoc 98.63
1yqt_A538 RNAse L inhibitor; ATP-binding cassette, ribosome 98.53
1yqt_A 538 RNAse L inhibitor; ATP-binding cassette, ribosome 98.53
1tue_A212 Replication protein E1; helicase, replication, E1E 98.52
1ye8_A178 Protein THEP1, hypothetical UPF0334 kinase-like pr 98.52
3bk7_A 607 ABC transporter ATP-binding protein; ABC ATPase, i 98.5
3ozx_A 538 RNAse L inhibitor; ATP binding cassette protein, h 98.49
3bk7_A607 ABC transporter ATP-binding protein; ABC ATPase, i 98.49
3ozx_A538 RNAse L inhibitor; ATP binding cassette protein, h 98.45
3j16_B 608 RLI1P; ribosome recycling, translation, eukarya, r 98.31
3j16_B608 RLI1P; ribosome recycling, translation, eukarya, r 98.29
3g5u_A 1284 MCG1178, multidrug resistance protein 1A; P-glycop 98.26
1jr3_D 343 DNA polymerase III, delta subunit; processivity, p 98.26
2iw3_A 986 Elongation factor 3A; acetylation, ATP-binding, pr 98.23
2eyu_A261 Twitching motility protein PILT; pilus retraction 98.22
3g5u_A1284 MCG1178, multidrug resistance protein 1A; P-glycop 98.21
4f4c_A1321 Multidrug resistance protein PGP-1; ABC transporte 98.2
4f4c_A 1321 Multidrug resistance protein PGP-1; ABC transporte 98.18
1u0j_A267 DNA replication protein; AAA+ protein, P-loop atpa 98.12
1htw_A158 HI0065; nucleotide-binding fold, structural genomi 98.11
4gp7_A171 Metallophosphoesterase; polynucleotide kinase phos 98.09
3jvv_A356 Twitching mobility protein; hexameric P-loop ATPas 98.05
2qgz_A308 Helicase loader, putative primosome component; str 98.0
2i3b_A189 HCR-ntpase, human cancer-related ntpase; AAA, ross 97.99
2iw3_A986 Elongation factor 3A; acetylation, ATP-binding, pr 97.94
3sop_A270 Neuronal-specific septin-3; hydrolase; HET: GDP; 2 97.84
3ux8_A 670 Excinuclease ABC, A subunit; UVRA, nucleotide exci 97.84
2v9p_A305 Replication protein E1; AAA+ molecular motor, DNA 97.78
2jeo_A245 Uridine-cytidine kinase 1; UCK, transferase, ATP-b 97.71
2r2a_A199 Uncharacterized protein; zonular occludens toxin, 97.7
3thx_B918 DNA mismatch repair protein MSH3; ABC family ATPas 97.69
1z6g_A218 Guanylate kinase; structural genomics, SGC, struct 97.69
2ewv_A372 Twitching motility protein PILT; pilus retraction 97.61
3thx_A934 DNA mismatch repair protein MSH2; ABC family ATPas 97.55
3tr0_A205 Guanylate kinase, GMP kinase; purines, pyrimidines 97.54
2qm8_A337 GTPase/ATPase; G protein, G3E, metallochaperone, c 97.53
3vaa_A199 Shikimate kinase, SK; structural genomics, center 97.53
1tf7_A 525 KAIC; homohexamer, hexamer, circadian clock protei 97.52
3b85_A208 Phosphate starvation-inducible protein; PHOH2, ATP 97.51
3nwj_A250 ATSK2; P loop, shikimate, nucleoside monophosphate 97.49
1znw_A207 Guanylate kinase, GMP kinase; ATP:GMP-phosphotrans 97.48
2obl_A347 ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O 97.46
1kgd_A180 CASK, peripheral plasma membrane CASK; maguk, guan 97.44
2dpy_A438 FLII, flagellum-specific ATP synthase; beta barrel 97.44
1zp6_A191 Hypothetical protein ATU3015; alpha-beta protein., 97.43
3c8u_A208 Fructokinase; YP_612366.1, putative fructose trans 97.42
2pt7_A330 CAG-ALFA; ATPase, protein-protein complex, type IV 97.41
2gza_A361 Type IV secretion system protein VIRB11; ATPase, h 97.41
2orw_A184 Thymidine kinase; TMTK, TP4A, transferase; HET: 4T 97.38
3ux8_A670 Excinuclease ABC, A subunit; UVRA, nucleotide exci 97.36
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 97.35
1kag_A173 SKI, shikimate kinase I; transferase, structural g 97.33
3szr_A 608 Interferon-induced GTP-binding protein MX1; interf 97.33
3uie_A200 Adenylyl-sulfate kinase 1, chloroplastic; rossmann 97.31
3lnc_A231 Guanylate kinase, GMP kinase; ALS collaborative cr 97.31
1lvg_A198 Guanylate kinase, GMP kinase; transferase; HET: AD 97.3
1s96_A219 Guanylate kinase, GMP kinase; E.coli, dimer, SAD, 97.29
3a00_A186 Guanylate kinase, GMP kinase; domain movement, dim 97.28
3upu_A 459 ATP-dependent DNA helicase DDA; RECA-like domain, 97.27
2oap_1511 GSPE-2, type II secretion system protein; hexameri 97.26
4eun_A200 Thermoresistant glucokinase; putative sugar kinase 97.24
3tau_A208 Guanylate kinase, GMP kinase; structural genomics, 97.23
2j41_A207 Guanylate kinase; GMP, GMK, transferase, ATP-bindi 97.2
3asz_A211 Uridine kinase; cytidine phosphorylation, transfer 97.19
1knq_A175 Gluconate kinase; ALFA/beta structure, transferase 97.16
1wb9_A800 DNA mismatch repair protein MUTS; DNA-binding, ATP 97.16
1svm_A377 Large T antigen; AAA+ fold, viral protein; HET: AT 97.13
1qhx_A178 CPT, protein (chloramphenicol phosphotransferase); 97.12
4a74_A231 DNA repair and recombination protein RADA; hydrola 97.1
3kb2_A173 SPBC2 prophage-derived uncharacterized protein YOR 97.09
3aez_A312 Pantothenate kinase; transferase, homodimer, COA b 97.08
3e1s_A574 Exodeoxyribonuclease V, subunit RECD; alpha and be 97.08
1ewq_A765 DNA mismatch repair protein MUTS; multiple domains 97.07
2npi_A460 Protein CLP1; CLP1-PCF11 complex, ATP binding, ter 97.06
2o8b_B1022 DNA mismatch repair protein MSH6; DNA damage respo 97.06
2bdt_A189 BH3686; alpha-beta protein, structural genomics, P 97.05
1cr0_A296 DNA primase/helicase; RECA-type protein fold, tran 97.03
3b9q_A302 Chloroplast SRP receptor homolog, alpha subunit CP 97.03
2qor_A204 Guanylate kinase; phosphotransferase, purine metab 97.01
2qen_A350 Walker-type ATPase; unknown function; HET: ADP; 2. 97.01
1tq4_A413 IIGP1, interferon-inducible GTPase; interferon gam 96.99
2ehv_A251 Hypothetical protein PH0186; KAIC, RECA ATPase, un 96.99
3tqc_A321 Pantothenate kinase; biosynthesis of cofactors, pr 96.98
2bbw_A246 Adenylate kinase 4, AK4; nucleotide kinase, nucleo 96.96
3ney_A197 55 kDa erythrocyte membrane protein; structural ge 96.96
2qag_B427 Septin-6, protein NEDD5; cell cycle, cell division 96.95
1via_A175 Shikimate kinase; structural genomics, transferase 96.94
1p9r_A418 General secretion pathway protein E; bacterial typ 96.93
2w0m_A235 SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus 96.93
1ly1_A181 Polynucleotide kinase; PNK, phosphatase, transfera 96.93
3trf_A185 Shikimate kinase, SK; amino acid biosynthesis, tra 96.92
3t61_A202 Gluconokinase; PSI-biology, structural genomics, p 96.92
1lw7_A365 Transcriptional regulator NADR; NMN, NMN adenylyl 96.9
1rj9_A304 FTSY, signal recognition protein; SRP-GTPase domai 96.9
1cke_A227 CK, MSSA, protein (cytidine monophosphate kinase); 96.89
2fna_A357 Conserved hypothetical protein; structural genomic 96.87
3kta_A182 Chromosome segregation protein SMC; structural mai 96.86
1gvn_B287 Zeta; postsegregational killing system, plasmid; 1 96.83
2og2_A359 Putative signal recognition particle receptor; nuc 96.83
3cm0_A186 Adenylate kinase; ATP-binding, cytoplasm, nucleoti 96.82
3e70_C328 DPA, signal recognition particle receptor; FTSY, S 96.8
2p5t_B253 PEZT; postsegregational killing system, phosphoryl 96.8
2yhs_A503 FTSY, cell division protein FTSY; cell cycle, prot 96.8
3lw7_A179 Adenylate kinase related protein (ADKA-like); AMP, 96.8
1y63_A184 LMAJ004144AAA protein; structural genomics, protei 96.8
1sq5_A308 Pantothenate kinase; P-loop, transferase; HET: PAU 96.79
1jjv_A206 Dephospho-COA kinase; P-loop nucleotide-binding fo 96.79
1nks_A194 Adenylate kinase; thermophilic, transferase; HET: 96.79
1kht_A192 Adenylate kinase; phosphotransferase, signaling pr 96.77
1rz3_A201 Hypothetical protein rbstp0775; MCSG, structural g 96.76
2qt1_A207 Nicotinamide riboside kinase 1; non-protein kinase 96.76
2ze6_A253 Isopentenyl transferase; crown GALL tumor, cytokin 96.76
2iyv_A184 Shikimate kinase, SK; transferase, aromatic amino 96.75
4e22_A252 Cytidylate kinase; P-loop, CMP/ATP binding, transf 96.74
2rhm_A193 Putative kinase; P-loop containing nucleoside trip 96.74
2if2_A204 Dephospho-COA kinase; alpha-beta protein, structur 96.74
3iij_A180 Coilin-interacting nuclear ATPase protein; alpha a 96.72
2pez_A179 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 96.72
3dl0_A216 Adenylate kinase; phosphotransferase, zinc coordin 96.71
2cvh_A220 DNA repair and recombination protein RADB; filamen 96.71
2jaq_A205 Deoxyguanosine kinase; transferase, deoxyribonucle 96.7
2ga8_A359 Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn 96.7
1e6c_A173 Shikimate kinase; phosphoryl transfer, ADP, shikim 96.69
2vli_A183 Antibiotic resistance protein; transferase, tunica 96.67
3euj_A 483 Chromosome partition protein MUKB, linker; MUKB, M 96.67
2yvu_A186 Probable adenylyl-sulfate kinase; transferase, str 96.67
3fb4_A216 Adenylate kinase; psychrophIle, phosphotransferase 96.66
1zuh_A168 Shikimate kinase; alpha-beta protein, transferase; 96.65
1tev_A196 UMP-CMP kinase; ploop, NMP binding region, LID reg 96.65
3sr0_A206 Adenylate kinase; phosphoryl transfer analogue, AL 96.65
2c95_A196 Adenylate kinase 1; transferase, AP4A, nucleotide 96.64
2cdn_A201 Adenylate kinase; phosphoryl transfer, associative 96.62
2bwj_A199 Adenylate kinase 5; phosphoryl transfer reaction, 96.62
2plr_A213 DTMP kinase, probable thymidylate kinase; TMP-bind 96.59
1zd8_A227 GTP:AMP phosphotransferase mitochondrial; ATP:AMP 96.58
1zak_A222 Adenylate kinase; ATP:AMP-phosphotransferase, tran 96.58
2pt5_A168 Shikimate kinase, SK; aromatic amino acid biosynth 96.56
1qf9_A194 UMP/CMP kinase, protein (uridylmonophosphate/cytid 96.55
3umf_A217 Adenylate kinase; rossmann fold, transferase; 2.05 96.55
1aky_A220 Adenylate kinase; ATP:AMP phosphotransferase, myok 96.55
1ex7_A186 Guanylate kinase; substrate-induced FIT, domain mo 96.54
1ukz_A203 Uridylate kinase; transferase; HET: ADP AMP; 1.90A 96.5
2vp4_A230 Deoxynucleoside kinase; ATP-binding, DNA synthesis 96.49
2v54_A204 DTMP kinase, thymidylate kinase; nucleotide biosyn 96.49
2z0h_A197 DTMP kinase, thymidylate kinase; ATP-binding, nucl 96.47
1m7g_A211 Adenylylsulfate kinase; APS kinase, transferase, s 96.47
1pzn_A349 RAD51, DNA repair and recombination protein RAD51, 96.45
1n0w_A243 DNA repair protein RAD51 homolog 1; DNA repair, ho 96.45
2b8t_A223 Thymidine kinase; deoxyribonucleoside kinase, zinc 96.43
2rcn_A358 Probable GTPase ENGC; YJEQ, circularly permuted, G 96.43
2pbr_A195 DTMP kinase, thymidylate kinase; transferase, nucl 96.43
2wwf_A212 Thymidilate kinase, putative; transferase, malaria 96.42
4eaq_A229 DTMP kinase, thymidylate kinase; structural genomi 96.38
1e4v_A214 Adenylate kinase; transferase(phosphotransferase); 96.37
3be4_A217 Adenylate kinase; malaria, cryptosporidium parvum 96.36
2qnr_A301 Septin-2, protein NEDD5; structural genomics conso 96.35
1u0l_A301 Probable GTPase ENGC; permutation, OB-fold, zinc-f 96.35
3r20_A233 Cytidylate kinase; structural genomics, seattle st 96.35
2xb4_A223 Adenylate kinase; ATP-binding, nucleotide-binding, 96.34
3tlx_A243 Adenylate kinase 2; structural genomics, structura 96.34
1nn5_A215 Similar to deoxythymidylate kinase (thymidylate K; 96.33
1ak2_A233 Adenylate kinase isoenzyme-2; nucleoside monophosp 96.32
1qhl_A227 Protein (cell division protein MUKB); SMC, chromos 96.32
1odf_A290 YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser 96.31
2f1r_A171 Molybdopterin-guanine dinucleotide biosynthesis pr 96.29
1oix_A191 RAS-related protein RAB-11A; small G protein, intr 96.29
3a4m_A260 L-seryl-tRNA(SEC) kinase; P-loop motif, walker A m 96.28
2f9l_A199 RAB11B, member RAS oncogene family; RAB11B GTPase, 96.25
1nlf_A279 Regulatory protein REPA; replicative DNA helicase 96.24
1q3t_A236 Cytidylate kinase; nucleotide monophosphate kinase 96.24
1uf9_A203 TT1252 protein; P-loop, nucleotide binding domain, 96.22
3ake_A208 Cytidylate kinase; CMP kinase, CMP complex, open c 96.21
1f2t_A149 RAD50 ABC-ATPase; DNA double-strand break repair, 96.17
1uj2_A252 Uridine-cytidine kinase 2; alpha/beta mononucleoti 96.15
1gtv_A214 TMK, thymidylate kinase; transferase, transferase 96.11
2p67_A341 LAO/AO transport system kinase; ARGK, structural G 96.1
2fz4_A237 DNA repair protein RAD25; RECA-like domain, DNA da 96.09
3cr8_A552 Sulfate adenylyltranferase, adenylylsulfate kinase 96.09
2yv5_A302 YJEQ protein; hydrolase, GTPase, permutation, stru 96.08
3crm_A323 TRNA delta(2)-isopentenylpyrophosphate transferase 96.06
1vht_A218 Dephospho-COA kinase; structural genomics, transfe 96.05
1pui_A210 ENGB, probable GTP-binding protein ENGB; structura 96.03
1g5t_A196 COB(I)alamin adenosyltransferase; P-loop protein, 95.98
2grj_A192 Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosp 95.97
1vma_A306 Cell division protein FTSY; TM0570, structural gen 95.97
1ltq_A301 Polynucleotide kinase; phosphatase, alpha/beta, P- 95.95
1z6t_A 591 APAF-1, apoptotic protease activating factor 1; ca 95.95
2px0_A296 Flagellar biosynthesis protein FLHF; SRP GTPase, f 95.94
2wji_A165 Ferrous iron transport protein B homolog; membrane 95.9
2qmh_A205 HPR kinase/phosphorylase; V267F mutation, ATP-bind 95.87
1t9h_A307 YLOQ, probable GTPase ENGC; N-terminal beta-barrel 95.87
2dr3_A247 UPF0273 protein PH0284; RECA superfamily ATPase, h 95.85
2zej_A184 Dardarin, leucine-rich repeat kinase 2; parkinson' 95.82
1f6b_A198 SAR1; gtpases, N-terminal helix, Mg-containing com 95.82
3a8t_A339 Adenylate isopentenyltransferase; rossmann fold pr 95.81
2vhj_A331 Ntpase P4, P4; non- hydrolysable ATP analogue, hyd 95.8
3qf7_A365 RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1. 95.79
3d3q_A340 TRNA delta(2)-isopentenylpyrophosphate transferase 95.72
1np6_A174 Molybdopterin-guanine dinucleotide biosynthesis pr 95.7
1w1w_A430 Structural maintenance of chromosome 1; cohesin, c 95.66
3qks_A203 DNA double-strand break repair RAD50 ATPase; RECA- 95.64
1m2o_B190 GTP-binding protein SAR1, GTP binding protein; zin 95.61
3vkw_A446 Replicase large subunit; alpha/beta domain, helica 95.61
2f6r_A281 COA synthase, bifunctional coenzyme A synthase; 18 95.6
2wjg_A188 FEOB, ferrous iron transport protein B homolog; me 95.59
4aby_A415 DNA repair protein RECN; hydrolase, double strand 95.56
2gj8_A172 MNME, tRNA modification GTPase TRME; G-domain dime 95.52
2qag_C418 Septin-7; cell cycle, cell division, GTP-binding, 95.52
3hr8_A356 Protein RECA; alpha and beta proteins (A/B, A+B), 95.52
1tf7_A525 KAIC; homohexamer, hexamer, circadian clock protei 95.51
3exa_A322 TRNA delta(2)-isopentenylpyrophosphate transferase 95.5
1xx6_A191 Thymidine kinase; NESG, northeast structural genom 95.5
3zvl_A416 Bifunctional polynucleotide phosphatase/kinase; hy 95.5
1xjc_A169 MOBB protein homolog; structural genomics, midwest 95.46
2h92_A219 Cytidylate kinase; rossmann fold, transferase; HET 95.46
3foz_A316 TRNA delta(2)-isopentenylpyrophosphate transferas; 95.45
1zu4_A320 FTSY; GTPase, signal recognition particle, SRP, re 95.45
1e69_A322 Chromosome segregation SMC protein; structural mai 95.4
1nij_A318 Hypothetical protein YJIA; structural genomics, P- 95.38
3lda_A400 DNA repair protein RAD51; DNA binding protein, ATP 95.37
4b3f_X 646 DNA-binding protein smubp-2; hydrolase, helicase; 95.36
1a7j_A290 Phosphoribulokinase; transferase, calvin cycle; 2. 95.36
3qkt_A339 DNA double-strand break repair RAD50 ATPase; RECA- 95.33
2dyk_A161 GTP-binding protein; GTPase, ribosome-binding prot 95.33
3tqf_A181 HPR(Ser) kinase; transferase, hydrolase; 2.80A {Co 95.3
2o5v_A359 DNA replication and repair protein RECF; ABC ATPas 95.3
1z2a_A168 RAS-related protein RAB-23; RAB GTPase, vesicular 95.28
2nzj_A175 GTP-binding protein REM 1; GDP/GTP binding, GTP hy 95.26
2ged_A193 SR-beta, signal recognition particle receptor beta 95.2
1kao_A167 RAP2A; GTP-binding protein, small G protein, GDP, 95.17
3ice_A422 Transcription termination factor RHO; transcriptio 95.17
3q72_A166 GTP-binding protein RAD; G-domain, CAV2 beta, sign 95.16
2ce2_X166 GTPase HRAS; signaling protein, guanine nucleotide 95.15
4edh_A213 DTMP kinase, thymidylate kinase; structural genomi 95.15
3gmt_A230 Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucle 95.14
3q85_A169 GTP-binding protein REM 2; G-domain, CAV2 beta, si 95.13
2www_A349 Methylmalonic aciduria type A protein, mitochondri 95.09
2erx_A172 GTP-binding protein DI-RAS2; GTP hydrolysis, trans 95.09
2j9r_A214 Thymidine kinase; TK1, DNK, lasso, transferase, AT 95.08
1u8z_A168 RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNH 95.08
1z0j_A170 RAB-22, RAS-related protein RAB-22A; RAB GTPase, R 95.07
1p5z_B263 DCK, deoxycytidine kinase; nucleoside kinase, P-lo 95.06
1ek0_A170 Protein (GTP-binding protein YPT51); vesicular tra 95.05
1g16_A170 RAS-related protein SEC4; G protein RAB, signaling 95.05
1wms_A177 RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, p 95.04
1z08_A170 RAS-related protein RAB-21; RAB GTPase, vesicular 95.0
3k53_A271 Ferrous iron transport protein B; GTPase fold, hel 95.0
2ocp_A241 DGK, deoxyguanosine kinase; protein-nucleotide com 94.99
3v9p_A227 DTMP kinase, thymidylate kinase; ssgcid, STRU geno 94.98
1ky3_A182 GTP-binding protein YPT7P; vesicular traffic, GTP 94.96
3e2i_A219 Thymidine kinase; Zn-binding, ATP-binding, DNA syn 94.96
1c1y_A167 RAS-related protein RAP-1A; GTP-binding proteins, 94.96
1nrj_B218 SR-beta, signal recognition particle receptor beta 94.96
2zr9_A349 Protein RECA, recombinase A; recombination, RECA m 94.95
3lxx_A239 GTPase IMAP family member 4; structural genomics c 94.93
1ega_A301 Protein (GTP-binding protein ERA); GTPase, RNA-bin 94.92
1r2q_A170 RAS-related protein RAB-5A; GTPase, GNP, atomic re 94.9
2lkc_A178 Translation initiation factor IF-2; NMR {Geobacill 94.9
2hxs_A178 RAB-26, RAS-related protein RAB-28; GTPase, signal 94.88
1ls1_A295 Signal recognition particle protein; FFH, SRP54, S 94.86
1r8s_A164 ADP-ribosylation factor 1; protein transport/excha 94.85
1svi_A195 GTP-binding protein YSXC; ENGB, GTPase, GDP, hydro 94.85
3tw8_B181 RAS-related protein RAB-35; longin domain, RAB GTP 94.85
2r6a_A454 DNAB helicase, replicative helicase; replication, 94.83
2cxx_A190 Probable GTP-binding protein ENGB; structural geno 94.82
3bc1_A195 RAS-related protein RAB-27A; RAB27, GTPase, RAB, s 94.79
3bh0_A315 DNAB-like replicative helicase; ATPase, replicatio 94.79
3tmk_A216 Thymidylate kinase; phosphotransferase; HET: T5A; 94.78
3t1o_A198 Gliding protein MGLA; G domain containing protein, 94.77
2oil_A193 CATX-8, RAS-related protein RAB-25; G-protein, GDP 94.77
2fn4_A181 P23, RAS-related protein R-RAS; GDP/GTP binding, G 94.77
1fzq_A181 ADP-ribosylation factor-like protein 3; protein-GD 94.76
1upt_A171 ARL1, ADP-ribosylation factor-like protein 1; hydr 94.76
4dsu_A189 GTPase KRAS, isoform 2B; small G-protein, signalin 94.74
3pqc_A195 Probable GTP-binding protein ENGB; rossmann fold, 94.74
2y8e_A179 RAB-protein 6, GH09086P, RAB6; hydrolase, nucleoti 94.72
1z0f_A179 RAB14, member RAS oncogene family; RAB GTPase, ves 94.71
1m7b_A184 RND3/RHOE small GTP-binding protein; small GTPase, 94.71
3lv8_A236 DTMP kinase, thymidylate kinase; structural genomi 94.71
1udx_A416 The GTP-binding protein OBG; TGS domain, riken str 94.7
1v5w_A343 DMC1, meiotic recombination protein DMC1/LIM15 hom 94.67
3clv_A208 RAB5 protein, putative; malaria, GTPase, structura 94.66
3con_A190 GTPase NRAS; structural genomics consortium, SGC, 94.65
2zts_A251 Putative uncharacterized protein PH0186; KAIC like 94.64
1ni3_A392 YCHF GTPase, YCHF GTP-binding protein; structural 94.61
2efe_B181 Small GTP-binding protein-like; GEF, GTPase, VPS9, 94.6
2bme_A186 RAB4A, RAS-related protein RAB4A; GTP-binding prot 94.59
2a9k_A187 RAS-related protein RAL-A; bacterial ADP-ribosyltr 94.58
2g6b_A180 RAS-related protein RAB-26; G-protein, GTP analogu 94.58
1c9k_A180 COBU, adenosylcobinamide kinase; alpha/beta struct 94.57
3ihw_A184 Centg3; RAS, centaurin, GTPase, structural genomic 94.56
3ld9_A223 DTMP kinase, thymidylate kinase; ssgcid, NIH, niai 94.56
4tmk_A213 Protein (thymidylate kinase); ATP:DTMP phosphotran 94.55
3eph_A409 TRNA isopentenyltransferase; transferase, alternat 94.54
3auy_A371 DNA double-strand break repair RAD50 ATPase; DNA r 94.53
2gf9_A189 RAS-related protein RAB-3D; G-protein, structural 94.51
3kkq_A183 RAS-related protein M-RAS; GTP-binding, GTPase, si 94.5
1moz_A183 ARL1, ADP-ribosylation factor-like protein 1; GTP- 94.49
3iev_A308 GTP-binding protein ERA; ERA, GTPase, KH domain, a 94.48
1w36_D 608 RECD, exodeoxyribonuclease V alpha chain; recombin 94.45
3b1v_A272 Ferrous iron uptake transporter protein B; G prote 94.45
1mh1_A186 RAC1; GTP-binding, GTPase, small G-protein, RHO fa 94.45
2gk6_A 624 Regulator of nonsense transcripts 1; UPF1, helicas 94.44
2z43_A324 DNA repair and recombination protein RADA; archaea 94.44
4ag6_A392 VIRB4 ATPase, type IV secretory pathway VIRB4 comp 94.44
2r8r_A228 Sensor protein; KDPD, PFAM02702, MCSG, structural 94.43
3cbq_A195 GTP-binding protein REM 2; FLJ38964A, structural g 94.42
1ksh_A186 ARF-like protein 2; small GTPase, small GTP-bindin 94.41
2fg5_A192 RAB-22B, RAS-related protein RAB-31; G-protein, GT 94.4
2cjw_A192 GTP-binding protein GEM; nucleotide-binding, small 94.4
3dz8_A191 RAS-related protein RAB-3B; GDP, GTPase, structura 94.39
1zbd_A203 Rabphilin-3A; G protein, effector, RABCDR, synapti 94.38
3tkl_A196 RAS-related protein RAB-1A; vesicle trafficking, p 94.38
2axn_A 520 6-phosphofructo-2-kinase/fructose-2,6- biphosphata 94.38
2bov_A206 RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, 94.38
3bwd_D182 RAC-like GTP-binding protein ARAC6; G domain, cyto 94.32
3t5g_A181 GTP-binding protein RHEB; immunoglobulin-like beta 94.32
3c5c_A187 RAS-like protein 12; GDP, GTPase, structural genom 94.32
1vg8_A207 RAS-related protein RAB-7; GTP-binding protein, pr 94.31
2atv_A196 RERG, RAS-like estrogen-regulated growth inhibitor 94.3
3oes_A201 GTPase rhebl1; small GTPase, structural genomics, 94.3
2a5j_A191 RAS-related protein RAB-2B; GTPase, signal transdu 94.29
1zd9_A188 ADP-ribosylation factor-like 10B; transport protei 94.28
1z06_A189 RAS-related protein RAB-33B; RAB GTPase, RAB33B GT 94.26
3fdi_A201 Uncharacterized protein; cytidylate kinase like pr 94.26
3kl4_A433 SRP54, signal recognition 54 kDa protein; signal r 94.25
2p5s_A199 RAS and EF-hand domain containing; G-protein, RAB, 94.24
1x3s_A195 RAS-related protein RAB-18; GTPase, GNP, structura 94.24
3reg_A194 RHO-like small GTPase; cytoskeleton, nucleotide-bi 94.24
2bcg_Y206 Protein YP2, GTP-binding protein YPT1; RABGTPase, 94.22
2ew1_A201 RAS-related protein RAB-30; G-protein, GTP analogu 94.22
2gf0_A199 GTP-binding protein DI-RAS1; GDP/GTP binding, GTP 94.22
2iwr_A178 Centaurin gamma 1; ANK repeat, zinc-finger, GTP-bi 94.22
1gwn_A205 RHO-related GTP-binding protein RHOE; GTPase, inac 94.21
2i1q_A322 DNA repair and recombination protein RADA; ATPase, 94.19
1zj6_A187 ADP-ribosylation factor-like protein 5; ARL, GTP-b 94.16
2wsm_A221 Hydrogenase expression/formation protein (HYPB); m 94.16
3iby_A256 Ferrous iron transport protein B; G protein, G dom 94.14
2h17_A181 ADP-ribosylation factor-like protein 5A; GDP, GTPa 94.11
3cph_A213 RAS-related protein SEC4; RAB GTPase, prenylation, 94.09
2o52_A200 RAS-related protein RAB-4B; G-protein, GDP, struct 94.09
3a1s_A258 Iron(II) transport protein B; FEOB, iron transport 94.09
3lxw_A247 GTPase IMAP family member 1; immunity, structural 94.07
2il1_A192 RAB12; G-protein, GDP, GTPase, predicted, structur 94.03
1g8f_A511 Sulfate adenylyltransferase; alpha-beta protein, b 93.99
2fh5_B214 SR-beta, signal recognition particle receptor beta 93.96
2h57_A190 ADP-ribosylation factor-like protein 6; GTP, GTPas 93.96
2b6h_A192 ADP-ribosylation factor 5; membrane trafficking, G 93.95
2q3h_A201 RAS homolog gene family, member U; GTPase, structu 93.95
2qu8_A228 Putative nucleolar GTP-binding protein 1; GTPase, 93.93
2hf9_A226 Probable hydrogenase nickel incorporation protein 93.9
4bas_A199 ADP-ribosylation factor, putative (small GTPase, p 93.89
2fv8_A207 H6, RHO-related GTP-binding protein RHOB; GDP/GTP 93.88
1mky_A439 Probable GTP-binding protein ENGA; GTPase, DER, KH 93.87
2f7s_A217 C25KG, RAS-related protein RAB-27B; G-protein, str 93.86
2fu5_C183 RAS-related protein RAB-8A; MSS4:RAB8 protein comp 93.86
1bif_A 469 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; 93.85
4hlc_A205 DTMP kinase, thymidylate kinase; TMK, MRSA, pipiri 93.84
2j1l_A214 RHO-related GTP-binding protein RHOD; GTPase, memb 93.83
3sfz_A 1249 APAF-1, apoptotic peptidase activating factor 1; a 93.83
1u94_A356 RECA protein, recombinase A; homologous recombinat 93.82
1j8m_F297 SRP54, signal recognition 54 kDa protein; signalin 93.82
3llu_A196 RAS-related GTP-binding protein C; structural geno 93.81
4a1f_A338 DNAB helicase, replicative DNA helicase; hydrolase 93.77
2a5y_B549 CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis 93.77
2gco_A201 H9, RHO-related GTP-binding protein RHOC; GTPase,s 93.74
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G Back     alignment and structure
Probab=100.00  E-value=8.9e-35  Score=274.22  Aligned_cols=333  Identities=50%  Similarity=0.833  Sum_probs=247.3

Q ss_pred             CCCCCCCccccChHHHHHHhhhhhccCCCCeeEEecCCCCChhHHHHHHHhccCcceeecCCCCCCCCCCcchhhhhhhh
Q 017575           29 QRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRE  108 (369)
Q Consensus        29 ~~~~~~~~~i~G~~~~~~~l~~~l~~~~~g~vlL~Gp~G~GKTtla~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (369)
                      ..+.++|++++|++.++..+..+.+.+..++++|+||||||||++|++++..++......+.++++.....+.....+. 
T Consensus        17 ~~~~~~f~~i~G~~~~~~~l~~~~~~~~~~~vLl~G~~GtGKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   95 (350)
T 1g8p_A           17 TRPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVL-   95 (350)
T ss_dssp             -CCCCCGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGGSCTTCCCS-
T ss_pred             CCCCCCchhccChHHHHHHHHHHhhCCCCceEEEECCCCccHHHHHHHHHHhCccccccccccccccccccccchhhhh-
Confidence            3456689999999998887776665444566999999999999999999998864332223334333222222211111 


Q ss_pred             hhhccccchhhhhccccccCCCCCchHhhhcccchhHHhhhcccccccchhhhcCCCeEEEeCCCCCCHHHHHHHHHHHh
Q 017575          109 SVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAA  188 (369)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~a~~~vl~lDE~~~l~~~~~~~L~~~l~  188 (369)
                      .      +.......+++..+...+...++|..+....+.++...+.+|.+..++++++||||++.+++..++.|+++|+
T Consensus        96 ~------~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~~~~a~~~vl~iDEi~~l~~~~~~~Ll~~le  169 (350)
T 1g8p_A           96 S------TNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQ  169 (350)
T ss_dssp             C------CCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHHHH
T ss_pred             c------cccccCCCcccccCCCcchhhheeechhhhhhcCCceeecCceeeecCCCEEEEeChhhCCHHHHHHHHHHHh
Confidence            0      0000001123334455566677887777666666766777899988899999999999999999999999999


Q ss_pred             cCCceeeecceeeeecCceEEEeecCCCCCCCCHhHHhhhccceeecCCCCHHHHHHHHHHhhhccCCChHHHhhhHHHH
Q 017575          189 SGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAEQ  268 (369)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~li~t~n~~~~~l~~al~~R~~~~i~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~  268 (369)
                      ++...+.+.|.....+.++.+|+|+||.++.++++|++||.+++.+++|+..+.+..|+........++..+...+....
T Consensus       170 ~~~~~~~~~g~~~~~~~~~~li~~~n~~~~~l~~~L~~R~~~~~~l~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~  249 (350)
T 1g8p_A          170 SGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKD  249 (350)
T ss_dssp             HSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             cCceEEEecceEEeeCCceEEEEEeCCCCCCCCHHHHhhcceEEEcCCCCcHHHHHHHHHHHHhcccCchhhccccccch
Confidence            98777777777778888999999999877779999999999889999998788887888765443333444555556667


Q ss_pred             HHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHcCCCCCchhHHHHHHHHHHHHHcCCCCCCHHHHHHHHhHHhcccccC
Q 017575          269 AKLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRK  348 (369)
Q Consensus       269 ~~~~~~i~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~s~R~~~~ll~~a~a~A~l~~~~~v~~~~i~~a~~~vl~~r~~~  348 (369)
                      ..+..++..++.....+.++++++++|..++...+..+.|.+.++++.|.+.|.+++++.|+.+|+.+++.+++.||+..
T Consensus       250 ~~~~~~i~~~~~~~~~~~ls~~~~~~l~~~~~~~~~~~~R~~~~ll~~a~~~A~~~~~~~v~~~~v~~a~~~~l~~r~~~  329 (350)
T 1g8p_A          250 MDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRR  329 (350)
T ss_dssp             HHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHHHGGGCC-
T ss_pred             HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHHHhhcccc
Confidence            77788887777777778999999999999999888767899999999999999999999999999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHHhhh
Q 017575          349 DPLESIDSGLLIIEKFYEVF  368 (369)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~  368 (369)
                      .|.+....++.+.++++++|
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~  349 (350)
T 1g8p_A          330 DPLDEAGSTARVARTVEETL  349 (350)
T ss_dssp             -----------CHHHHHHHC
T ss_pred             CccccCchhHHHHHHHHhhC
Confidence            88877777788888888876
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli} Back     alignment and structure
>3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19} Back     alignment and structure
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus} Back     alignment and structure
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus} Back     alignment and structure
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} Back     alignment and structure
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Back     alignment and structure
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* Back     alignment and structure
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* Back     alignment and structure
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A* Back     alignment and structure
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium} Back     alignment and structure
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20 Back     alignment and structure
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C* Back     alignment and structure
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli} Back     alignment and structure
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C Back     alignment and structure
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A* Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Back     alignment and structure
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens} Back     alignment and structure
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} Back     alignment and structure
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A* Back     alignment and structure
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} Back     alignment and structure
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A* Back     alignment and structure
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A Back     alignment and structure
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} Back     alignment and structure
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} Back     alignment and structure
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A Back     alignment and structure
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} Back     alignment and structure
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A Back     alignment and structure
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* Back     alignment and structure
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B* Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* Back     alignment and structure
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E* Back     alignment and structure
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A* Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Back     alignment and structure
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E* Back     alignment and structure
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A* Back     alignment and structure
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A Back     alignment and structure
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} Back     alignment and structure
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A Back     alignment and structure
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 Back     alignment and structure
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis} Back     alignment and structure
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} Back     alignment and structure
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} Back     alignment and structure
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A Back     alignment and structure
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* Back     alignment and structure
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B* Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Back     alignment and structure
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* Back     alignment and structure
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A* Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Back     alignment and structure
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae} Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* Back     alignment and structure
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} Back     alignment and structure
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* Back     alignment and structure
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 Back     alignment and structure
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A Back     alignment and structure
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Back     alignment and structure
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Back     alignment and structure
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E* Back     alignment and structure
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Back     alignment and structure
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J* Back     alignment and structure
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A* Back     alignment and structure
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima} Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* Back     alignment and structure
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A Back     alignment and structure
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A Back     alignment and structure
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12 Back     alignment and structure
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A* Back     alignment and structure
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus} Back     alignment and structure
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12 Back     alignment and structure
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis} Back     alignment and structure
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12 Back     alignment and structure
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae} Back     alignment and structure
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124} Back     alignment and structure
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A* Back     alignment and structure
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii} Back     alignment and structure
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A* Back     alignment and structure
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A* Back     alignment and structure
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12 Back     alignment and structure
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A* Back     alignment and structure
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C Back     alignment and structure
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A Back     alignment and structure
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C Back     alignment and structure
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Back     alignment and structure
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens} Back     alignment and structure
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12 Back     alignment and structure
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima} Back     alignment and structure
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii} Back     alignment and structure
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A* Back     alignment and structure
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A* Back     alignment and structure
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str} Back     alignment and structure
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A* Back     alignment and structure
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A Back     alignment and structure
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens} Back     alignment and structure
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae} Back     alignment and structure
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} Back     alignment and structure
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A Back     alignment and structure
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A* Back     alignment and structure
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima} Back     alignment and structure
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* Back     alignment and structure
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima} Back     alignment and structure
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A Back     alignment and structure
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus} Back     alignment and structure
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus} Back     alignment and structure
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20 Back     alignment and structure
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11 Back     alignment and structure
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B* Back     alignment and structure
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus} Back     alignment and structure
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B* Back     alignment and structure
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus} Back     alignment and structure
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae} Back     alignment and structure
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae} Back     alignment and structure
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A* Back     alignment and structure
>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A* Back     alignment and structure
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A Back     alignment and structure
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus} Back     alignment and structure
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A* Back     alignment and structure
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans} Back     alignment and structure
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans} Back     alignment and structure
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A Back     alignment and structure
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A Back     alignment and structure
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A* Back     alignment and structure
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A* Back     alignment and structure
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} Back     alignment and structure
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A Back     alignment and structure
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens} Back     alignment and structure
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus} Back     alignment and structure
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A* Back     alignment and structure
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* Back     alignment and structure
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58} Back     alignment and structure
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B* Back     alignment and structure
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum} Back     alignment and structure
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A* Back     alignment and structure
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A* Back     alignment and structure
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii} Back     alignment and structure
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A* Back     alignment and structure
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A* Back     alignment and structure
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana} Back     alignment and structure
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A Back     alignment and structure
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A* Back     alignment and structure
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium} Back     alignment and structure
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25 Back     alignment and structure
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} Back     alignment and structure
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A Back     alignment and structure
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis} Back     alignment and structure
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A* Back     alignment and structure
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus} Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2 Back     alignment and structure
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Back     alignment and structure
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A* Back     alignment and structure
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum} Back     alignment and structure
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1 Back     alignment and structure
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A* Back     alignment and structure
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4} Back     alignment and structure
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1 Back     alignment and structure
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP} Back     alignment and structure
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes} Back     alignment and structure
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus} Back     alignment and structure
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A* Back     alignment and structure
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A* Back     alignment and structure
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A* Back     alignment and structure
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A Back     alignment and structure
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A* Back     alignment and structure
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A* Back     alignment and structure
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A* Back     alignment and structure
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A* Back     alignment and structure
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A* Back     alignment and structure
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A* Back     alignment and structure
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae} Back     alignment and structure
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B* Back     alignment and structure
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25 Back     alignment and structure
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A* Back     alignment and structure
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana} Back     alignment and structure
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax} Back     alignment and structure
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi} Back     alignment and structure
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A* Back     alignment and structure
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii} Back     alignment and structure
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A Back     alignment and structure
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2 Back     alignment and structure
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A* Back     alignment and structure
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2} Back     alignment and structure
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 Back     alignment and structure
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii} Back     alignment and structure
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti} Back     alignment and structure
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1 Back     alignment and structure
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D* Back     alignment and structure
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A* Back     alignment and structure
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X* Back     alignment and structure
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B* Back     alignment and structure
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana} Back     alignment and structure
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus} Back     alignment and structure
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B* Back     alignment and structure
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae} Back     alignment and structure
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A Back     alignment and structure
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A Back     alignment and structure
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1 Back     alignment and structure
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A* Back     alignment and structure
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1 Back     alignment and structure
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1 Back     alignment and structure
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A Back     alignment and structure
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6 Back     alignment and structure
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* Back     alignment and structure
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A Back     alignment and structure
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A* Back     alignment and structure
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis} Back     alignment and structure
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus} Back     alignment and structure
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus} Back     alignment and structure
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A Back     alignment and structure
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A* Back     alignment and structure
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A* Back     alignment and structure
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A* Back     alignment and structure
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* Back     alignment and structure
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* Back     alignment and structure
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A* Back     alignment and structure
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans} Back     alignment and structure
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A* Back     alignment and structure
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix} Back     alignment and structure
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus} Back     alignment and structure
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A* Back     alignment and structure
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A* Back     alignment and structure
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A Back     alignment and structure
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A Back     alignment and structure
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} Back     alignment and structure
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii} Back     alignment and structure
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A* Back     alignment and structure
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1 Back     alignment and structure
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A* Back     alignment and structure
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni} Back     alignment and structure
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A* Back     alignment and structure
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A Back     alignment and structure
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A* Back     alignment and structure
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A* Back     alignment and structure
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A* Back     alignment and structure
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A* Back     alignment and structure
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11 Back     alignment and structure
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A* Back     alignment and structure
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V Back     alignment and structure
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus} Back     alignment and structure
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A* Back     alignment and structure
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A Back     alignment and structure
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A* Back     alignment and structure
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II} Back     alignment and structure
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A* Back     alignment and structure
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8 Back     alignment and structure
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A* Back     alignment and structure
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A* Back     alignment and structure
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum} Back     alignment and structure
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A* Back     alignment and structure
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A* Back     alignment and structure
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12 Back     alignment and structure
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 Back     alignment and structure
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus} Back     alignment and structure
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B* Back     alignment and structure
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A* Back     alignment and structure
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A* Back     alignment and structure
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A Back     alignment and structure
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1 Back     alignment and structure
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1 Back     alignment and structure
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A* Back     alignment and structure
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A* Back     alignment and structure
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A* Back     alignment and structure
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A* Back     alignment and structure
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10 Back     alignment and structure
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19 Back     alignment and structure
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} Back     alignment and structure
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus} Back     alignment and structure
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A Back     alignment and structure
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A Back     alignment and structure
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8 Back     alignment and structure
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* Back     alignment and structure
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima} Back     alignment and structure
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10 Back     alignment and structure
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A Back     alignment and structure
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens} Back     alignment and structure
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A* Back     alignment and structure
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A* Back     alignment and structure
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A* Back     alignment and structure
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8 Back     alignment and structure
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B* Back     alignment and structure
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A* Back     alignment and structure
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} Back     alignment and structure
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A* Back     alignment and structure
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A* Back     alignment and structure
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} Back     alignment and structure
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A Back     alignment and structure
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Back     alignment and structure
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A* Back     alignment and structure
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B* Back     alignment and structure
>3vkw_A Replicase large subunit; alpha/beta domain, helicase, transferase; 1.90A {Tomato mosaic virus} Back     alignment and structure
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus} Back     alignment and structure
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii} Back     alignment and structure
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans} Back     alignment and structure
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A Back     alignment and structure
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima} Back     alignment and structure
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A* Back     alignment and structure
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A Back     alignment and structure
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14 Back     alignment and structure
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* Back     alignment and structure
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 Back     alignment and structure
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A Back     alignment and structure
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A Back     alignment and structure
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1 Back     alignment and structure
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A* Back     alignment and structure
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A Back     alignment and structure
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6 Back     alignment and structure
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B Back     alignment and structure
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus} Back     alignment and structure
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii} Back     alignment and structure
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans} Back     alignment and structure
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A* Back     alignment and structure
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens} Back     alignment and structure
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R* Back     alignment and structure
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A Back     alignment and structure
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A* Back     alignment and structure
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ... Back     alignment and structure
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A* Back     alignment and structure
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A* Back     alignment and structure
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens} Back     alignment and structure
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A* Back     alignment and structure
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A* Back     alignment and structure
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A* Back     alignment and structure
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ... Back     alignment and structure
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A Back     alignment and structure
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A* Back     alignment and structure
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A* Back     alignment and structure
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus} Back     alignment and structure
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A* Back     alignment and structure
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus} Back     alignment and structure
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D* Back     alignment and structure
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ... Back     alignment and structure
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens} Back     alignment and structure
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X Back     alignment and structure
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A* Back     alignment and structure
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A* Back     alignment and structure
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A* Back     alignment and structure
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A* Back     alignment and structure
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ... Back     alignment and structure
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A* Back     alignment and structure
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens} Back     alignment and structure
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A Back     alignment and structure
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8 Back     alignment and structure
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A* Back     alignment and structure
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1} Back     alignment and structure
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A* Back     alignment and structure
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A* Back     alignment and structure
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens} Back     alignment and structure
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A* Back     alignment and structure
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A* Back     alignment and structure
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A* Back     alignment and structure
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A* Back     alignment and structure
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A Back     alignment and structure
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A* Back     alignment and structure
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A* Back     alignment and structure
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B* Back     alignment and structure
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A* Back     alignment and structure
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1 Back     alignment and structure
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A Back     alignment and structure
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum} Back     alignment and structure
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A* Back     alignment and structure
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii} Back     alignment and structure
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2 Back     alignment and structure
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B* Back     alignment and structure
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A* Back     alignment and structure
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A* Back     alignment and structure
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A Back     alignment and structure
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis} Back     alignment and structure
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A* Back     alignment and structure
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A* Back     alignment and structure
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B* Back     alignment and structure
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A* Back     alignment and structure
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A* Back     alignment and structure
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A* Back     alignment and structure
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D* Back     alignment and structure
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A* Back     alignment and structure
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ... Back     alignment and structure
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A Back     alignment and structure
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A* Back     alignment and structure
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A Back     alignment and structure
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV} Back     alignment and structure
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens} Back     alignment and structure
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A* Back     alignment and structure
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A* Back     alignment and structure
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8 Back     alignment and structure
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens} Back     alignment and structure
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A* Back     alignment and structure
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens} Back     alignment and structure
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C Back     alignment and structure
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A* Back     alignment and structure
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens} Back     alignment and structure
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B* Back     alignment and structure
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens} Back     alignment and structure
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A* Back     alignment and structure
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A* Back     alignment and structure
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B* Back     alignment and structure
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum} Back     alignment and structure
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A Back     alignment and structure
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens} Back     alignment and structure
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A* Back     alignment and structure
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A* Back     alignment and structure
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A Back     alignment and structure
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8 Back     alignment and structure
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A* Back     alignment and structure
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus} Back     alignment and structure
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila} Back     alignment and structure
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A* Back     alignment and structure
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens} Back     alignment and structure
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A Back     alignment and structure
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens} Back     alignment and structure
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A* Back     alignment and structure
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2 Back     alignment and structure
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens} Back     alignment and structure
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A* Back     alignment and structure
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens} Back     alignment and structure
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum} Back     alignment and structure
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A* Back     alignment and structure
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927} Back     alignment and structure
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1 Back     alignment and structure
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A* Back     alignment and structure
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A* Back     alignment and structure
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A Back     alignment and structure
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A* Back     alignment and structure
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens} Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A Back     alignment and structure
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F Back     alignment and structure
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A* Back     alignment and structure
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori} Back     alignment and structure
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A* Back     alignment and structure
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 369
d1g8pa_333 c.37.1.20 (A:) ATPase subunit of magnesium chelata 1e-85
d1ny5a2247 c.37.1.20 (A:138-384) Transcriptional activator si 3e-05
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Length = 333 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: ATPase subunit of magnesium chelatase, BchI
species: Rhodobacter capsulatus [TaxId: 1061]

 Score =  260 bits (665), Expect = 1e-85
 Identities = 165/339 (48%), Positives = 222/339 (65%), Gaps = 7/339 (2%)

Query: 30  RPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVG 89
           RPV+PF+AIVGQE+MKL LLL  +DP IGGV++ GDRGTGKST VR+L  LLP I+ V G
Sbjct: 1   RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEG 60

Query: 90  DPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTE 149
            P +S   +                  ++      +VDLPLG +EDRV G +DIE+A+++
Sbjct: 61  CPVSSPNVEMIP-------DWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISK 113

Query: 150 GVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFIL 209
           G KAFEPGLLA+ANRG LY+DE NLL+DH+VD+LLD A SG N VER+G+SI HPARF+L
Sbjct: 114 GEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVL 173

Query: 210 IGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAEQA 269
           +GSGNPEEG+LRPQLLDRFG+  +V + RD E RV+++  R  +D +PK F + ++ +  
Sbjct: 174 VGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDM 233

Query: 270 KLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKV 329
            ++ QI  AR  LP V+  +      + +C  L  DGLRG++   R+A+ALAAL+G   V
Sbjct: 234 DIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAV 293

Query: 330 SAEDIATVMPNCLRHRLRKDPLESIDSGLLIIEKFYEVF 368
             + +  V    L HRLR+DPL+   S   +     E  
Sbjct: 294 GRDHLKRVATMALSHRLRRDPLDEAGSTARVARTVEETL 332
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Length = 247 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
d1g8pa_333 ATPase subunit of magnesium chelatase, BchI {Rhodo 100.0
d1in4a2238 Holliday junction helicase RuvB {Thermotoga mariti 99.78
d1ixsb2239 Holliday junction helicase RuvB {Thermus thermophi 99.77
d1njfa_239 delta prime subunit of DNA polymerase III, N-domai 99.76
d1ixza_247 AAA domain of cell division protein FtsH {Thermus 99.73
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 99.73
d1lv7a_256 AAA domain of cell division protein FtsH {Escheric 99.72
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 99.69
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 99.69
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 99.68
d1r6bx3315 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 99.68
d1um8a_364 ClpX {Helicobacter pylori [TaxId: 210]} 99.64
d1sxje2252 Replication factor C5 {Baker's yeast (Saccharomyce 99.62
d1ofha_309 HslU {Haemophilus influenzae [TaxId: 727]} 99.62
d1qvra3315 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 99.61
d1ny5a2247 Transcriptional activator sigm54 (NtrC1), C-termin 99.61
d1r6bx2268 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 99.6
d1e32a2258 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 99.6
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 99.6
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 99.47
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 99.44
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 99.41
d1qvra2387 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 99.4
d1a5ta2207 delta prime subunit of DNA polymerase III, N-domai 99.39
d2awna2232 Maltose transport protein MalK, N-terminal domain 99.29
d1v43a3239 Hypothetical protein PH0022, N-terminal domain {Py 99.27
d1g41a_443 HslU {Haemophilus influenzae [TaxId: 727]} 99.24
d3d31a2229 Sulfate/molybdate ABC transporter, ATP-binding pro 99.23
d1d2na_246 Hexamerization domain of N-ethylmalemide-sensitive 99.22
d1vpla_238 Putative ABC transporter TM0544 {Thermotoga mariti 99.21
d1g2912240 Maltose transport protein MalK, N-terminal domain 99.19
d1jbka_195 ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} 99.19
d1g6ha_254 MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 99.18
d1w44a_321 NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} 99.18
d1ji0a_240 Branched chain aminoacid ABC transporter {Thermoto 99.17
d1oxxk2242 Glucose transport protein GlcV, N-terminal domain 99.13
d2onka1240 Molybdate/tungstate import ATP-binding protein Wtp 99.1
d1l2ta_230 MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 99.07
d1b0ua_258 ATP-binding subunit of the histidine permease {Sal 99.05
d2hyda1255 Putative multidrug export ATP-binding/permease pro 99.04
d2pmka1241 Haemolysin B ATP-binding protein {Escherichia coli 99.04
d3dhwc1240 Methionine import ATP-binding protein MetN {Escher 99.02
d3b60a1253 Multidrug resistance ABC transporter MsbA, C-termi 99.01
d1mv5a_242 Multidrug resistance ABC transporter LmrA, C-termi 98.99
d1jj7a_251 Peptide transporter Tap1, C-terminal ABC domain {H 98.99
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 98.97
d1sgwa_200 Putative ABC transporter PF0895 {Pyrococcus furios 98.91
d2gnoa2198 gamma subunit of DNA polymerase III, N-domain {The 98.87
d1r0wa_281 Cystic fibrosis transmembrane conductance regulato 98.81
d1l7vc_231 ABC transporter involved in vitamin B12 uptake, Bt 98.74
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 98.55
d1svma_362 Papillomavirus large T antigen helicase domain {Si 98.42
d1tuea_205 Replication protein E1 helicase domain {Human papi 97.96
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 97.88
d1u0ja_267 Rep 40 protein helicase domain {Adeno-associated v 97.7
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 97.67
d1kaga_169 Shikimate kinase (AroK) {Escherichia coli [TaxId: 97.67
d2i3ba1189 Cancer-related NTPase, C1orf57 {Human (Homo sapien 97.61
d1zp6a1176 Hypothetical protein Atu3015 {Agrobacterium tumefa 97.6
d2fnaa2283 Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ 97.59
d1lw7a2192 Transcriptional regulator NadR, ribosylnicotinamid 97.59
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 97.57
d2bdta1176 Hypothetical protein BH3686 {Bacillus halodurans [ 97.56
d1y63a_174 Probable kinase LmjF30.1890 {Leishmania major [Tax 97.53
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 97.51
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 97.46
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 97.35
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 97.32
d1zina1182 Adenylate kinase {Bacillus stearothermophilus [Tax 97.29
d1ukza_196 Uridylate kinase {Baker's yeast (Saccharomyces cer 97.28
d1e6ca_170 Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax 97.28
d2iyva1165 Shikimate kinase (AroK) {Mycobacterium tuberculosi 97.26
d1w36d1359 Exodeoxyribonuclease V alpha chain (RecD) {Escheri 97.26
d1viaa_161 Shikimate kinase (AroK) {Campylobacter jejuni [Tax 97.25
d1zaka1189 Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} 97.24
d1qf9a_194 UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 97.24
d1ak2a1190 Adenylate kinase {Cow (Bos taurus), mitochondrial 97.22
d2cdna1181 Adenylate kinase {Mycobacterium tuberculosis [TaxI 97.19
d1s3ga1182 Adenylate kinase {Bacillus globisporus [TaxId: 145 97.19
d1rz3a_198 Hypothetical protein rbstp0775 {Bacillus stearothe 97.13
d2ak3a1189 Adenylate kinase {Cow (Bos taurus), mitochondrial 97.12
d1akya1180 Adenylate kinase {Baker's yeast (Saccharomyces cer 97.12
d1teva_194 UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] 97.1
d3adka_194 Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} 97.1
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 97.08
d1e4va1179 Adenylate kinase {Escherichia coli [TaxId: 562]} 97.07
d1np6a_170 Molybdopterin-guanine dinucleotide biosynthesis pr 97.06
d1a1va1136 HCV helicase domain {Human hepatitis C virus (HCV) 97.03
d1yj5a2172 5' polynucleotide kinase-3' phosphatase, C-termina 97.03
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 97.01
d1znwa1182 Guanylate kinase {Mycobacterium tuberculosis [TaxI 96.96
d1bifa1213 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 96.91
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 96.77
d1ckea_225 CMP kinase {Escherichia coli [TaxId: 562]} 96.76
d1g6oa_323 Hexameric traffic ATPase, HP0525 {Helicobacter pyl 96.76
d1gkya_186 Guanylate kinase {Baker's yeast (Saccharomyces cer 96.75
d1q3ta_223 CMP kinase {Streptococcus pneumoniae [TaxId: 1313] 96.7
d1lvga_190 Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 96.65
d2qtvb1166 SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta 96.52
d1m7ga_208 Adenosine-5'phosphosulfate kinase (APS kinase) {Fu 96.51
d1uj2a_213 Uridine-cytidine kinase 2 {Human (Homo sapiens) [T 96.49
d1s96a_205 Guanylate kinase {Escherichia coli [TaxId: 562]} 96.49
d1r8sa_160 ADP-ribosylation factor {Human (Homo sapiens), ARF 96.24
d1xjca_165 Molybdopterin-guanine dinucleotide biosynthesis pr 96.23
d2a5yb3277 CED-4, NB-ARC domain {Caenorhabditis elegans [TaxI 96.19
d1kgda_178 Guanylate kinase-like domain of Cask {Human (Homo 96.19
d1wb9a2234 DNA repair protein MutS, the C-terminal domain {Es 96.08
d1f6ba_186 SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 96.03
d1upta_169 ADP-ribosylation factor {Human (Homo sapiens), ARL 95.92
d1n0wa_242 DNA repair protein Rad51, catalytic domain {Human 95.87
d1htwa_158 Hypothetical protein HI0065 {Haemophilus influenza 95.82
d1ksha_165 ADP-ribosylation factor {Mouse (Mus musculus), ARL 95.8
d2vp4a1197 Deoxyribonucleoside kinase {Fruit fly (Drosophila 95.78
d1szpa2251 DNA repair protein Rad51, catalytic domain {Baker' 95.78
d1vmaa2213 GTPase domain of the signal recognition particle r 95.77
d1yrba1244 ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss 95.75
d1svia_195 Probable GTPase EngB {Bacillus subtilis [TaxId: 14 95.71
d1uf9a_191 Dephospho-CoA kinase {Thermus thermophilus [TaxId: 95.71
d2cxxa1184 GTP-binding protein engB {Pyrococcus horikoshii [T 95.7
d1mkya1171 Probable GTPase Der, N-terminal and middle domains 95.7
g1f2t.1292 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 95.67
d4tmka_210 Thymidylate kinase {Escherichia coli [TaxId: 562]} 95.65
d1okkd2207 GTPase domain of the signal recognition particle r 95.65
d1pzna2254 DNA repair protein Rad51, catalytic domain {Archae 95.62
d1nrjb_209 Signal recognition particle receptor beta-subunit 95.58
d1nn5a_209 Thymidylate kinase {Human (Homo sapiens) [TaxId: 9 95.58
d2gj8a1161 Probable tRNA modification GTPase TrmE (MnmE), G d 95.57
g1xew.1329 Smc head domain {Pyrococcus furiosus [TaxId: 2261] 95.54
d1ls1a2207 GTPase domain of the signal sequence recognition p 95.53
d1u0la2225 Probable GTPase EngC (YjeQ), C-terminal domain {Th 95.51
d1zj6a1177 ADP-ribosylation factor {Human (Homo sapiens), ARL 95.51
g1ii8.1369 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 95.47
d1v5wa_258 Meiotic recombination protein DMC1/LIM15 homolog { 95.46
d1ewqa2224 DNA repair protein MutS, the C-terminal domain {Th 95.45
d1j8yf2211 GTPase domain of the signal sequence recognition p 95.37
d1egaa1179 GTPase Era, N-terminal domain {Escherichia coli [T 95.36
d2a5ja1173 Rab2b {Human (Homo sapiens) [TaxId: 9606]} 95.36
d1z2aa1164 Rab23 {Mouse (Mus musculus) [TaxId: 10090]} 95.36
d1sq5a_308 Pantothenate kinase PanK {Escherichia coli [TaxId: 95.35
d2qy9a2211 GTPase domain of the signal recognition particle r 95.35
d2p67a1327 LAO/AO transport system kinase ArgK {Escherichia c 95.31
d1zd9a1164 ADP-ribosylation factor {Human (Homo sapiens), ARL 95.3
d1tf7a2242 Circadian clock protein KaiC {Synechococcus sp. st 95.28
d1wf3a1178 GTPase Era, N-terminal domain {Thermus thermophilu 95.28
d2fh5b1207 Signal recognition particle receptor beta-subunit 95.25
d2f7sa1186 Rab27b {Human (Homo sapiens) [TaxId: 9606]} 95.23
d3raba_169 Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} 95.22
d1qhla_222 Cell division protein MukB {Escherichia coli [TaxI 95.16
d1lnza2185 Obg GTP-binding protein middle domain {Bacillus su 95.13
d1ky3a_175 Rab-related protein ypt7p {Baker's yeast (Saccharo 95.11
d2f9la1175 Rab11b {Human (Homo sapiens) [TaxId: 9606]} 95.11
d1kaoa_167 Rap2a {Human (Homo sapiens) [TaxId: 9606]} 95.1
d1z0fa1166 Rab14 {Human (Homo sapiens) [TaxId: 9606]} 95.1
d1ctqa_166 cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9 95.06
d1vhta_208 Dephospho-CoA kinase {Escherichia coli [TaxId: 562 95.04
d2ew1a1171 Rab30 {Human (Homo sapiens) [TaxId: 9606]} 95.03
d1jjva_205 Dephospho-CoA kinase {Haemophilus influenzae [TaxI 95.03
d1kkma_176 HPr kinase HprK C-terminal domain {Lactobacillus c 95.02
d1fzqa_176 ADP-ribosylation factor {Mouse (Mus musculus), ARL 95.01
d1p5zb_241 Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 95.01
d1knxa2177 HPr kinase HprK C-terminal domain {Mycoplasma pneu 95.0
d2erya1171 r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 94.99
d2qm8a1323 Metallochaperone MeaB {Methylobacterium extorquens 94.97
d2fn4a1173 r-Ras {Human (Homo sapiens) [TaxId: 9606]} 94.97
d2i1qa2258 DNA repair protein Rad51, catalytic domain {Archae 94.95
d2erxa1171 di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 94.94
d2atva1168 Ras-like estrogen-regulated growth inhibitor, RERG 94.93
d1e69a_308 Smc head domain {Thermotoga maritima [TaxId: 2336] 94.91
d1gsia_208 Thymidylate kinase {Mycobacterium tuberculosis [Ta 94.88
d1g16a_166 Rab-related protein Sec4 {Baker's yeast (Saccharom 94.85
d1uaaa1306 DEXX box DNA helicase {Escherichia coli, RepD [Tax 94.84
d1z08a1167 Rab21 {Human (Homo sapiens) [TaxId: 9606]} 94.83
d1xtqa1167 GTP-binding protein RheB {Human (Homo sapiens) [Ta 94.82
d1tmka_214 Thymidylate kinase {Baker's yeast (Saccharomyces c 94.82
d1r2qa_170 Rab5a {Human (Homo sapiens) [TaxId: 9606]} 94.79
d1vg8a_184 Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} 94.77
d1z06a1165 Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} 94.76
d2gjsa1168 Rad {Human (Homo sapiens) [TaxId: 9606]} 94.75
d1a7ja_288 Phosphoribulokinase {Rhodobacter sphaeroides [TaxI 94.73
d1yzqa1164 Rab6 {Human (Homo sapiens) [TaxId: 9606]} 94.72
d1odfa_286 Hypothetical protein Ygr205W {Baker's yeast (Sacch 94.68
d1puia_188 Probable GTPase EngB {Escherichia coli [TaxId: 562 94.67
d2bmea1174 Rab4a {Human (Homo sapiens) [TaxId: 9606]} 94.66
d1udxa2180 Obg GTP-binding protein middle domain {Thermus the 94.63
d1z0ja1167 Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} 94.6
d1e0sa_173 ADP-ribosylation factor {Human (Homo sapiens), ARF 94.6
d1pjra1318 DEXX box DNA helicase {Bacillus stearothermophilus 94.56
d1wmsa_174 Rab9a {Human (Homo sapiens) [TaxId: 9606]} 94.56
d1kmqa_177 RhoA {Human (Homo sapiens) [TaxId: 9606]} 94.55
d1mkya2186 Probable GTPase Der, N-terminal and middle domains 94.55
d2g3ya1172 GTP-binding protein GEM {Human (Homo sapiens) [Tax 94.51
d1tf7a1242 Circadian clock protein KaiC {Synechococcus sp. st 94.5
d2g6ba1170 Rab26 {Human (Homo sapiens) [TaxId: 9606]} 94.46
d2bcgy1194 GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisi 94.44
d1ko7a2169 HPr kinase HprK C-terminal domain {Staphylococcus 94.44
d1ek0a_170 Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [T 94.43
d1x3sa1177 Rab18 {Human (Homo sapiens) [TaxId: 9606]} 94.42
d1moza_182 ADP-ribosylation factor {Baker's yeast (Saccharomy 94.37
d1u8za_168 Ras-related protein RalA {Cotton-top tamarin (Sagu 94.34
d1c1ya_167 Rap1A {Human (Homo sapiens) [TaxId: 9606]} 94.34
d1xzpa2160 TrmE GTPase domain {Thermotoga maritima [TaxId: 23 94.32
d2ocpa1241 Deoxyguanosine kinase {Human (Homo sapiens) [TaxId 94.25
d1mh1a_183 Rac {Human (Homo sapiens) [TaxId: 9606]} 94.2
d1h65a_257 Chloroplast protein translocon GTPase Toc34 {Garde 94.17
d1i2ma_170 Ran {Human (Homo sapiens) [TaxId: 9606]} 94.11
d1cr2a_277 Gene 4 protein (g4p, DNA primase), helicase domain 94.1
d1m7ba_179 RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} 94.06
d1x1ra1169 Ras-related protein M-Ras (XRas) {Mouse (Mus muscu 94.06
d2fu5c1173 Rab8a {Mouse (Mus musculus) [TaxId: 10090]} 94.05
d1deka_241 Deoxynucleoside monophosphate kinase {Bacteriophag 93.92
d1w1wa_427 Smc head domain {Baker's yeast (Saccharomyces cere 93.91
d1t9ha2231 Probable GTPase EngC (YjeQ), C-terminal domain {Ba 93.84
d2atxa1185 RhoQ {Human (Homo sapiens) [TaxId: 9606]} 93.82
d2ngra_191 CDC42 {Human (Homo sapiens) [TaxId: 9606]} 93.78
d1nlfa_274 Hexameric replicative helicase repA {Escherichia c 93.69
d1zcba2200 Transducin (alpha subunit) {Mouse (Mus musculus) [ 93.48
d1azta2221 Transducin (alpha subunit) {Cow (Bos taurus) [TaxI 93.02
d2bmja1175 Centaurin gamma 1, G domain {Human (Homo sapiens) 92.88
d1xpua3289 Transcription termination factor Rho, ATPase domai 92.74
d1u94a1263 RecA protein, ATPase-domain {Escherichia coli [Tax 92.64
d1wb1a4179 Elongation factor SelB, N-terminal domain {Methano 92.56
d2bcjq2200 Transducin (alpha subunit) {Mouse (Mus musculus) [ 92.03
d1yksa1140 YFV helicase domain {Yellow fever virus [TaxId: 11 91.26
d1svsa1195 Transducin (alpha subunit) {Rat (Rattus norvegicus 91.23
d1e9ra_433 Bacterial conjugative coupling protein TrwB {Esche 91.03
d2eyqa3233 Transcription-repair coupling factor, TRCF {Escher 90.97
d1mo6a1269 RecA protein, ATPase-domain {Mycobacterium tubercu 90.8
d1tq4a_400 Interferon-inducible GTPase {Mouse (Mus musculus) 90.76
d1nija1222 Hypothetical protein YjiA, N-terminal domain {Esch 90.61
d1xp8a1268 RecA protein, ATPase-domain {Deinococcus radiodura 90.61
d1p6xa_333 Thymidine kinase {Equine herpesvirus type 4 [TaxId 90.54
d1oywa2206 RecQ helicase domain {Escherichia coli [TaxId: 562 90.37
d2p6ra3202 Hel308 helicase {Archaeoglobus fulgidus [TaxId: 22 89.84
d1osna_331 Thymidine kinase {Varicella-zoster virus [TaxId: 1 89.66
d1e2ka_329 Thymidine kinase {Herpes simplex virus type 1, dif 89.54
d1wp9a1200 putative ATP-dependent RNA helicase PF2015 {Pyroco 89.27
d2jdid3276 Central domain of beta subunit of F1 ATP synthase 89.12
d1g8fa3122 ATP sulfurylase C-terminal domain {Baker's yeast ( 89.08
d1htaa_68 Archaeal histone {Archaeon Methanothermus fervidus 88.86
d2fz4a1206 DNA repair protein RAD25 {Archaeoglobus fulgidus [ 87.98
d1ni3a1296 YchF GTP-binding protein N-terminal domain {Fissio 87.84
d1gkub1237 Helicase-like "domain" of reverse gyrase {Archaeon 87.08
d1wxqa1319 GTP-binding protein PH0525 {Pyrococcus horikoshii 86.88
d1g7sa4227 Initiation factor IF2/eIF5b, N-terminal (G) domain 86.75
d1jala1278 YchF GTP-binding protein N-terminal domain {Haemop 86.58
g1qhh.1 623 DEXX box DNA helicase {Bacillus stearothermophilus 86.17
g1f2t.1292 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 85.75
d1gm5a3264 RecG helicase domain {Thermotoga maritima [TaxId: 85.48
d2dy1a2267 Elongation factor G (EF-G), N-terminal (G) domain 84.7
d2jdia3285 Central domain of alpha subunit of F1 ATP synthase 84.53
d1ihua2279 Arsenite-translocating ATPase ArsA {Escherichia co 84.32
d1xbta1133 Thymidine kinase, TK1, N-terminal domain {Human (H 83.58
d2bv3a2276 Elongation factor G (EF-G), N-terminal (G) domain 82.87
d1ku5a_66 Archaeal histone {Archaeon (Pyrococcus horikoshii) 82.57
d1ihua1296 Arsenite-translocating ATPase ArsA {Escherichia co 82.53
d1f5na2277 Interferon-induced guanylate-binding protein 1 (GB 81.54
g1ii8.1369 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 81.06
d1j3ba1318 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxalo 80.86
d1fx0a3276 Central domain of alpha subunit of F1 ATP synthase 80.42
d2c78a3204 Elongation factor Tu (EF-Tu), N-terminal (G) domai 80.27
d2olra1313 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxalo 80.13
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: ATPase subunit of magnesium chelatase, BchI
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=100.00  E-value=2e-43  Score=329.29  Aligned_cols=332  Identities=50%  Similarity=0.831  Sum_probs=264.5

Q ss_pred             CCCCCCccccChHHHHHHhhhhhccCCCCeeEEecCCCCChhHHHHHHHhccCcceeecCCCCCCCCCCcchhhhhhhhh
Q 017575           30 RPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRES  109 (369)
Q Consensus        30 ~~~~~~~~i~G~~~~~~~l~~~l~~~~~g~vlL~Gp~G~GKTtla~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (369)
                      +|.++|++|+||+.+++++.++.+.++.||+||+||||||||++||.++.++++........+......+   ..+....
T Consensus         1 ~~~~~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~~---~~~~~~~   77 (333)
T d1g8pa_           1 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEM---IPDWATV   77 (333)
T ss_dssp             CCCCCGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGG---SCTTCCC
T ss_pred             CCCCChhhccCcHHHHHHHHHHHhccCCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCcccc---ccchhhc
Confidence            5788999999999999999888765455669999999999999999999999876543333333221100   0000000


Q ss_pred             hhccccchhhhhccccccCCCCCchHhhhcccchhHHhhhcccccccchhhhcCCCeEEEeCCCCCCHHHHHHHHHHHhc
Q 017575          110 VVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAAS  189 (369)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~a~~~vl~lDE~~~l~~~~~~~L~~~l~~  189 (369)
                          ..........+++..+.+.+...+.|.++....+.+|...+.+|.+..++++|+|+||++++++++++.|++.|++
T Consensus        78 ----~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~~~~~~~aLl~~me~  153 (333)
T d1g8pa_          78 ----LSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQS  153 (333)
T ss_dssp             ----SCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHHHHH
T ss_pred             ----cccCcccccCceeeccCCCCcccccCcchhhhccccCcceeeccccccccccEeecccHHHHHHHHHHHHhhhhcC
Confidence                0000000112344556677888999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceeeecceeeeecCceEEEeecCCCCCCCCHhHHhhhccceeecCCCCHHHHHHHHHHhhhccCCChHHHhhhHHHHH
Q 017575          190 GWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAEQA  269 (369)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~li~t~n~~~~~l~~al~~R~~~~i~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~  269 (369)
                      +++++.+.|..+.+|.+|++++|+||+++.++++++|||++++.+.+|.+.+....+...+......+..+.........
T Consensus       154 ~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (333)
T d1g8pa_         154 GENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDM  233 (333)
T ss_dssp             SEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             CeEEecccCceecCCCCEEEEEecCccccccccchhhhhcceeeccCcchhhHHHHHHHhhhhcccChHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999988888888887766666666666666666666


Q ss_pred             HHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHcCCCCCchhHHHHHHHHHHHHHcCCCCCCHHHHHHHHhHHhcccccCC
Q 017575          270 KLQQQIASARSSLPAVQIDHDLKVKISKVCAELNVDGLRGDIVSNRAAKALAALKGRDKVSAEDIATVMPNCLRHRLRKD  349 (369)
Q Consensus       270 ~~~~~i~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~s~R~~~~ll~~a~a~A~l~~~~~v~~~~i~~a~~~vl~~r~~~~  349 (369)
                      .+.+.+..+......+.++++...++...+...+..|.|+...++++|+++|+++|++.|+++|+.+|+..+|.||+..+
T Consensus       234 ~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvArtiA~L~gr~~V~~~di~~a~~lvL~hR~~~~  313 (333)
T d1g8pa_         234 DIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRRD  313 (333)
T ss_dssp             HHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHHHGGGCC--
T ss_pred             HHHHHHHHHhhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhhccCC
Confidence            77777878887888899999999999999988888899999999999999999999999999999999999999999999


Q ss_pred             CCCCCChhHHHHHHHHhhh
Q 017575          350 PLESIDSGLLIIEKFYEVF  368 (369)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~  368 (369)
                      |.++.+..+-|++++.++|
T Consensus       314 p~~e~~~~~~v~~~i~~~~  332 (333)
T d1g8pa_         314 PLDEAGSTARVARTVEETL  332 (333)
T ss_dssp             ----------CHHHHHHHC
T ss_pred             hhhhccCccHHHHHHHhhC
Confidence            9888777777888888776
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} Back     information, alignment and structure
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} Back     information, alignment and structure
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} Back     information, alignment and structure
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} Back     information, alignment and structure
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} Back     information, alignment and structure
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} Back     information, alignment and structure
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]} Back     information, alignment and structure
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]} Back     information, alignment and structure
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]} Back     information, alignment and structure
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]} Back     information, alignment and structure
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]} Back     information, alignment and structure
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} Back     information, alignment and structure
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]} Back     information, alignment and structure
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]} Back     information, alignment and structure
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]} Back     information, alignment and structure
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]} Back     information, alignment and structure
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} Back     information, alignment and structure
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Back     information, alignment and structure
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]} Back     information, alignment and structure
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]} Back     information, alignment and structure
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} Back     information, alignment and structure
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]} Back     information, alignment and structure
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} Back     information, alignment and structure
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]} Back     information, alignment and structure
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]} Back     information, alignment and structure
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]} Back     information, alignment and structure
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]} Back     information, alignment and structure
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]} Back     information, alignment and structure
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]} Back     information, alignment and structure
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]} Back     information, alignment and structure
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure