Citrus Sinensis ID: 017582


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFDISVDGLKRLNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHHHHHcccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccc
cccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccc
masaraftlsrittntntntgasfnplhlprapfsrnhhhhhdvirwptrrglfpasysatvsclssgggvsnddfvstrksnfdRGFRVIANMLKriepldnsviskgiseSAKDSMKQTISSMlgllpsdqfsitvrlskqplhSLLVSSIITGYTLWNAEYRISLMRNFdisvdglkrlnfsvegevldkhceeseneggeisvedleispqvlgdLSHDALNYIQKLQSDLSNVKEELNSMkhknmlmeSDKTCRNSLLEYLRFldpymvkelsqpssiEVEEIIHQLVQNILQRFfkddasnnfkghsiftnaenleevnnenchsiDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
masaraftlsrittntntntgasfnPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMlkriepldnsviSKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFDISVDGLKRLNFSVEGEVLDKHCeeseneggeisvEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMkhknmlmesdKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
MASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFDISVDGLKRLNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTnaenleevnnenCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
*********************************************RWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLD***********************LGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFDISVDGLKRLNFSVEGEVLDK*********************QVLGDLSHDALNYIQK**************************TCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVG**
**********RITTNTNT*************************************************************************ANMLKRIEPLDNS*********AKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISL*****************************************************HDALNYIQKLQ******************************LEYLRFLDP**********SIEVEEIIHQLVQNILQRFFKDDA**********************NCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
MASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFDISVDGLKRLNFSVEGEVLDK***********ISVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
*****AFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRW***************************************GFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFDI******************************************LGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKD***********************ENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFDISVDGLKRLNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYxxxxxxxxxxxxxxxxxxxxxxxxxxxxKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
225452642366 PREDICTED: uncharacterized protein LOC10 0.951 0.959 0.624 1e-119
255552754352 hypothetical protein RCOM_0852780 [Ricin 0.945 0.991 0.589 1e-110
15242177355 uncharacterized protein [Arabidopsis tha 0.948 0.985 0.567 1e-101
21536629355 seed maturation-like protein [Arabidopsi 0.948 0.985 0.564 1e-101
297807513355 hypothetical protein ARALYDRAFT_488341 [ 0.948 0.985 0.559 1e-100
365222904368 Hop-interacting protein THI043 [Solanum 0.943 0.945 0.568 1e-99
449524296346 PREDICTED: uncharacterized protein LOC10 0.915 0.976 0.571 4e-94
449459502368 PREDICTED: uncharacterized protein LOC10 0.910 0.913 0.575 1e-93
356571994354 PREDICTED: uncharacterized protein LOC10 0.818 0.853 0.582 2e-92
356550358353 PREDICTED: uncharacterized protein LOC10 0.823 0.861 0.588 8e-92
>gi|225452642|ref|XP_002281888.1| PREDICTED: uncharacterized protein LOC100254161 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/381 (62%), Positives = 278/381 (72%), Gaps = 30/381 (7%)

Query: 2   ASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYS-- 59
           A+ARAF LSR+T         S  P H P  PFSR+             R L PAS +  
Sbjct: 3   ATARAFLLSRVTD-------PSLRPHHAPLPPFSRHL----------LARPLLPASAALK 45

Query: 60  ----ATVSCLSSG--GGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISES 113
               A + CL SG  GG  +DDFVSTRKS FDRGF VIANMLKRIEPLDNSVISKG+S+S
Sbjct: 46  RRPPALLCCLVSGVDGGGVSDDFVSTRKSGFDRGFSVIANMLKRIEPLDNSVISKGVSDS 105

Query: 114 AKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFD 173
           A+DSMKQTIS+MLGLLPSDQFS+TVR+SK+PL  LL SSIITGYTLWNAEYRISLMRNFD
Sbjct: 106 ARDSMKQTISTMLGLLPSDQFSVTVRVSKRPLDRLLASSIITGYTLWNAEYRISLMRNFD 165

Query: 174 ISVDGLKRLNFSVEGEVLDKHCEESENEGGEI----SVEDLEISPQ-VLGDLSHDALNYI 228
           IS D LKR N S + EVL+   EE++  GGE+    S+ED E S    LGDL  +ALNYI
Sbjct: 166 ISPDSLKRSNCSEQCEVLELQSEETKCGGGEVDVNGSMEDWEPSSAWSLGDLPPEALNYI 225

Query: 229 QKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEI 288
           QKL+S+LS  K+EL++ K +NM ME ++   N+LLEYLR L+  MV ELS+PSS+EVEEI
Sbjct: 226 QKLESELSTAKKELDAQKQENMQMEYERGNNNNLLEYLRGLESDMVIELSKPSSLEVEEI 285

Query: 289 IHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCML 348
           IHQLVQNIL RFFKDD +++F   S      N ++ N E+C +I TSRDYLAKLLFWCML
Sbjct: 286 IHQLVQNILPRFFKDDPTSDFMEDSALGITGNYQDGNGESCETICTSRDYLAKLLFWCML 345

Query: 349 LGHHLRGLENRLHLTCAVGLL 369
           LGHHLRGLENRLHL+C VGLL
Sbjct: 346 LGHHLRGLENRLHLSCVVGLL 366




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552754|ref|XP_002517420.1| hypothetical protein RCOM_0852780 [Ricinus communis] gi|223543431|gb|EEF44962.1| hypothetical protein RCOM_0852780 [Ricinus communis] Back     alignment and taxonomy information
>gi|15242177|ref|NP_197001.1| uncharacterized protein [Arabidopsis thaliana] gi|9755664|emb|CAC01816.1| seed maturation-like protein [Arabidopsis thaliana] gi|22655278|gb|AAM98229.1| seed maturation-like protein [Arabidopsis thaliana] gi|30984588|gb|AAP42757.1| At4g33110 [Arabidopsis thaliana] gi|332004714|gb|AED92097.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21536629|gb|AAM60961.1| seed maturation-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297807513|ref|XP_002871640.1| hypothetical protein ARALYDRAFT_488341 [Arabidopsis lyrata subsp. lyrata] gi|297317477|gb|EFH47899.1| hypothetical protein ARALYDRAFT_488341 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|365222904|gb|AEW69804.1| Hop-interacting protein THI043 [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|449524296|ref|XP_004169159.1| PREDICTED: uncharacterized protein LOC101224200, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|449459502|ref|XP_004147485.1| PREDICTED: uncharacterized protein LOC101208572 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356571994|ref|XP_003554155.1| PREDICTED: uncharacterized protein LOC100778484 [Glycine max] Back     alignment and taxonomy information
>gi|356550358|ref|XP_003543554.1| PREDICTED: uncharacterized protein LOC100809010 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
TAIR|locus:2147875355 AT5G14970 "AT5G14970" [Arabido 0.943 0.980 0.572 1e-93
TAIR|locus:2060495386 AT2G14910 [Arabidopsis thalian 0.612 0.585 0.406 5.5e-38
TAIR|locus:2026669341 AT1G63610 "AT1G63610" [Arabido 0.457 0.495 0.234 8.7e-10
GENEDB_PFALCIPARUM|PFE1330c796 PFE1330c "hypothetical protein 0.447 0.207 0.232 1.1e-05
UNIPROTKB|Q8I3J8796 PFE1330c "Putative uncharacter 0.447 0.207 0.232 1.1e-05
TAIR|locus:2147875 AT5G14970 "AT5G14970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
 Identities = 213/372 (57%), Positives = 262/372 (70%)

Query:     2 ASARAF-TLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSA 60
             ASARAF  LSR+T  +          LH P  P S + H     + +   R +   S SA
Sbjct:     4 ASARAFFMLSRVTDLSKKKL-----ILHQP--PPSSSPHR----LPYAPNRAV---SSSA 49

Query:    61 TVSCLSSGGGVSNDD-FVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMK 119
              +SCLS GGGVS+DD +VSTR+S  DRGF VIAN++ RI+PLD SVISKG+S+SAKDSMK
Sbjct:    50 VISCLS-GGGVSSDDSYVSTRRSKLDRGFAVIANLVNRIQPLDTSVISKGLSDSAKDSMK 108

Query:   120 QTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRISLMRNFDISVDGL 179
             QTISSMLGLLPSDQFS++V +S+QPL+ LL+SSIITGYTLWNAEYR+SL RNFDI +D  
Sbjct:   109 QTISSMLGLLPSDQFSVSVTISEQPLYRLLISSIITGYTLWNAEYRVSLRRNFDIPIDPR 168

Query:   180 KRLNFSVEGEVLDKHCEESENEGGEISVEDLE-ISPQVLGDLSHDALNYIQKLQSDLSNV 238
             K        + +    E+  +E     VE+ E +SPQV GDLS +AL+YIQ LQS+LS++
Sbjct:   169 KEEEDQSSKDNVRFGSEKGMSEDLGNCVEEFERLSPQVFGDLSPEALSYIQLLQSELSSM 228

Query:   239 KEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQ 298
             KEEL+S K K + +E +K  RN LL+YLR LDP MV ELSQ SS EVEEI++QLVQN+L+
Sbjct:   229 KEELDSQKKKALRIECEKGNRNDLLDYLRSLDPEMVTELSQLSSPEVEEIVNQLVQNVLE 288

Query:   299 RFFKDDASNNF-KGHSIFTXXXXXXXXXXXXCHSIDTSRDYLAKLLFWCMLLGHHLRGLE 357
             R F+D  ++NF +   I T               +DTSRDYLAKLLFWCMLLGHHLRGLE
Sbjct:   289 RLFEDQTTSNFMQNPGIRTTEGGDGTG-----RKVDTSRDYLAKLLFWCMLLGHHLRGLE 343

Query:   358 NRLHLTCAVGLL 369
             NRLHL+C VGLL
Sbjct:   344 NRLHLSCVVGLL 355




GO:0000023 "maltose metabolic process" evidence=RCA
GO:0015996 "chlorophyll catabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
TAIR|locus:2060495 AT2G14910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026669 AT1G63610 "AT1G63610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFE1330c PFE1330c "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8I3J8 PFE1330c "Putative uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
pfam0554285 pfam05542, DUF760, Protein of unknown function (DU 6e-21
pfam0554285 pfam05542, DUF760, Protein of unknown function (DU 2e-14
>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760) Back     alignment and domain information
 Score = 85.7 bits (213), Expect = 6e-21
 Identities = 28/81 (34%), Positives = 49/81 (60%)

Query: 93  NMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSS 152
             ++ + P   + ++   S    ++M++ +S +LG LPSD F +T++ S++ L  LL SS
Sbjct: 5   QYIQSLPPETLARLADSASPEVLEAMRRNVSGLLGSLPSDHFEVTIQTSRENLAQLLASS 64

Query: 153 IITGYTLWNAEYRISLMRNFD 173
           ++TGY L NAE R+ L R+  
Sbjct: 65  MMTGYFLRNAEQRLELERSLG 85


This family contains several uncharacterized plant proteins. Length = 85

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 369
PF0554286 DUF760: Protein of unknown function (DUF760); Inte 99.97
PF0554286 DUF760: Protein of unknown function (DUF760); Inte 99.94
>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins Back     alignment and domain information
Probab=99.97  E-value=5.7e-32  Score=220.02  Aligned_cols=85  Identities=36%  Similarity=0.564  Sum_probs=83.6

Q ss_pred             hHHHHHhhhcCCchhhhhcccCCHHHHHHHHHHHHHHhcCC-CCCCceeEEEeccccHHHHHHHHHhHhHhhcchhhhhh
Q 017582           89 RVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLL-PSDQFSITVRLSKQPLHSLLVSSIITGYTLWNAEYRIS  167 (369)
Q Consensus        89 n~L~~yv~s~~Pe~~~~~sk~~Spev~e~i~~~v~~lLG~l-p~~~f~v~i~tsre~L~~LlassmMtGYfLrnaE~Rl~  167 (369)
                      |.||+||++++|+.+++|+++|||||+|+|++||++|||.+ |+++|+++|+|+|++||+||+|+|||||||||||||++
T Consensus         1 n~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~p~~~~~~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~   80 (86)
T PF05542_consen    1 NDLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLSPSDQFNVTIQTSRENLAQLLAWSMMTGYFLRNAEQRLE   80 (86)
T ss_pred             ChHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCCCcccCcceeEECHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             hhhhcc
Q 017582          168 LMRNFD  173 (369)
Q Consensus       168 Le~sl~  173 (369)
                      ||++|+
T Consensus        81 Le~sL~   86 (86)
T PF05542_consen   81 LERSLK   86 (86)
T ss_pred             HHHhcC
Confidence            999985



>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 72.6 bits (177), Expect = 6e-14
 Identities = 56/424 (13%), Positives = 120/424 (28%), Gaps = 142/424 (33%)

Query: 19  NTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLF---PASYSATV--------SCLSS 67
           N    F   ++ R          +  +R    + L    PA     +        + ++ 
Sbjct: 121 NDNQVFAKYNVSR-------LQPYLKLR----QALLELRPAKN-VLIDGVLGSGKTWVAL 168

Query: 68  GGGVSNDDFVSTRKSNFDRG---------------FRVIANMLKRIEPLDNSVISKGISE 112
              V     V   +   D                   ++  +L +I+P   S      + 
Sbjct: 169 D--VCLSYKV---QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 113 SAK-DSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGYTL---WNAEYRISL 168
             +  S++  +  +L              SK   + LLV        L    NA+     
Sbjct: 224 KLRIHSIQAELRRLL-------------KSKPYENCLLV--------LLNVQNAK----A 258

Query: 169 MRNFDIS---------------VDGLKRLNFSVEGEVLDKHCEESENEG-----GEISVE 208
              F++S               +      + S++           E +       +   +
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH--SMTLTPDEVKSLLLKYLDCRPQ 316

Query: 209 DL-----EISPQVL---GDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRN 260
           DL       +P+ L    +   D L      +         +N  K   ++    ++  N
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWK--------HVNCDKLTTII----ESSLN 364

Query: 261 SLLEYL---RFLD----------PYMVKEL--SQPSSIEVEEIIHQLVQNILQRFFKDDA 305
            L        F            P ++  L        +V  ++++L +  L    K   
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL--VEKQPK 422

Query: 306 SNNFKGHSIF----TNAENLEEVNNE--NCHSIDTSRDYLAKLL-----FWCMLLGHHLR 354
            +     SI+       EN   ++    + ++I  + D    +      ++   +GHHL+
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 355 GLEN 358
            +E+
Sbjct: 483 NIEH 486


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 82.09
1hlo_A80 Protein (transcription factor MAX); transcriptiona 80.55
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Back     alignment and structure
Probab=82.09  E-value=0.88  Score=35.47  Aligned_cols=31  Identities=23%  Similarity=0.480  Sum_probs=26.5

Q ss_pred             hhHHHHHHHHHhhHHhHHHHHHhhhhhhhcc
Q 017582          222 HDALNYIQKLQSDLSNVKEELNSMKHKNMLM  252 (369)
Q Consensus       222 ~eA~~YI~~Lqsel~sl~keL~~~k~~~~~l  252 (369)
                      -.|.+||..|+.++..++.|+.++++++..|
T Consensus        43 ~~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L   73 (83)
T 1nkp_B           43 DKATEYIQYMRRKNHTHQQDIDDLKRQNALL   73 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4699999999999999999999998765544



>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00