Citrus Sinensis ID: 017679

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MMMMARRTMRRMVGATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHcccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHcHHHHHHHHccEEcEEEccccccHHHHHHHHHHHcccccccEEEEEccccccccHHHHHHccccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHcccEEEEcccccccHHHHHccccEEEEEccccccccccccccccEEEEccccccccccccccccccEEEcccccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHcccccHHccccccccHHHHHHHcccccccccccccccccccccccccccccccccHHccEEEEcHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHHHHHccEEEEEEEcccccHHHHHHHHHHHHHcccccEEEEcccccccccHHHHHHcccHHHEcccccHHHHHHHHccccccccccHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHcccEEEEEccccccHHHHHccccEEEEcccccccEcHHHcccccEEEEccccccEEEEcccccccEEEEccEcHHHHcccccEEcccccccccHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MMMMARRTMRRMVGATAWPWAWATRSLnlsaindnriimspplitldlpeiwtppnsrdcnplpqrncsnlqtatvIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSnynqdssingilvqlplpqhldegkilDAVSlekdvdgfhplnignlamrgreplfipctpkgCIELLIRSGVEIMGKNAVVIGrsnivglptslllqRHHATVSIVHAltknpeqitSEADIVIAAAGVANLvrgswlkpgavvldvgtcpvdvsvdpsceygyrlmgDVCYEEAMRLASvitpvpggvgpMTVAMLLSNTLDSAKRAYGFT
Flexible Loop (DISEMBL)
MMMMARRTMRRMVGATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQtatvidgksiaEEIRSGIDKEvrrmkksigkvpglavilvgerrdsqtyvrnkikaceevgiKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTldsakraygft
Low Complexity Region (SEG)
mmmmarrtmrrmVGATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT
Disordered region (IsUnstruct)
**********RMVGATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTP*************CSNLQTATVIDGKSIAEEIR*GI***VRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNT***********
Disordered Region (DISOPRED)
**************************************************************************TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF*
Disordered Region (DISEMBL)
**********RMVGATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT
Disordered Region (DISPRO)
********************AWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMMMARRTMRRMVGATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	368	2.2.26 [Sep-21-2011]
Q8Y7C5	284	Bifunctional protein FolD	yes	no	0.755	0.978	0.496	1e-77
Q92BZ4	284	Bifunctional protein FolD	yes	no	0.755	0.978	0.5	2e-77
C1L2R6	284	Bifunctional protein FolD	yes	no	0.755	0.978	0.5	3e-77
B8DFW8	284	Bifunctional protein FolD	yes	no	0.755	0.978	0.496	4e-77
Q71ZW2	284	Bifunctional protein FolD	yes	no	0.755	0.978	0.5	6e-77
A0LE04	285	Bifunctional protein FolD	yes	no	0.763	0.985	0.527	1e-75
Q2RIB4	280	Bifunctional protein FolD	yes	no	0.755	0.992	0.506	2e-73
C0ZC05	284	Bifunctional protein FolD	yes	no	0.752	0.975	0.494	3e-73
A1BF67	295	Bifunctional protein FolD	yes	no	0.774	0.966	0.486	1e-72
A0AIG1	284	Bifunctional protein FolD	yes	no	0.755	0.978	0.489	3e-72

>sp|Q8Y7C5|FOLD_LISMO Bifunctional protein FolD OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=folD PE=3 SV=1

 Score =  290 bits (742), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 144/290 (49%), Positives = 207/290 (71%), Gaps = 12/290 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK +A+EI+  + +EV  + K  GK PGLAV+LVG+ + S+TYVRNK K  EE G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELVKE-GKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S++ E  +  TE+++L+ +   N+D +I+GILVQLPLP+H+ E K++D +S +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISFDKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P+N+GNL + G++  F+PCTP G IEL+  +G +I GK AVVIGRSNIVG P + LL   
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV+I H+ TK+  Q+  EADI++ A G+A  V+  ++KPGA+V+DVG           
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGM---------D 231

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
            +   +L GDV +++ ++ A  ITPVPGGVGPMT+ MLL+NTL +AKR +
Sbjct: 232 RDENNKLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 9

>sp|Q92BZ4|FOLD_LISIN Bifunctional protein FolD OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=folD PE=3 SV=1

 Score =  290 bits (741), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 205/290 (70%), Gaps = 12/290 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK +A+EI+  +  EV  + K  GK PGLAV+LVG+ + S+TYVRNK K  EE G+K
Sbjct: 4   IIDGKKLAKEIQEKVTSEVAELVKQ-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S++ E  +  TE+++L  +   N+D++I+GILVQLPLP+H+ E K++DA+S +KDVDGFH
Sbjct: 63  SVLIELPETVTEEKLLKVVEELNEDNTIHGILVQLPLPKHISEEKVIDAISFDKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P+N+GNL + G++  F+PCTP G IEL+  +G +I GK AVVIGRSNIVG P + LL   
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV+I H+ TK+  Q+  EADI++ A G+A  V+  ++KPGA+V+DVG           
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKEYIKPGAIVIDVGM---------D 231

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
            +   +L GDV +++    A  ITPVPGGVGPMT+ MLL+NTL +AKR +
Sbjct: 232 RDENNKLCGDVDFDDVKEQAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria innocua serovar 6a (strain CLIP 11262) (taxid: 272626)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|C1L2R6|FOLD_LISMC Bifunctional protein FolD OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=folD PE=3 SV=1

 Score =  289 bits (739), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 206/290 (71%), Gaps = 12/290 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK +A+EI+  + +EV  + K  GK PGLAV+LVG+ + S+TYVRNK K  EE G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S++ E  +  TE+++L+ +   N+D +I+GILVQLPLP+H+ E K++D +S +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P+N+GNL + G++  F+PCTP G IEL+  +G +I GK AVVIGRSNIVG P + LL   
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV+I H+ TK+  Q+  EADI++ A G+A  V+  ++KPGAVV+DVG           
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVVIDVGM---------D 231

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
            +   +L GDV +++ +  A  ITPVPGGVGPMT+ MLL+NTL +AKR +
Sbjct: 232 RDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria monocytogenes serotype 4b (strain Clip81459) (taxid: 568819)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|B8DFW8|FOLD_LISMH Bifunctional protein FolD OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=folD PE=3 SV=1

 Score =  288 bits (738), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 144/290 (49%), Positives = 206/290 (71%), Gaps = 12/290 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK +A+EI+  + +EV  + K  GK PGLAV+LVG+ + S+TYVRNK K  EE G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S++ E  +  TE+++L+ +   N+D +I+GILVQLPLP+H+ E K++D +S +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P+N+GNL + G++  F+PCTP G IEL+  +G +I GK AVVIGRSNIVG P + LL   
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV+I H+ TK+  Q+  EADI++ A G+A  V+  ++KPGA+V+DVG           
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGM---------D 231

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
            +   +L GDV +++ +  A  ITPVPGGVGPMT+ MLL+NTL +AKR +
Sbjct: 232 RDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria monocytogenes serotype 4a (strain HCC23) (taxid: 552536)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|Q71ZW2|FOLD_LISMF Bifunctional protein FolD OS=Listeria monocytogenes serotype 4b (strain F2365) GN=folD PE=3 SV=1

 Score =  288 bits (736), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 206/290 (71%), Gaps = 12/290 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK +A+EI+  + +EV  + K  GK PGLAV+LVG+ + S+TYVRNK K  EE G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S++ E  +  TE+++L+ +   N+D +I+GILVQLPLP+H+ E K++D +S +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P+N+GNL + G++  F+PCTP G IEL+  +G +I GK AVVIGRSNIVG P + LL   
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLIE 180

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV+I H+ TK+  Q+  EADI++ A G+A  V+  ++KPGAVV+DVG           
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVVIDVGM---------D 231

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
            +   +L GDV +++ +  A  ITPVPGGVGPMT+ MLL+NTL +AKR +
Sbjct: 232 RDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria monocytogenes serotype 4b (strain F2365) (taxid: 265669)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|A0LE04|FOLD_MAGSM Bifunctional protein FolD OS=Magnetococcus sp. (strain MC-1) GN=folD PE=3 SV=1

 Score =  283 bits (725), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 195/292 (66%), Gaps = 11/292 (3%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           A VIDGK+IA+ +R  +  EV R+K +    PGLAV+LVG    SQ YVRNK +ACE  G
Sbjct: 2   AHVIDGKAIAQSVREELRMEVERLKLNHQLTPGLAVVLVGADPASQVYVRNKKRACETAG 61

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
           I S   E A   ++ E+L  +   NQD +++GILVQLPLP+H+DE K+L+A+S  KD DG
Sbjct: 62  IASFSHELAATTSQAELLALIEQLNQDDAVHGILVQLPLPKHIDEQKVLEAISPSKDADG 121

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           FHP N+G L     +P F PCTP G +E+L  SGV+  GK+AVVIGRSNIVG P +L+L 
Sbjct: 122 FHPYNVGRLVT--GDPTFQPCTPWGVMEMLKVSGVDPKGKHAVVIGRSNIVGKPVALMLL 179

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
             HATV+I H+ T +  +    ADIV+AA G AN+V GSW+K GAVV+DVG         
Sbjct: 180 AAHATVTICHSRTPDLAETVKRADIVVAAVGRANMVPGSWIKKGAVVIDVGIN------- 232

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
              E G +L GDV Y      AS ITPVPGGVGPMT+AMLL NT++ AKRA+
Sbjct: 233 -RGEDG-KLCGDVDYASCFEHASAITPVPGGVGPMTIAMLLKNTVEGAKRAH 282

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Magnetococcus sp. (strain MC-1) (taxid: 156889)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|Q2RIB4|FOLD_MOOTA Bifunctional protein FolD OS=Moorella thermoacetica (strain ATCC 39073) GN=folD PE=3 SV=1

 Score =  276 bits (705), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 147/290 (50%), Positives = 197/290 (67%), Gaps = 12/290 (4%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           A ++DGK IA E+R+ + +EV R+K   G  PGLAV+LVGE   SQ YVRNK +ACEEVG
Sbjct: 3   AQILDGKKIAAEVRAEVKEEVSRLKAE-GINPGLAVVLVGEDPASQVYVRNKHRACEEVG 61

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
           I S V       ++ E+L  +   N+D  I+GILVQLPLP H+DE K++DA++LEKDVDG
Sbjct: 62  IYSEVHRLPAATSQAELLKLIDQLNKDPKIHGILVQLPLPDHIDEKKVIDAIALEKDVDG 121

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           F P N+GNL +  +   F PCTP GC+ LL ++G++  GK AVV+GRSNIVG P +++L 
Sbjct: 122 FSPANVGNLVIGDK--CFYPCTPHGCMVLLEKAGIDPKGKKAVVVGRSNIVGKPVAMMLL 179

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
             HATV+I H+ T++      +ADI+IAA G   L+ G  +K GAVV+DVG   V     
Sbjct: 180 ARHATVTICHSRTRDLAAECRQADILIAAVGKPELITGDMIKEGAVVIDVGINRVGEK-- 237

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                  +L+GDV +E A + A  ITPVPGGVGPMT+AMLL NT+++A+R
Sbjct: 238 -------KLVGDVHFESAAQKAGWITPVPGGVGPMTIAMLLKNTVEAARR 280

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Moorella thermoacetica (strain ATCC 39073) (taxid: 264732)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|C0ZC05|FOLD_BREBN Bifunctional protein FolD OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=folD PE=3 SV=1

 Score =  275 bits (704), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 144/291 (49%), Positives = 207/291 (71%), Gaps = 14/291 (4%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           AT++ GK +A+ IR+ +  EV  +KK  G VPGL V++VG+   S +YVR K K CEEVG
Sbjct: 3   ATILQGKEVAQSIRAELANEVVELKKQ-GVVPGLTVVIVGDDPASHSYVRGKAKGCEEVG 61

Query: 134 IKS-IVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           I S I+ + AD  TE+E+L  +   N++ ++NGILVQLPLP H+ E  +++A++ EKDVD
Sbjct: 62  ISSEIIRKDAD-ITEEELLVIIQQLNENPNVNGILVQLPLPAHISEHAVIEAIAPEKDVD 120

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHP++IGN+ + G + +  PCTP G IEL+ R+G ++ GK+AVVIGRSNIVG P SLLL
Sbjct: 121 GFHPISIGNMVL-GNDTML-PCTPHGIIELIKRTGTQMAGKHAVVIGRSNIVGKPVSLLL 178

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
           Q+ +ATV++ H+ T+N E+ T +ADI++ A G A+++    +KPGAVV+DVG   ++   
Sbjct: 179 QQENATVTMCHSRTQNLEEYTQKADILVVATGRAHMIGKEHVKPGAVVIDVGVNRIETG- 237

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                   +L+GDV ++E   +AS ITPVPGGVGPMT+ MLL NT+ +AK+
Sbjct: 238 --------KLVGDVKFDEVKDVASFITPVPGGVGPMTITMLLKNTVAAAKK 280

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) (taxid: 358681)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|A1BF67|FOLD_CHLPD Bifunctional protein FolD OS=Chlorobium phaeobacteroides (strain DSM 266) GN=folD PE=3 SV=2

 Score =  273 bits (699), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 142/292 (48%), Positives = 195/292 (66%), Gaps = 7/292 (2%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK I++++++ +  +V   + SIGKVPGL VI+VG    SQ YVRNK K+C E+G+ 
Sbjct: 3   IIDGKKISQDLKNELKTDVAHFQASIGKVPGLTVIIVGHDPASQVYVRNKAKSCLEIGMH 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S V E      ++ +L A+   NQD +++GILVQ PLP+ +DE  +  A+   KDVDGFH
Sbjct: 63  STVIEMPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFAVTLAIDPSKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQR 254
           P N+G L M   +  F+ CTP G +ELL R  +E  GK+ VV+GRSNIVG P  +L++Q+
Sbjct: 123 PENLGRLVMGHLDKCFVSCTPYGILELLDRYNIETKGKHCVVVGRSNIVGKPMANLMMQK 182

Query: 255 HHA---TVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311
             A   TV++ H+ T++    T +ADI+IAA G A  +    +KPGAVV+DVG   ++  
Sbjct: 183 LDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKPGAVVIDVGINRIE-- 240

Query: 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
            DPS + GYRL+GDV Y+    LAS ITPVPGGVGPMT+AMLL NTL S +R
Sbjct: 241 -DPSTKSGYRLVGDVDYDGVAALASAITPVPGGVGPMTIAMLLKNTLQSFRR 291

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Chlorobium phaeobacteroides (strain DSM 266) (taxid: 290317)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

>sp|A0AIG1|FOLD_LISW6 Bifunctional protein FolD OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=folD PE=3 SV=1

 Score =  272 bits (696), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 142/290 (48%), Positives = 203/290 (70%), Gaps = 12/290 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDG+ +A+EI+  +  EV  + K I K PGLAV+LVG+ + S+TYVRNK K  EE G+K
Sbjct: 4   IIDGEKLAKEIQERVTTEVAELAK-IDKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S++ E  +  +E+++L  +   N D +I+GILVQLPLP+H+ E K++D +S +KDVDGFH
Sbjct: 63  SVLIELPETVSEEKLLEVVEELNTDDTIHGILVQLPLPKHISEEKVIDTISYDKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P+N+GNL + G++  F+PCTP G IEL+  +G +I GK AVVIGRSNIVG P + LL   
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV+I H+ TKN  ++  EADI++ A G+A  V+  ++KPGA+V+DVG           
Sbjct: 181 NATVTIAHSRTKNLPEVAKEADILVVATGLAKFVKKEYIKPGAIVIDVGM---------D 231

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
            +   +L GDV +++ +  A  ITPVPGGVGPMT+ MLL+NTL +AKR +
Sbjct: 232 RDENNKLCGDVDFDDVIEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281

Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) (taxid: 386043)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
147770970	362	hypothetical protein VITISV_024214 [Viti	0.902	0.917	0.750	1e-143
296085803	358	unnamed protein product [Vitis vinifera]	0.970	0.997	0.701	1e-143
225439037	355	PREDICTED: bifunctional protein FolD-lik	0.894	0.926	0.759	1e-142
255557907	358	methylenetetrahydrofolate dehydrogenase,	0.967	0.994	0.702	1e-141
449459574	357	PREDICTED: bifunctional protein FolD-lik	0.894	0.921	0.735	1e-139
449525075	357	PREDICTED: bifunctional protein FolD-lik	0.894	0.921	0.738	1e-139
356505416	361	PREDICTED: bifunctional protein FolD-lik	0.891	0.908	0.733	1e-137
388512035	361	unknown [Medicago truncatula]	0.923	0.941	0.720	1e-137
297823751	350	methylenetetrahydrofolate dehydrogenase	0.880	0.925	0.712	1e-135
30687594	352	amino acid dehydrogenase-like protein [A	0.953	0.997	0.657	1e-134

>gi|147770970|emb|CAN65246.1| hypothetical protein VITISV_024214 [Vitis vinifera]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 253/337 (75%), Positives = 292/337 (86%), Gaps = 5/337 (1%)

Query: 36  RIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVR 95
           +I  SPPL++LD P+IWTP NS D +  P +  SN QTA VIDGKSI+EEI SGI  EV 
Sbjct: 27  QIRKSPPLVSLDFPDIWTP-NSLDYDCSPIQKGSNEQTAAVIDGKSISEEIISGIASEVS 85

Query: 96  RMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALS 155
           RMK+SIGKVPGLAVILVG+RRDSQTYVRNKIKACEE GIKS++ E  + CTEDE+L+ALS
Sbjct: 86  RMKESIGKVPGLAVILVGQRRDSQTYVRNKIKACEEAGIKSLMAELPEDCTEDEILSALS 145

Query: 156 NYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCT 215
           ++N++ SI+GILVQLPLP+HLDE KIL+ VSLEKDVDGF+PLN+GNLAMRGREPLFIPCT
Sbjct: 146 SFNENPSIHGILVQLPLPKHLDEEKILNMVSLEKDVDGFNPLNMGNLAMRGREPLFIPCT 205

Query: 216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSE 275
            KGCIELL+RSGVEIMGK AVVIGRSNI GLPTSLLLQRHHATVSI+HAL+KNP+QIT +
Sbjct: 206 AKGCIELLLRSGVEIMGKKAVVIGRSNIAGLPTSLLLQRHHATVSILHALSKNPDQITRQ 265

Query: 276 ADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV----DPSCEYGYRLMGDVCYEEA 331
           ADIV+ A GV NLVRG WLKPGAVV+DVGT PV++ +    DPS E+GY L+GDVCYEEA
Sbjct: 266 ADIVVTAVGVPNLVRGHWLKPGAVVIDVGTYPVEIKLMDQQDPSSEFGYHLVGDVCYEEA 325

Query: 332 MRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 368
           + +AS +TPVPGGVGPMT+AMLLSNTLDSAKRAY  T
Sbjct: 326 LGVASAVTPVPGGVGPMTIAMLLSNTLDSAKRAYDIT 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085803|emb|CBI31127.3| unnamed protein product [Vitis vinifera]

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/369 (70%), Positives = 307/369 (83%), Gaps = 12/369 (3%)

Query: 1   MMMMARRTMRRMVGATAWPWAWATRSLNLSAIND-NRIIMSPPLITLDLPEIWTPPNSRD 59
           M +M ++ +++ + +T       +R++N    N   +I  SPPL++LD P+IWTP NS D
Sbjct: 1   MTVMWQKGLKKSMPST-------SRAVNTLKHNHCYQIRKSPPLVSLDFPDIWTP-NSLD 52

Query: 60  CNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQ 119
            +  P +  SN QTA VIDGKSI+EEI SGI  EV RMK+SIGKVPGLAVILVG+RRDSQ
Sbjct: 53  YDCSPIQKGSNEQTAAVIDGKSISEEIISGIASEVSRMKESIGKVPGLAVILVGQRRDSQ 112

Query: 120 TYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 179
           TYVRNKIKACEE GIKS++ E  + CTEDE+L+ALS++N++ SI+GILVQLPLP+HLDE 
Sbjct: 113 TYVRNKIKACEEAGIKSLMAELPEDCTEDEILSALSSFNENPSIHGILVQLPLPKHLDEE 172

Query: 180 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIG 239
           KIL+ VSLEKDVDGF+PLN+GNLAMRGREPLFIPCT KGCIELL+RSGVEIMGK AVVIG
Sbjct: 173 KILNMVSLEKDVDGFNPLNMGNLAMRGREPLFIPCTAKGCIELLLRSGVEIMGKKAVVIG 232

Query: 240 RSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAV 299
           RSNI GLPTSLLLQRHHATVSI+HAL+KNP+QIT +ADIV+ A GV NLVRG WLKPGAV
Sbjct: 233 RSNIAGLPTSLLLQRHHATVSILHALSKNPDQITRQADIVVTAVGVPNLVRGHWLKPGAV 292

Query: 300 VLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLD 359
           V+DVGT PV+   DPS E+GY L+GDVCYEEA+ +AS +TPVPGGVGPMT+AMLLSNTLD
Sbjct: 293 VIDVGTYPVE---DPSSEFGYHLVGDVCYEEALGVASAVTPVPGGVGPMTIAMLLSNTLD 349

Query: 360 SAKRAYGFT 368
           SAKRAY  T
Sbjct: 350 SAKRAYDIT 358

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439037|ref|XP_002264477.1| PREDICTED: bifunctional protein FolD-like [Vitis vinifera]

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/333 (75%), Positives = 290/333 (87%), Gaps = 4/333 (1%)

Query: 36  RIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVR 95
           +I  SPPL++LD P+IWTP NS D +  P +  SN QTA VIDGKSI+EEI SGI  EV 
Sbjct: 27  QIRKSPPLVSLDFPDIWTP-NSLDYDCSPIQKGSNEQTAAVIDGKSISEEIISGIASEVS 85

Query: 96  RMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALS 155
           RMK+SIGKVPGLAVILVG+RRDSQTYVRNKIKACEE GIKS++ E  + CTEDE+L+ALS
Sbjct: 86  RMKESIGKVPGLAVILVGQRRDSQTYVRNKIKACEEAGIKSLMAELPEDCTEDEILSALS 145

Query: 156 NYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCT 215
           ++N++ SI+GILVQLPLP+HLDE KIL+ VSLEKDVDGF+PLN+GNLAMRGREPLFIPCT
Sbjct: 146 SFNENPSIHGILVQLPLPKHLDEEKILNMVSLEKDVDGFNPLNMGNLAMRGREPLFIPCT 205

Query: 216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSE 275
            KGCIELL+RSGVEIMGK AVVIGRSNI GLPTSLLLQRHHATVSI+HAL+KNP+QIT +
Sbjct: 206 AKGCIELLLRSGVEIMGKKAVVIGRSNIAGLPTSLLLQRHHATVSILHALSKNPDQITRQ 265

Query: 276 ADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLA 335
           ADIV+ A GV NLVRG WLKPGAVV+DVGT PV+   DPS E+GY L+GDVCYEEA+ +A
Sbjct: 266 ADIVVTAVGVPNLVRGHWLKPGAVVIDVGTYPVE---DPSSEFGYHLVGDVCYEEALGVA 322

Query: 336 SVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 368
           S +TPVPGGVGPMT+AMLLSNTLDSAKRAY  T
Sbjct: 323 SAVTPVPGGVGPMTIAMLLSNTLDSAKRAYDIT 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557907|ref|XP_002519982.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis] gi|223540746|gb|EEF42306.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/366 (70%), Positives = 300/366 (81%), Gaps = 10/366 (2%)

Query: 3   MMARRTMRRMVGATAWPWAWATRSLNLSAINDNRIIMSP-PLITLDLPEIWTPPNSRDCN 61
           M A   MRR+        AW  + +    ++  +I+ SP  L++LDLPEIW P N  D +
Sbjct: 1   MRAMTVMRRL-REKGLAAAWQKKDIIRRELS-TQILKSPQSLVSLDLPEIWAPINY-DFH 57

Query: 62  PLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTY 121
            LP    SN Q A VIDGK IAEEIRS I  EVRRMK+SIGKVPGLAVILVG+RRDSQTY
Sbjct: 58  CLPS---SNEQDAVVIDGKLIAEEIRSTIAIEVRRMKESIGKVPGLAVILVGQRRDSQTY 114

Query: 122 VRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 181
           VRNKI AC+E GIKS++TE  + CTED V++A++++N+DSSI+G+LVQLPLPQHLDE KI
Sbjct: 115 VRNKISACDEAGIKSLITELPEDCTEDAVMDAVTSFNEDSSIHGVLVQLPLPQHLDENKI 174

Query: 182 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS 241
           L+ ++LEKDVDGFHPLN+GNLAMRGREPLFIPCTPKGC+ELLIRS VEI GKNAVVIGRS
Sbjct: 175 LNVLNLEKDVDGFHPLNMGNLAMRGREPLFIPCTPKGCVELLIRSDVEIKGKNAVVIGRS 234

Query: 242 NIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVL 301
           NIVGLPTSLLLQRHHATV++VHA T +PE+IT +ADIV+ AAGV NLVR +WLKPGAVV+
Sbjct: 235 NIVGLPTSLLLQRHHATVTVVHAFTNDPEEITRKADIVVTAAGVPNLVRNNWLKPGAVVI 294

Query: 302 DVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361
           DVGTCPV+   DPS E GYRL GDVCYEEA+++AS ITPVPGGVGPMT+AMLLSNTLDSA
Sbjct: 295 DVGTCPVE---DPSSECGYRLTGDVCYEEAVKVASAITPVPGGVGPMTIAMLLSNTLDSA 351

Query: 362 KRAYGF 367
           KR Y F
Sbjct: 352 KRTYNF 357

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459574|ref|XP_004147521.1| PREDICTED: bifunctional protein FolD-like [Cucumis sativus]

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/333 (73%), Positives = 285/333 (85%), Gaps = 4/333 (1%)

Query: 36  RIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVR 95
           +I+MSP L ++D P+IWT  +  D + +  ++  + QTATVIDG++IAEEI SGI  EVR
Sbjct: 29  QILMSPSLTSIDFPDIWTSSSCSDYSSI-TKSYDDQQTATVIDGRAIAEEITSGITSEVR 87

Query: 96  RMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALS 155
           RMK + G VPGLAVI+VG+RRDSQ YVRNKI ACEE GI S ++   + CTED+VLNALS
Sbjct: 88  RMKNATGNVPGLAVIMVGQRRDSQIYVRNKIAACEEAGIMSEISNLPEDCTEDQVLNALS 147

Query: 156 NYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCT 215
            +++D SI+GILVQLPLPQHLDE KIL++V LEKDVDGFHPLN+GNLAMRGREPLF+PCT
Sbjct: 148 RFHEDPSIHGILVQLPLPQHLDESKILNSVHLEKDVDGFHPLNMGNLAMRGREPLFLPCT 207

Query: 216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSE 275
           PKGC+ELLIRSGVEI GK AVVIGRSNIVGLPTSLLLQRHHATVSIVHA T+NPEQI  E
Sbjct: 208 PKGCVELLIRSGVEITGKRAVVIGRSNIVGLPTSLLLQRHHATVSIVHAFTRNPEQIARE 267

Query: 276 ADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLA 335
           ADIV+AAAGV NLVRGSWLKPGA+V+DVG  PV+   DPSCE+GYRL+GDVCYEEA R+A
Sbjct: 268 ADIVVAAAGVPNLVRGSWLKPGAIVIDVGINPVE---DPSCEFGYRLIGDVCYEEASRVA 324

Query: 336 SVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 368
           S ITPVPGGVGP+TVAMLL NTL+SAKRA+ FT
Sbjct: 325 SAITPVPGGVGPVTVAMLLLNTLESAKRAHNFT 357

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449525075|ref|XP_004169545.1| PREDICTED: bifunctional protein FolD-like [Cucumis sativus]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/333 (73%), Positives = 284/333 (85%), Gaps = 4/333 (1%)

Query: 36  RIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVR 95
           +I+MSP L ++D P+IWT  +  D + +  ++    QTATVIDG++IAEEI SGI  EVR
Sbjct: 29  QILMSPSLTSIDFPDIWTSSSCSDYSSI-TKSYDVQQTATVIDGRAIAEEITSGITSEVR 87

Query: 96  RMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALS 155
           RMK + G VPGLAVI+VG+RRDSQ YVRNKI ACEE GI S ++   + CTED+VLNALS
Sbjct: 88  RMKNATGNVPGLAVIMVGQRRDSQIYVRNKIAACEEAGIMSEISNLPEDCTEDQVLNALS 147

Query: 156 NYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCT 215
            +++D SI+GILVQLPLPQHLDE KIL++V LEKDVDGFHPLN+GNLAMRGREPLF+PCT
Sbjct: 148 RFHEDPSIHGILVQLPLPQHLDESKILNSVHLEKDVDGFHPLNMGNLAMRGREPLFLPCT 207

Query: 216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSE 275
           PKGCIELLIRSGVEI GK AVVIGRSNIVGLPTSLLLQRHHATVSIVHA T+NPEQI  E
Sbjct: 208 PKGCIELLIRSGVEITGKRAVVIGRSNIVGLPTSLLLQRHHATVSIVHAFTRNPEQIARE 267

Query: 276 ADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLA 335
           ADIV+AAAGV NLVRGSWLKPGA+V+DVG  PV+   DPSCE+GYRL+GDVCYEEA R+A
Sbjct: 268 ADIVVAAAGVPNLVRGSWLKPGAIVIDVGINPVE---DPSCEFGYRLIGDVCYEEASRVA 324

Query: 336 SVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 368
           S ITPVPGGVGP+TVAMLL NTL+SAKRA+ FT
Sbjct: 325 SAITPVPGGVGPVTVAMLLLNTLESAKRAHNFT 357

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505416|ref|XP_003521487.1| PREDICTED: bifunctional protein FolD-like [Glycine max]

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/334 (73%), Positives = 283/334 (84%), Gaps = 6/334 (1%)

Query: 36  RIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCS-NLQTATVIDGKSIAEEIRSGIDKEV 94
           +I+MSPPL +LDLP+IW+P +S  C  +P  + S N QT  V+DGK I+ EIRS I  +V
Sbjct: 33  QILMSPPLASLDLPDIWSPISS--CRSIPAIHKSFNEQTTVVLDGKLISMEIRSKIAAKV 90

Query: 95  RRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154
           R+MKK +GKVPGLAVILVG+RRDSQTYVRNKI ACEEVGIKS+VTE    C   +V NA+
Sbjct: 91  RQMKKGLGKVPGLAVILVGQRRDSQTYVRNKIMACEEVGIKSLVTELPTDCAVTDVQNAI 150

Query: 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPC 214
             +N+D SI+GILVQLPLPQHLDE K+LDAV LEKDVDGFHPLN+GNLA+RGREPLF PC
Sbjct: 151 MRFNKDPSIHGILVQLPLPQHLDEEKVLDAVCLEKDVDGFHPLNMGNLAIRGREPLFTPC 210

Query: 215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITS 274
           TPKGCIELLIRSGVEIMGK AVVIG SNIVGLP SLLLQRHHATV+++HA T+NPEQITS
Sbjct: 211 TPKGCIELLIRSGVEIMGKKAVVIGTSNIVGLPASLLLQRHHATVTVIHAFTQNPEQITS 270

Query: 275 EADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL 334
           EADIV++AAGV NLVRG+W+KPGA V+DVGT PV+   DP CE GYRL GDVCYEEA+++
Sbjct: 271 EADIVVSAAGVPNLVRGNWIKPGAAVIDVGTTPVE---DPGCEDGYRLAGDVCYEEAVKV 327

Query: 335 ASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 368
           AS+ITPVPGGVGPMTVAMLL NTLDSAKR   F+
Sbjct: 328 ASIITPVPGGVGPMTVAMLLCNTLDSAKRMLNFS 361

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512035|gb|AFK44079.1| unknown [Medicago truncatula]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/347 (72%), Positives = 290/347 (83%), Gaps = 7/347 (2%)

Query: 24  TRSLN-LSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCS-NLQTATVIDGKS 81
           TR L+ L     ++I+MSP L +LDLP+IWTP +S  C  +P  + S N QTATVIDGK 
Sbjct: 20  TRLLHTLKGHQSDQILMSPALASLDLPDIWTPNSS--CQSVPDIHKSFNEQTATVIDGKL 77

Query: 82  IAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEF 141
           +A EIRS I  +VR+MKK +GKVPGLAVILVG+RRDS TYVRNKI ACEEVG+KS+VTE 
Sbjct: 78  MATEIRSKIADQVRQMKKGLGKVPGLAVILVGQRRDSLTYVRNKIIACEEVGMKSVVTEL 137

Query: 142 ADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 201
              C + +V NA+  +N+D SI+GILVQLPLPQHLDE KILDAV LEKDVDGFHP+N+GN
Sbjct: 138 PTDCADADVQNAIMRFNKDPSIHGILVQLPLPQHLDEEKILDAVCLEKDVDGFHPVNMGN 197

Query: 202 LAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 261
           LA+RGREPLFIPCT K CIELLIRSGVEIMGK AVVIGRSNIVGLPTSLLLQRHHATV++
Sbjct: 198 LALRGREPLFIPCTTKACIELLIRSGVEIMGKKAVVIGRSNIVGLPTSLLLQRHHATVTV 257

Query: 262 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYR 321
           VHA T+NPEQITSEADIV++AAGV NLV G+W+K GA V+DVGT PV+   DPSCE GYR
Sbjct: 258 VHAFTENPEQITSEADIVVSAAGVPNLVCGNWIKSGATVIDVGTIPVE---DPSCEDGYR 314

Query: 322 LMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 368
           L+GDVC+EE +++ASVITPVPGGVGPMTV MLL NTLDSAKR + FT
Sbjct: 315 LVGDVCFEEVIKVASVITPVPGGVGPMTVTMLLVNTLDSAKRLFNFT 361

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823751|ref|XP_002879758.1| methylenetetrahydrofolate dehydrogenase [Arabidopsis lyrata subsp. lyrata] gi|297325597|gb|EFH56017.1| methylenetetrahydrofolate dehydrogenase [Arabidopsis lyrata subsp. lyrata]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/331 (71%), Positives = 278/331 (83%), Gaps = 7/331 (2%)

Query: 35  NRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEV 94
           + I++SPPL++LDLPE W P +    +P P  +    Q   VIDG  IAEEIR+ I  EV
Sbjct: 26  SSILVSPPLVSLDLPENWIPYS----DPPPPVSFETEQKTVVIDGNVIAEEIRTKISSEV 81

Query: 95  RRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154
           R+MKK++GKVPGLAV+LVG++RDSQTYVRNKIKACEE GIKSI+ E  + CTE ++L+ L
Sbjct: 82  RKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSILAELPEDCTEGQILSIL 141

Query: 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPC 214
             +N+D+SI+GILVQLPLPQHLDE KIL+ V LEKDVDGFHPLN+GNLAMRGREPLF+ C
Sbjct: 142 KKFNEDTSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSC 201

Query: 215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITS 274
           TPKGC+ELLIR+GVEI GKNAVVIGRSNIVGLP SLLLQRH ATVS VHA TK+PEQIT 
Sbjct: 202 TPKGCVELLIRAGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITR 261

Query: 275 EADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL 334
           +ADIVIAAAG+ +LVRGSWLKPGAVV+DVGT PV+   D SCE+GYRL+GDVCYEEA+ +
Sbjct: 262 KADIVIAAAGIPSLVRGSWLKPGAVVIDVGTSPVE---DSSCEFGYRLVGDVCYEEALGV 318

Query: 335 ASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
           AS ITPVPGGVGPMT+ MLL NTLD+AKR +
Sbjct: 319 ASAITPVPGGVGPMTITMLLCNTLDAAKRIF 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30687594|ref|NP_181400.2| amino acid dehydrogenase-like protein [Arabidopsis thaliana] gi|186506444|ref|NP_001118472.1| amino acid dehydrogenase-like protein [Arabidopsis thaliana] gi|124301168|gb|ABN04836.1| At2g38660 [Arabidopsis thaliana] gi|330254470|gb|AEC09564.1| amino acid dehydrogenase-like protein [Arabidopsis thaliana] gi|330254472|gb|AEC09566.1| amino acid dehydrogenase-like protein [Arabidopsis thaliana]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/365 (65%), Positives = 291/365 (79%), Gaps = 14/365 (3%)

Query: 1   MMMMARRTMRRMVGATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDC 60
           M+M+AR+ +     A    +  ATR ++  +     I++SPPL++LDLPE W P +    
Sbjct: 1   MLMIARKAL---ASAHTKAFRLATRDVHCFS----SILVSPPLVSLDLPENWIPYS---- 49

Query: 61  NPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQT 120
           +P P  +    Q   VIDG  IAEEIR+ I  EV +MKK++GKVPGLAV+LVGE+RDSQT
Sbjct: 50  DPPPPVSFETEQKTVVIDGNVIAEEIRTKIISEVGKMKKAVGKVPGLAVVLVGEQRDSQT 109

Query: 121 YVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 180
           YVRNKIKACEE GIKS++ E  + CTE ++++ L  +N+D+SI+GILVQLPLPQHL+E K
Sbjct: 110 YVRNKIKACEETGIKSVLAELPEDCTEGQIISVLRKFNEDTSIHGILVQLPLPQHLNESK 169

Query: 181 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGR 240
           IL+ V LEKDVDGFHPLN+GNLAMRGREPLF+ CTPKGC+ELLIR+GVEI GKNAVVIGR
Sbjct: 170 ILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGR 229

Query: 241 SNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVV 300
           SNIVGLP SLLLQRH ATVS VHA TK+PE IT +ADIVIAAAG+ NLVRGSWLKPGAVV
Sbjct: 230 SNIVGLPMSLLLQRHDATVSTVHAFTKDPEHITRKADIVIAAAGIPNLVRGSWLKPGAVV 289

Query: 301 LDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 360
           +DVGT PV+   D SCE+GYRL+GDVCYEEA+ +AS ITPVPGGVGPMT+ MLL NTL++
Sbjct: 290 IDVGTTPVE---DSSCEFGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLEA 346

Query: 361 AKRAY 365
           AKR +
Sbjct: 347 AKRIF 351

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
TAIR|locus:2064143	352	AT2G38660 [Arabidopsis thalian	0.875	0.914	0.705	1.9e-122
TAIR|locus:2127113	360	EMB3127 "EMBRYO DEFECTIVE 3127	0.790	0.808	0.690	9.2e-107
TAIR|locus:2082254	299	AT3G12290 [Arabidopsis thalian	0.801	0.986	0.610	2.7e-93
TAIR|locus:2127083	310	AT4G00600 [Arabidopsis thalian	0.690	0.819	0.609	1.6e-79
DICTYBASE|DDB_G0283121	292	DDB_G0283121 "methenyl tetrahy	0.758	0.955	0.531	7.3e-75
ASPGD|ASPL0000036964	1031	AN2998 [Emericella nidulans (t	0.839	0.299	0.495	1.6e-74
FB|FBgn0020385	968	pug "pugilist" [Drosophila mel	0.777	0.295	0.494	1.1e-70
SGD|S000000288	975	MIS1 "Mitochondrial C1-tetrahy	0.779	0.294	0.481	1.2e-67
CGD|CAL0000024	1025	MIS12 [Candida albicans (taxid	0.823	0.295	0.430	2.2e-67
UNIPROTKB|Q5AAF6	1025	MIS1 "Putative uncharacterized	0.823	0.295	0.430	2.2e-67

TAIR|locus:2064143 AT2G38660 [Arabidopsis thaliana (taxid:3702)]

 Score = 1204 (428.9 bits), Expect = 1.9e-122, P = 1.9e-122
 Identities = 232/329 (70%), Positives = 275/329 (83%)

Query:    37 IIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRR 96
             I++SPPL++LDLPE W P +    +P P  +    Q   VIDG  IAEEIR+ I  EV +
Sbjct:    30 ILVSPPLVSLDLPENWIPYS----DPPPPVSFETEQKTVVIDGNVIAEEIRTKIISEVGK 85

Query:    97 MKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSN 156
             MKK++GKVPGLAV+LVGE+RDSQTYVRNKIKACEE GIKS++ E  + CTE ++++ L  
Sbjct:    86 MKKAVGKVPGLAVVLVGEQRDSQTYVRNKIKACEETGIKSVLAELPEDCTEGQIISVLRK 145

Query:   157 YNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTP 216
             +N+D+SI+GILVQLPLPQHL+E KIL+ V LEKDVDGFHPLN+GNLAMRGREPLF+ CTP
Sbjct:   146 FNEDTSIHGILVQLPLPQHLNESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTP 205

Query:   217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEA 276
             KGC+ELLIR+GVEI GKNAVVIGRSNIVGLP SLLLQRH ATVS VHA TK+PE IT +A
Sbjct:   206 KGCVELLIRTGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEHITRKA 265

Query:   277 DIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLAS 336
             DIVIAAAG+ NLVRGSWLKPGAVV+DVGT PV+   D SCE+GYRL+GDVCYEEA+ +AS
Sbjct:   266 DIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVE---DSSCEFGYRLVGDVCYEEALGVAS 322

Query:   337 VITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
              ITPVPGGVGPMT+ MLL NTL++AKR +
Sbjct:   323 AITPVPGGVGPMTITMLLCNTLEAAKRIF 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2127113 EMB3127 "EMBRYO DEFECTIVE 3127" [Arabidopsis thaliana (taxid:3702)]

 Score = 1056 (376.8 bits), Expect = 9.2e-107, P = 9.2e-107
 Identities = 203/294 (69%), Positives = 243/294 (82%)

Query:    74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
             A VIDGK++A++IR  I  EV RMK+SIG +PGLAVILVG+R+DS TYVRNK KAC+ VG
Sbjct:    69 AIVIDGKAVAKKIRDEITIEVSRMKESIGVIPGLAVILVGDRKDSATYVRNKKKACDSVG 128

Query:   134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
             IKS     A+  +E+EVL ++S +N D S++GILVQLPLP H+DE  IL+AVS+EKDVDG
Sbjct:   129 IKSFEVRLAEDSSEEEVLKSVSGFNDDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDG 188

Query:   194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
             FHPLNIG LAMRGREPLF+PCTPKGCIELL R  +EI GK AVVIGRSNIVG+P +LLLQ
Sbjct:   189 FHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNIEIKGKRAVVIGRSNIVGMPAALLLQ 248

Query:   254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
             R  ATVSI+H+ TKNPE+IT EADI+I+A G  N+VRGSW+KPGAV++DVG  PV+   D
Sbjct:   249 REDATVSIIHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGAVLIDVGINPVE---D 305

Query:   314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367
             PS   GYRL+GD+CYEEA ++AS ITPVPGGVGPMT+AMLLSNTL SAKR + F
Sbjct:   306 PSAARGYRLVGDICYEEASKVASAITPVPGGVGPMTIAMLLSNTLTSAKRIHNF 359

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2082254 AT3G12290 [Arabidopsis thaliana (taxid:3702)]

 Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
 Identities = 182/298 (61%), Positives = 231/298 (77%)

Query:    69 SNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKA 128
             S+  TA +IDGK+IA  IRS I +EVR + +  GKVPGLAV++VG R+DSQTYV  K KA
Sbjct:     4 SSDHTAKIIDGKAIAHTIRSEIAEEVRGLSEKHGKVPGLAVVIVGSRKDSQTYVNTKRKA 63

Query:   129 CEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLE 188
             C EVGIKS      +  +E ++++ +   N +  ++GILVQLPLP+H++E  IL A+S++
Sbjct:    64 CAEVGIKSFDVGLPEEVSEADLISKVHELNSNPDVHGILVQLPLPKHINEEHILGAISID 123

Query:   189 KDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPT 248
             KDVDGFHPLNIG LAM+GREPLF+PCTPKGC+ELL RSGV+I G+ AVV+GRSNIVGLP 
Sbjct:   124 KDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLARSGVKIKGQRAVVVGRSNIVGLPV 183

Query:   249 SLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPV 308
             SLLL +  ATV+ VH+ TK+PE I  EADIVIAA G A++++G+W+KPGA V+DVGT  V
Sbjct:   184 SLLLLKADATVTTVHSHTKDPEAIIREADIVIAACGQAHMIKGNWIKPGAAVIDVGTNAV 243

Query:   309 DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
                 DPS + GYRL+GDV + EA ++A  ITPVPGGVGPMTVAMLL NT+D AKR +G
Sbjct:   244 S---DPSKKSGYRLVGDVDFAEASKVAGFITPVPGGVGPMTVAMLLRNTVDGAKRVFG 298

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2127083 AT4G00600 [Arabidopsis thaliana (taxid:3702)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 159/261 (60%), Positives = 201/261 (77%)

Query:   108 AVILVGERRDSQTYVRNKIKACEEVGIK-SIVTEFADGCTEDEVLNALSNYNQDSSINGI 166
             A+++ G+    +  +R+ IK  E   +K SI    A+  +E+EVL  +S +N D S++G+
Sbjct:    55 AIVIDGKAEAKK--IRDDIKI-EVSRMKESIGVVPAEDSSEEEVLKYVSGFNDDPSVHGV 111

Query:   167 LVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRS 226
             LVQLPLP H+DE  IL+AVS+EKDVDGFHPLNIG LAMRGREPLF+PCTPKGCIELL R 
Sbjct:   112 LVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRY 171

Query:   227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVA 286
              +E  GK AVVIGRSNIVG+P +LLLQ+  ATVSI+H+ T NPE++T +ADI+I+A G  
Sbjct:   172 NIEFKGKRAVVIGRSNIVGMPAALLLQKEDATVSIIHSRTMNPEELTRQADILISAVGKP 231

Query:   287 NLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVG 346
             N+VRGSW+KPGAV++DVG  PV+   DPS   G RL+GD+CY EA ++AS ITPVPG VG
Sbjct:   232 NMVRGSWIKPGAVLIDVGIKPVE---DPSAAGGERLVGDICYVEASKIASAITPVPGDVG 288

Query:   347 PMTVAMLLSNTLDSAKRAYGF 367
             PMT+AMLLSNTL SAKR + F
Sbjct:   289 PMTIAMLLSNTLTSAKRIHNF 309

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0055114 "oxidation-reduction process" evidence=IEA

DICTYBASE|DDB_G0283121 DDB_G0283121 "methenyl tetrahydrofolate cyclohydrolase / NADP-dependent methylene H4F dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
 Identities = 153/288 (53%), Positives = 203/288 (70%)

Query:    76 VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
             +IDGK I+ +++  I  E+  MK+   + P L VILVG+R+DSQTYVRNK K   ++GI 
Sbjct:    10 IIDGKEISSQVKESIKDEITLMKEKGLRAPCLVVILVGDRKDSQTYVRNKKKTASDLGIN 69

Query:   136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
             SI     +  T+ E+++ + +Y++   ++GILVQLPLP H++E  IL  +   KDVDGFH
Sbjct:    70 SIDILLPEQTTQQELIDLVQSYSKKDDVDGILVQLPLPSHINEEIILTQIDESKDVDGFH 129

Query:   196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
             P+NIG LAMRGR+  F PCTPKGCIE+L RSG+EI GKNAVV+GRSNIVGLP S+LL   
Sbjct:   130 PVNIGKLAMRGRKADFEPCTPKGCIEMLDRSGIEIAGKNAVVLGRSNIVGLPVSMLLLSR 189

Query:   256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
              ATV+I H+ T N ++   EADI++ A G A LV+  W+K GAVV+DVG     ++ D +
Sbjct:   190 DATVTICHSKTPNLKEKCREADILVVAIGKAKLVKKDWVKTGAVVIDVG-----MNTDEN 244

Query:   316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                  +L GDV Y E   +AS ITPVPGGVGPMT+AML+ NTL+SAK+
Sbjct:   245 ----NKLCGDVDYNEVKEVASYITPVPGGVGPMTIAMLMKNTLESAKK 288

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA;IBA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IBA

GO:0005829 "cytosol" evidence=IBA

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=IBA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ASPGD|ASPL0000036964 AN2998 [Emericella nidulans (taxid:162425)]

 Score = 730 (262.0 bits), Expect = 1.6e-74, Sum P(2) = 1.6e-74
 Identities = 158/319 (49%), Positives = 210/319 (65%)

Query:    53 TPPNSRDCNPLP--QRNCSNLQTATV---IDGKSIAEEIRSGIDKEVRRMKKSIGKV-PG 106
             +P + R+   LP  +R  S+   A V   IDG  IA++IR+G+  E++++++   +  P 
Sbjct:    69 SPESLRNFPALPCQRRTFSSTGVAMVAEKIDGTQIAKDIRAGLKDEIQKIQEINPRFKPS 128

Query:   107 LAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGI 166
             L +  VG+R DS TYVR K+KA EE  I   +  F +  T+ E+L  +S  N D S++GI
Sbjct:   129 LVIFQVGDRSDSSTYVRMKLKAAEEANILCKIVNFPESITQPEILQEISQANNDPSVHGI 188

Query:   167 LVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRS 226
             LVQLPLPQHL E  +  AV+ EKDVDGF  +NIG LA RG  PLF+PCTPK  + LL  S
Sbjct:   189 LVQLPLPQHLSEHAVTSAVADEKDVDGFGAINIGELAKRGGRPLFVPCTPKAVMVLLKAS 248

Query:   227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVA 286
             GV+  GK AVV+GRS+IVG P S LL+   ATV++ H+ T +      +ADIV+AA G  
Sbjct:   249 GVDPAGKEAVVLGRSDIVGSPVSYLLKNADATVTVCHSKTPDIASAVKKADIVVAAIGKT 308

Query:   287 NLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVG 346
               V+G W+KPGAVV+DVG   ++   D + + G RL+GDV YE A ++AS ITPVPGGVG
Sbjct:   309 EFVKGDWIKPGAVVIDVG---INYKPDSTKKSGQRLVGDVEYESASQVASKITPVPGGVG 365

Query:   347 PMTVAMLLSNTLDSAKRAY 365
             PMTVAMLL N + SAK AY
Sbjct:   366 PMTVAMLLENVVASAK-AY 383

GO:0006730 "one-carbon metabolic process" evidence=IEA;RCA

GO:0004329 "formate-tetrahydrofolate ligase activity" evidence=IEA;RCA

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=IEA;RCA

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA;RCA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003697 "single-stranded DNA binding" evidence=IEA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA

GO:0046656 "folic acid biosynthetic process" evidence=IEA

GO:0009257 "10-formyltetrahydrofolate biosynthetic process" evidence=IEA

FB|FBgn0020385 pug "pugilist" [Drosophila melanogaster (taxid:7227)]

 Score = 696 (250.1 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
 Identities = 145/293 (49%), Positives = 199/293 (67%)

Query:    74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGK-VPGLAVILVGERRDSQTYVRNKIKACEEV 132
             A +I G ++A+ IR  +  EV  M K +   VPGL ++ VG R DS  Y+R KIKA  E+
Sbjct:    38 AKIISGTAVAKSIREELRNEVTAMSKQLADFVPGLRIVQVGGREDSNVYIRMKIKAATEI 97

Query:   133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLP--QHLDEGKILDAVSLEKD 190
             GI +   +     TE E+L+ +++ N+D  ++GI+VQ+PL     +D  +I DAVS EKD
Sbjct:    98 GIDAAHVQLPRSITEVELLDKINDLNEDPRVHGIIVQMPLDCDTPIDSHRITDAVSPEKD 157

Query:   191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSL 250
             VDG H +N G LA+ G    F+PCTP GC+EL+ RSGVEI G  AVV+GRS IVG P + 
Sbjct:   158 VDGLHTVNEGRLAI-GDLGGFLPCTPWGCLELIRRSGVEIAGARAVVLGRSKIVGTPAAE 216

Query:   251 LLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310
             LL+  +ATV++ H+ T+N E+IT  ADI++   GVA +V+GSW+KPGAVV+D   C ++V
Sbjct:   217 LLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVID---CGINV 273

Query:   311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
               D S   G +L+GDV Y EA+++A  +TPVPGGVGPMTVAML+ NT+ SA R
Sbjct:   274 KPDASKASGSKLVGDVDYAEALQVAGHLTPVPGGVGPMTVAMLMKNTVRSAAR 326

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=ISS;IBA

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=ISS;IBA

GO:0004329 "formate-tetrahydrofolate ligase activity" evidence=ISS;IBA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

GO:0006730 "one-carbon metabolic process" evidence=IBA

GO:0005829 "cytosol" evidence=IBA

SGD|S000000288 MIS1 "Mitochondrial C1-tetrahydrofolate synthase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 688 (247.2 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 140/291 (48%), Positives = 198/291 (68%)

Query:    76 VIDGKSIAEEIRSGIDKEVRRMK-KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
             ++ G+ +A+ IR   + E++ +K K     P L +I VG R DS TYVR K+KA ++  +
Sbjct:    37 ILSGRKLAQSIREKANDEIQAIKLKHPNFKPTLKIIQVGARPDSSTYVRMKLKASKDSNV 96

Query:   135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
               I+ +     TE E+L  +S+ N D SI+G+L+QLPLP+HLDE  I +AV  +KDVDGF
Sbjct:    97 DCIIEKLPAEITEVELLKKISDINDDDSIHGLLIQLPLPRHLDETTITNAVDFKKDVDGF 156

Query:   195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR 254
             H  N G LA +G +P FIPCTP GC++LL  + V++ GKNAVV+GRS+IVG P + LL+ 
Sbjct:   157 HRYNAGELAKKGGKPYFIPCTPYGCMKLLEEAHVKLDGKNAVVLGRSSIVGNPIASLLKN 216

Query:   255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
              +ATV++ H+ T+N  ++ S+ADIVIAA G+   V+  W+K GAVV+DVG   ++   D 
Sbjct:   217 ANATVTVCHSHTRNIAEVVSQADIVIAACGIPQYVKSDWIKEGAVVIDVG---INYVPDI 273

Query:   315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
             S + G +L+GDV ++      S ITPVPGGVGPMTVAML+SN L +AKR +
Sbjct:   274 SKKSGQKLVGDVDFDSVKEKTSYITPVPGGVGPMTVAMLVSNVLLAAKRQF 324

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0004329 "formate-tetrahydrofolate ligase activity" evidence=IEA;IDA

GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=IEA;IDA

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA;IDA

GO:0000105 "histidine biosynthetic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006164 "purine nucleotide biosynthetic process" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0046656 "folic acid biosynthetic process" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0009086 "methionine biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0006139 "nucleobase-containing compound metabolic process" evidence=IMP

CGD|CAL0000024 MIS12 [Candida albicans (taxid:5476)]

 Score = 669 (240.6 bits), Expect = 2.2e-67, Sum P(2) = 2.2e-67
 Identities = 137/318 (43%), Positives = 199/318 (62%)

Query:    55 PNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGI-DKEVRRMKKSIGK---------- 103
             P  R  +    R+C NL  A V+ G  +A  IR+ + +K +   K+  G           
Sbjct:    50 PTIRSLSRNFHRSCINLD-AVVVSGTKLANTIRANVAEKVINYNKEHFGDNNKSFENFRF 108

Query:   104 VPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSI 163
              P L ++ VG R DS  YV++K+KA     IKS + +  +  ++++++  +   N+D  +
Sbjct:   109 QPSLTILQVGSRPDSSAYVKSKLKAAASSNIKSKLIKLDESISQEDLVEVIERLNKDPKV 168

Query:   164 NGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELL 223
             +GILVQLPLP+H+DE  I ++V+ +KDVDGF   N+G L+ RG  P F PCTP G +EL+
Sbjct:   169 HGILVQLPLPKHIDESVITNSVATDKDVDGFDHYNVGQLSKRGGTPYFKPCTPNGIMELI 228

Query:   224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAA 283
               +G+ + GK AVVIGRS+IVG P + +L+    TV++ H  T+N  +I  +ADIV+AA 
Sbjct:   229 KTTGIPLRGKTAVVIGRSDIVGTPVATMLRNEDCTVTVCHRYTQNLPEIVRQADIVVAAV 288

Query:   284 GVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG 343
             G+A  V+  W+K GA+V+DVG   ++   DP+ + G RL+GDV YEE  + AS ITPVPG
Sbjct:   289 GIAEYVKADWVKDGAIVIDVG---INYKDDPTAKRGRRLVGDVDYEEVAKKASFITPVPG 345

Query:   344 GVGPMTVAMLLSNTLDSA 361
             GVGPMTVAML SN  D+A
Sbjct:   346 GVGPMTVAMLCSNVYDAA 363

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5AAF6 MIS1 "Putative uncharacterized protein MIS1" [Candida albicans SC5314 (taxid:237561)]

 Score = 669 (240.6 bits), Expect = 2.2e-67, Sum P(2) = 2.2e-67
 Identities = 137/318 (43%), Positives = 199/318 (62%)

Query:    55 PNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGI-DKEVRRMKKSIGK---------- 103
             P  R  +    R+C NL  A V+ G  +A  IR+ + +K +   K+  G           
Sbjct:    50 PTIRSLSRNFHRSCINLD-AVVVSGTKLANTIRANVAEKVINYNKEHFGDNNKSFENFRF 108

Query:   104 VPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSI 163
              P L ++ VG R DS  YV++K+KA     IKS + +  +  ++++++  +   N+D  +
Sbjct:   109 QPSLTILQVGSRPDSSAYVKSKLKAAASSNIKSKLIKLDESISQEDLVEVIERLNKDPKV 168

Query:   164 NGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELL 223
             +GILVQLPLP+H+DE  I ++V+ +KDVDGF   N+G L+ RG  P F PCTP G +EL+
Sbjct:   169 HGILVQLPLPKHIDESVITNSVATDKDVDGFDHYNVGQLSKRGGTPYFKPCTPNGIMELI 228

Query:   224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAA 283
               +G+ + GK AVVIGRS+IVG P + +L+    TV++ H  T+N  +I  +ADIV+AA 
Sbjct:   229 KTTGIPLRGKTAVVIGRSDIVGTPVATMLRNEDCTVTVCHRYTQNLPEIVRQADIVVAAV 288

Query:   284 GVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG 343
             G+A  V+  W+K GA+V+DVG   ++   DP+ + G RL+GDV YEE  + AS ITPVPG
Sbjct:   289 GIAEYVKADWVKDGAIVIDVG---INYKDDPTAKRGRRLVGDVDYEEVAKKASFITPVPG 345

Query:   344 GVGPMTVAMLLSNTLDSA 361
             GVGPMTVAML SN  D+A
Sbjct:   346 GVGPMTVAMLCSNVYDAA 363

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A0LE04	FOLD_MAGSM	3, ., 5, ., 4, ., 9	0.5273	0.7635	0.9859	yes	no
Q2RIB4	FOLD_MOOTA	3, ., 5, ., 4, ., 9	0.5068	0.7554	0.9928	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.4.9	0.914
3rd Layer	3.5.4	0.921
3rd Layer	1.5.1	0.921
4th Layer	1.5.1.5	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh2_kg.4__1936__AT2G38660.3	annotation not avaliable (350 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	fgenesh2_kg.1__4130__AT1G50480.1	annotation not avaliable (634 aa)	•	•				•	•		0.902
	fgenesh2_kg.4__1530__AT2G35040.1	annotation not avaliable (598 aa)	•			•		•	•		0.585
	fgenesh2_kg.1__1285__AT1G11860.2	annotation not avaliable (408 aa)	•					•	•		0.573
	fgenesh2_kg.8__52__AT5G47435.2	annotation not avaliable (323 aa)	•					•	•		0.473
	fgenesh2_kg.7__2574__AT4G17360.1	annotation not avaliable (328 aa)	•					•	•		0.457
	fgenesh2_kg.1__1041__AT1G09830.1	annotation not avaliable (530 aa)	•					•	•		0.426
	Al_scaffold_0008_2924	annotation not avaliable (469 aa)	•						•		0.405

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	368
PLN02897	345	PLN02897, PLN02897, tetrahydrofolate dehydrogenase	0.0
PLN02616	364	PLN02616, PLN02616, tetrahydrofolate dehydrogenase	1e-152
PLN02516	299	PLN02516, PLN02516, methylenetetrahydrofolate dehy	1e-140
COG0190	283	COG0190, FolD, 5,10-methylene-tetrahydrofolate deh	1e-123
PRK14190	284	PRK14190, PRK14190, bifunctional 5,10-methylene-te	1e-117
PRK10792	285	PRK10792, PRK10792, bifunctional 5,10-methylene-te	1e-112
PRK14188	296	PRK14188, PRK14188, bifunctional 5,10-methylene-te	1e-109
PRK14189	285	PRK14189, PRK14189, bifunctional 5,10-methylene-te	1e-105
PRK14191	285	PRK14191, PRK14191, bifunctional 5,10-methylene-te	1e-103
PRK14174	295	PRK14174, PRK14174, bifunctional 5,10-methylene-te	1e-103
PRK14186	297	PRK14186, PRK14186, bifunctional 5,10-methylene-te	1e-102
PRK14179	284	PRK14179, PRK14179, bifunctional 5,10-methylene-te	1e-102
PRK14185	293	PRK14185, PRK14185, bifunctional 5,10-methylene-te	3e-98
PRK14168	297	PRK14168, PRK14168, bifunctional 5,10-methylene-te	5e-96
PRK14170	284	PRK14170, PRK14170, bifunctional 5,10-methylene-te	2e-94
PRK14183	281	PRK14183, PRK14183, bifunctional 5,10-methylene-te	7e-93
PRK14193	284	PRK14193, PRK14193, bifunctional 5,10-methylene-te	9e-90
PRK14194	301	PRK14194, PRK14194, bifunctional 5,10-methylene-te	1e-89
PRK14176	287	PRK14176, PRK14176, bifunctional 5,10-methylene-te	2e-89
PRK14175	286	PRK14175, PRK14175, bifunctional 5,10-methylene-te	4e-89
PRK14167	297	PRK14167, PRK14167, bifunctional 5,10-methylene-te	1e-88
PRK14184	286	PRK14184, PRK14184, bifunctional 5,10-methylene-te	1e-88
PRK14166	282	PRK14166, PRK14166, bifunctional 5,10-methylene-te	3e-87
PRK14187	294	PRK14187, PRK14187, bifunctional 5,10-methylene-te	1e-86
cd01080	168	cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding	1e-82
pfam02882	160	pfam02882, THF_DHG_CYH_C, Tetrahydrofolate dehydro	2e-82
PRK14172	278	PRK14172, PRK14172, bifunctional 5,10-methylene-te	8e-81
PRK14182	282	PRK14182, PRK14182, bifunctional 5,10-methylene-te	2e-80
PRK14178	279	PRK14178, PRK14178, bifunctional 5,10-methylene-te	1e-79
PRK14171	288	PRK14171, PRK14171, bifunctional 5,10-methylene-te	4e-78
PRK14173	287	PRK14173, PRK14173, bifunctional 5,10-methylene-te	2e-76
PRK14192	283	PRK14192, PRK14192, bifunctional 5,10-methylene-te	3e-76
PRK14181	287	PRK14181, PRK14181, bifunctional 5,10-methylene-te	3e-74
PRK14169	282	PRK14169, PRK14169, bifunctional 5,10-methylene-te	9e-74
PRK14180	282	PRK14180, PRK14180, bifunctional 5,10-methylene-te	2e-73
PRK14177	284	PRK14177, PRK14177, bifunctional 5,10-methylene-te	4e-72
pfam00763	117	pfam00763, THF_DHG_CYH, Tetrahydrofolate dehydroge	4e-48
cd05212	140	cd05212, NAD_bind_m-THF_DH_Cyclohyd_like, NAD(P) b	2e-27
cd01079	197	cd01079, NAD_bind_m-THF_DH, NAD binding domain of	8e-13

>gnl|CDD|178485 PLN02897, PLN02897, tetrahydrofolate dehydrogenase/cyclohydrolase, putative

 Score =  564 bits (1455), Expect = 0.0
 Identities = 238/330 (72%), Positives = 278/330 (84%), Gaps = 7/330 (2%)

Query: 36  RIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVR 95
            I++SPPL++LDLPE W P +    +P P  +    Q   VIDG  IAEEIR+ I  EVR
Sbjct: 22  SILVSPPLVSLDLPENWIPYS----DPPPPVSFETEQKTVVIDGNVIAEEIRTKIASEVR 77

Query: 96  RMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALS 155
           +MKK++GKVPGLAV+LVG++RDSQTYVRNKIKACEE GIKS++ E  + CTE ++L+AL 
Sbjct: 78  KMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALR 137

Query: 156 NYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCT 215
            +N+D+SI+GILVQLPLPQHLDE KIL+ V LEKDVDGFHPLN+GNLAMRGREPLF+ CT
Sbjct: 138 KFNEDTSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCT 197

Query: 216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSE 275
           PKGC+ELLIRSGVEI GKNAVVIGRSNIVGLP SLLLQRH ATVS VHA TK+PEQIT +
Sbjct: 198 PKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRK 257

Query: 276 ADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLA 335
           ADIVIAAAG+ NLVRGSWLKPGAVV+DVGT PV+   D SCE+GYRL+GDVCYEEA+ +A
Sbjct: 258 ADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVE---DSSCEFGYRLVGDVCYEEALGVA 314

Query: 336 SVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
           S ITPVPGGVGPMT+ MLL NTLD+AKR +
Sbjct: 315 SAITPVPGGVGPMTITMLLCNTLDAAKRIF 344

Length = 345

>gnl|CDD|215332 PLN02616, PLN02616, tetrahydrofolate dehydrogenase/cyclohydrolase, putative

 Score =  432 bits (1111), Expect = e-152
 Identities = 205/294 (69%), Positives = 238/294 (80%), Gaps = 3/294 (1%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           A VIDGK++A++IR  I  EV RMK+SIG VPGLAVILVG+R+DS TYVRNK KAC+ VG
Sbjct: 73  AKVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVG 132

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
           I S      +  TE EVL  +S +N D S++GILVQLPLP H+DE  IL+AVS+EKDVDG
Sbjct: 133 INSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDG 192

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           FHPLNIG LAMRGREPLF+PCTPKGCIELL R  VEI GK AVVIGRSNIVG+P +LLLQ
Sbjct: 193 FHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQ 252

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
           R  ATVSIVH+ TKNPE+IT EADI+I+A G  N+VRGSW+KPGAVV+DVG  PV+   D
Sbjct: 253 REDATVSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINPVE---D 309

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367
            S   GYRL+GDVCYEEA ++AS +TPVPGGVGPMT+AMLLSNTL SAKR + F
Sbjct: 310 ASSPRGYRLVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTLTSAKRIHNF 363

Length = 364

>gnl|CDD|178131 PLN02516, PLN02516, methylenetetrahydrofolate dehydrogenase (NADP+)

 Score =  400 bits (1030), Expect = e-140
 Identities = 180/294 (61%), Positives = 227/294 (77%), Gaps = 3/294 (1%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
            A +IDGK+IA+ IRS I +EV ++ +  GKVPGLAV++VG R+DSQTYV  K KAC EV
Sbjct: 8   VAQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEV 67

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           GIKS   +  +  +E E+++ +   N +  ++GILVQLPLP+H++E KIL+ +SLEKDVD
Sbjct: 68  GIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVD 127

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHPLNIG LAM+GREPLF+PCTPKGC+ELL RSG+ I GK AVV+GRSNIVGLP SLLL
Sbjct: 128 GFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLL 187

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
            +  ATV++VH+ T +PE I  EADIVIAAAG A +++G W+KPGA V+DVGT  V    
Sbjct: 188 LKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVS--- 244

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
           DPS + GYRL+GDV + E  ++A  ITPVPGGVGPMTVAMLL NT+D AKR + 
Sbjct: 245 DPSKKSGYRLVGDVDFAEVSKVAGWITPVPGGVGPMTVAMLLKNTVDGAKRVFA 298

Length = 299

>gnl|CDD|223268 COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

 Score =  357 bits (918), Expect = e-123
 Identities = 147/290 (50%), Positives = 195/290 (67%), Gaps = 11/290 (3%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
            +IDGK++AE+IR  + ++V  +K   G  PGLAVILVG+   SQ YVR+K KA EE+GI
Sbjct: 1   MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGI 60

Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
            S + +  +  TE+E+L  +   N D  ++GILVQLPLP+HLDE K+L A+  EKDVDGF
Sbjct: 61  ASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGF 120

Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR 254
           HP N+G LA    EP F+PCTP G + LL   G+++ GKN VV+GRSNIVG P +LLL  
Sbjct: 121 HPYNLGKLA--QGEPGFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLN 178

Query: 255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
            +ATV++ H+ TK+   IT  ADIV+ A G  + ++   +KPGAVV+DVG   V+     
Sbjct: 179 ANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVN----- 233

Query: 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 364
                 +L+GDV ++     AS ITPVPGGVGPMTVAMLL NTL +A+R 
Sbjct: 234 ----DGKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQ 279

Length = 283

>gnl|CDD|184560 PRK14190, PRK14190, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  340 bits (874), Expect = e-117
 Identities = 144/294 (48%), Positives = 193/294 (65%), Gaps = 12/294 (4%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
            A +IDGK +A+E R  + +EV ++K+  G VPGLAVILVG+   S +YVR K KA E+V
Sbjct: 2   MAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKV 60

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           GI S + EF    TE+E+L  +   N D  INGILVQLPLP+H+DE  +++ +S EKDVD
Sbjct: 61  GIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVD 120

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHP+N+G + +   +  F+PCTP G +ELL    ++I GK+ VV+GRSNIVG P   LL
Sbjct: 121 GFHPINVGRMML--GQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLL 178

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
              +ATV+  H+ TKN  ++T +ADI+I A G   L+    +K GAVV+DVG   +    
Sbjct: 179 LNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRL---- 234

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
               E G  L GDV ++     AS ITPVPGGVGPMT+ ML+ NT++ AKRA G
Sbjct: 235 ----ENGK-LCGDVDFDNVKEKASYITPVPGGVGPMTITMLMHNTVELAKRAGG 283

Length = 284

>gnl|CDD|236760 PRK10792, PRK10792, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  327 bits (840), Expect = e-112
 Identities = 137/289 (47%), Positives = 183/289 (63%), Gaps = 11/289 (3%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
           TA +IDGK+IA+++RS + ++V+    +  + PGLAV+LVG    SQ YV +K KACEEV
Sbjct: 2   TAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEV 61

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G  S   +  +  +E E+L  +   N D +I+GILVQLPLP H+D  K+L+ +  +KDVD
Sbjct: 62  GFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVD 121

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHP N+G LA   R PL  PCTP+G + LL R G++  G NAVV+G SNIVG P SL L
Sbjct: 122 GFHPYNVGRLAQ--RIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLEL 179

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
                TV++ H  TKN       AD+++ A G    + G W+KPGA+V+DVG   ++   
Sbjct: 180 LLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLEDG- 238

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361
                   +L+GDV +E A   AS ITPVPGGVGPMTVA LL NTL + 
Sbjct: 239 --------KLVGDVEFETAAERASWITPVPGGVGPMTVATLLENTLQAC 279

Length = 285

>gnl|CDD|184558 PRK14188, PRK14188, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  322 bits (827), Expect = e-109
 Identities = 142/297 (47%), Positives = 194/297 (65%), Gaps = 10/297 (3%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
            AT+IDGK+ A ++R+ +  EV R+K + G  PGLAV+LVGE   SQ YVR+K K  +E 
Sbjct: 1   MATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEA 60

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G+ S   +     ++ E+L  ++  N D +I+GILVQLPLP+HLD   ++ A+  EKDVD
Sbjct: 61  GMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVD 120

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           G H +N G LA    E   +PCTP GC+ LL R   ++ G NAVVIGRSN+VG P + LL
Sbjct: 121 GLHVVNAGRLA--TGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLL 178

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
              +ATV+I H+ T++   +   ADI++AA G   +V+G W+KPGA V+DVG     ++ 
Sbjct: 179 LAANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVG-----INR 233

Query: 313 DPSCEYGY---RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
            P+ E G    RL+GDV + EA  +A  ITPVPGGVGPMT+A LL+NTL +A RA G
Sbjct: 234 IPAPEKGEGKTRLVGDVAFAEAAEVAGAITPVPGGVGPMTIACLLANTLTAACRAAG 290

Length = 296

>gnl|CDD|184559 PRK14189, PRK14189, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  310 bits (795), Expect = e-105
 Identities = 135/294 (45%), Positives = 190/294 (64%), Gaps = 12/294 (4%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
           TA +IDG ++++++R+   +    +    G  PGLAVILVG+   SQ YVRNK+KACE+ 
Sbjct: 2   TAQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDN 60

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G  S+   +    +E E+L  +   N+D  I+GILVQLPLP+H+D  K+++A++ EKDVD
Sbjct: 61  GFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVD 120

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFH  N G L M G +PLF PCTP G +++L   G+ + G +AVVIGRSNIVG P ++LL
Sbjct: 121 GFHVANAGAL-MTG-QPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLL 178

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
            +  ATV+I H+ T++    T +ADIV+AA G  N++    +KPGA V+DVG    D   
Sbjct: 179 LQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDDAG- 237

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
                   +L GDV +     +A  ITPVPGGVGPMT+ MLL NT+++A+RA  
Sbjct: 238 --------KLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLVNTIEAAERAAA 283

Length = 285

>gnl|CDD|172679 PRK14191, PRK14191, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  306 bits (785), Expect = e-103
 Identities = 130/288 (45%), Positives = 181/288 (62%), Gaps = 11/288 (3%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
            ++DGK+++ +I   +  +++ +    GK P LAVILVG+   SQTYV  KIKACE VG+
Sbjct: 2   VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGM 61

Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
            S +    +  TE E+L+ + + N D +I+GILVQLPLP+H+D   +L+A+   KDVDGF
Sbjct: 62  DSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGF 121

Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR 254
           HPLNIG L     +  F+P TP G + LL    +EI GK+ V+IG SNIVG P ++L+  
Sbjct: 122 HPLNIGKLCS-QLDG-FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLN 179

Query: 255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
             A+VS+ H LTK+    T  ADIV    G  +L++ S +K GAVV+D+G   ++     
Sbjct: 180 AGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLNDG--- 236

Query: 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                 RL+GDV +E     AS ITPVPGGVGPMT+  LL NTL +A+
Sbjct: 237 ------RLVGDVDFENVAPKASFITPVPGGVGPMTIVSLLENTLIAAE 278

Length = 285

>gnl|CDD|172662 PRK14174, PRK14174, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  305 bits (783), Expect = e-103
 Identities = 142/296 (47%), Positives = 190/296 (64%), Gaps = 7/296 (2%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
            +IDGK ++ ++++ +   V   +   GKVPGL VI+VGE   SQ YVRNK K+C+E+G+
Sbjct: 2   LIIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGM 61

Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
            S V E     TE+ +L  + + N D  ++GILVQ PLP+ +DE  +  A+   KDVDGF
Sbjct: 62  NSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGF 121

Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQ 253
           HP N+G L M   +  F+ CTP G +ELL R  +E  GK+ VV+GRSNIVG P  +L+LQ
Sbjct: 122 HPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQ 181

Query: 254 RHHA---TVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310
           +      TV+I H+ TK+    T +ADI+IAA G A  +    +KPGAVV+DVG   ++ 
Sbjct: 182 KLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIE- 240

Query: 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
             DPS + GYRL+GDV YE     AS ITPVPGGVGPMT+AMLL NTL S +R   
Sbjct: 241 --DPSTKSGYRLVGDVDYEGVSAKASAITPVPGGVGPMTIAMLLKNTLQSFERVNN 294

Length = 295

>gnl|CDD|237636 PRK14186, PRK14186, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  304 bits (780), Expect = e-102
 Identities = 137/294 (46%), Positives = 187/294 (63%), Gaps = 7/294 (2%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
            A ++DGK++A EI   +  ++       G+ PGLAV+ VG+   S  YVRNK KAC  V
Sbjct: 1   MALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARV 60

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           GI S         ++ EV   ++  NQD  ++GIL+QLPLP+HLDE  +L A+  +KD D
Sbjct: 61  GIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDAD 120

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           G HPLN+G L ++G EP    CTP G + LL    ++I GK AVV+GRS +VG P +L+L
Sbjct: 121 GLHPLNLGRL-VKG-EPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALML 178

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
              +ATV+I H+ T++   IT EADI++AAAG  NL+    +KPGAVV+DVG     +  
Sbjct: 179 LAANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVG-----IHR 233

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
            PS +   RL GDV +EE   +A+ ITPVPGGVGPMTV MLL NT+ S ++ +G
Sbjct: 234 LPSSDGKTRLCGDVDFEEVEPVAAAITPVPGGVGPMTVTMLLVNTVLSWQKRHG 287

Length = 297

>gnl|CDD|237634 PRK14179, PRK14179, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  302 bits (774), Expect = e-102
 Identities = 135/290 (46%), Positives = 198/290 (68%), Gaps = 11/290 (3%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
             +IDGK++A+++++ + ++V ++K+  G VPGL VILVG+   SQ YVRNK ++    G
Sbjct: 2   TEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAG 61

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
            KS V    +  +++E+L+ +  YNQD + +GILVQLPLP+H++E KIL A+  +KDVDG
Sbjct: 62  FKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDG 121

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           FHP+N G+L   GR P+ IPCTP G +E+     VE+ GK+AVVIGRSNIVG P + LL 
Sbjct: 122 FHPMNTGHL-WSGR-PVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLL 179

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
             +ATV++ H+ T+N  ++  +ADI++ A G  + V   ++K GAVV+DVG     ++ D
Sbjct: 180 DKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVG-----MNRD 234

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
              E G +L+GDV ++E   +AS ITPVPGGVGPMT+ ML+  T  +A R
Sbjct: 235 ---ENG-KLIGDVDFDEVAEVASYITPVPGGVGPMTITMLMEQTYQAALR 280

Length = 284

>gnl|CDD|184556 PRK14185, PRK14185, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  292 bits (750), Expect = 3e-98
 Identities = 134/295 (45%), Positives = 189/295 (64%), Gaps = 9/295 (3%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
            +IDGK+I+ +I+  I  EV  +    GK P LA ILVG    S+TYV NK+KACEE G 
Sbjct: 2   QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGF 61

Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
           KS +  +    TE+E+L  +   NQD  ++G +VQLPLP+H+ E K+++A+   KDVDGF
Sbjct: 62  KSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121

Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQ 253
           HP+N+G +++    P F+  TP G +ELL R  +E  GK  VV+GRSNIVG P   L++Q
Sbjct: 122 HPINVGRMSI--GLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQ 179

Query: 254 RHH---ATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310
           + +    TV++ H+ +KN ++   EADI+IAA G    V+   +K GAVV+DVGT  V  
Sbjct: 180 KAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVP- 238

Query: 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
             D + + G++L GDV ++E     S ITPVPGGVGPMT+  L+ NTL + K+A 
Sbjct: 239 --DATRKSGFKLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMKNTLLAGKKAI 291

Length = 293

>gnl|CDD|237633 PRK14168, PRK14168, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  287 bits (736), Expect = 5e-96
 Identities = 145/299 (48%), Positives = 188/299 (62%), Gaps = 7/299 (2%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
           +A +I G  I EEI   I  EV  +K+  GKVPGL  ILVGE   S +YV  KIK    +
Sbjct: 2   SAKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRL 61

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G   I    +   TE+E+L  +  YN D SI+GILVQLPLP+H++E K+L+A+  +KDVD
Sbjct: 62  GFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVD 121

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHP+N+G L + G E  F+PCTP G  E+L+RSGVE  G   VV+GRSNIVG P + ++
Sbjct: 122 GFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMM 181

Query: 253 QRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPV 308
            +     +ATV+IVH  +KN  +    ADI+I AAGV NLV+  W+KPGA V+DVG   V
Sbjct: 182 TQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNRV 241

Query: 309 DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367
             +          L GDV ++    +A  ITPVPGGVGPMT+AML+ NTL SAK     
Sbjct: 242 GTNESTGKAI---LSGDVDFDAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLSL 297

Length = 297

>gnl|CDD|172658 PRK14170, PRK14170, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  283 bits (724), Expect = 2e-94
 Identities = 144/290 (49%), Positives = 206/290 (71%), Gaps = 12/290 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK +A+EI+  + +EV  + K  GK PGLAV+LVG+ + S+TYVRNK K  EE G+K
Sbjct: 4   IIDGKKLAKEIQEKVTREVAELVK-EGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S++ E  +  TE+++L+ +   N+D +I+GILVQLPLP+H+ E K++D +S +KDVDGFH
Sbjct: 63  SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P+N+GNL + G++  F+PCTP G IEL+  +G +I GK AVVIGRSNIVG P + LL   
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE 180

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV+I H+ TK+  Q+  EADI++ A G+A  V+  ++KPGA+V+DVG           
Sbjct: 181 NATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGM---------D 231

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
            +   +L GDV +++ +  A  ITPVPGGVGPMT+ MLL+NTL +AKR +
Sbjct: 232 RDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281

Length = 284

>gnl|CDD|184555 PRK14183, PRK14183, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  279 bits (714), Expect = 7e-93
 Identities = 135/288 (46%), Positives = 187/288 (64%), Gaps = 11/288 (3%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
            ++DGK+++++I+  + KEV  +K     VPGLAVILVG+   S TYV+ K KAC+ VGI
Sbjct: 2   QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGI 61

Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
            SI  E     ++ E+L  ++  N + +I+GILVQLPLP+H+D  KIL+A+  +KDVDGF
Sbjct: 62  YSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGF 121

Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR 254
           HP N+G L + G +  F+PCTP G +ELL    +++ GK+  V+G SNIVG P + LL  
Sbjct: 122 HPYNVGRL-VTGLDG-FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLN 179

Query: 255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
            +ATV I H  TK+ +  T +ADIVI   G  NL+    +K GA+V+D+G    +     
Sbjct: 180 ANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTEDG--- 236

Query: 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                 RL+GDV +E   +  S ITPVPGGVGPMT+AMLLSNTL +AK
Sbjct: 237 ------RLVGDVDFENVAKKCSYITPVPGGVGPMTIAMLLSNTLKAAK 278

Length = 281

>gnl|CDD|237637 PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  271 bits (694), Expect = 9e-90
 Identities = 130/300 (43%), Positives = 179/300 (59%), Gaps = 21/300 (7%)

Query: 72  QTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEE 131
            TA ++DGK+ A+EI++ + + V  +K+  G  PGL  +LVG+   SQ YVR K + C E
Sbjct: 1   MTAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAE 59

Query: 132 VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV 191
           VGI SI  +     T++E+   +   N D +  G +VQLPLP+HLDE  +L+ +   KD 
Sbjct: 60  VGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDA 119

Query: 192 DGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLL 251
           DG HP N+G L +    PL  PCTP+G + LL R  VE+ G + VVIGR   VG P  LL
Sbjct: 120 DGLHPTNLGRLVLNEPAPL--PCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLL 177

Query: 252 LQRHH--ATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD 309
           L R    ATV++ H  T++    T  ADI++AAAGVA+LV    +KPGA VLDVG   V 
Sbjct: 178 LTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVG---VS 234

Query: 310 VSVDPSCEYGYRLMGDV---CYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
            + D       +L+GDV    +E    +A  ++P PGGVGPMT A LL+N ++ A+R  G
Sbjct: 235 RAGD------GKLVGDVHPDVWE----VAGAVSPNPGGVGPMTRAFLLTNVVERAERRAG 284

Length = 284

>gnl|CDD|172682 PRK14194, PRK14194, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  271 bits (694), Expect = 1e-89
 Identities = 136/293 (46%), Positives = 195/293 (66%), Gaps = 11/293 (3%)

Query: 71  LQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACE 130
           L +A +IDGK+ A  + + + ++VR +K + G  P LAVILVG    SQ YVRNKI   E
Sbjct: 1   LMSAKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAE 59

Query: 131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKD 190
           E GI+S+        ++  +L  ++  N D S+NGIL+QLPLP H+DE ++L A++  KD
Sbjct: 60  EAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKD 119

Query: 191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSL 250
           VDGFH  N+G L+ +GR+ L  PCTP GC+ LL  +  ++ GK+AVVIGRSNIVG P + 
Sbjct: 120 VDGFHSENVGGLS-QGRDVL-TPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAA 177

Query: 251 LLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310
           LL + H +V++VH+ + + + +  +ADIV+AA G   L+   WLKPGAVV+DVG   +D 
Sbjct: 178 LLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRID- 236

Query: 311 SVDPSCEYGY-RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                 + G  RL+GDV ++ A+ + S ITPVPGGVGPMT+A L+ NT+ +A+
Sbjct: 237 ------DDGRSRLVGDVDFDSALPVVSAITPVPGGVGPMTIAFLMKNTVTAAR 283

Length = 301

>gnl|CDD|184553 PRK14176, PRK14176, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  270 bits (692), Expect = 2e-89
 Identities = 125/290 (43%), Positives = 185/290 (63%), Gaps = 12/290 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK++A++I + +   V R+K + G  PGLA ILVG+   S+ YVR K KACE VGI+
Sbjct: 10  IIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIR 69

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           +         T++E+L  + + N+   ++GIL+QLPLP+HLD  + ++A+   KD DGFH
Sbjct: 70  AEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFH 129

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P N+G L M G E   +PCTP G I  L   GV+I GKNAV++G SN+VG P + +L   
Sbjct: 130 PYNMGKL-MIGDEG-LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNR 187

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATVS+ H  T + ++ T +ADI++ A GV +L++   +K GAV+ DVG    +  V   
Sbjct: 188 NATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITKEEDKV--- 244

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
                   GDV +E  ++ AS+ITPVPGGVGP+T+AML+ + L  A+++ 
Sbjct: 245 -------YGDVDFENVIKKASLITPVPGGVGPLTIAMLMKHVLMCAEKSL 287

Length = 287

>gnl|CDD|184552 PRK14175, PRK14175, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  269 bits (689), Expect = 4e-89
 Identities = 136/295 (46%), Positives = 196/295 (66%), Gaps = 12/295 (4%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           A ++DGK IA++ R G+  +V  +K+  G  P L+VILVG    SQ+YVR+K KA E++G
Sbjct: 3   AKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIG 61

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
           + S +    +  TE+EVLN L+  N D S++GILVQ+PLP+ + E KIL+A++ EKDVDG
Sbjct: 62  MISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDG 121

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           FHP+NIG L +   E  F+PCTP G +E+L  + +++ GKNAVVIGRS+IVG P S LL 
Sbjct: 122 FHPINIGKLYI--DEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLL 179

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
           + +A+V+I+H+ +K+      +AD++++A G   LV    +K GAV++DVG  P      
Sbjct: 180 QKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPD----- 234

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 368
              E G +L GDV Y+    +A  ITPVPGGVGP+T+ M+L+NTL + K   G  
Sbjct: 235 ---ENG-KLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGID 285

Length = 286

>gnl|CDD|184549 PRK14167, PRK14167, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  268 bits (687), Expect = 1e-88
 Identities = 130/297 (43%), Positives = 181/297 (60%), Gaps = 11/297 (3%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
             +IDG ++A +IR  +   +  ++ + G  PGLA +L+ +   S+TYV  K + CEEVG
Sbjct: 2   TEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVG 60

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
           I++I  E       +E+ + +   N D  ++GILVQ+P+P H+D+ ++L  +   KDVDG
Sbjct: 61  IEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDG 120

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLL 252
           FHP N+G L     +  F PCTP G  +LL  +GV+  G + VV+GRS+IVG P  +LL+
Sbjct: 121 FHPENVGRLV--AGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLI 178

Query: 253 QRHH---ATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD 309
           Q+     ATV++ H+ T +    T  ADIV+AAAGV  L+ GS L  GA V+DVG     
Sbjct: 179 QKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGIN--- 235

Query: 310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
             VD   E GY L+GDV +E A   AS ITPVPGGVGPMT AMLL NT+ +A    G
Sbjct: 236 -RVDADTEKGYELVGDVEFESAKEKASAITPVPGGVGPMTRAMLLYNTVKAASLQEG 291

Length = 297

>gnl|CDD|237635 PRK14184, PRK14184, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  268 bits (686), Expect = 1e-88
 Identities = 131/291 (45%), Positives = 172/291 (59%), Gaps = 16/291 (5%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           ++DGK+ A  IR  +  EV  +    G+ PGLAVILVGE   SQ YVRNK +ACE+ GI 
Sbjct: 3   LLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIV 62

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S         T++E+ + ++  N    I+GIL+QLPLP+ LD  + L+ +   KDVDGFH
Sbjct: 63  SEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFH 122

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P N+G LA+    P F PCTP G + LL R G+   GK AVV+GRSNIVG P +L+L   
Sbjct: 123 PENMGRLAL--GLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAP 180

Query: 256 ----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311
               +ATV++ H+ T +  +   EAD +  A G    V    +KPGAVV+DVG    D  
Sbjct: 181 GKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTDDG 240

Query: 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                     L+GD  +E    +AS ITPVPGGVGPMT+A LL NT+ S K
Sbjct: 241 ----------LVGDCDFEGLSDVASAITPVPGGVGPMTIAQLLVNTVQSWK 281

Length = 286

>gnl|CDD|172654 PRK14166, PRK14166, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  264 bits (676), Expect = 3e-87
 Identities = 133/288 (46%), Positives = 194/288 (67%), Gaps = 11/288 (3%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
           T++DGK+++ +I+  + ++ + +K S G    LAVILVG+   SQTYV++K KACEE GI
Sbjct: 2   TLLDGKALSAKIKEELKEKNQFLK-SKGIESCLAVILVGDNPASQTYVKSKAKACEECGI 60

Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
           KS+V    +  T++E+L  ++  N D S++GILVQLPLP H+ +  IL+++   KDVDGF
Sbjct: 61  KSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGF 120

Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR 254
           HP+N+G L + G E  F+PCTP G ++LL    +++ GK+AV+IG SNIVG P + +L  
Sbjct: 121 HPINVGYLNL-GLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLN 179

Query: 255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
             ATVS+ H  TK+    T +AD++I AAG  NL+R   +K G +V+DVG   ++     
Sbjct: 180 AGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLESG--- 236

Query: 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                 +++GDV +EE  + +S ITPVPGGVGPMT+AMLL NT+ SAK
Sbjct: 237 ------KIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAK 278

Length = 282

>gnl|CDD|172675 PRK14187, PRK14187, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  263 bits (674), Expect = 1e-86
 Identities = 121/288 (42%), Positives = 176/288 (61%), Gaps = 6/288 (2%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
             +IDGK IA +I   +   +  +K+     P L VILVG+   SQ YVRNK +  E +G
Sbjct: 2   TNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLG 61

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
           ++S         +E  ++  ++  N D S++GILVQLP+P H+D+  I++ +  EKDVDG
Sbjct: 62  LRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDG 121

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           FH  N+G L    ++   IPCTPKGC+ L+      + G +AVVIGRSNIVG P + LL 
Sbjct: 122 FHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLL 181

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
             + TV+ VH+ T++     S+ADI++AA G+ N V+ SW+K GA+V+DVG   ++    
Sbjct: 182 GENCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIEE--- 238

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361
                  + +GDV + E  + AS ITPVPGGVGPMT+A L+ NT+ +A
Sbjct: 239 ---GGVKKFVGDVDFAEVKKKASAITPVPGGVGPMTIAFLMVNTVIAA 283

Length = 294

>gnl|CDD|133448 cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

 Score =  249 bits (637), Expect = 1e-82
 Identities = 98/175 (56%), Positives = 124/175 (70%), Gaps = 8/175 (4%)

Query: 188 EKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP 247
           EKDVDG HP+N+G LA+    P FIPCTP G +ELL R G+++ GK  VV+GRSNIVG P
Sbjct: 2   EKDVDGLHPVNLGRLALGR--PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKP 59

Query: 248 TSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCP 307
            + LL   +ATV++ H+ TKN ++ T +ADIVI A G   LV+G  +KPGAVV+DVG   
Sbjct: 60  LAALLLNRNATVTVCHSKTKNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR 119

Query: 308 VDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
           V    D S   G +L+GDV +E A   AS ITPVPGGVGPMTVAML+ NT+++AK
Sbjct: 120 VP---DKS---GGKLVGDVDFESAKEKASAITPVPGGVGPMTVAMLMKNTVEAAK 168

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well as bifunctional m-THF m-THF DHm-THF DHDH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains the bifunctional DH/cyclohydrolase. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. Length = 168

>gnl|CDD|217267 pfam02882, THF_DHG_CYH_C, Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

 Score =  247 bits (633), Expect = 2e-82
 Identities = 91/170 (53%), Positives = 119/170 (70%), Gaps = 11/170 (6%)

Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR 254
           HP+N+G L +   EP F+PCTP+G +ELL R G+++ GKN VVIGRSNIVG P +LLL  
Sbjct: 1   HPINLGRLVLG--EPGFVPCTPRGIMELLKRYGIDLAGKNVVVIGRSNIVGKPLALLLLN 58

Query: 255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
            +ATV++ H+ TK+  +IT EADIV+ A G   L++  W+KPGAVV+DVG   V+     
Sbjct: 59  ANATVTVCHSKTKDLAEITREADIVVVAVGKPGLIKADWVKPGAVVIDVGINRVE----- 113

Query: 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 364
                 +L+GDV +E     AS ITPVPGGVGPMTVAMLL NT+++AKR 
Sbjct: 114 ----NGKLVGDVDFENVKEKASAITPVPGGVGPMTVAMLLQNTVEAAKRQ 159

Length = 160

>gnl|CDD|172660 PRK14172, PRK14172, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  248 bits (634), Expect = 8e-81
 Identities = 105/287 (36%), Positives = 170/287 (59%), Gaps = 12/287 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +I+GK +A +I+  I   V   K++   +P +A ILVG    S  Y+ N+ K    +GI 
Sbjct: 4   IINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGID 63

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
               +  +  +E++++N +   N+D++++GI++QLPLP+HLDE KI + +   KD+D   
Sbjct: 64  FKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLT 123

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
            +++G       E  F+PCTP   I L+    ++I GK  VVIGRSNIVG P + LL   
Sbjct: 124 FISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNE 181

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV+I H+ TKN +++  +ADI++ A G    +   ++K GA+V+DVGT  V+      
Sbjct: 182 NATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVN------ 235

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                ++ GDV +++ +  AS ITPVPGGVG +T  +L+ N  ++ K
Sbjct: 236 ----GKITGDVNFDKVIDKASYITPVPGGVGSLTTTLLIKNVCEALK 278

Length = 278

>gnl|CDD|172670 PRK14182, PRK14182, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  247 bits (631), Expect = 2e-80
 Identities = 134/288 (46%), Positives = 182/288 (63%), Gaps = 11/288 (3%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK IA +++  +  EVR +    G   GL V+ VG+   S  YVR K K CEEVGI 
Sbjct: 3   LIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGIT 61

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S+        T+ E+L  ++  N D +++GILVQLPLP+H+DE  +LDA+S  KD DGFH
Sbjct: 62  SVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFH 121

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P N+G L++ G   +  PCTP G + +L  + V+  GK A+V+GRSNIVG P +++L   
Sbjct: 122 PFNVGALSI-GIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLER 180

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           HATV+I H+ T +       ADI++AA G A LV+G+W+K GAVV+DVG   +       
Sbjct: 181 HATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLADG---- 236

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                +L+GDV +  A   AS ITPVPGGVGPMT AMLL NT++ AKR
Sbjct: 237 -----KLVGDVEFAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKR 279

Length = 282

>gnl|CDD|172666 PRK14178, PRK14178, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  245 bits (626), Expect = 1e-79
 Identities = 129/291 (44%), Positives = 175/291 (60%), Gaps = 22/291 (7%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSI---GKVPGLAVILVGERRDSQTYVRNKIKACEE 131
            ++DGK+++E       K +  +K+ I   G  P LA ++VG+   SQ YVR K +ACE 
Sbjct: 1   MILDGKAVSE-------KRLELLKEEIIESGLYPRLATVIVGDDPASQMYVRMKHRACER 53

Query: 132 VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV 191
           VGI S+  E     T   VL  +   N+D  INGILVQLPLP+ +D  +++ A+  EKDV
Sbjct: 54  VGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDV 113

Query: 192 DGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLL 251
           DGFHPLN+G L + G  P F PCTP G + LL    + I GK AVV+GRS  VG P + L
Sbjct: 114 DGFHPLNLGRL-VSGL-PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAAL 171

Query: 252 LQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311
           L    ATV+I H+ T+N +    +ADI+++AAG A  +    +KPGA V+DVG   V+  
Sbjct: 172 LLNADATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVN-- 229

Query: 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                    +L GDV ++    +A  ITPVPGGVGPMT+A L+ NT D+AK
Sbjct: 230 --------GKLCGDVDFDAVKEIAGAITPVPGGVGPMTIATLMENTFDAAK 272

Length = 279

>gnl|CDD|172659 PRK14171, PRK14171, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  241 bits (616), Expect = 4e-78
 Identities = 119/290 (41%), Positives = 179/290 (61%), Gaps = 10/290 (3%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGK++A EI + +  E++ +K      P LA++LVG+   S  YV+NKIK   ++GI 
Sbjct: 4   IIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGID 63

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           +++   +     +++++ ++  N D+ I+GI+VQLPLP  +D+ KIL AVS  KD+DGFH
Sbjct: 64  TLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFH 123

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           PLN+G L   G    FIPCT  GC+ ++ +    + GKN V+IGRSNIVG P S LL + 
Sbjct: 124 PLNVGYL-HSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKE 182

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           + +V+I H+ T N   ITS+ADIV+AA G    +   +  P ++V+DVG   +       
Sbjct: 183 NCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRIS------ 236

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
              G +++GDV +E        ITPVPGG+GPMT+A LL NT+ + K + 
Sbjct: 237 ---GNKIIGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVKAFKDSL 283

Length = 288

>gnl|CDD|184551 PRK14173, PRK14173, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  237 bits (605), Expect = 2e-76
 Identities = 123/294 (41%), Positives = 176/294 (59%), Gaps = 12/294 (4%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
            A  + G   AE + +    E+R     +  VP L V+ +GE   S +YVR K +  + +
Sbjct: 2   AARELSGPPAAEAVYA----ELRARLAKLPFVPHLRVVRLGEDPASVSYVRLKDRQAKAL 57

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G++S V    +  +++E+L  ++  N D  ++GILVQLPLP H+D  ++L+A+   KDVD
Sbjct: 58  GLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVD 117

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHPLN+G L M G E L  PCTP G + LL   G+ + GK  VV+GRSNIVG P + LL
Sbjct: 118 GFHPLNVGRLWM-GGEALE-PCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALL 175

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
            R  ATV++ H+ T++   +T  AD+++ A G  +L+    ++PGAVV+DVG   V    
Sbjct: 176 LREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRV---- 231

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
                    L GDV  E A  +A  +TPVPGGVGPMTVAML++NT+ +A R  G
Sbjct: 232 -GGNGGRDILTGDVHPEVA-EVAGALTPVPGGVGPMTVAMLMANTVIAALRRRG 283

Length = 287

>gnl|CDD|184561 PRK14192, PRK14192, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  236 bits (604), Expect = 3e-76
 Identities = 115/294 (39%), Positives = 172/294 (58%), Gaps = 12/294 (4%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
            A V+DGK++A++I   +   V  +K   G+ P LA ILVG+   S TYVR K  AC  V
Sbjct: 2   MALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRV 61

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G+ S+  E     T +++L  +   N +  ++GIL+Q P+P  +DE    DA+SL KDVD
Sbjct: 62  GMDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVD 121

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           G   L  G +AM   E  +   TP G + LL    +E+ GK+AVV+GRS I+G P +++L
Sbjct: 122 GVTCLGFGRMAM--GEAAYGSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMML 179

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
              +ATV+I H+ T+N  ++  +ADI++ A G   L++  W+K GAVV+D G  P D   
Sbjct: 180 LNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRDGGG 239

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
                     +GD+  +    +AS  TPVPGGVGPMT+  L+  T+++A++A G
Sbjct: 240 ----------VGDIELQGIEEIASAYTPVPGGVGPMTINTLIRQTVEAAEKALG 283

Length = 283

>gnl|CDD|172669 PRK14181, PRK14181, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  231 bits (590), Expect = 3e-74
 Identities = 122/292 (41%), Positives = 175/292 (59%), Gaps = 13/292 (4%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           ++ G   AE I + I + +     +    PGLAV+L+G    S+ YV  K+K   ++G+ 
Sbjct: 2   LLKGAPAAEHILATIKENISASSTA----PGLAVVLIGNDPASEVYVGMKVKKATDLGMV 57

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S         T  ++L  +   N D +I+GILVQLPLP+HLD   IL A+S +KDVDG H
Sbjct: 58  SKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLH 117

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQR 254
           P+N+G L + G    FIPCTP G IELL    + + G++  ++GRSNIVG P  +LL+Q+
Sbjct: 118 PVNMGKLLL-GETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQK 176

Query: 255 H---HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311
           H   +ATV+++H+ ++N  +I   ADI+IAA GV   ++   +   AV++DVGT  V  +
Sbjct: 177 HPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVPAA 236

Query: 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                  GY L+GDV +   +     ITPVPGGVGPMTVAML+ NT +S  R
Sbjct: 237 NPK----GYILVGDVDFNNVVPKCRAITPVPGGVGPMTVAMLMRNTWESYLR 284

Length = 287

>gnl|CDD|184550 PRK14169, PRK14169, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  230 bits (587), Expect = 9e-74
 Identities = 118/290 (40%), Positives = 182/290 (62%), Gaps = 12/290 (4%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           AT +DG++++++I + + + V ++ +     P LAV+LVG    S+ YVRNK +  E++G
Sbjct: 1   ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIG 59

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
           ++S++    +  T+ ++L  ++  N D  ++ ILVQLPLP  LDE  ++DA+  +KDVDG
Sbjct: 60  VRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDG 119

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           F P+++G L     EP  +  TP G + LL    +++ GK  V++GRSNIVG P + L+ 
Sbjct: 120 FSPVSVGRLWA--NEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMV 177

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
            H ATV+I H+ T+N +Q+T EADI++ A GV + +    +KPGAVV+DVG   +    D
Sbjct: 178 NHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVG---ISRGAD 234

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                   L+GDV       +AS ITPVPGGVGPMT+A L++ T+  AKR
Sbjct: 235 GK------LLGDVDEAAVAPIASAITPVPGGVGPMTIASLMAQTVTLAKR 278

Length = 282

>gnl|CDD|172668 PRK14180, PRK14180, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  229 bits (585), Expect = 2e-73
 Identities = 119/288 (41%), Positives = 171/288 (59%), Gaps = 11/288 (3%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
            +IDGKS++++++  +  +V+  K      P L  I+VG    S+TYV +K KAC +VGI
Sbjct: 2   ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGI 61

Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
            S V    +  TE E+L  +   N DSS++ ILVQLPLP H+++  ++ ++  EKDVDGF
Sbjct: 62  DSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGF 121

Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR 254
           HP N+G L +R ++ L   CTPKG + +L   G++  G  AVV+G SN+VG P S LL  
Sbjct: 122 HPTNVGRLQLRDKKCLE-SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLN 180

Query: 255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
             ATV+  H  T + +  T++ADI+I A G  N +    +K GAVV+DVG   VD     
Sbjct: 181 AKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD----- 235

Query: 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                 +++GDV +       + ITPVPGGVGPMT+  LL NT   A+
Sbjct: 236 -----GKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQ 278

Length = 282

>gnl|CDD|172665 PRK14177, PRK14177, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

 Score =  226 bits (576), Expect = 4e-72
 Identities = 118/290 (40%), Positives = 176/290 (60%), Gaps = 15/290 (5%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           ++DGK ++E+IR+ I + +   K    ++P LA ILVG    S+TYV  K+KAC +VG+ 
Sbjct: 5   LLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMG 64

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S +    +  T +E+L  +   N D +++GIL+Q P+P  +DE    D ++LEKDVDG  
Sbjct: 65  SEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVT 124

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
            L+ G L+M G E  ++PCTP G + LL   G+++ GKNAVV+GRS I+G P ++LL   
Sbjct: 125 TLSFGKLSM-GVET-YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEM 182

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           +ATV++ H+ T+N   I  +ADI++ A G    ++  W+  GAV+LD G  P +V     
Sbjct: 183 NATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNPGNV----- 237

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
                   GD+   +A   +S  TPVPGGVGPMT+A+LL  TL S K  +
Sbjct: 238 --------GDIEISKAKDKSSFYTPVPGGVGPMTIAVLLLQTLYSFKEHF 279

Length = 284

>gnl|CDD|201431 pfam00763, THF_DHG_CYH, Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

 Score =  158 bits (402), Expect = 4e-48
 Identities = 58/118 (49%), Positives = 85/118 (72%), Gaps = 1/118 (0%)

Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
            ++DGK++A++I+  + +EV ++K+  G  P LAVILVG+   SQ YVR+K KA EE+GI
Sbjct: 1   KILDGKALAKKIKEELKEEVAKLKEK-GITPKLAVILVGDDPASQVYVRSKRKAAEELGI 59

Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           +S +    +  TE+E+L  +   N D S++GILVQLPLP+H+DE KIL+A+  EKDVD
Sbjct: 60  ESELIRLPEDITEEELLALIEKLNADPSVHGILVQLPLPKHIDENKILNAIDPEKDVD 117

Length = 117

>gnl|CDD|133451 cd05212, NAD_bind_m-THF_DH_Cyclohyd_like, NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

 Score =  104 bits (262), Expect = 2e-27
 Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 25/158 (15%)

Query: 212 IPCTPKGC-------IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264
            PCTP           ELL + GV + GK  +V+GRS IVG P   LLQR  ATV     
Sbjct: 1   GPCTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDW 60

Query: 265 LTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMG 324
            T   +    +AD+V+  +     V   W+KPGA V++            S         
Sbjct: 61  KTIQLQSKVHDADVVVVGSPKPEKVPTEWIKPGATVINC-----------SPTK------ 103

Query: 325 DVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
            +  ++    AS+  P+ GGVG +TVAM + N + S +
Sbjct: 104 -LSGDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSVR 140

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, mono-functional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express a monofunctional DH. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 140

>gnl|CDD|133447 cd01079, NAD_bind_m-THF_DH, NAD binding domain of methylene-tetrahydrofolate dehydrogenase

 Score = 66.3 bits (162), Expect = 8e-13
 Identities = 50/210 (23%), Positives = 72/210 (34%), Gaps = 59/210 (28%)

Query: 187 LEKDVDGFHPLNIGNLAMRGR----EPLF---IPCTPKGCIELL---------IRSGVEI 230
             KDV+G     I NL    R    E      +PCTP   +++L         +  G  +
Sbjct: 1   PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRL 60

Query: 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATV-SI--------------------VHALTKNP 269
            GK   +I RS +VG P + LL    A V S+                    V       
Sbjct: 61  YGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMT 120

Query: 270 EQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCY 328
               S++D+VI      N  V    LK GA+ ++  +                       
Sbjct: 121 LDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIKNFE------------------ 162

Query: 329 EEAMRLASVITPVPGGVGPMTVAMLLSNTL 358
                 AS+  P    +G +T+AMLL N L
Sbjct: 163 PSVKEKASIYVPS---IGKVTIAMLLRNLL 189

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional DHs from S. cerevisiae and certain bacteria. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 197

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	368
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	100.0
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	100.0
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	100.0
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	100.0
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
KOG4230	935	consensus C1-tetrahydrofolate synthase [Coenzyme t	100.0
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	100.0
KOG0089	309	consensus Methylenetetrahydrofolate dehydrogenase/	100.0
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	100.0
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	100.0
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	100.0
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	100.0
PF00763	117	THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cycloh	100.0
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	99.89
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	99.88
PRK12548	289	shikimate 5-dehydrogenase; Provisional	99.88
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	99.87
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	99.87
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	99.87
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	99.87
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	99.86
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	99.86
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	99.8
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	99.78
PRK08306	296	dipicolinate synthase subunit A; Reviewed	99.59
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	99.52
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	99.16
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	99.14
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	99.08
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	99.08
PTZ00075	476	Adenosylhomocysteinase; Provisional	99.02
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	99.01
PRK13940	414	glutamyl-tRNA reductase; Provisional	99.0
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	98.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.75
PRK14982	340	acyl-ACP reductase; Provisional	98.72
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	98.64
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.58
PLN00203	519	glutamyl-tRNA reductase	98.58
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.47
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.46
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.44
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.43
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	98.38
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.37
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.3
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	98.29
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	98.28
PLN02494	477	adenosylhomocysteinase	98.24
PLN02928	347	oxidoreductase family protein	98.19
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.1
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	98.03
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	98.02
COG5322	351	Predicted dehydrogenase [General function predicti	98.02
PRK13243	333	glyoxylate reductase; Reviewed	97.96
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.96
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.94
PRK06932	314	glycerate dehydrogenase; Provisional	97.92
PRK06436	303	glycerate dehydrogenase; Provisional	97.92
PRK06487	317	glycerate dehydrogenase; Provisional	97.89
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	97.88
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	97.87
PRK08605	332	D-lactate dehydrogenase; Validated	97.85
PRK07574	385	formate dehydrogenase; Provisional	97.84
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	97.84
PRK12480	330	D-lactate dehydrogenase; Provisional	97.83
KOG1370	434	consensus S-adenosylhomocysteine hydrolase [Coenzy	97.82
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	97.81
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	97.76
PLN02306	386	hydroxypyruvate reductase	97.75
PRK08291	330	ectoine utilization protein EutC; Validated	97.74
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.72
PLN03139	386	formate dehydrogenase; Provisional	97.66
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	97.65
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.64
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	97.63
PRK08618	325	ornithine cyclodeaminase; Validated	97.61
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.6
PRK06141	314	ornithine cyclodeaminase; Validated	97.58
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	97.57
PRK07340	304	ornithine cyclodeaminase; Validated	97.52
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	97.52
PF08501	83	Shikimate_dh_N: Shikimate dehydrogenase substrate	97.52
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	97.48
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.47
PRK12862	763	malic enzyme; Reviewed	97.38
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.38
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	97.35
PRK07232	752	bifunctional malic enzyme oxidoreductase/phosphotr	97.3
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.3
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.29
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	97.27
COG0281	432	SfcA Malic enzyme [Energy production and conversio	97.24
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.15
PRK14804	311	ornithine carbamoyltransferase; Provisional	97.12
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	97.08
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	97.07
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.05
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.05
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	97.01
PLN02712	667	arogenate dehydrogenase	97.0
PRK12861	764	malic enzyme; Reviewed	97.0
PRK13403	335	ketol-acid reductoisomerase; Provisional	96.97
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.97
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.96
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.93
PRK12562	334	ornithine carbamoyltransferase subunit F; Provisio	96.92
TIGR00670	301	asp_carb_tr aspartate carbamoyltransferase. Ornith	96.91
PLN02256	304	arogenate dehydrogenase	96.89
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.87
PRK01713	334	ornithine carbamoyltransferase; Provisional	96.86
PLN02342	348	ornithine carbamoyltransferase	96.85
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.84
PRK04284	332	ornithine carbamoyltransferase; Provisional	96.82
PRK03515	336	ornithine carbamoyltransferase subunit I; Provisio	96.81
PRK02255	338	putrescine carbamoyltransferase; Provisional	96.8
PRK06407	301	ornithine cyclodeaminase; Provisional	96.77
PRK14805	302	ornithine carbamoyltransferase; Provisional	96.72
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.71
PRK02102	331	ornithine carbamoyltransferase; Validated	96.7
PRK07417	279	arogenate dehydrogenase; Reviewed	96.67
cd05312	279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	96.65
PRK13814	310	pyrB aspartate carbamoyltransferase catalytic subu	96.59
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.58
TIGR00658	304	orni_carb_tr ornithine carbamoyltransferase. Most	96.56
PRK06046	326	alanine dehydrogenase; Validated	96.55
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	96.55
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	96.53
PRK06823	315	ornithine cyclodeaminase; Validated	96.53
PRK06545	359	prephenate dehydrogenase; Validated	96.51
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.48
cd00762	254	NAD_bind_malic_enz NAD(P) binding domain of malic	96.48
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	96.48
PRK08818	370	prephenate dehydrogenase; Provisional	96.47
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	96.46
PRK11891	429	aspartate carbamoyltransferase; Provisional	96.45
PRK15059	292	tartronate semialdehyde reductase; Provisional	96.44
PRK00856	305	pyrB aspartate carbamoyltransferase catalytic subu	96.41
PLN02527	306	aspartate carbamoyltransferase	96.4
PRK14031	444	glutamate dehydrogenase; Provisional	96.38
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.37
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.35
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.35
PF03949	255	Malic_M: Malic enzyme, NAD binding domain; InterPr	96.27
TIGR03316	357	ygeW probable carbamoyltransferase YgeW. Members o	96.25
PRK08192	338	aspartate carbamoyltransferase; Provisional	96.24
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	96.22
PRK13529	563	malate dehydrogenase; Provisional	96.2
PRK08655	437	prephenate dehydrogenase; Provisional	96.19
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.19
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.17
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.14
PRK00779	304	ornithine carbamoyltransferase; Provisional	96.14
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	96.13
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.12
PRK08507	275	prephenate dehydrogenase; Validated	96.12
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.11
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.1
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.09
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.09
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.07
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.07
PRK07589	346	ornithine cyclodeaminase; Validated	96.04
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.02
PRK07200	395	aspartate/ornithine carbamoyltransferase family pr	96.01
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.0
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.0
PLN02688	266	pyrroline-5-carboxylate reductase	95.96
PLN03129	581	NADP-dependent malic enzyme; Provisional	95.91
PRK06949	258	short chain dehydrogenase; Provisional	95.86
PRK10637	457	cysG siroheme synthase; Provisional	95.81
PRK06398	258	aldose dehydrogenase; Validated	95.79
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	95.77
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	95.76
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	95.75
PRK14030	445	glutamate dehydrogenase; Provisional	95.74
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.7
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	95.68
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	95.68
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.67
PRK09414	445	glutamate dehydrogenase; Provisional	95.66
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.65
PRK06523	260	short chain dehydrogenase; Provisional	95.62
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.61
PRK09072	263	short chain dehydrogenase; Provisional	95.6
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	95.59
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.58
PRK12367	245	short chain dehydrogenase; Provisional	95.56
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	95.54
PLN02712	667	arogenate dehydrogenase	95.52
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.49
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.45
PLN02858	1378	fructose-bisphosphate aldolase	95.44
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.42
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.37
PTZ00117	319	malate dehydrogenase; Provisional	95.34
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.32
PRK12828	239	short chain dehydrogenase; Provisional	95.32
PRK07680	273	late competence protein ComER; Validated	95.29
PRK06199	379	ornithine cyclodeaminase; Validated	95.28
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.28
PRK04523	335	N-acetylornithine carbamoyltransferase; Reviewed	95.27
PLN02477	410	glutamate dehydrogenase	95.26
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.26
PRK08862	227	short chain dehydrogenase; Provisional	95.25
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.23
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.23
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	95.23
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	95.22
PRK05866	293	short chain dehydrogenase; Provisional	95.21
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.18
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.16
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.13
PRK01368	454	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.13
PRK04690	468	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.09
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.08
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.05
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.03
PRK06444	197	prephenate dehydrogenase; Provisional	95.02
PLN02858	1378	fructose-bisphosphate aldolase	95.02
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.0
COG0078	310	ArgF Ornithine carbamoyltransferase [Amino acid tr	95.0
PRK12939	250	short chain dehydrogenase; Provisional	94.97
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.94
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	94.94
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.93
PLN02353	473	probable UDP-glucose 6-dehydrogenase	94.9
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	94.89
PRK08339	263	short chain dehydrogenase; Provisional	94.87
PTZ00317	559	NADP-dependent malic enzyme; Provisional	94.87
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	94.87
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	94.87
KOG0068	406	consensus D-3-phosphoglycerate dehydrogenase, D-is	94.87
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.86
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.85
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	94.83
PRK07062	265	short chain dehydrogenase; Provisional	94.79
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	94.78
PRK07063	260	short chain dehydrogenase; Provisional	94.77
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.77
PRK06172	253	short chain dehydrogenase; Provisional	94.77
PLN02253	280	xanthoxin dehydrogenase	94.76
PRK06138	252	short chain dehydrogenase; Provisional	94.75
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	94.73
PRK05867	253	short chain dehydrogenase; Provisional	94.72
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.72
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	94.71
PRK12829	264	short chain dehydrogenase; Provisional	94.69
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.68
PRK06057	255	short chain dehydrogenase; Provisional	94.68
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.68
PRK08265	261	short chain dehydrogenase; Provisional	94.68
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.67
PRK08628	258	short chain dehydrogenase; Provisional	94.66
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.63
PRK05717	255	oxidoreductase; Validated	94.6
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.59
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	94.59
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.58
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	94.53
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	94.52
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	94.52
PRK07890	258	short chain dehydrogenase; Provisional	94.51
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.5
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.5
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	94.5
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	94.49
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	94.48
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	94.46
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	94.46
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	94.45
PRK08223	287	hypothetical protein; Validated	94.45
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	94.44
PRK05872	296	short chain dehydrogenase; Provisional	94.42
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.4
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.4
PRK06182	273	short chain dehydrogenase; Validated	94.38
PLN02514	357	cinnamyl-alcohol dehydrogenase	94.36
PRK09186	256	flagellin modification protein A; Provisional	94.35
PRK06841	255	short chain dehydrogenase; Provisional	94.35
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	94.35
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	94.35
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	94.35
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.32
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.3
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.28
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	94.28
PRK08703	239	short chain dehydrogenase; Provisional	94.28
PRK06125	259	short chain dehydrogenase; Provisional	94.24
PRK09291	257	short chain dehydrogenase; Provisional	94.24
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.24
PRK08264	238	short chain dehydrogenase; Validated	94.24
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.22
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.21
PRK07774	250	short chain dehydrogenase; Provisional	94.2
PRK09242	257	tropinone reductase; Provisional	94.2
PRK07478	254	short chain dehydrogenase; Provisional	94.18
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.18
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.17
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.17
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	94.17
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	94.17
PRK07035	252	short chain dehydrogenase; Provisional	94.15
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.15
PRK07060	245	short chain dehydrogenase; Provisional	94.14
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.14
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.13
CHL00194	317	ycf39 Ycf39; Provisional	94.13
PRK06196	315	oxidoreductase; Provisional	94.13
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.12
COG2910	211	Putative NADH-flavin reductase [General function p	94.09
PRK05854	313	short chain dehydrogenase; Provisional	94.09
PRK07825	273	short chain dehydrogenase; Provisional	94.07
PRK12743	256	oxidoreductase; Provisional	94.07
PF13738	203	Pyr_redox_3: Pyridine nucleotide-disulphide oxidor	94.06
PRK06179	270	short chain dehydrogenase; Provisional	94.06
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	94.06
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	94.05
PRK05876	275	short chain dehydrogenase; Provisional	94.05
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	94.03
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	94.03
PRK01390	460	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.02
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	94.02
PLN02383	344	aspartate semialdehyde dehydrogenase	94.01
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	94.01
PLN02427	386	UDP-apiose/xylose synthase	94.0
PRK08589	272	short chain dehydrogenase; Validated	94.0
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.0
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	93.99
PRK08936	261	glucose-1-dehydrogenase; Provisional	93.98
PRK06194	287	hypothetical protein; Provisional	93.98
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	93.97
PRK08277	278	D-mannonate oxidoreductase; Provisional	93.97
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	93.95
PRK06223	307	malate dehydrogenase; Reviewed	93.94
PRK07856	252	short chain dehydrogenase; Provisional	93.92
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	93.92
PRK07576	264	short chain dehydrogenase; Provisional	93.91
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	93.91
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	93.91
PRK07067	257	sorbitol dehydrogenase; Provisional	93.9
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.89
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	93.88
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	93.88
PRK05225	487	ketol-acid reductoisomerase; Validated	93.86
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.84
PRK06500	249	short chain dehydrogenase; Provisional	93.83
PRK07814	263	short chain dehydrogenase; Provisional	93.82
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	93.82
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.81
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	93.76
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.76
PLN02896	353	cinnamyl-alcohol dehydrogenase	93.69
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	93.68
PLN00198	338	anthocyanidin reductase; Provisional	93.64
KOG0725	270	consensus Reductases with broad range of substrate	93.64
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.64
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.63
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.62
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.62
PLN02695	370	GDP-D-mannose-3',5'-epimerase	93.61
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	93.58
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	93.57
PRK06139	330	short chain dehydrogenase; Provisional	93.57
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.54
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	93.53
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	93.52
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	93.5
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	93.48
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.47
PRK12742	237	oxidoreductase; Provisional	93.46
PRK07326	237	short chain dehydrogenase; Provisional	93.43
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	93.43
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.42
PRK06114	254	short chain dehydrogenase; Provisional	93.33
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	93.32
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	93.29
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	93.28
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.28
PRK05875	276	short chain dehydrogenase; Provisional	93.27
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	93.25
PRK08643	256	acetoin reductase; Validated	93.25
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	93.22
PLN02214	342	cinnamoyl-CoA reductase	93.2
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	93.2
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	93.19
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	93.16
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	93.11
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.11
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	93.11
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	93.05
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	93.04
PRK06198	260	short chain dehydrogenase; Provisional	93.02
PLN02778	298	3,5-epimerase/4-reductase	93.02
PRK06181	263	short chain dehydrogenase; Provisional	93.02
PRK11303	328	DNA-binding transcriptional regulator FruR; Provis	92.98
PRK12827	249	short chain dehydrogenase; Provisional	92.96
PRK06197	306	short chain dehydrogenase; Provisional	92.95
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	92.95
PRK12937	245	short chain dehydrogenase; Provisional	92.94
PRK08226	263	short chain dehydrogenase; Provisional	92.9
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	92.88
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	92.86
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	92.83
PRK08263	275	short chain dehydrogenase; Provisional	92.82
COG2072	443	TrkA Predicted flavoprotein involved in K+ transpo	92.79
PRK11749	457	dihydropyrimidine dehydrogenase subunit A; Provisi	92.78
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	92.78
PRK06914	280	short chain dehydrogenase; Provisional	92.76
PRK09620	229	hypothetical protein; Provisional	92.75
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	92.75
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.72
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	92.72
PRK08278	273	short chain dehydrogenase; Provisional	92.72
PRK14573	809	bifunctional D-alanyl-alanine synthetase A/UDP-N-a	92.71
PRK09135	249	pteridine reductase; Provisional	92.71
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.71
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	92.68
PRK10727	343	DNA-binding transcriptional regulator GalR; Provis	92.67
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	92.66
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.65
PRK07677	252	short chain dehydrogenase; Provisional	92.62
PRK06701	290	short chain dehydrogenase; Provisional	92.61
PRK05993	277	short chain dehydrogenase; Provisional	92.61
PRK07577	234	short chain dehydrogenase; Provisional	92.6
PRK07806	248	short chain dehydrogenase; Provisional	92.59
PRK10423	327	transcriptional repressor RbsR; Provisional	92.58
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	92.58
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	92.57
PRK07201	657	short chain dehydrogenase; Provisional	92.52
PLN00106	323	malate dehydrogenase	92.51
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	92.5
PRK07109	334	short chain dehydrogenase; Provisional	92.48
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	92.48
PLN02602	350	lactate dehydrogenase	92.43
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	92.42
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	92.37
PRK00683	418	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.36
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	92.35
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	92.34
PRK08267	260	short chain dehydrogenase; Provisional	92.29
TIGR01082	448	murC UDP-N-acetylmuramate--alanine ligase. UDP-N-a	92.28
TIGR01087	433	murD UDP-N-acetylmuramoylalanine--D-glutamate liga	92.27
COG0059	338	IlvC Ketol-acid reductoisomerase [Amino acid trans	92.25
PRK07985	294	oxidoreductase; Provisional	92.24
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	92.21
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	92.2
PRK12744	257	short chain dehydrogenase; Provisional	92.2
KOG0409	327	consensus Predicted dehydrogenase [General functio	92.18
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	92.18
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	92.17
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	92.15
PRK05086	312	malate dehydrogenase; Provisional	92.11
PLN02206	442	UDP-glucuronate decarboxylase	92.1
PRK08303	305	short chain dehydrogenase; Provisional	92.09
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	92.08
PRK12779	944	putative bifunctional glutamate synthase subunit b	92.05
PRK06180	277	short chain dehydrogenase; Provisional	92.04
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	92.04
PLN02653	340	GDP-mannose 4,6-dehydratase	92.03
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	92.0
PRK06128	300	oxidoreductase; Provisional	92.0
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	91.98
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	91.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	91.96
PRK07831	262	short chain dehydrogenase; Provisional	91.95
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	91.94
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	91.93
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	91.92
PRK06483	236	dihydromonapterin reductase; Provisional	91.88
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	91.83
PRK04663	438	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	91.82

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=100.00  E-value=2e-101  Score=757.11  Aligned_cols=342  Identities=70%  Similarity=1.135  Sum_probs=322.4

Q ss_pred             cccccchhhhhcccccccccccccccCCCccCCCCCCcccCCCCCCCCCCCCCCcccccceeeeecHHHHHHHHHHHHHH
Q 017679           14 GATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKE   93 (368)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~a~ildGk~ia~~i~~~i~~~   93 (368)
                      +.+++.+..+|+.+++    +++++.+|||++|++|+.|.|++.+    +++.+.....++.+||||++|++|+++++++
T Consensus         4 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ildGk~vA~~i~~~lk~~   75 (345)
T PLN02897          4 SAHTKAFRLATRDVHC----FSSILVSPPLVSLDLPENWIPYSDP----PPPVSFETEQKTVVIDGNVIAEEIRTKIASE   75 (345)
T ss_pred             hhhhhccccchhhhhh----hhhhhcCCcccccccccCCCccccc----cccccccccccceEeehHHHHHHHHHHHHHH
Confidence            4578889999999999    8999999999999999999999955    4444566667889999999999999999999


Q ss_pred             HHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCC
Q 017679           94 VRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLP  173 (368)
Q Consensus        94 v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp  173 (368)
                      +++++++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|++||+|++|||||||+|||
T Consensus        76 v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP  155 (345)
T PLN02897         76 VRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLP  155 (345)
T ss_pred             HHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCC
Confidence            99999887899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHh
Q 017679          174 QHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ  253 (368)
Q Consensus       174 ~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~  253 (368)
                      +|+|+++++++|+|+|||||||+.|+|+|+.|++.++|+||||.||+++|++|+++++||+|+|||||++||+|++++|+
T Consensus       156 ~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~  235 (345)
T PLN02897        156 QHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQ  235 (345)
T ss_pred             CCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHH
Confidence            99999999999999999999999999999986545789999999999999999999999999999999999999999999


Q ss_pred             hCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhc
Q 017679          254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMR  333 (368)
Q Consensus       254 ~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~  333 (368)
                      ++|||||+||++|+++.+++++|||||+|+|+|++|+++|||+|++|||+|+|+.+   +++++.|.+++|||||+++.+
T Consensus       236 ~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~~~---~~~~~~g~klvGDVdfe~v~~  312 (345)
T PLN02897        236 RHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVE---DSSCEFGYRLVGDVCYEEALG  312 (345)
T ss_pred             HCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccc---cccccCCCeeEecccHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999975   333333349999999999999


Q ss_pred             cceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          334 LASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       334 ~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                      +|++||||||||||||++|||+|+++++++|+.
T Consensus       313 ~as~iTPVPGGVGpmTvamLm~N~~~a~~~~~~  345 (345)
T PLN02897        313 VASAITPVPGGVGPMTITMLLCNTLDAAKRIFL  345 (345)
T ss_pred             hccccCCCCCchhHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999863

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=100.00  E-value=1.3e-94  Score=711.75  Aligned_cols=327  Identities=64%  Similarity=1.006  Sum_probs=296.1

Q ss_pred             ccccCCCccCCCCCCcccCCCCCCCC-CCCC--CCcccccceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEe
Q 017679           36 RIIMSPPLITLDLPEIWTPPNSRDCN-PLPQ--RNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILV  112 (368)
Q Consensus        36 ~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~--~~~~~~~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~v  112 (368)
                      ++..+|  +++++|+.|.-....+.+ ..++  ......+++.+||||++|++|++++++++++|+++.|++|+||+|+|
T Consensus        34 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ildGk~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlv  111 (364)
T PLN02616         34 RRCVGP--LRVRTTASGRGCCINSSSSPSPVINADTGSEGGAKVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILV  111 (364)
T ss_pred             ceeccc--cccCccccccccccCCCCCcchhhhhhcCccccCeEeEhHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEe
Confidence            344444  789999999322222111 0111  23444556789999999999999999999999988789999999999


Q ss_pred             CCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccC
Q 017679          113 GERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD  192 (368)
Q Consensus       113 G~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVD  192 (368)
                      |+||+|..|+++|.|+|+++||+++.++||++++|+||++.|++||+|++|||||||+|||+|+|+++++++|+|+||||
T Consensus       112 G~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVD  191 (364)
T PLN02616        112 GDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVD  191 (364)
T ss_pred             CCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhh
Q 017679          193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI  272 (368)
Q Consensus       193 gl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~  272 (368)
                      |||+.|+|+|+.|++.++|+||||+||+++|++|+++++||+|+|||||++||+|+++||+++|||||+||++|+++.++
T Consensus       192 Gl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~  271 (364)
T PLN02616        192 GFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI  271 (364)
T ss_pred             cCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHH
Confidence            99999999999875568899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHH
Q 017679          273 TSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAM  352 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~am  352 (368)
                      +++|||||+|+|+|++|+++|||||++|||+|+|+++   +++++.+.|++|||||+++.++|++||||||||||||++|
T Consensus       272 ~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~~~---~~~~~~g~klvGDVdfe~v~~~as~ITPVPGGVGpmTva~  348 (364)
T PLN02616        272 TREADIIISAVGQPNMVRGSWIKPGAVVIDVGINPVE---DASSPRGYRLVGDVCYEEACKVASAVTPVPGGVGPMTIAM  348 (364)
T ss_pred             HhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccccc---cccccCCCeEEecCcHHHHHhhccccCCCCCchHHHHHHH
Confidence            9999999999999999999999999999999999975   3222223399999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC
Q 017679          353 LLSNTLDSAKRAYGF  367 (368)
Q Consensus       353 Ll~N~v~a~~~~~~~  367 (368)
                      ||+|++++++++.++
T Consensus       349 Ll~N~~~aa~~~~~~  363 (364)
T PLN02616        349 LLSNTLTSAKRIHNF  363 (364)
T ss_pred             HHHHHHHHHHHhhcC
Confidence            999999999988765

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=100.00  E-value=4.3e-93  Score=680.33  Aligned_cols=282  Identities=52%  Similarity=0.840  Sum_probs=274.7

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++||||.+|+++++++++++++++++.++.|+|++|+|||||+|+.|+++|.|+|+++|+.++.++||++++|+||++.|
T Consensus         1 ~~idGk~lA~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I   80 (283)
T COG0190           1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALI   80 (283)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHH
Confidence            37999999999999999999999988789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++|||||||+|||+|+|+++++++|+|+||||||||+|+|+|..+  ++.|+||||.|++++|++|++++.||+
T Consensus        81 ~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~  158 (283)
T COG0190          81 DELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKN  158 (283)
T ss_pred             HHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999976  788999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      |+|||||++||||++.+|++.|||||+||++|+++.+++++|||||+|+|+|+|++.+|+|||++|||+|+|+++     
T Consensus       159 ~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~vk~gavVIDVGinrv~-----  233 (283)
T COG0190         159 VVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVN-----  233 (283)
T ss_pred             EEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccccCCCEEEecCCcccc-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999986     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                          .+|++|||||++++++|++||||||||||||++|||+|++++++++.+.
T Consensus       234 ----~~kl~GDVdf~~v~~~a~~iTPVPGGVGPmTvamLl~Nt~~a~~~~~~~  282 (283)
T COG0190         234 ----DGKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQRGE  282 (283)
T ss_pred             ----CCceEeeccHHHHHHhhcccCCCCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence                3699999999999999999999999999999999999999999987653

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=3e-92  Score=680.61  Aligned_cols=283  Identities=42%  Similarity=0.735  Sum_probs=274.0

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+++||||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|.|+++||+++.++||++++|+||++
T Consensus         1 ~~~il~Gk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~   80 (288)
T PRK14171          1 MNNIIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLIS   80 (288)
T ss_pred             CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            57899999999999999999999998877899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.|. .++|+||||+||+++|++|+++++|
T Consensus        81 ~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~G  159 (288)
T PRK14171         81 KINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTG  159 (288)
T ss_pred             HHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999999999999999999999999999999999773 3789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||++||+|+++||+++|||||+||++|++|++++++|||||+|+|+|++|+++|+|+|++|||+|+|+.+   
T Consensus       160 K~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~~~---  236 (288)
T PRK14171        160 KNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRIS---  236 (288)
T ss_pred             CEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999864   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                            ++|++|||||+++.++|++||||||||||||++|||+|+++++++.+
T Consensus       237 ------~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~  283 (288)
T PRK14171        237 ------GNKIIGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVKAFKDSL  283 (288)
T ss_pred             ------CCCeECCccHHHHHhhceEeCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence                  35899999999999999999999999999999999999999998654

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=4.1e-92  Score=678.47  Aligned_cols=283  Identities=51%  Similarity=0.872  Sum_probs=275.2

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         1 ~~~il~Gk~iA~~i~~~ik~~i~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   79 (284)
T PRK14170          1 MGEIIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLS   79 (284)
T ss_pred             CCeEEEhHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            6789999999999999999999999877 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+++++++++|+|+|||||+||.|+|+|+.|  .++|+||||.||+++|++|+++++|
T Consensus        80 ~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~G  157 (284)
T PRK14170         80 VVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEG  157 (284)
T ss_pred             HHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999987  5789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||++||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+   
T Consensus       158 k~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~~~---  234 (284)
T PRK14170        158 KRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDE---  234 (284)
T ss_pred             CEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999864   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                            +|+++|||||+++.++|++||||||||||||++|||+|+++++++++.+
T Consensus       235 ------~gkl~GDvdfe~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~  283 (284)
T PRK14170        235 ------NNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKM  283 (284)
T ss_pred             ------CCCeecccchHHHHhhccEecCCCCChHHHHHHHHHHHHHHHHHHHhhc
Confidence                  3689999999999999999999999999999999999999999998764

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=100.00  E-value=2.4e-91  Score=677.36  Aligned_cols=294  Identities=61%  Similarity=1.012  Sum_probs=279.3

Q ss_pred             cccceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHH
Q 017679           70 NLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDE  149 (368)
Q Consensus        70 ~~~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~e  149 (368)
                      ..+|+.+||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|
T Consensus         5 ~~~~~~ildGk~vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~e   84 (299)
T PLN02516          5 SDHVAQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAE   84 (299)
T ss_pred             ccccCeEeehHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHH
Confidence            34578899999999999999999999998887899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCC
Q 017679          150 VLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVE  229 (368)
Q Consensus       150 l~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~  229 (368)
                      |++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++
T Consensus        85 l~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~  164 (299)
T PLN02516         85 LISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIP  164 (299)
T ss_pred             HHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999999999999976546789999999999999999999


Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~  309 (368)
                      ++||+|+|||||++||+|+++||+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+
T Consensus       165 l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~~~  244 (299)
T PLN02516        165 IKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVS  244 (299)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999864


Q ss_pred             CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                         +++...+.+++|||||+++.++|++||||||||||||++|||+|+++++++|+.
T Consensus       245 ---~~~~~~g~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~~  298 (299)
T PLN02516        245 ---DPSKKSGYRLVGDVDFAEVSKVAGWITPVPGGVGPMTVAMLLKNTVDGAKRVFA  298 (299)
T ss_pred             ---cccccCCCceEcCcChHHhhhhceEecCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence               322222338999999999999999999999999999999999999999999874

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.8e-91  Score=675.54  Aligned_cols=288  Identities=42%  Similarity=0.713  Sum_probs=274.9

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+++||||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++
T Consensus         1 ~~~ildGk~va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~   80 (294)
T PRK14187          1 ETNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIE   80 (294)
T ss_pred             CcEEeehHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            57899999999999999999999998777899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++|||||||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++++|
T Consensus        81 ~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~G  160 (294)
T PRK14187         81 KINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSG  160 (294)
T ss_pred             HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999987544689999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||++||+|+++||+++|||||+||++|+++.+++++|||||+|+|+|++|+++|||+|++|||+|+|+++   
T Consensus       161 k~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~~~---  237 (294)
T PRK14187        161 SDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIE---  237 (294)
T ss_pred             CEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999964   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                      +..   ..+++|||||+++.++|++||||||||||||++|||+|+++++++..+
T Consensus       238 ~~~---~~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~  288 (294)
T PRK14187        238 EGG---VKKFVGDVDFAEVKKKASAITPVPGGVGPMTIAFLMVNTVIAACNQKG  288 (294)
T ss_pred             CCC---ccceeCCccHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence            100   118999999999999999999999999999999999999999987643

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=5.5e-91  Score=674.74  Aligned_cols=291  Identities=50%  Similarity=0.797  Sum_probs=276.5

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      +.+||||++|++|++++++++++++++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus         3 ~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~   82 (297)
T PRK14168          3 AKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLAL   82 (297)
T ss_pred             CeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            67999999999999999999999998878999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      |++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|+..++|+||||.||+++|++|+++++||
T Consensus        83 I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk  162 (297)
T PRK14168         83 IDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGA  162 (297)
T ss_pred             HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999885447899999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhC----CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~----gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~  309 (368)
                      +|+|||||++||+|+++||+++    |||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|++.
T Consensus       163 ~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~~~  242 (297)
T PRK14168        163 EVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNRVG  242 (297)
T ss_pred             EEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCccC
Confidence            9999999999999999999998    899999999999999999999999999999999999999999999999999863


Q ss_pred             CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                         +.++.++++++|||||+++.++|++||||||||||||++|||+|+++++++|+++
T Consensus       243 ---~~~~~g~~~~~GDVdfe~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~~  297 (297)
T PRK14168        243 ---TNESTGKAILSGDVDFDAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLSL  297 (297)
T ss_pred             ---ccccCCCcceeccccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhCC
Confidence               1111112249999999999999999999999999999999999999999999985

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=5e-91  Score=670.79  Aligned_cols=280  Identities=42%  Similarity=0.714  Sum_probs=272.1

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      |.+||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus         1 ~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~   79 (282)
T PRK14169          1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAK   79 (282)
T ss_pred             CeeeehHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            468999999999999999999999877 8999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      |++||+|++|||||||+|||+|+++++++++|+|+|||||+|+.|+|+|+.+  .++|+||||+||+++|++|+++++||
T Consensus        80 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk  157 (282)
T PRK14169         80 VAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGK  157 (282)
T ss_pred             HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999987  67899999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD  313 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d  313 (368)
                      +|+|||||++||+|+++||+++|||||+||++|++|++++++|||||+|+|+|+||+++|+|+|++|||+|+|++.    
T Consensus       158 ~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~~~----  233 (282)
T PRK14169        158 RVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISRGA----  233 (282)
T ss_pred             EEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccccC----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999864    


Q ss_pred             CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                           +|+++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus       234 -----~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~  280 (282)
T PRK14169        234 -----DGKLLGDVDEAAVAPIASAITPVPGGVGPMTIASLMAQTVTLAKRRA  280 (282)
T ss_pred             -----CCCeeecCcHHHHHhhccEecCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence                 35899999999999999999999999999999999999999998754

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=6.9e-91  Score=672.53  Aligned_cols=285  Identities=47%  Similarity=0.780  Sum_probs=272.7

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus         2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   81 (293)
T PRK14185          2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKV   81 (293)
T ss_pred             eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            58999999999999999999999988789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++|||||||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++||+
T Consensus        82 ~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~  159 (293)
T PRK14185         82 RELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKK  159 (293)
T ss_pred             HHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999977  578999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhhC----CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV  310 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~----gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~  310 (368)
                      |+|||||++||+|+++||+++    |||||+||++|++|.+++++|||||+|+|+|++|+++|||+|++|||+|+|+++ 
T Consensus       160 vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~-  238 (293)
T PRK14185        160 CVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVP-  238 (293)
T ss_pred             EEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCcccc-
Confidence            999999999999999999998    799999999999999999999999999999999999999999999999999965 


Q ss_pred             CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679          311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA  364 (368)
Q Consensus       311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~  364 (368)
                        +++++.+.+++|||||+++.++|++||||||||||||++|||+|+++++++.
T Consensus       239 --~~~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~  290 (293)
T PRK14185        239 --DATRKSGFKLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMKNTLLAGKKA  290 (293)
T ss_pred             --cccccCCCeeEcCCCHHHHHhhccEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence              3332223389999999999999999999999999999999999999999754

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=5.9e-91  Score=669.10  Aligned_cols=278  Identities=38%  Similarity=0.662  Sum_probs=269.0

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+++||||++|++|+++++++++++++++..+|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         1 ~~~ildGk~iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   80 (278)
T PRK14172          1 MGQIINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLIN   80 (278)
T ss_pred             CCeEEeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            57899999999999999999999998773356999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++|
T Consensus        81 ~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~G  158 (278)
T PRK14172         81 EIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEG  158 (278)
T ss_pred             HHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999987  5789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||++||+|+++||+++|||||+||++|++|.+++++|||||+|+|+|++|+++|+|+|++|||+|+|+.+   
T Consensus       159 k~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~---  235 (278)
T PRK14172        159 KEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVN---  235 (278)
T ss_pred             CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999854   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHH
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK  362 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~  362 (368)
                             |+++|||||+++.+++++||||||||||||++|||+|++++++
T Consensus       236 -------gkl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~  278 (278)
T PRK14172        236 -------GKITGDVNFDKVIDKASYITPVPGGVGSLTTTLLIKNVCEALK  278 (278)
T ss_pred             -------CceeeeccHHHHHhhccEecCCCCCccHHHHHHHHHHHHHhcC
Confidence                   5899999999999999999999999999999999999999864

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.1e-90  Score=668.35  Aligned_cols=280  Identities=47%  Similarity=0.767  Sum_probs=271.0

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|.|+++||+++.++||++++|+||++.|
T Consensus         2 ~il~Gk~~a~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I   80 (282)
T PRK14166          2 TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALI   80 (282)
T ss_pred             eeeehHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            58999999999999999999999877 89999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|. .++|+||||+||+++|++|+++++||+
T Consensus        81 ~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~  159 (282)
T PRK14166         81 NTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKD  159 (282)
T ss_pred             HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCE
Confidence            9999999999999999999999999999999999999999999999999773 468999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      |+|||||.+||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+..     
T Consensus       160 vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~~~-----  234 (282)
T PRK14166        160 AVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLE-----  234 (282)
T ss_pred             EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccccC-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999864     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                          +++++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus       235 ----~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~  281 (282)
T PRK14166        235 ----SGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRL  281 (282)
T ss_pred             ----CCCeeCCCCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHhh
Confidence                25899999999999999999999999999999999999999998754

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.3e-90  Score=668.89  Aligned_cols=282  Identities=50%  Similarity=0.818  Sum_probs=274.1

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+.+||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         2 ~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   80 (284)
T PRK14190          2 MAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLA   80 (284)
T ss_pred             CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            5679999999999999999999999877 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|  .++|+||||.||+++|++|+++++|
T Consensus        81 ~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~G  158 (284)
T PRK14190         81 LIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDISG  158 (284)
T ss_pred             HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999987  5789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||++||+|++++|+++|||||+||++|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+|+++   
T Consensus       159 k~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~~~---  235 (284)
T PRK14190        159 KHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRLE---  235 (284)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999864   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                            +||++|||||+++.++|++||||||||||||++|||+|++++++++.+
T Consensus       236 ------~gkl~GDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~  283 (284)
T PRK14190        236 ------NGKLCGDVDFDNVKEKASYITPVPGGVGPMTITMLMHNTVELAKRAGG  283 (284)
T ss_pred             ------CCCeeccCcHHHHhhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence                  358999999999999999999999999999999999999999998764

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.4e-90  Score=672.02  Aligned_cols=288  Identities=45%  Similarity=0.759  Sum_probs=275.1

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         1 ~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~   79 (297)
T PRK14167          1 MTEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYD   79 (297)
T ss_pred             CCeEEeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            5789999999999999999999999876 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++|||||||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|  .+.|+||||+||+++|++|+++++|
T Consensus        80 ~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~G  157 (297)
T PRK14167         80 TIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEG  157 (297)
T ss_pred             HHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999987  5789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhC----CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~----gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~  308 (368)
                      |+|+|||||++||+|+++||+++    +||||+||++|++|++++++|||||+|+|+|++|+++|||+|++|||+|+|++
T Consensus       158 k~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gaiVIDvGin~~  237 (297)
T PRK14167        158 ADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGINRV  237 (297)
T ss_pred             CEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEcccccc
Confidence            99999999999999999999998    89999999999999999999999999999999999999999999999999996


Q ss_pred             CCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          309 DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       309 ~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      +   +.+ +.|.+++|||||+++.++|++||||||||||||++|||+|+++++++.++.
T Consensus       238 ~---~~~-~~g~kl~GDVd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~  292 (297)
T PRK14167        238 D---ADT-EKGYELVGDVEFESAKEKASAITPVPGGVGPMTRAMLLYNTVKAASLQEGV  292 (297)
T ss_pred             C---ccc-ccCCceeecCcHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhcCC
Confidence            4   212 112389999999999999999999999999999999999999999987764

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.4e-90  Score=667.26  Aligned_cols=279  Identities=48%  Similarity=0.767  Sum_probs=270.7

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus         2 ~ildGk~iA~~i~~~ik~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I   80 (282)
T PRK14182          2 NLIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALI   80 (282)
T ss_pred             eeeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            57999999999999999999999877 89999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc-cccCCHHHHHHHHHHhCCCCccc
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL-FIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~-~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      ++||+|++|||||||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.|  ..+ |+||||+||+++|++|+++++||
T Consensus        81 ~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk  158 (282)
T PRK14182         81 ARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGK  158 (282)
T ss_pred             HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999999999999999999999999999999987  355 89999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD  313 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d  313 (368)
                      +|+|||||++||+|+++||+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+..    
T Consensus       159 ~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~~~----  234 (282)
T PRK14182        159 RALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLA----  234 (282)
T ss_pred             EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeeceecC----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999864    


Q ss_pred             CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                           +|+++|||||+++.++|+++|||||||||||++|||+|+++++++|.
T Consensus       235 -----~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~~~~~~~  281 (282)
T PRK14182        235 -----DGKLVGDVEFAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKRTA  281 (282)
T ss_pred             -----CCCeeCCCCHHHHHhhccEecCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence                 35899999999999999999999999999999999999999998874

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=3.5e-90  Score=669.14  Aligned_cols=287  Identities=47%  Similarity=0.735  Sum_probs=275.3

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+.+||||++|++|++++++++++++++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++
T Consensus         1 ~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   80 (297)
T PRK14186          1 MALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEA   80 (297)
T ss_pred             CCEEeehHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            57899999999999999999999998887899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++|||||||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|  ...|+||||.||+++|++|+++++|
T Consensus        81 ~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~G  158 (297)
T PRK14186         81 LIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAG  158 (297)
T ss_pred             HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999977  5679999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||++||+|+++||+++|||||+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+|+.+   
T Consensus       159 k~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~---  235 (297)
T PRK14186        159 KKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHRLP---  235 (297)
T ss_pred             CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccc---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999864   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                      +++.  +|+++|||||+++.++|++||||||||||||++|||+|+++++++..+
T Consensus       236 ~~~~--~gkl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~~  287 (297)
T PRK14186        236 SSDG--KTRLCGDVDFEEVEPVAAAITPVPGGVGPMTVTMLLVNTVLSWQKRHG  287 (297)
T ss_pred             cccc--CCceeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhC
Confidence            2221  368999999999999999999999999999999999999999987653

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=3.9e-90  Score=665.77  Aligned_cols=281  Identities=47%  Similarity=0.740  Sum_probs=273.0

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      .+||||++|++|++++++++++++++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus         2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I   81 (286)
T PRK14184          2 LLLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLI   81 (286)
T ss_pred             eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            58999999999999999999999988789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++||||+||+|||+|+|+++++++|+|+|||||||+.|+|+|+.|  .++|+||||+||+++|++|+++++||+
T Consensus        82 ~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~  159 (286)
T PRK14184         82 AELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKK  159 (286)
T ss_pred             HHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999987  578999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhh----CCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQR----HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV  310 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~----~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~  310 (368)
                      |+|||||++||+|+++||++    +|||||+||++|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+++.+ 
T Consensus       160 vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~~~-  238 (286)
T PRK14184        160 AVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTD-  238 (286)
T ss_pred             EEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeeccC-
Confidence            99999999999999999999    8999999999999999999999999999999999999999999999999999864 


Q ss_pred             CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                               ++++|||||+++.++|++||||||||||||++|||+|+++++++..|+
T Consensus       239 ---------~~l~GDVdf~~v~~~a~~iTPVPGGVGp~Tva~Ll~N~~~a~~~~~~~  286 (286)
T PRK14184        239 ---------DGLVGDCDFEGLSDVASAITPVPGGVGPMTIAQLLVNTVQSWKERVGL  286 (286)
T ss_pred             ---------CCccCCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhCC
Confidence                     359999999999999999999999999999999999999999987774

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1e-89  Score=660.98  Aligned_cols=279  Identities=48%  Similarity=0.791  Sum_probs=270.5

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus         2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I   81 (281)
T PRK14183          2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETI   81 (281)
T ss_pred             eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            58999999999999999999999874489999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++||+
T Consensus        82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~  159 (281)
T PRK14183         82 AMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKD  159 (281)
T ss_pred             HHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999987  578999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      |+|||||++||+|++++|+++|||||+||++|++|.+++++|||||+|+|+|++++++|||+|++|||+|+|+.+     
T Consensus       160 vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~~~-----  234 (281)
T PRK14183        160 VCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTE-----  234 (281)
T ss_pred             EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccccC-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999864     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA  364 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~  364 (368)
                          +|+++|||||+++.+++++||||||||||||++|||+|+++++++.
T Consensus       235 ----~gkl~GDVd~~~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~  280 (281)
T PRK14183        235 ----DGRLVGDVDFENVAKKCSYITPVPGGVGPMTIAMLLSNTLKAAKNR  280 (281)
T ss_pred             ----CCCeECCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHhc
Confidence                3589999999999999999999999999999999999999999753

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=9.9e-90  Score=661.80  Aligned_cols=280  Identities=42%  Similarity=0.702  Sum_probs=271.1

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      .+||||++|++|++++++++++++++.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus         2 ~ildGk~va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I   81 (282)
T PRK14180          2 ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELI   81 (282)
T ss_pred             ceeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            47999999999999999999999887689999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|+ ..+|+||||+||+++|++|+++++||+
T Consensus        82 ~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~  160 (282)
T PRK14180         82 DQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAY  160 (282)
T ss_pred             HHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence            9999999999999999999999999999999999999999999999999773 378999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      |+|||||++||+|+++||.++|||||+||++|++|.+++++|||||+|+|+|+||+++|||+|++|||+|+|+.+     
T Consensus       161 vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~-----  235 (282)
T PRK14180        161 AVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD-----  235 (282)
T ss_pred             EEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccccC-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999854     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                           |+++|||||+++.++|++||||||||||||++|||+|++++++++.
T Consensus       236 -----gkl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~  281 (282)
T PRK14180        236 -----GKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN  281 (282)
T ss_pred             -----CceeCCcCHHHHHhhccEeccCCCChhHHHHHHHHHHHHHHHHHhc
Confidence                 4899999999999999999999999999999999999999998654

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.7e-89  Score=660.68  Aligned_cols=281  Identities=45%  Similarity=0.776  Sum_probs=271.1

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+.+||||++|++|+++++++++.++++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         2 ~~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~   80 (284)
T PRK14193          2 TAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNA   80 (284)
T ss_pred             CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            4679999999999999999999999877 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+|+++++++|+|+|||||||+.|+|+|+.|  ...|+||||+||+++|++|+++++|
T Consensus        81 ~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~G  158 (284)
T PRK14193         81 VIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELAG  158 (284)
T ss_pred             HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999977  5779999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhh--CCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQR--HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV  310 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~--~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~  310 (368)
                      |+|+|||||++||+|++++|++  +|||||+||++|+++++++++|||||+|+|+|++|+++|+|+|++|||+|+|+.. 
T Consensus       159 k~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~~~-  237 (284)
T PRK14193        159 AHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSRAG-  237 (284)
T ss_pred             CEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccccC-
Confidence            9999999999999999999998  7999999999999999999999999999999999999999999999999999864 


Q ss_pred             CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                              +|+++|||| +++.++|++||||||||||||++|||+|+++++++..|
T Consensus       238 --------~gkl~GDvd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~  284 (284)
T PRK14193        238 --------DGKLVGDVH-PDVWEVAGAVSPNPGGVGPMTRAFLLTNVVERAERRAG  284 (284)
T ss_pred             --------CCcEEeecC-HhHHhhCCEEeCCCCChhHHHHHHHHHHHHHHHHHhhC
Confidence                    368999999 89999999999999999999999999999999987543

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.5e-89  Score=660.67  Aligned_cols=278  Identities=41%  Similarity=0.727  Sum_probs=270.2

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      +.+||||++|++|++++++++++++++.+.+|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus         3 ~~ildGk~ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~   82 (284)
T PRK14177          3 PILLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGV   82 (284)
T ss_pred             CeEeEhHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            67999999999999999999999998877889999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      |++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++||
T Consensus        83 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~Gk  160 (284)
T PRK14177         83 IDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVTGK  160 (284)
T ss_pred             HHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999987  57899999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD  313 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d  313 (368)
                      +|+|||||++||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+      
T Consensus       161 ~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~------  234 (284)
T PRK14177        161 NAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP------  234 (284)
T ss_pred             EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc------
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999985      


Q ss_pred             CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                             +++|||||+++.++|++||||||||||||++|||+|+++++++.+.
T Consensus       235 -------~~~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~  280 (284)
T PRK14177        235 -------GNVGDIEISKAKDKSSFYTPVPGGVGPMTIAVLLLQTLYSFKEHFT  280 (284)
T ss_pred             -------cccCCcCHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHhccC
Confidence                   3789999999999999999999999999999999999999987653

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.3e-89  Score=660.24  Aligned_cols=281  Identities=43%  Similarity=0.762  Sum_probs=272.7

Q ss_pred             cceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679           72 QTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL  151 (368)
Q Consensus        72 ~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~  151 (368)
                      .|+++||||++|++|+++++++++.++++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus         6 ~~~~ildGk~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~   85 (287)
T PRK14176          6 YESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELL   85 (287)
T ss_pred             cceEEEEhHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            56899999999999999999999999887789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCc
Q 017679          152 NALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIM  231 (368)
Q Consensus       152 ~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~  231 (368)
                      +.|++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++
T Consensus        86 ~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~  163 (287)
T PRK14176         86 ELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIE  163 (287)
T ss_pred             HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999987  578999999999999999999999


Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS  311 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~  311 (368)
                      ||+|+|||||++||+|++++|+++|||||+||++|+++.+++++|||||+|+|+|++|+++|+++|++|||+|+|+.+  
T Consensus       164 Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~~~--  241 (287)
T PRK14176        164 GKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITKEE--  241 (287)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccccC--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999743  


Q ss_pred             CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679          312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA  364 (368)
Q Consensus       312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~  364 (368)
                              |+++|||||+++.++|+++|||||||||||++|||+|+++++++.
T Consensus       242 --------gkl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~  286 (287)
T PRK14176        242 --------DKVYGDVDFENVIKKASLITPVPGGVGPLTIAMLMKHVLMCAEKS  286 (287)
T ss_pred             --------CCccCCcCHHHHHhhceEcCCCCCCChHHHHHHHHHHHHHHHHhc
Confidence                    589999999999999999999999999999999999999998754

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.8e-89  Score=660.96  Aligned_cols=280  Identities=43%  Similarity=0.710  Sum_probs=267.0

Q ss_pred             eeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHH
Q 017679           76 VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALS  155 (368)
Q Consensus        76 ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~  155 (368)
                      +||||++|++|+++++++++++    +++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|+
T Consensus         2 ildGk~iA~~i~~~~k~~v~~l----~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~   77 (287)
T PRK14181          2 LLKGAPAAEHILATIKENISAS----STAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIH   77 (287)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence            7999999999999999999987    689999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceE
Q 017679          156 NYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNA  235 (368)
Q Consensus       156 ~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~V  235 (368)
                      +||+|++|||||||+|||+|+++++++++|+|+|||||+||.|+|+|+.|+ .++|+||||+||+++|++|+++++||+|
T Consensus        78 ~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~v  156 (287)
T PRK14181         78 RLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHV  156 (287)
T ss_pred             HHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEE
Confidence            999999999999999999999999999999999999999999999999874 3679999999999999999999999999


Q ss_pred             EEEccCccchHHHHHHHhhC----CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679          236 VVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS  311 (368)
Q Consensus       236 vVIG~g~~VGrpla~lL~~~----gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~  311 (368)
                      +|||||++||+|+++||+++    |||||+||++|+++++++++|||||+|+|+|++|+++|+|+|++|||+|+|++.  
T Consensus       157 vViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~~~--  234 (287)
T PRK14181        157 AIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVP--  234 (287)
T ss_pred             EEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccc--
Confidence            99999999999999999999    899999999999999999999999999999999999999999999999999863  


Q ss_pred             CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679          312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA  364 (368)
Q Consensus       312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~  364 (368)
                       +... ++.+++|||||+++.++|+++|||||||||||++|||+|++++++++
T Consensus       235 -~~~~-~g~kl~GDVd~e~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~  285 (287)
T PRK14181        235 -AANP-KGYILVGDVDFNNVVPKCRAITPVPGGVGPMTVAMLMRNTWESYLRH  285 (287)
T ss_pred             -cccC-CCCeeEeccchHHHHhhcccccCCCCchHHHHHHHHHHHHHHHHHhh
Confidence             1111 12289999999999999999999999999999999999999999865

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=5.1e-89  Score=658.13  Aligned_cols=281  Identities=47%  Similarity=0.788  Sum_probs=272.9

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      +.+||||++|++|++++++++++++++ |++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus         3 ~~ildGk~va~~i~~~lk~~i~~l~~~-g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~   81 (285)
T PRK14189          3 AQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLAR   81 (285)
T ss_pred             CeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            679999999999999999999999876 8999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      |++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++||
T Consensus        82 I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk  159 (285)
T PRK14189         82 IDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLRGA  159 (285)
T ss_pred             HHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999977  57899999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD  313 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d  313 (368)
                      +|+|||||++||+|++++|.++|||||+||++|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+|+..    
T Consensus       160 ~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~~~----  235 (285)
T PRK14189        160 HAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDD----  235 (285)
T ss_pred             EEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccccC----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999864    


Q ss_pred             CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                           +|+++|||||+++.++|++||||||||||||++|||+|++++++++..
T Consensus       236 -----~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~Ll~N~~~a~~~~~~  283 (285)
T PRK14189        236 -----AGKLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLVNTIEAAERAAA  283 (285)
T ss_pred             -----CCCeeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhc
Confidence                 358999999999999999999999999999999999999999998764

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=4.1e-89  Score=658.34  Aligned_cols=282  Identities=48%  Similarity=0.786  Sum_probs=274.1

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      +.+||||++|++|++++++++++|+++.+++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus         3 ~~ildGk~va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~   82 (285)
T PRK10792          3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLAL   82 (285)
T ss_pred             CeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            67999999999999999999999988777899999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      |++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|  .++|+||||.||+++|++|+++++||
T Consensus        83 I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk  160 (285)
T PRK10792         83 IDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTYGL  160 (285)
T ss_pred             HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999977  57899999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD  313 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d  313 (368)
                      +|+|||||++||+|++++|+++|||||+||++|++|++++++|||||+|+|+|++|+++|+++|++|||+|+|+++    
T Consensus       161 ~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~~~----  236 (285)
T PRK10792        161 NAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLE----  236 (285)
T ss_pred             EEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHcCCCcEEEEccccccc----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999875    


Q ss_pred             CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                           +|+++|||||+++.++|+++|||||||||||++|||+|+++++++|.+
T Consensus       237 -----~gk~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~N~~~a~~~~~~  284 (285)
T PRK10792        237 -----DGKLVGDVEFETAAERASWITPVPGGVGPMTVATLLENTLQACEEYHD  284 (285)
T ss_pred             -----CCCcCCCcCHHHHHhhccCcCCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence                 358999999999999999999999999999999999999999998874

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.1e-88  Score=655.48  Aligned_cols=282  Identities=46%  Similarity=0.782  Sum_probs=274.5

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+++||||++|++|++++++++++++++.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         1 ~~~ildGk~ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~   80 (284)
T PRK14179          1 MTEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLD   80 (284)
T ss_pred             CCeEEEhHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            57899999999999999999999998877899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++|
T Consensus        81 ~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~G  158 (284)
T PRK14179         81 LIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEG  158 (284)
T ss_pred             HHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999976  6789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||+|++||+|+|++|+++|||||+||++|+++++++++|||||+|+|+|++|+.+|+++|++|||+|+|+..   
T Consensus       159 k~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~~~---  235 (284)
T PRK14179        159 KHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNRDE---  235 (284)
T ss_pred             CEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCccccCCHHHccCCcEEEEecceecC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999864   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                            +|+++|||||+++.++|++||||||||||||++|||+|+++++++|+
T Consensus       236 ------~gkl~GDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~  282 (284)
T PRK14179        236 ------NGKLIGDVDFDEVAEVASYITPVPGGVGPMTITMLMEQTYQAALRSL  282 (284)
T ss_pred             ------CCCeecCccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence                  35899999999999999999999999999999999999999999886

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.1e-88  Score=655.35  Aligned_cols=280  Identities=46%  Similarity=0.745  Sum_probs=272.0

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus         2 ~il~Gk~~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I   81 (285)
T PRK14191          2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLI   81 (285)
T ss_pred             eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            58999999999999999999999877789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++||+
T Consensus        82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~  159 (285)
T PRK14191         82 KDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKD  159 (285)
T ss_pred             HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999987  578999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      |+|||||++||+|+|++|+++|||||+||++|++|.+++++|||||+|+|+|++++++|+|+|++|||+|+|+++     
T Consensus       160 vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~~~-----  234 (285)
T PRK14191        160 VVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLN-----  234 (285)
T ss_pred             EEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeeccccc-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999864     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                          +|+++|||||+++.+++++||||||||||||++|||+|+++++++..
T Consensus       235 ----~gklvGDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~  281 (285)
T PRK14191        235 ----DGRLVGDVDFENVAPKASFITPVPGGVGPMTIVSLLENTLIAAEKRQ  281 (285)
T ss_pred             ----CCceeccccHHHHhhhccEEecCCCCChHHHHHHHHHHHHHHHHHHH
Confidence                36899999999999999999999999999999999999999998653

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=5.7e-88  Score=650.98  Aligned_cols=278  Identities=42%  Similarity=0.707  Sum_probs=266.4

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      +.+||||++|++|+++++++++++    +++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus         3 ~~il~Gk~vA~~i~~~l~~~v~~l----~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~   78 (287)
T PRK14173          3 ARELSGPPAAEAVYAELRARLAKL----PFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLEL   78 (287)
T ss_pred             CeEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            679999999999999999999987    4789999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      |++||+|++||||+||+|||+|+++.+++++|+|+|||||||+.|+|+|+.|  .+.|+||||+||+++|++|+++++||
T Consensus        79 I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk  156 (287)
T PRK14173         79 IARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLAGK  156 (287)
T ss_pred             HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999987  46799999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD  313 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d  313 (368)
                      +|+|||||++||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++++++|||+|++|||+|+|++.   +
T Consensus       157 ~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~~~---~  233 (287)
T PRK14173        157 EVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRVG---G  233 (287)
T ss_pred             EEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccc---C
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999852   1


Q ss_pred             CCCCCCcE--EEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          314 PSCEYGYR--LMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       314 ~t~~~~~k--l~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                      +    +|+  ++|||| +++.++|++||||||||||||++|||+|+++++++..
T Consensus       234 ~----~gk~~l~GDVd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~  282 (287)
T PRK14173        234 N----GGRDILTGDVH-PEVAEVAGALTPVPGGVGPMTVAMLMANTVIAALRRR  282 (287)
T ss_pred             C----CCceeeecccc-HhHHhhCcEEecCCCChhHHHHHHHHHHHHHHHHHHc
Confidence            1    246  999999 6889999999999999999999999999999998754

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=8.7e-88  Score=650.18  Aligned_cols=283  Identities=47%  Similarity=0.804  Sum_probs=273.8

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+.+||||++|++|+++++++++.|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         2 ~~~il~Gk~ia~~i~~~~~~~v~~l~~~-g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~   80 (286)
T PRK14175          2 VAKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLN   80 (286)
T ss_pred             CCeEeeHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            4679999999999999999999999876 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|  .++|+||||.||+++|++|+++++|
T Consensus        81 ~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~G  158 (286)
T PRK14175         81 ELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLEG  158 (286)
T ss_pred             HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999987  5789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||++||+|++++|.++||+||+||++|+++.+++++|||||+|+|+|++|+++|+++|++|||+|+++..   
T Consensus       159 k~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~~~---  235 (286)
T PRK14175        159 KNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPDE---  235 (286)
T ss_pred             CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCcCC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999854   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                            +|+++|||||+++.++++++|||||||||||++|||+|+++++++..++
T Consensus       236 ------~gkl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~~~~  284 (286)
T PRK14175        236 ------NGKLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGI  284 (286)
T ss_pred             ------CCCeecCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence                  3589999999999999999999999999999999999999999987765

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.7e-87  Score=650.67  Aligned_cols=289  Identities=48%  Similarity=0.792  Sum_probs=274.0

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      .+||||++|++|++++++++++++++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus         2 ~il~Gk~iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I   81 (295)
T PRK14174          2 LIIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKI   81 (295)
T ss_pred             EEEeHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            47999999999999999999999887789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++++||+
T Consensus        82 ~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~  161 (295)
T PRK14174         82 EDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKH  161 (295)
T ss_pred             HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence            99999999999999999999999999999999999999999999999998753478999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhh----CCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQR----HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV  310 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~----~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~  310 (368)
                      |+|||||++||+|+++||++    +|++||+||++|.++++++++|||||+|+|+|++|+++|+|+|++|||+|+++++ 
T Consensus       162 vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~vk~GavVIDVgi~~~~-  240 (295)
T PRK14174        162 CVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIE-  240 (295)
T ss_pred             EEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHcCCCCEEEEeeccccc-
Confidence            99999999999999999998    7899999999999999999999999999999999999999999999999999864 


Q ss_pred             CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                        +++++.+.+++|||||+++.++|++||||||||||||++|||+|+++++++...
T Consensus       241 --~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~~  294 (295)
T PRK14174        241 --DPSTKSGYRLVGDVDYEGVSAKASAITPVPGGVGPMTIAMLLKNTLQSFERVNN  294 (295)
T ss_pred             --cccccCCCceECCcCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence              322222338999999999999999999999999999999999999999987653

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.9e-86  Score=644.12  Aligned_cols=283  Identities=47%  Similarity=0.802  Sum_probs=273.2

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      ++.+||||++|++|++++++++++++++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         3 ~~~il~Gk~iA~~i~~~lk~~i~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~   81 (301)
T PRK14194          3 SAKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLA   81 (301)
T ss_pred             CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            4679999999999999999999999877 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+|+.+++++|+|+||||||||.|+|+|+.|  .++|+||||.||+++|++|+++++|
T Consensus        82 ~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~G  159 (301)
T PRK14194         82 LIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLTG  159 (301)
T ss_pred             HHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999987  5789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||+|++||+|+|.+|+++|++||+||++|+++++.+++|||||+++|.|++++++|+++|++|||+|+|++.   
T Consensus       160 k~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~~~---  236 (301)
T PRK14194        160 KHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRID---  236 (301)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcccHhhccCCcEEEEecccccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999863   


Q ss_pred             CCCCCCCc--EEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          313 DPSCEYGY--RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       313 d~t~~~~~--kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                      +     +|  +++|||||+++.++|++||||||||||||++|||+|+++++++|+.
T Consensus       237 ~-----~g~~kl~GDvdf~~~~~~a~~iTPVPGGVGp~Tva~L~~N~~~a~~~~~~  287 (301)
T PRK14194        237 D-----DGRSRLVGDVDFDSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAH  287 (301)
T ss_pred             C-----CCCcceecccchHHHHhhcceecCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            1     23  8999999999999999999999999999999999999999998863

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.1e-86  Score=637.94  Aligned_cols=274  Identities=46%  Similarity=0.733  Sum_probs=266.3

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++||||++|++|+++++++++++    |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus         1 ~il~Gk~~a~~i~~~~~~~v~~l----g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I   76 (279)
T PRK14178          1 MILDGKAVSEKRLELLKEEIIES----GLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERI   76 (279)
T ss_pred             CeeeHHHHHHHHHHHHHHHHHHh----CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence            37999999999999999999987    78999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++||||+||+|||+|+|+++++++|+|+|||||||+.|+|+|+.|  .++|+||||.|++++|++|+++++||+
T Consensus        77 ~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~  154 (279)
T PRK14178         77 RRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKR  154 (279)
T ss_pred             HHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCE
Confidence            999999999999999999999999999999999999999999999999976  578999999999999999999999999


Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      |+|||||..||+|++++|.++||+||+||++|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+++.+     
T Consensus       155 V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~~~-----  229 (279)
T PRK14178        155 AVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVN-----  229 (279)
T ss_pred             EEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccccC-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999853     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA  364 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~  364 (368)
                           ||++|||||+++.++++++|||||||||||++|||+|+++++++.
T Consensus       230 -----gkl~GDvdf~~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~  274 (279)
T PRK14178        230 -----GKLCGDVDFDAVKEIAGAITPVPGGVGPMTIATLMENTFDAAKMR  274 (279)
T ss_pred             -----CCCcCCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence                 589999999999999999999999999999999999999999864

>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]

Probab=100.00  E-value=1.4e-85  Score=665.76  Aligned_cols=290  Identities=50%  Similarity=0.830  Sum_probs=283.8

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL  151 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~  151 (368)
                      +|.||+|+.+|++++++++++++.+|+.. +++|.|+|||||++++|..|+|||.|+++++||++.+++||++++|-||+
T Consensus         2 ~a~IL~Gk~la~kvr~~v~~eI~~ik~~~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~ell   81 (935)
T KOG4230|consen    2 VAEILSGKELARKVREDVAEEIQSIKEHHPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGELL   81 (935)
T ss_pred             cchhhccHHHHHHHHHHHHHHHHHHHhhCCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHHH
Confidence            47899999999999999999999999876 79999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCc
Q 017679          152 NALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIM  231 (368)
Q Consensus       152 ~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~  231 (368)
                      ..|.+||+|+.||||+||+|||.|+|++.+.++|+|+||||||+.+|.|+|..++.++.|+||||.|||+||+++++.+.
T Consensus        82 ~~I~~lNeD~tvHGiiVQLPLp~hide~~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v~  161 (935)
T KOG4230|consen   82 REIKALNEDPTVHGIIVQLPLPAHIDEDTVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFVA  161 (935)
T ss_pred             HHHHhccCCCccceEEEeccCccccchhhHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCccc
Confidence            99999999999999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS  311 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~  311 (368)
                      ||++||+|||.+||.|++.+|...++|||+|||+|+++.+++.+|||||.|+|.|+||+.||+|||++|||||+|++.  
T Consensus       162 Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWiKpGavVIDvGINyvp--  239 (935)
T KOG4230|consen  162 GKNAVVLGRSKIVGSPIAALLLWANATVTICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWIKPGAVVIDVGINYVP--  239 (935)
T ss_pred             cceeEEEecccccCChHHHHHHhcCceEEEecCCCccHHHHhccCCEEEEEcCCcceeecccccCCcEEEEccccccC--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999998  


Q ss_pred             CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                       |+++.+|.|++|||||+++++++++||||||||||||+||||+|++++++|+.
T Consensus       240 -D~~Kksg~klvGDVdfe~Akevas~ITPVPGGVGPMTVAMLmqNtveaAKR~r  292 (935)
T KOG4230|consen  240 -DPSKKSGFKLVGDVDFESAKEVASFITPVPGGVGPMTVAMLMQNTVEAAKRQR  292 (935)
T ss_pred             -CCCCcccceEeeecchHhhhhhhhccccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence             88877788999999999999999999999999999999999999999999875

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=2.3e-84  Score=629.62  Aligned_cols=287  Identities=48%  Similarity=0.787  Sum_probs=273.1

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+.+||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus         1 ~~~il~Gk~~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~   80 (296)
T PRK14188          1 MATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLA   80 (296)
T ss_pred             CCEEEEHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence            57899999999999999999999998777899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|  .++|+||||+||+++|++|+++++|
T Consensus        81 ~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~G  158 (296)
T PRK14188         81 LIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSG  158 (296)
T ss_pred             HHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999977  6789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||+.||+|+|.+|+++|++|++||++|+++++.+++|||||+++|.|++++.+|+++|++|||+|+|++.   
T Consensus       159 k~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~~~---  235 (296)
T PRK14188        159 LNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINRIP---  235 (296)
T ss_pred             CEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999853   


Q ss_pred             CCCCCCCc--EEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          313 DPSCEYGY--RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       313 d~t~~~~~--kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                      ++.+. .|  +++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus       236 ~~~~~-~g~~~l~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~  289 (296)
T PRK14188        236 APEKG-EGKTRLVGDVAFAEAAEVAGAITPVPGGVGPMTIACLLANTLTAACRAA  289 (296)
T ss_pred             Ccccc-CCCceeeCCCCHHHHHhhccEecCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            11100 13  799999999999999999999999999999999999999998754

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=100.00  E-value=1.1e-80  Score=601.51  Aligned_cols=282  Identities=41%  Similarity=0.693  Sum_probs=272.3

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      |+++||||++|++|++++++++++++++.|++|+|++|+||+||+|..|+++|+++|+++||+++++.||++++++||.+
T Consensus         2 ~~~~l~gk~~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~   81 (283)
T PRK14192          2 MALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLA   81 (283)
T ss_pred             CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence            46799999999999999999999999887899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|.|+|+.|  .+.|.||||.|++++|++|+++++|
T Consensus        82 ~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~G  159 (283)
T PRK14192         82 KIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELAG  159 (283)
T ss_pred             HHHHHhCCCCCCEEEEeCCCccccCHHHHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999977  5789999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      |+|+|||||++||+|++++|+++||+||+|||++++|.+.+++|||||+|||+|++++.+|+++|++|||+||++.+   
T Consensus       160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~lk~gavViDvg~n~~~---  236 (283)
T PRK14192        160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRD---  236 (283)
T ss_pred             CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHcCCCCEEEEEEEeecC---
Confidence            99999999998899999999999999999999999999999999999999999999999999999999999999864   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                             ++++|||||+++.+++++||||||||||||++|||+|+++++++.+|
T Consensus       237 -------~~~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~n~~~~~~~~~~  283 (283)
T PRK14192        237 -------GGGVGDIELQGIEEIASAYTPVPGGVGPMTINTLIRQTVEAAEKALG  283 (283)
T ss_pred             -------CCCcccccHHHhhccceEeCCCCCcChHHHHHHHHHHHHHHHHHhcC
Confidence                   35899999999999999999999999999999999999999998765

>KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism]

Probab=100.00  E-value=2.5e-80  Score=584.10  Aligned_cols=291  Identities=59%  Similarity=0.899  Sum_probs=280.8

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      ++.+++||.+|+.+++++.++++.+++..|..|+|+.++||+||+|+.|+.+|+|+|+++||.++.+.||++.+++++++
T Consensus         7 ~~~viagk~~a~~i~~~i~~e~~~~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~   86 (309)
T KOG0089|consen    7 TAVVIAGKVAATFIRQEIANEVEGMKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELES   86 (309)
T ss_pred             ceEEEehhHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHH
Confidence            68899999999999999999999999998999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG  232 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G  232 (368)
                      .|.++|+|++||||+||+|+|+|+++++|++.++|+|||||||+.|.|+|.+.++.+.|+||||.||+++|+++++.+.|
T Consensus        87 ~i~~~N~d~sV~GilV~~pv~~h~~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~G  166 (309)
T KOG0089|consen   87 AIAEANNDPSVHGILVQLPVPQHIQEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYG  166 (309)
T ss_pred             HHHHhcCCCceeeEEEEeeccccccHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecC
Confidence            99999999999999999999999999999999999999999999999999998888889999999999999999999999


Q ss_pred             ceEEEEccCccchHHHHHHHhhC--------CCEEEEEeCCCC--CHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH--------HATVSIVHALTK--NPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLD  302 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~--------gAtVti~h~~t~--~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVID  302 (368)
                      |+++|+|||++||+|+|++|++.        .||||++||.|+  +++.++++|||+|+|+|.|++|+.||+|+|+.|||
T Consensus       167 Kn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~Ik~Ga~vid  246 (309)
T KOG0089|consen  167 KNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMIKPGAAVID  246 (309)
T ss_pred             ceEEEEcccccccchHHHHHhhcCCcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCcccccceeecCceeEe
Confidence            99999999999999999999998        689999999996  46899999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          303 VGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       303 vg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                      +|+|++.   |+++..+.+|+|||||++++++|++||||||||||||+||||+|+++++++.+.
T Consensus       247 vgin~v~---dp~~a~~~klvgdvdFe~~~~kag~itpVPggvGpmTiAMLl~Ntl~~ak~v~~  307 (309)
T KOG0089|consen  247 VGINRVH---DPSTAVGIKLVGDVDFEEASKKAGAITPVPGGVGPMTIAMLLRNTLRAAKRVFL  307 (309)
T ss_pred             cCCCccc---ccccceeeEEeeeccHHHhhhhcCccccCCCCCCchhHHHHHHHHHHHHHHHhc
Confidence            9999998   776555679999999999999999999999999999999999999999998764

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=100.00  E-value=4.9e-53  Score=377.90  Aligned_cols=160  Identities=54%  Similarity=0.864  Sum_probs=139.4

Q ss_pred             CcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhcc
Q 017679          195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITS  274 (368)
Q Consensus       195 ~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~  274 (368)
                      ||+|+|+|+.|  ++.|+||||+|++++|++|+++++||+|+|||||++||+|++++|+++|||||+||++|++++++++
T Consensus         1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~   78 (160)
T PF02882_consen    1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR   78 (160)
T ss_dssp             SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred             CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence            79999999987  7899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHH
Q 017679          275 EADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLL  354 (368)
Q Consensus       275 ~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl  354 (368)
                      +|||||+|+|+|++|+++|+|+|++|||+|+++..        .+++++|||||++++++++++|||||||||||++|||
T Consensus        79 ~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~~~--------~~~~~~GDv~~~~~~~~a~~itPvPgGVGplT~a~L~  150 (160)
T PF02882_consen   79 RADIVVSAVGKPNLIKADWIKPGAVVIDVGINYVP--------GDGKLVGDVDFESVKEKASAITPVPGGVGPLTVAMLM  150 (160)
T ss_dssp             TSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEEET--------TTTEEEESB-HHHHHTTCSEEE-SSSSCHHHHHHHHH
T ss_pred             eccEEeeeeccccccccccccCCcEEEecCCcccc--------ccceeeecccHHHhhccceEEeeCCCCccHHHHHHHH
Confidence            99999999999999999999999999999999872        1479999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH
Q 017679          355 SNTLDSAKRA  364 (368)
Q Consensus       355 ~N~v~a~~~~  364 (368)
                      +|++++++++
T Consensus       151 ~N~v~a~~~~  160 (160)
T PF02882_consen  151 KNLVKAAKRQ  160 (160)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhC
Confidence            9999999874

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=100.00  E-value=4.9e-47  Score=347.36  Aligned_cols=158  Identities=31%  Similarity=0.441  Sum_probs=144.4

Q ss_pred             cccccCccCcceeeeccccCC-------cCccccCCHHHHHHHHHHhCC---------CCccceEEEEccCccchHHHHH
Q 017679          187 LEKDVDGFHPLNIGNLAMRGR-------EPLFIPCTPKGCIELLIRSGV---------EIMGKNAVVIGRSNIVGLPTSL  250 (368)
Q Consensus       187 p~KDVDgl~~~N~G~L~~g~~-------~~~~~PcTa~gv~~lL~~~~i---------~l~GK~VvVIG~g~~VGrpla~  250 (368)
                      |+|||||+|+.|+|+|+.|..       .++|+||||+||+++|++|++         +++||+|+|||||++||+|+++
T Consensus         1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~   80 (197)
T cd01079           1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA   80 (197)
T ss_pred             CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence            789999999999999987642       268999999999999999977         8999999999999999999999


Q ss_pred             HHhhCCCEEEEE---------------eCCC--CC----HhhhccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecCCC
Q 017679          251 LLQRHHATVSIV---------------HALT--KN----PEQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       251 lL~~~gAtVti~---------------h~~t--~~----L~~~~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~~  308 (368)
                      ||+++|||||+|               |++|  ++    +.+++++|||||+|+|+|+| |++||||+|++|||+|++. 
T Consensus        81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~-  159 (197)
T cd01079          81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIK-  159 (197)
T ss_pred             HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc-
Confidence            999999999999               6776  45    88999999999999999999 9999999999999999873 


Q ss_pred             CCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          309 DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       309 ~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                                      |+| +++.++|+++|||   |||||++|||+|+++++++++
T Consensus       160 ----------------dvd-~~v~~~as~iTPv---VGpvTva~L~~Nlv~~~~~~~  196 (197)
T cd01079         160 ----------------NFE-PSVKEKASIYVPS---IGKVTIAMLLRNLLRLYHNQH  196 (197)
T ss_pred             ----------------Ccc-HhHHhhcCEeCCC---cCHHHHHHHHHHHHHHHHHhc
Confidence                            344 6788999999998   999999999999999998654

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=100.00  E-value=4.6e-41  Score=303.00  Aligned_cols=168  Identities=58%  Similarity=0.918  Sum_probs=158.2

Q ss_pred             cccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          187 LEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       187 p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |+|||||++..|.|+++.+  ...|+|||+.+++++++++..+++||+|+|||+|+++|++++.+|.++|++|++++|++
T Consensus         1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080           1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            6899999999999999865  57899999999999999999999999999999999889999999999999999999999


Q ss_pred             CCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCccc
Q 017679          267 KNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVG  346 (368)
Q Consensus       267 ~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVG  346 (368)
                      .++.+.+++|||||+|||+|++|+.++++++.++||++.++..   |.+   ++|++||+||+.+++++.++||+|||||
T Consensus        79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~prdv---d~~---~~~~~G~~d~~~~~~~~~~~~~~pggvg  152 (168)
T cd01080          79 KNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINRVP---DKS---GGKLVGDVDFESAKEKASAITPVPGGVG  152 (168)
T ss_pred             hhHHHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCCcc---ccc---CCCeeCCcCHHHHHhhccCcCCCCCcCh
Confidence            9999999999999999999999999999999999999999975   422   5689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 017679          347 PMTVAMLLSNTLDSAK  362 (368)
Q Consensus       347 p~T~amLl~N~v~a~~  362 (368)
                      |+|+++||+|++++++
T Consensus       153 p~t~a~l~~n~~~~~~  168 (168)
T cd01080         153 PMTVAMLMKNTVEAAK  168 (168)
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            9999999999998763

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=100.00  E-value=8.3e-41  Score=293.19  Aligned_cols=137  Identities=36%  Similarity=0.554  Sum_probs=129.7

Q ss_pred             CcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCC
Q 017679          207 REPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       207 ~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p  286 (368)
                      .+++|+||||+|++++|++|+++++||+|+|+|||..+|+|++.+|+++|++|++||++|+++++++++|||||+|+|++
T Consensus         3 ~~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~   82 (140)
T cd05212           3 CTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKP   82 (140)
T ss_pred             CCCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCC
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          287 NLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       287 ~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      ++|+++|+|||++|||+|+++.                  +|+++.++++++|||||||||||++|||+|+++++
T Consensus        83 ~~i~~~~ikpGa~Vidvg~~~~------------------~~~~~~~~a~~~tPvpgGVGp~T~a~L~~n~~~~~  139 (140)
T cd05212          83 EKVPTEWIKPGATVINCSPTKL------------------SGDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSV  139 (140)
T ss_pred             CccCHHHcCCCCEEEEcCCCcc------------------cchhhHhhceEEcCCCCCchHHHHHHHHHHHHHhc
Confidence            9999999999999999998862                  14677788999999999999999999999999875

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=100.00  E-value=1.7e-34  Score=245.97  Aligned_cols=117  Identities=46%  Similarity=0.806  Sum_probs=103.4

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++|+||++|++|+++++++++.|+++ |++|+|++|+||+||+|..|+++|.|.|+++||+++.+.||++++++|+++.|
T Consensus         1 ~iL~Gk~va~~i~~~l~~~i~~l~~~-~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i   79 (117)
T PF00763_consen    1 KILDGKPVAKEIKEELKEEIEKLKEK-GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELI   79 (117)
T ss_dssp             EE--HHHHHHHHHHHHHHHHHHHHHC-T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHH
T ss_pred             CeeeHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHH
Confidence            48999999999999999999999988 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccC
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD  192 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVD  192 (368)
                      ++||+|++|||||||+|||+|+++.+++++|+|+||||
T Consensus        80 ~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVD  117 (117)
T PF00763_consen   80 EKLNEDPSVHGILVQLPLPKHIDERKILEAIDPEKDVD  117 (117)
T ss_dssp             HHHHH-TT-SEEEEESSSSTTSHHHHHHHTS-GGGBTT
T ss_pred             HHHhCCCCCCEEEEcCCCCCCccHHHHHhccCcccCCC
Confidence            99999999999999999999999999999999999998

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=99.89  E-value=2.3e-22  Score=194.92  Aligned_cols=224  Identities=17%  Similarity=0.154  Sum_probs=170.7

Q ss_pred             EEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCC
Q 017679          110 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG---CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVS  186 (368)
Q Consensus       110 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~  186 (368)
                      -++|+.-+-..-=.+++.+++++|+++.|..|+.+   +++++|.+.++.+.. .++.|++|++|++  ....++++.++
T Consensus         9 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~-~~~~G~nVTiP~K--~~v~~~~D~~~   85 (284)
T PRK12549          9 GLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAER-MGFAGLNITHPCK--QAVIPHLDELS   85 (284)
T ss_pred             EEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHh-cCCCEEEECcCCH--HHHHHHhccCC
Confidence            35676444344446899999999999999999643   347789999998875 4899999999998  44455666777


Q ss_pred             c-ccccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEE
Q 017679          187 L-EKDVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV  262 (368)
Q Consensus       187 p-~KDVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~  262 (368)
                      + .+.+.+++.+ + -|++. |+      +++..|+++.|++...++++|+|+|||+|++ |++++..|...|+ +|+++
T Consensus        86 ~~A~~iGAvNTv~~~~g~l~-G~------NTD~~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~I~I~  157 (284)
T PRK12549         86 DDARALGAVNTVVFRDGRRI-GH------NTDWSGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVERLTIF  157 (284)
T ss_pred             HHHHHhCCceEEEecCCEEE-EE------cCCHHHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEE
Confidence            7 6666665322 2 23443 54      4555999999998777899999999999997 9999999999997 89999


Q ss_pred             eCCCC----------------------CHhhhccCCCEEEEecCC-----CC-cccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          263 HALTK----------------------NPEQITSEADIVIAAAGV-----AN-LVRGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       263 h~~t~----------------------~L~~~~~~ADIVIsAvG~-----p~-~I~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      +|+..                      ++.+.++++|+||++|+.     +. .++.++++++.+|+|+.|+|.+     
T Consensus       158 nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~-----  232 (284)
T PRK12549        158 DVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLE-----  232 (284)
T ss_pred             CCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCC-----
Confidence            98631                      223356789999999742     22 3667889999999999999865     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                           ++|+     ..+ +..|+  ++-+|.+     ||++|.+.+++.|+|.
T Consensus       233 -----T~ll-----~~A-~~~G~--~~~~G~~-----ML~~Qa~~~f~~wtg~  267 (284)
T PRK12549        233 -----TELL-----RAA-RALGC--RTLDGGG-----MAVFQAVDAFELFTGR  267 (284)
T ss_pred             -----CHHH-----HHH-HHCCC--eEecCHH-----HHHHHHHHHHHHhcCC
Confidence                 3565     555 55676  5566676     9999999999999985

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=99.88  E-value=5.4e-22  Score=191.21  Aligned_cols=221  Identities=18%  Similarity=0.255  Sum_probs=169.5

Q ss_pred             EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679          111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK  189 (368)
Q Consensus       111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K  189 (368)
                      ++|+.-+-..-=.+++.+++++|+++.|..|.  +.+++|.+.++.+... ++.|++|++|++  .+..++++.++| .+
T Consensus        10 viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K--~~~~~~~d~~~~~A~   84 (278)
T PRK00258         10 VIGNPIAHSKSPLIHNAAFKQLGLDGVYLAIL--VPPEDLEDAVKGFFAL-GGRGANVTVPFK--EAAFALADELSERAR   84 (278)
T ss_pred             EECCchhcccCHHHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhC-CCCEEEECcCCH--HHHHHHhhcCCHHHH
Confidence            36743322233358899999999999999984  4678899999999875 799999999998  455667777777 67


Q ss_pred             ccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHH-hCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCC
Q 017679          190 DVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHAL  265 (368)
Q Consensus       190 DVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~-~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~  265 (368)
                      .+..++.+ + -|++. |+      +++..|++..|++ .+.++++|+|+|+|+|++ |+.++..|...| ++|++++|+
T Consensus        85 ~igavNtv~~~~g~l~-G~------NTD~~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R~  156 (278)
T PRK00258         85 LIGAVNTLVLEDGRLI-GD------NTDGIGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNRT  156 (278)
T ss_pred             HhCCceEEEeeCCEEE-EE------cccHHHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeCC
Confidence            76665333 3 23332 54      5556999999986 578899999999999987 999999999999 699999986


Q ss_pred             CCC-------------------HhhhccCCCEEEEecCCCC-------cccCCCcCCCcEEEEeecCCCCCCCCCCCCCC
Q 017679          266 TKN-------------------PEQITSEADIVIAAAGVAN-------LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG  319 (368)
Q Consensus       266 t~~-------------------L~~~~~~ADIVIsAvG~p~-------~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~  319 (368)
                      ...                   +.+.+.++|+||++|+...       .+..++++++.+|+|+.|+|.+          
T Consensus       157 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~----------  226 (278)
T PRK00258        157 VERAEELAKLFGALGKAELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLP----------  226 (278)
T ss_pred             HHHHHHHHHHhhhccceeecccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCC----------
Confidence            421                   1234477999999997432       2455788999999999999864          


Q ss_pred             cEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          320 YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       320 ~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      +.|.     +.| ++.|+  ++-+|.+     ||++|.+.+++.|+|.
T Consensus       227 T~ll-----~~A-~~~G~--~~~~G~~-----Ml~~Qa~~~f~~wtg~  261 (278)
T PRK00258        227 TPFL-----AWA-KAQGA--RTIDGLG-----MLVHQAAEAFELWTGV  261 (278)
T ss_pred             CHHH-----HHH-HHCcC--eecCCHH-----HHHHHHHHHHHHHcCC
Confidence            2455     555 66776  6667777     9999999999999985

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=99.88  E-value=6.2e-22  Score=192.10  Aligned_cols=222  Identities=22%  Similarity=0.267  Sum_probs=168.8

Q ss_pred             EEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679          110 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E  188 (368)
Q Consensus       110 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~  188 (368)
                      -++|+.-+...-=.+++.+++++|+++.|..|+  +.+++|.+.++.+.. .++.|++|++|++  ....++++.++| .
T Consensus        13 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K--~~v~~~ld~~~~~A   87 (289)
T PRK12548         13 GLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFD--IPVDKVPDAIKAIKT-FNMRGANVTMPCK--SEAAKYMDELSPAA   87 (289)
T ss_pred             EEEcCCcccccCHHHHHHHHHHcCCCEEEEEEe--cCHHHHHHHHHHHHH-CCCCEEEECccCH--HHHHHHhhcCCHHH
Confidence            346764333333358999999999999999995  467889999999876 4799999999998  445666777777 5


Q ss_pred             cccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCC
Q 017679          189 KDVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL  265 (368)
Q Consensus       189 KDVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~  265 (368)
                      +-+.+++.+ + -|++. |++      ++..|+++.|++++.+++||+++|+|+|++ |++++..|...|++ |++++|+
T Consensus        88 ~~iGavNTi~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R~  159 (289)
T PRK12548         88 RIIGAVNTIVNDDGKLT-GHI------TDGLGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNIK  159 (289)
T ss_pred             HHhCceeEEEeECCEEE-EEe------cCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence            665555322 2 24443 544      455999999999988999999999999997 99999999999985 9999986


Q ss_pred             C---CC---------------------------HhhhccCCCEEEEecC---CCC----cc-cCCCcCCCcEEEEeecCC
Q 017679          266 T---KN---------------------------PEQITSEADIVIAAAG---VAN----LV-RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       266 t---~~---------------------------L~~~~~~ADIVIsAvG---~p~----~I-~~e~ik~gavVIDvg~n~  307 (368)
                      .   ..                           +.+.+..+|+||++|+   .|+    .+ ..+++.++.+|+|+.|+|
T Consensus       160 ~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P  239 (289)
T PRK12548        160 DDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNP  239 (289)
T ss_pred             chHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCC
Confidence            3   10                           1123356899998885   232    24 456789999999999999


Q ss_pred             CCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          308 VDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       308 ~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      .+          ++|+     ..+ +..|+  ++-+|.+     ||++|.+++++.|+|.
T Consensus       240 ~~----------T~ll-----~~A-~~~G~--~~~~G~~-----ML~~Qa~~~f~lwtg~  276 (289)
T PRK12548        240 KK----------TKLL-----EDA-EAAGC--KTVGGLG-----MLLWQGAEAYKLYTGK  276 (289)
T ss_pred             CC----------CHHH-----HHH-HHCCC--eeeCcHH-----HHHHHHHHHHHHhcCC
Confidence            75          3566     555 55676  6667777     9999999999999985

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=99.87  E-value=8.5e-22  Score=191.48  Aligned_cols=221  Identities=21%  Similarity=0.214  Sum_probs=166.9

Q ss_pred             EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679          111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK  189 (368)
Q Consensus       111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K  189 (368)
                      ++|+.-+-..-=.+++.+++++|+++.|..++  +.+++|.+.++.+... ++.|++|++|++  ....++++.+++ .+
T Consensus        12 liG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~l~~~-~~~G~nVTiP~K--~~~~~~~D~l~~~A~   86 (288)
T PRK12749         12 LMAYPIRHSLSPEMQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKAL-KMRGTGVSMPNK--QLACEYVDELTPAAK   86 (288)
T ss_pred             EECCCcccccCHHHHHHHHHHcCCCeEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCH--HHHHHHhccCCHHHH
Confidence            46754333333468999999999999999985  4778899999998764 799999999998  444566677777 66


Q ss_pred             ccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679          190 DVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT  266 (368)
Q Consensus       190 DVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t  266 (368)
                      .+.+++.+ + -|++. |+      +++..|+++.|++.+++++||+++|+|+|++ +|+++..|...|+ +|+|++|+.
T Consensus        87 ~iGAVNTv~~~~g~l~-G~------NTD~~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749         87 LVGAINTIVNDDGYLR-GY------NTDGTGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             HhCceeEEEccCCEEE-EE------ecCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCc
Confidence            66655322 1 34443 54      5555999999999999999999999999998 9999999999996 899999973


Q ss_pred             C------C-----------------H------hhhccCCCEEEEecCC---CC----c-ccCCCcCCCcEEEEeecCCCC
Q 017679          267 K------N-----------------P------EQITSEADIVIAAAGV---AN----L-VRGSWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       267 ~------~-----------------L------~~~~~~ADIVIsAvG~---p~----~-I~~e~ik~gavVIDvg~n~~~  309 (368)
                      .      +                 +      .+.+.++|+||++|+.   |+    + +..+.++++.+|+|+.|+|.+
T Consensus       159 ~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~  238 (288)
T PRK12749        159 EFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM  238 (288)
T ss_pred             cHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCcc
Confidence            1      0                 1      1134578999998863   32    1 234567889999999999875


Q ss_pred             CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                                ++|+     ..+ +..|+  ++-+|.+     ||++|.+++++.|+|.
T Consensus       239 ----------T~ll-----~~A-~~~G~--~~~~Gl~-----ML~~Qa~~~f~lwtg~  273 (288)
T PRK12749        239 ----------TKLL-----QQA-QQAGC--KTIDGYG-----MLLWQGAEQFTLWTGK  273 (288)
T ss_pred             ----------CHHH-----HHH-HHCCC--eEECCHH-----HHHHHHHHHHHHhcCC
Confidence                      3566     555 55676  4556666     9999999999999985

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=99.87  E-value=8.4e-22  Score=191.05  Aligned_cols=219  Identities=22%  Similarity=0.320  Sum_probs=168.3

Q ss_pred             eCC-CcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679          112 VGE-RRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK  189 (368)
Q Consensus       112 vG~-d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K  189 (368)
                      +|+ -+-|.+ -.+++.+++++|+++.|..+..  ..++|.+.|+.+. +..+.|++|++|++  ....++++.+++ .+
T Consensus        12 iG~Pi~HS~S-P~~Hn~~~~~lGl~~~Y~a~~v--~~~~l~~~v~~~~-~~g~~G~NVTiP~K--e~~~~~lD~l~~~A~   85 (283)
T COG0169          12 IGNPISHSLS-PRMHNAAFRALGLDYVYLAFEV--PPEDLPEAVSGIR-ALGFRGLNVTIPFK--EAALPLLDELSPRAR   85 (283)
T ss_pred             EcCCcccCcC-HHHHHHHHHHcCCCceEEEeec--CHHHHHHHHHHHH-hcCCCeeEECCccH--HHHHHHHhcCCHHHH
Confidence            455 333433 3689999999999999999955  6889999999998 57899999999998  445667777777 56


Q ss_pred             ccCcc-Cccee--eeccccCCcCccccCCHHHHHHHHHHhC--CCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEe
Q 017679          190 DVDGF-HPLNI--GNLAMRGREPLFIPCTPKGCIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH  263 (368)
Q Consensus       190 DVDgl-~~~N~--G~L~~g~~~~~~~PcTa~gv~~lL~~~~--i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h  263 (368)
                      -+..+ |.++.  |++. |+++++      .|+.+.|++++  .+.+|++|+|+|+||+ +|+++..|++.|+ +|+|++
T Consensus        86 ~iGAVNTl~~~~~g~l~-G~NTD~------~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~N  157 (283)
T COG0169          86 LIGAVNTLVREDDGKLR-GYNTDG------IGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVVN  157 (283)
T ss_pred             HhCCceEEEEccCCEEE-EEcCCH------HHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEe
Confidence            65555 33333  4554 655554      99999999987  5677999999999999 9999999999995 899999


Q ss_pred             CCCCC---H----------------h--hhccCCCEEEEecCC---CC----cccCCCcCCCcEEEEeecCCCCCCCCCC
Q 017679          264 ALTKN---P----------------E--QITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVDVSVDPS  315 (368)
Q Consensus       264 ~~t~~---L----------------~--~~~~~ADIVIsAvG~---p~----~I~~e~ik~gavVIDvg~n~~~~~~d~t  315 (368)
                      |+...   |                .  +...++|+||++|+.   ++    ++..+.++++.+|+|+.|+|.+      
T Consensus       158 Rt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~------  231 (283)
T COG0169         158 RTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLE------  231 (283)
T ss_pred             CCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCC------
Confidence            97421   1                1  111159999999962   22    3556889999999999999976      


Q ss_pred             CCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       316 ~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                          ++|+     +.| +..|+.  +-.|.|     ||++|.+++++.|+|.
T Consensus       232 ----TplL-----~~A-~~~G~~--~idGl~-----Mlv~Qaa~aF~lwtg~  266 (283)
T COG0169         232 ----TPLL-----REA-RAQGAK--TIDGLG-----MLVHQAAEAFELWTGV  266 (283)
T ss_pred             ----CHHH-----HHH-HHcCCe--EECcHH-----HHHHHHHHHHHHHhCC
Confidence                3666     666 445654  345666     9999999999999986

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=99.87  E-value=1.3e-21  Score=188.84  Aligned_cols=225  Identities=17%  Similarity=0.180  Sum_probs=170.8

Q ss_pred             CCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHH
Q 017679          102 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI  181 (368)
Q Consensus       102 g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~i  181 (368)
                      +..++|..=++|+. -|.+-. +++.+++++|+++.|..|+    .++|.+.++.+.. .++.|++|++|++  ....++
T Consensus         6 ~~~~~~~~gliG~P-~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~-~~~~G~nVT~P~K--~~~~~~   76 (272)
T PRK12550          6 NKDTQLCISLAARP-SNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRA-LGIRGCAVSMPFK--EAVIPL   76 (272)
T ss_pred             CCCceEEEEEEccc-hhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHh-cCCCEEEECcCCH--HHHHHH
Confidence            45567655567854 667765 9999999999999999995    3678888888876 3799999999998  444667


Q ss_pred             HhcCCc-ccccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-
Q 017679          182 LDAVSL-EKDVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-  257 (368)
Q Consensus       182 l~~I~p-~KDVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-  257 (368)
                      ++.++| .+.+.+++.+ + -|++. |+      +++..|+++.|++++.+ .+|+|+|+|+|++ +|+++..|.+.|+ 
T Consensus        77 lD~l~~~A~~iGAVNTi~~~~g~l~-G~------NTD~~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~~~g~~  147 (272)
T PRK12550         77 VDELDPSAQAIESVNTIVNTDGHLK-AY------NTDYIAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALRDAGFT  147 (272)
T ss_pred             hhcCCHHHHHhCCeeEEEeeCCEEE-EE------ecCHHHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHHHCCCC
Confidence            777777 6666655322 2 23332 44      55559999999988875 4789999999998 9999999999997 


Q ss_pred             EEEEEeCCCCC---Hh--------hh--ccCCCEEEEecCC---CC------cccCCCcCCCcEEEEeecCCCCCCCCCC
Q 017679          258 TVSIVHALTKN---PE--------QI--TSEADIVIAAAGV---AN------LVRGSWLKPGAVVLDVGTCPVDVSVDPS  315 (368)
Q Consensus       258 tVti~h~~t~~---L~--------~~--~~~ADIVIsAvG~---p~------~I~~e~ik~gavVIDvg~n~~~~~~d~t  315 (368)
                      +|+|++|+...   +.        +.  ...+|+||+||+.   ++      .++.++++++.+|+|+.|+|.+      
T Consensus       148 ~i~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~------  221 (272)
T PRK12550        148 DGTIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAE------  221 (272)
T ss_pred             EEEEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCcc------
Confidence            69999997421   11        11  1458999999862   21      2667789999999999999865      


Q ss_pred             CCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       316 ~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                          ++|.     ..+ +..|+  ++-+|.+     ||++|.+++++.|+|.
T Consensus       222 ----T~ll-----~~A-~~~G~--~~i~Gl~-----MLi~Qa~~~f~lwtg~  256 (272)
T PRK12550        222 ----TPLI-----RYA-RARGK--TVITGAE-----VIALQAVEQFVLYTGV  256 (272)
T ss_pred             ----CHHH-----HHH-HHCcC--eEeCCHH-----HHHHHHHHHHHHHhCC
Confidence                3566     555 55676  5566777     9999999999999985

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=99.87  E-value=1.8e-21  Score=188.34  Aligned_cols=223  Identities=16%  Similarity=0.191  Sum_probs=165.6

Q ss_pred             EEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-
Q 017679          109 VILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-  187 (368)
Q Consensus       109 iI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-  187 (368)
                      .-++|+.-+...-=.+++.+++++|+++.|..++.. +.++|.+.++.+..  ++.|++|++|++  ....++++.+++ 
T Consensus         8 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~-~~~~l~~~~~~~~~--~~~G~nVT~P~K--~~~~~~~d~~~~~   82 (282)
T TIGR01809         8 AFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETC-SAEELKEVLSGFGP--QFGGASVTIPLK--FAILRFADEHTDR   82 (282)
T ss_pred             EEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeecC-CHHHHHHHHHhcCC--CCcEEEECCCCH--HHHHHHhhcCCHH
Confidence            345775433333346899999999999999999642 35789999998843  799999999998  445566777777 


Q ss_pred             ccccCccCcc-e--eeeccccCCcCccccCCHHHHHHHHHHhCC--CCccceEEEEccCccchHHHHHHHhhCCC-EEEE
Q 017679          188 EKDVDGFHPL-N--IGNLAMRGREPLFIPCTPKGCIELLIRSGV--EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSI  261 (368)
Q Consensus       188 ~KDVDgl~~~-N--~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i--~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti  261 (368)
                      .|-+.+++.+ +  -|++. |++      ++..|+++.|++.+.  +++||+|+|||+|++ ||+++..|...|+ +|+|
T Consensus        83 A~~iGAVNTv~~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~i~I  154 (282)
T TIGR01809        83 ASLIGSVNTLLRTQNGIWK-GDN------TDWDGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTDITV  154 (282)
T ss_pred             HHHhCceeEEEEcCCCcEE-Eec------CCHHHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCeEEE
Confidence            6666655332 2  13343 544      455999999998874  689999999999998 9999999999997 7999


Q ss_pred             EeCCCC----------------------CHhhhccCCCEEEEecCCCCcccCCC------------cCCCcEEEEeecCC
Q 017679          262 VHALTK----------------------NPEQITSEADIVIAAAGVANLVRGSW------------LKPGAVVLDVGTCP  307 (368)
Q Consensus       262 ~h~~t~----------------------~L~~~~~~ADIVIsAvG~p~~I~~e~------------ik~gavVIDvg~n~  307 (368)
                      ++|+..                      ++.+.+.++|+||++|+....++.+.            +.++.+|+|+.|+|
T Consensus       155 ~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P  234 (282)
T TIGR01809       155 INRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDP  234 (282)
T ss_pred             EeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCC
Confidence            998631                      11233577899999998654443322            34678999999998


Q ss_pred             CCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          308 VDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       308 ~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      .+          +.|+     ..+ +.+|+  ++-+|.+     ||++|.+.+++.|+|.
T Consensus       235 ~~----------T~ll-----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~  271 (282)
T TIGR01809       235 WP----------TPLV-----AIV-SAAGW--RVISGLQ-----MLLHQGFAQFEQWTGM  271 (282)
T ss_pred             CC----------CHHH-----HHH-HHCCC--EEECcHH-----HHHHHHHHHHHHHHCC
Confidence            65          2455     444 55776  5556776     9999999999999985

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=99.86  E-value=2e-21  Score=188.52  Aligned_cols=223  Identities=17%  Similarity=0.174  Sum_probs=169.5

Q ss_pred             EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc
Q 017679          111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG---CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL  187 (368)
Q Consensus       111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p  187 (368)
                      ++|+.-+....=.+++.+++++|+++.|..|+..   +++++|.+.++.+... ++.|++|++|++  ....++++.+++
T Consensus         9 liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~-~~~G~nVT~P~K--~~~~~~lD~l~~   85 (283)
T PRK14027          9 LIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYL-GFNGLNITHPYK--QAVLPLLDEVSE   85 (283)
T ss_pred             EECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhc-CCCEEEECccCH--HHHHHHhhhCCH
Confidence            3565433333346899999999999999999643   3467888999988764 899999999998  455667777877


Q ss_pred             -ccccCccCcc-e--eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEE
Q 017679          188 -EKDVDGFHPL-N--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV  262 (368)
Q Consensus       188 -~KDVDgl~~~-N--~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~  262 (368)
                       .+.+..++.+ +  -|++. |+++++      .|+++.|++.+.+++||+|+|+|+||+ ||+++..|...|+ +|+|+
T Consensus        86 ~A~~iGAVNTv~~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i~  157 (283)
T PRK14027         86 QATQLGAVNTVVIDATGHTT-GHNTDV------SGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVA  157 (283)
T ss_pred             HHHHhCCceEEEECCCCcEE-EEcCCH------HHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEEE
Confidence             7777666433 2  34443 655555      999999998767789999999999998 9999999999996 89999


Q ss_pred             eCCCC---CH---------------------hhhccCCCEEEEecCC---CC---cccCCCcCCCcEEEEeecCCCCCCC
Q 017679          263 HALTK---NP---------------------EQITSEADIVIAAAGV---AN---LVRGSWLKPGAVVLDVGTCPVDVSV  312 (368)
Q Consensus       263 h~~t~---~L---------------------~~~~~~ADIVIsAvG~---p~---~I~~e~ik~gavVIDvg~n~~~~~~  312 (368)
                      +|+..   .|                     .+.+.++|+||++|+.   ++   .++.+.+.++.+|+|+.|+|.+   
T Consensus       158 nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~---  234 (283)
T PRK14027        158 DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIE---  234 (283)
T ss_pred             cCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCC---
Confidence            98631   11                     1234578999988862   21   2555678889999999999965   


Q ss_pred             CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                             ++|+     ..+ +..|+  ++-+|.+     ||++|.+++++.|+|.
T Consensus       235 -------T~ll-----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~~f~lw~G~  269 (283)
T PRK14027        235 -------TELL-----KAA-RALGC--ETLDGTR-----MAIHQAVDAFRLFTGL  269 (283)
T ss_pred             -------CHHH-----HHH-HHCCC--EEEccHH-----HHHHHHHHHHHHHhCC
Confidence                   3566     555 55676  5556777     9999999999999985

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=99.86  E-value=5.6e-21  Score=183.19  Aligned_cols=220  Identities=20%  Similarity=0.220  Sum_probs=165.7

Q ss_pred             eCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccc
Q 017679          112 VGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKD  190 (368)
Q Consensus       112 vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KD  190 (368)
                      +|+.-+-..-=.+++.+++++|+++.|..|+  +.+++|.+.++.+... ++.|++|++|++  .+..++++.+++ .+-
T Consensus         6 iG~pi~hS~SP~~hn~~~~~~g~~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K--~~~~~~~d~~~~~A~~   80 (270)
T TIGR00507         6 IGNPIAHSKSPLIHNAFFKQLGLEGPYIAFL--VPPDDLEDALSGFFAL-GFKGANVTSPFK--EEAFQFLDEIDERAKL   80 (270)
T ss_pred             ECCccccccCHHHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCH--HHHHHHhhhCCHHHHH
Confidence            4543332333368999999999999999985  4677899999999764 799999999998  445667777777 666


Q ss_pred             cCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC
Q 017679          191 VDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN  268 (368)
Q Consensus       191 VDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~  268 (368)
                      +.+++.+ + -|++. |+      +++..|+++.|++.+...++|+++|+|+|++ |++++..|.+.|+.|++++|+...
T Consensus        81 ~gavNti~~~~g~l~-g~------NTD~~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~~~  152 (270)
T TIGR00507        81 AGAVNTLKLEDGKLV-GY------NTDGIGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTVSK  152 (270)
T ss_pred             hCCceEEEeeCCEEE-EE------cCCHHHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHH
Confidence            6665333 2 23333 44      5566999999998777788999999999976 999999999999999999886321


Q ss_pred             H------------------hh-hccCCCEEEEecCCC---C----cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEE
Q 017679          269 P------------------EQ-ITSEADIVIAAAGVA---N----LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRL  322 (368)
Q Consensus       269 L------------------~~-~~~~ADIVIsAvG~p---~----~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl  322 (368)
                      .                  .+ ...++|+||++++..   .    .+..++++++.+|+|+.|+|.+          +.|
T Consensus       153 ~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~----------T~l  222 (270)
T TIGR00507       153 AEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGE----------TPF  222 (270)
T ss_pred             HHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCC----------CHH
Confidence            1                  11 225789999999852   2    2345678999999999999865          234


Q ss_pred             EcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          323 MGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       323 ~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      .     +.+ +..|+  ++-.|.+     ||++|.+.+++.|+|.
T Consensus       223 l-----~~A-~~~G~--~~vdG~~-----Ml~~Qa~~~f~~w~g~  254 (270)
T TIGR00507       223 L-----AEA-KSLGT--KTIDGLG-----MLVAQAALAFELWTGV  254 (270)
T ss_pred             H-----HHH-HHCCC--eeeCCHH-----HHHHHHHHHHHHHcCC
Confidence            3     444 55675  5556676     9999999999999985

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=99.80  E-value=5.5e-19  Score=184.63  Aligned_cols=220  Identities=21%  Similarity=0.267  Sum_probs=165.2

Q ss_pred             EEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679          110 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E  188 (368)
Q Consensus       110 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~  188 (368)
                      -++|+.-+-..-=.+++.+++++|+++.|..|+.    ++|.+.++.++. .++.|++|++|++  ....++++.++| .
T Consensus       256 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v----~~l~~~~~~l~~-~~~~G~nVTiP~K--~~v~~~lD~~~~~A  328 (529)
T PLN02520        256 GIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLV----DDLAKFLQTYSS-PDFAGFSCTIPHK--EDALKCCDEVDPIA  328 (529)
T ss_pred             EEEcCCcccccCHHHHHHHHHHCCCCcEEEEeeh----hhHHHHHHHHhh-CCCCEEEECcCCH--HHHHHHhccCCHHH
Confidence            3678643333333689999999999999999964    467777777765 5799999999998  445667777877 7


Q ss_pred             cccCccCcc-e---eeeccccCCcCccccCCHHHHHHHHHHh----------CCCCccceEEEEccCccchHHHHHHHhh
Q 017679          189 KDVDGFHPL-N---IGNLAMRGREPLFIPCTPKGCIELLIRS----------GVEIMGKNAVVIGRSNIVGLPTSLLLQR  254 (368)
Q Consensus       189 KDVDgl~~~-N---~G~L~~g~~~~~~~PcTa~gv~~lL~~~----------~i~l~GK~VvVIG~g~~VGrpla~lL~~  254 (368)
                      +.+.+++.+ +   -|++. |+++      +..|+++.|++.          +.+++||+|+|+|+|++ |++++..|.+
T Consensus       329 ~~iGAVNTvv~~~~~g~l~-G~NT------D~~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~~  400 (529)
T PLN02520        329 KSIGAINTIIRRPSDGKLV-GYNT------DYIGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAKE  400 (529)
T ss_pred             HHhCCceEEEEeCCCCEEE-EEcc------cHHHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHHH
Confidence            777776433 3   24543 5544      459999999752          56789999999999987 9999999999


Q ss_pred             CCCEEEEEeCCCCC---H--------------hhh-ccCCCEEEEecCC---CC----cccCCCcCCCcEEEEeecCCCC
Q 017679          255 HHATVSIVHALTKN---P--------------EQI-TSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       255 ~gAtVti~h~~t~~---L--------------~~~-~~~ADIVIsAvG~---p~----~I~~e~ik~gavVIDvg~n~~~  309 (368)
                      +|++|++++|+...   +              .+. ...+|+||++++.   |+    .++.++++++.+|+|+.|+|.+
T Consensus       401 ~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~  480 (529)
T PLN02520        401 KGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKI  480 (529)
T ss_pred             CCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCc
Confidence            99999999886321   1              111 1357899987752   32    2566788999999999999975


Q ss_pred             CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                                +.|+     ..| +.+|+  ++-+|.+     ||++|.+.+++.|+|.
T Consensus       481 ----------T~ll-----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~  515 (529)
T PLN02520        481 ----------TRLL-----REA-EESGA--IIVSGTE-----MFIRQAYEQFERFTGL  515 (529)
T ss_pred             ----------CHHH-----HHH-HHCCC--eEeCcHH-----HHHHHHHHHHHHHhCC
Confidence                      3566     555 55776  5556666     9999999999999985

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=99.78  E-value=1e-18  Score=180.55  Aligned_cols=218  Identities=17%  Similarity=0.183  Sum_probs=163.5

Q ss_pred             EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679          111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK  189 (368)
Q Consensus       111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K  189 (368)
                      ++|+.-+-..-=.+++.+++++|+++.|..|+.  .+++|.+.++.+.. .++.|++|++|++  .....+++.+++ .+
T Consensus       220 liG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVT~P~K--~~v~~~~d~~~~~A~  294 (477)
T PRK09310        220 LIGDPVDRSISHLSHNPLFSQLSLNCPYIKLPL--TPQELPKFFSTIRD-LPFLGLSVTMPLK--TAVLDFLDKLDPSVK  294 (477)
T ss_pred             EECCCcccccCHHHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHHh-CCCCEEEECccCH--HHHHHHhccCCHHHH
Confidence            578654333334589999999999999999954  66788888888866 4799999999998  455667777777 67


Q ss_pred             ccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          190 DVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       190 DVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      -+.+++.+ + -|++. |++      ++..|+++.|++.+.+++||+++|+|+|++ |++++..|.+.|++|++++++..
T Consensus       295 ~iGAVNTv~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~~~  366 (477)
T PRK09310        295 LCGSCNTLVFRNGKIE-GYN------TDGEGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRTKA  366 (477)
T ss_pred             HhCcceEEEeeCCEEE-EEe------cCHHHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHH
Confidence            76666433 2 34443 554      455999999999999999999999999986 99999999999999999987632


Q ss_pred             CHh--------------h--hccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhh
Q 017679          268 NPE--------------Q--ITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEA  331 (368)
Q Consensus       268 ~L~--------------~--~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~  331 (368)
                      ..+              +  .+.++|+||++++....+.. .+.  .+|+|+.|+|.+          +.|.     ..+
T Consensus       367 ~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~~~~~-~l~--~~v~D~~Y~P~~----------T~ll-----~~A  428 (477)
T PRK09310        367 HAEALASRCQGKAFPLESLPELHRIDIIINCLPPSVTIPK-AFP--PCVVDINTLPKH----------SPYT-----QYA  428 (477)
T ss_pred             HHHHHHHHhccceechhHhcccCCCCEEEEcCCCCCcchh-HHh--hhEEeccCCCCC----------CHHH-----HHH
Confidence            111              1  14678999999975433432 333  389999999865          2344     444


Q ss_pred             hccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          332 MRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       332 ~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                       +..|+  ++-+|.+     ||+.|.+.+++.|+|.
T Consensus       429 -~~~G~--~~~~G~~-----Ml~~Qa~~~f~lw~g~  456 (477)
T PRK09310        429 -RSQGS--SIIYGYE-----MFAEQALLQFRLWFPT  456 (477)
T ss_pred             -HHCcC--EEECcHH-----HHHHHHHHHHHHHcCC
Confidence             55676  4556676     9999999999999985

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=99.59  E-value=5.2e-15  Score=144.42  Aligned_cols=130  Identities=22%  Similarity=0.362  Sum_probs=105.7

Q ss_pred             CHHH-HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------------CHhhhccCCC
Q 017679          215 TPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSEAD  277 (368)
Q Consensus       215 Ta~g-v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------~L~~~~~~AD  277 (368)
                      |+.+ +.+.++++++++.|++|+|||.|.+ |++++..|.+.|++|++++++..                ++.+.++++|
T Consensus       134 ~aegav~~a~~~~~~~l~g~kvlViG~G~i-G~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aD  212 (296)
T PRK08306        134 TAEGAIMMAIEHTPITIHGSNVLVLGFGRT-GMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKID  212 (296)
T ss_pred             HHHHHHHHHHHhCCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCC
Confidence            4444 5566788889999999999999985 99999999999999999998742                4567789999


Q ss_pred             EEEEecCCCCcccCCC---cCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHH
Q 017679          278 IVIAAAGVANLVRGSW---LKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVA  351 (368)
Q Consensus       278 IVIsAvG~p~~I~~e~---ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~a  351 (368)
                      +||++++.+ .++.++   +++|++|||+++++                |++||+.+++.   +.+.+++||+|+|+|.+
T Consensus       213 iVI~t~p~~-~i~~~~l~~~~~g~vIIDla~~p----------------ggtd~~~a~~~Gv~~~~~~~lpg~vap~ta~  275 (296)
T PRK08306        213 IIFNTIPAL-VLTKEVLSKMPPEALIIDLASKP----------------GGTDFEYAEKRGIKALLAPGLPGKVAPKTAG  275 (296)
T ss_pred             EEEECCChh-hhhHHHHHcCCCCcEEEEEccCC----------------CCcCeeehhhCCeEEEEECCCCccCCHHHHH
Confidence            999998642 456554   68999999999875                45777666443   55558999999999999


Q ss_pred             HHHHHHHHHHH
Q 017679          352 MLLSNTLDSAK  362 (368)
Q Consensus       352 mLl~N~v~a~~  362 (368)
                      .++.|.+..+-
T Consensus       276 ~~~~~~i~~~l  286 (296)
T PRK08306        276 QILANVLSQLL  286 (296)
T ss_pred             HHHHHHHHHHH
Confidence            99999987764

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=99.52  E-value=5.7e-14  Score=136.69  Aligned_cols=130  Identities=25%  Similarity=0.381  Sum_probs=101.7

Q ss_pred             CCHHHH-HHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------------CHhhhccCC
Q 017679          214 CTPKGC-IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSEA  276 (368)
Q Consensus       214 cTa~gv-~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------~L~~~~~~A  276 (368)
                      +|+.+. ...++.++++++||+++|+|.|++ |+.++..|...|++|++++|+..                ++.+.++++
T Consensus       132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~a  210 (287)
T TIGR02853       132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEI  210 (287)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccC
Confidence            455654 455677788999999999999996 99999999999999999988642                345678999


Q ss_pred             CEEEEecCCCCcccCC---CcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc--ceEecc-CCCcccHHHH
Q 017679          277 DIVIAAAGVANLVRGS---WLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL--ASVITP-VPGGVGPMTV  350 (368)
Q Consensus       277 DIVIsAvG~p~~I~~e---~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~--a~~iTP-VPGGVGp~T~  350 (368)
                      |+||++++.+ +++.+   .+++++++||++++|                |.+||+.+++.  -....| .||.|+|+|.
T Consensus       211 DiVint~P~~-ii~~~~l~~~k~~aliIDlas~P----------------g~tdf~~Ak~~G~~a~~~~glPg~~ap~ta  273 (287)
T TIGR02853       211 DIVINTIPAL-VLTADVLSKLPKHAVIIDLASKP----------------GGTDFEYAKKRGIKALLAPGLPGIVAPKTA  273 (287)
T ss_pred             CEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCC----------------CCCCHHHHHHCCCEEEEeCCCCcccCchhH
Confidence            9999998653 34443   478899999999976                55678666442  122235 8999999999


Q ss_pred             HHHHHHHHHHH
Q 017679          351 AMLLSNTLDSA  361 (368)
Q Consensus       351 amLl~N~v~a~  361 (368)
                      +.++.|++...
T Consensus       274 ~~i~~~~~~~~  284 (287)
T TIGR02853       274 GKILANVLSEL  284 (287)
T ss_pred             HHHHHHHHHHH
Confidence            99999998653

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=99.16  E-value=2.3e-11  Score=105.57  Aligned_cols=87  Identities=25%  Similarity=0.271  Sum_probs=70.5

Q ss_pred             HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC--------------------CCHhhhccCCCEEE
Q 017679          222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT--------------------KNPEQITSEADIVI  280 (368)
Q Consensus       222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t--------------------~~L~~~~~~ADIVI  280 (368)
                      +.++...+++||+++|||+|++ |++++..|..+|++ |++++|+.                    .++.+.+.++|+||
T Consensus         2 la~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI   80 (135)
T PF01488_consen    2 LAKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVI   80 (135)
T ss_dssp             HHCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEE
T ss_pred             hhHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEE
Confidence            4445556899999999999998 99999999999985 99999973                    24556788999999


Q ss_pred             EecCCCCc-ccCCCcCCC----cEEEEeecCCCC
Q 017679          281 AAAGVANL-VRGSWLKPG----AVVLDVGTCPVD  309 (368)
Q Consensus       281 sAvG~p~~-I~~e~ik~g----avVIDvg~n~~~  309 (368)
                      +||+.++. ++.+++++.    .+|+|+++++.-
T Consensus        81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~i  114 (135)
T PF01488_consen   81 NATPSGMPIITEEMLKKASKKLRLVIDLAVPRDI  114 (135)
T ss_dssp             E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-SB
T ss_pred             EecCCCCcccCHHHHHHHHhhhhceeccccCCCC
Confidence            99998875 799999887    499999987653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=99.14  E-value=4e-11  Score=121.88  Aligned_cols=155  Identities=19%  Similarity=0.267  Sum_probs=120.3

Q ss_pred             HcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc
Q 017679          131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL  210 (368)
Q Consensus       131 ~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~  210 (368)
                      ..|+++-.+      .|.|++.+++..-.-..=.|..      ...-..-..++|.-.|-|..-|.+|.|....      
T Consensus       100 AsGLDSmVl------GE~QILGQVK~Ay~~a~~~g~~------g~~L~~lFqkAi~~gKrvRseT~I~~~~VSi------  161 (414)
T COG0373         100 ASGLDSLVL------GETQILGQVKDAYAKAQENGTL------GKVLNRLFQKAISVGKRVRSETGIGKGAVSI------  161 (414)
T ss_pred             hccchhhhc------CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHhhcccCCCCCccch------
Confidence            468877544      5677777777654332212221      1122234556888899999888888776654      


Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC-----------------CCHhhh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT-----------------KNPEQI  272 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t-----------------~~L~~~  272 (368)
                           +.+++++.++...+|++|+|+|||+|.+ |..+|..|.++| ..|+|+||+-                 .++.++
T Consensus       162 -----~saAv~lA~~~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~  235 (414)
T COG0373         162 -----SSAAVELAKRIFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEA  235 (414)
T ss_pred             -----HHHHHHHHHHHhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHh
Confidence                 3899999999999999999999999997 999999999999 5899999973                 367789


Q ss_pred             ccCCCEEEEecCCCCc-ccCCCcCCC------cEEEEeecCCCC
Q 017679          273 TSEADIVIAAAGVANL-VRGSWLKPG------AVVLDVGTCPVD  309 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~-I~~e~ik~g------avVIDvg~n~~~  309 (368)
                      +.+|||||++||.|++ |+.+++...      .++||++.+|+-
T Consensus       236 l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdi  279 (414)
T COG0373         236 LAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDV  279 (414)
T ss_pred             hhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCC
Confidence            9999999999999998 688887543      589999999864

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=99.08  E-value=3.3e-10  Score=90.93  Aligned_cols=78  Identities=29%  Similarity=0.460  Sum_probs=68.1

Q ss_pred             CCHHHHHHHHHHhC----CCCccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCc
Q 017679          214 CTPKGCIELLIRSG----VEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTKNPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       214 cTa~gv~~lL~~~~----i~l~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      ||+.++++.|++..    .++++|+++|+|+|.. |++++.+|.+. +.+|+++++            |++|+++|.+++
T Consensus         1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~~-g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~   67 (86)
T cd05191           1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGEV-GKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP   67 (86)
T ss_pred             ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence            78899888887654    4599999999999775 99999999998 578999977            999999999999


Q ss_pred             ccC---CCcCCCcEEEEee
Q 017679          289 VRG---SWLKPGAVVLDVG  304 (368)
Q Consensus       289 I~~---e~ik~gavVIDvg  304 (368)
                      +.+   .+++++.+|+|+.
T Consensus        68 ~~~~~~~~~~~~~~v~~~a   86 (86)
T cd05191          68 VLEEATAKINEGAVVIDLA   86 (86)
T ss_pred             chHHHHHhcCCCCEEEecC
Confidence            866   7889999999973

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=99.08  E-value=1.2e-09  Score=94.94  Aligned_cols=128  Identities=27%  Similarity=0.422  Sum_probs=96.4

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC-------------------CHhhhcc
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-------------------NPEQITS  274 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~-------------------~L~~~~~  274 (368)
                      +..|+.+.+++.++++++++++|+|.|++ |+.++..|.+.| ..|++++++..                   ++.+.+.
T Consensus         2 d~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (155)
T cd01065           2 DGLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLA   80 (155)
T ss_pred             CHHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccc
Confidence            34899999999999999999999999875 999999999986 68999977531                   2334468


Q ss_pred             CCCEEEEecCCCCc------ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHH
Q 017679          275 EADIVIAAAGVANL------VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPM  348 (368)
Q Consensus       275 ~ADIVIsAvG~p~~------I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~  348 (368)
                      ++|+||++++....      +....+++|.+|+|+++.+..          ..+.     +.+ +..+. +-++|     
T Consensus        81 ~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~----------~~l~-----~~~-~~~g~-~~v~g-----  138 (155)
T cd01065          81 EADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLE----------TPLL-----KEA-RALGA-KTIDG-----  138 (155)
T ss_pred             cCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCC----------CHHH-----HHH-HHCCC-ceeCC-----
Confidence            89999999986432      333456899999999987642          1122     333 44454 34555     


Q ss_pred             HHHHHHHHHHHHHHHHhC
Q 017679          349 TVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       349 T~amLl~N~v~a~~~~~~  366 (368)
                       ..||+.|.+++++.|+|
T Consensus       139 -~~~~~~q~~~~~~~~~~  155 (155)
T cd01065         139 -LEMLVYQAAEAFELWTG  155 (155)
T ss_pred             -HHHHHHHHHHHHHHhcC
Confidence             45999999999999986

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=99.02  E-value=3.5e-10  Score=116.78  Aligned_cols=111  Identities=21%  Similarity=0.269  Sum_probs=85.8

Q ss_pred             HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCc
Q 017679          222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      +++.++..+.||+|+|+|.|.+ |+.+|..|...|++|+++++..             .++.+.++.|||||+++|.+++
T Consensus       244 ~~R~~~~~LaGKtVgVIG~G~I-Gr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~i  322 (476)
T PTZ00075        244 IFRATDVMIAGKTVVVCGYGDV-GKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDI  322 (476)
T ss_pred             HHHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCcccc
Confidence            4556688999999999999985 9999999999999999997652             3577889999999999999999


Q ss_pred             ccCCCc---CCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEe
Q 017679          289 VRGSWL---KPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI  338 (368)
Q Consensus       289 I~~e~i---k~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~i  338 (368)
                      |+.+++   |+|+++|++|....+...+.     -+..+|+|..++++.+..+
T Consensus       323 I~~e~~~~MKpGAiLINvGr~d~Ei~i~a-----L~~~~~vdv~evep~v~~~  370 (476)
T PTZ00075        323 ITLEHMRRMKNNAIVGNIGHFDNEIQVAE-----LEAYPGIEIVEIKPQVDRY  370 (476)
T ss_pred             cCHHHHhccCCCcEEEEcCCCchHHhHHH-----HHhcCCceeecccCCCCeE
Confidence            987766   99999999998753310000     0234567766665555444

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=99.01  E-value=7.4e-10  Score=99.68  Aligned_cols=86  Identities=26%  Similarity=0.425  Sum_probs=64.7

Q ss_pred             HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCcc
Q 017679          223 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLV  289 (368)
Q Consensus       223 L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~I  289 (368)
                      ++..+..+.||+++|+|.|.+ |+.+|..|...||.|+|+....             ..+++.+++|||+|++||..+.+
T Consensus        14 ~r~t~~~l~Gk~vvV~GYG~v-G~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vtaTG~~~vi   92 (162)
T PF00670_consen   14 MRATNLMLAGKRVVVIGYGKV-GKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTATGNKDVI   92 (162)
T ss_dssp             HHHH-S--TTSEEEEE--SHH-HHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred             HhcCceeeCCCEEEEeCCCcc-cHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEECCCCcccc
Confidence            346789999999999999985 9999999999999999997652             36788999999999999999988


Q ss_pred             cCCC---cCCCcEEEEeecCCCC
Q 017679          290 RGSW---LKPGAVVLDVGTCPVD  309 (368)
Q Consensus       290 ~~e~---ik~gavVIDvg~n~~~  309 (368)
                      +.++   +|+|++|.++|....|
T Consensus        93 ~~e~~~~mkdgail~n~Gh~d~E  115 (162)
T PF00670_consen   93 TGEHFRQMKDGAILANAGHFDVE  115 (162)
T ss_dssp             -HHHHHHS-TTEEEEESSSSTTS
T ss_pred             CHHHHHHhcCCeEEeccCcCcee
Confidence            8765   5899999999987654

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=99.00  E-value=5.5e-10  Score=114.10  Aligned_cols=155  Identities=19%  Similarity=0.190  Sum_probs=114.6

Q ss_pred             HcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc
Q 017679          131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL  210 (368)
Q Consensus       131 ~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~  210 (368)
                      ..|+++-.+      .|.|++.++++.-+...=.|..      ..+-..-+..++.-.|.|..-|.++.|...       
T Consensus       103 asGLdSmVl------GE~QIlgQVK~A~~~A~~~g~~------g~~L~~lf~~A~~~aKrVrteT~I~~~~vS-------  163 (414)
T PRK13940        103 ACGLESMVL------GEPQILGQVKDSYTLSKKNHAI------GKELDRVFQKVFATAKRVRSETRIGHCPVS-------  163 (414)
T ss_pred             Hhccchhhc------CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHHhccCCCCCCcC-------
Confidence            468887644      6678888777655432112211      112223445578778998877766654443       


Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC------------------CCHhh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT------------------KNPEQ  271 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t------------------~~L~~  271 (368)
                          .+.+.+++.++...+++||+|+|||+|++ |+.++..|..+|+ .+++++|+.                  .++.+
T Consensus       164 ----v~~~Av~la~~~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~  238 (414)
T PRK13940        164 ----VAFSAITLAKRQLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ  238 (414)
T ss_pred             ----HHHHHHHHHHHHhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH
Confidence                23778899988878899999999999998 9999999999996 799999872                  13456


Q ss_pred             hccCCCEEEEecCCCCc-ccCCCcCC-CcEEEEeecCCCC
Q 017679          272 ITSEADIVIAAAGVANL-VRGSWLKP-GAVVLDVGTCPVD  309 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~-I~~e~ik~-gavVIDvg~n~~~  309 (368)
                      .+.+||+||+||+.|++ |+.++++. ..++||++.+++-
T Consensus       239 ~l~~aDiVI~aT~a~~~vi~~~~~~~~~~~~iDLavPRdi  278 (414)
T PRK13940        239 LIKKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQAL  278 (414)
T ss_pred             HhccCCEEEECcCCCCeeECHHHhCCCCeEEEEeCCCCCC
Confidence            78999999999999998 68887753 4699999999875

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=98.79  E-value=1.2e-08  Score=101.81  Aligned_cols=155  Identities=14%  Similarity=0.075  Sum_probs=107.3

Q ss_pred             HHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcC
Q 017679          130 EEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREP  209 (368)
Q Consensus       130 ~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~  209 (368)
                      =..|+++-.+      .|.|++.++++.-....=.|-.      ...-..-+..++.-.|.|.--|.++.|...      
T Consensus        96 VasGLDSmVl------GE~QIlGQVK~Ay~~A~~~g~~------g~~L~~lf~~A~~~aKrVRteT~I~~~~vS------  157 (338)
T PRK00676         96 VTSGMDSLIL------GETEIQGQVKRAYLKAARERKL------PFALHFLFQKALKEGKVFRSKGGAPYAEVT------  157 (338)
T ss_pred             Hhcccchhhc------CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHhhhcCCCCCCcC------
Confidence            3578888644      5677877777654332212211      111123344577778988876655544332      


Q ss_pred             ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-----CCHh----hhccCCCEE
Q 017679          210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-----KNPE----QITSEADIV  279 (368)
Q Consensus       210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-----~~L~----~~~~~ADIV  279 (368)
                           -+.+++++++.. .+++||+|+|||+|++ |+.++..|.++|+ .|++++|+.     .++.    ++..++|||
T Consensus       158 -----v~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvV  230 (338)
T PRK00676        158 -----IESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVI  230 (338)
T ss_pred             -----HHHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEE
Confidence                 235577777665 6799999999999997 9999999999995 799999983     2232    456799999


Q ss_pred             EEe---cCCCCc-ccCCCcCC--CcEEEEeecCCCC
Q 017679          280 IAA---AGVANL-VRGSWLKP--GAVVLDVGTCPVD  309 (368)
Q Consensus       280 IsA---vG~p~~-I~~e~ik~--gavVIDvg~n~~~  309 (368)
                      |++   |+.|++ ++.+++++  ..++||++.+++-
T Consensus       231 Is~t~~Tas~~p~i~~~~~~~~~~r~~iDLAvPRdI  266 (338)
T PRK00676        231 FFGSSESAYAFPHLSWESLADIPDRIVFDFNVPRTF  266 (338)
T ss_pred             EEcCCcCCCCCceeeHHHHhhccCcEEEEecCCCCC
Confidence            997   678887 67777653  2489999999875

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.75  E-value=7.5e-08  Score=87.74  Aligned_cols=95  Identities=31%  Similarity=0.330  Sum_probs=71.5

Q ss_pred             CHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------
Q 017679          215 TPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------  267 (368)
Q Consensus       215 Ta~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------  267 (368)
                      |+.+.+++    |++++.+++|++++|+|..+.+|+.++..|.++|+.|+++.|+..                       
T Consensus         7 ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~   86 (194)
T cd01078           7 TAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETS   86 (194)
T ss_pred             HHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC
Confidence            55555554    455677999999999997555699999999999999999977521                       


Q ss_pred             ---CHhhhccCCCEEEEecCCCCc--ccCC-CcCCCcEEEEeecCCCC
Q 017679          268 ---NPEQITSEADIVIAAAGVANL--VRGS-WLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       268 ---~L~~~~~~ADIVIsAvG~p~~--I~~e-~ik~gavVIDvg~n~~~  309 (368)
                         ++.+.++++|+||++++.+..  ...+ ..+++.+|+|+.+++..
T Consensus        87 ~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~  134 (194)
T cd01078          87 DDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPV  134 (194)
T ss_pred             CHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCC
Confidence               123567889999999987763  3333 34568999999999864

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.72  E-value=5.6e-08  Score=97.06  Aligned_cols=92  Identities=21%  Similarity=0.216  Sum_probs=75.0

Q ss_pred             HHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhC-C-CEEEEEeCCCC---------------CHhhhccCCCEEE
Q 017679          218 GCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALTK---------------NPEQITSEADIVI  280 (368)
Q Consensus       218 gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~-g-AtVti~h~~t~---------------~L~~~~~~ADIVI  280 (368)
                      ++..-.+..+.+++||+|+|+|++|.+|+.++..|.++ | ..+++++|+..               ++.+.+.++|+||
T Consensus       141 ~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv  220 (340)
T PRK14982        141 QVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVV  220 (340)
T ss_pred             HHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEE
Confidence            44444556777899999999999878899999999854 5 48999988632               2336778999999


Q ss_pred             EecCCCCc--ccCCCcCCCcEEEEeecCCCC
Q 017679          281 AAAGVANL--VRGSWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       281 sAvG~p~~--I~~e~ik~gavVIDvg~n~~~  309 (368)
                      ++++.|+.  +++++++++.++||++.+++-
T Consensus       221 ~~ts~~~~~~I~~~~l~~~~~viDiAvPRDV  251 (340)
T PRK14982        221 WVASMPKGVEIDPETLKKPCLMIDGGYPKNL  251 (340)
T ss_pred             ECCcCCcCCcCCHHHhCCCeEEEEecCCCCC
Confidence            99998765  788999999999999999864

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=98.64  E-value=9.2e-08  Score=90.25  Aligned_cols=92  Identities=22%  Similarity=0.315  Sum_probs=77.7

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE---EEEEeCC----CC--------------------
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT---VSIVHAL----TK--------------------  267 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt---Vti~h~~----t~--------------------  267 (368)
                      +-.|++..++..+.++++++++|+|+|++ |+.++.+|.+.|++   |++++|+    ..                    
T Consensus         8 ~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~   86 (226)
T cd05311           8 TLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK   86 (226)
T ss_pred             HHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc
Confidence            45789999999999999999999999998 99999999999975   9999987    11                    


Q ss_pred             ---CHhhhccCCCEEEEecCCCCcccCCCcC---CCcEEEEeecCCCC
Q 017679          268 ---NPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVGTCPVD  309 (368)
Q Consensus       268 ---~L~~~~~~ADIVIsAvG~p~~I~~e~ik---~gavVIDvg~n~~~  309 (368)
                         ++.+.++++|+||++++ ++.+++++++   ++.+|+|+. ||.+
T Consensus        87 ~~~~l~~~l~~~dvlIgaT~-~G~~~~~~l~~m~~~~ivf~ls-nP~~  132 (226)
T cd05311          87 TGGTLKEALKGADVFIGVSR-PGVVKKEMIKKMAKDPIVFALA-NPVP  132 (226)
T ss_pred             ccCCHHHHHhcCCEEEeCCC-CCCCCHHHHHhhCCCCEEEEeC-CCCC
Confidence               23455677999999999 7888888876   889999988 7754

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.58  E-value=1.2e-07  Score=97.38  Aligned_cols=94  Identities=23%  Similarity=0.316  Sum_probs=79.4

Q ss_pred             CCHHHHHHHHHHh-CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEE
Q 017679          214 CTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV  279 (368)
Q Consensus       214 cTa~gv~~lL~~~-~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIV  279 (368)
                      +|..+++.-+++. ++.+.||+|+|+|.|.+ |+.++..|...|++|+++.+..             .++.+.++.||+|
T Consensus       193 gt~~s~~~ai~rat~~~l~Gk~VlViG~G~I-G~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVV  271 (425)
T PRK05476        193 GTGESLLDGIKRATNVLIAGKVVVVAGYGDV-GKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIF  271 (425)
T ss_pred             HHHhhhHHHHHHhccCCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEE
Confidence            5678888777666 78899999999999985 9999999999999999997643             2466778899999


Q ss_pred             EEecCCCCcccCC---CcCCCcEEEEeecCCC
Q 017679          280 IAAAGVANLVRGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       280 IsAvG~p~~I~~e---~ik~gavVIDvg~n~~  308 (368)
                      |+++|.++.++.+   .+|+|++++.+|....
T Consensus       272 I~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        272 VTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             EECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence            9999998888754   4699999999998654

>PLN00203 glutamyl-tRNA reductase

Probab=98.58  E-value=5.1e-08  Score=102.35  Aligned_cols=146  Identities=14%  Similarity=0.123  Sum_probs=101.2

Q ss_pred             CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHH
Q 017679          146 TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIR  225 (368)
Q Consensus       146 ~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~  225 (368)
                      .|.|++.++++.-+...=.|-.      ..+-..-+..+|.-.|.|.--|.++.|...           .+.+.+++.++
T Consensus       195 GE~QIlgQVK~A~~~A~~~g~~------g~~L~~LF~~Ai~~~KrVRteT~I~~~~vS-----------v~s~Av~la~~  257 (519)
T PLN00203        195 GEGQILAQVKQVVKVGQGVDGF------GRNLSGLFKHAITAGKRVRTETNIASGAVS-----------VSSAAVELALM  257 (519)
T ss_pred             CChHHHHHHHHHHHHHHHcCCc------cHHHHHHHHHHHHHHHHHhhccCCCCCCcC-----------HHHHHHHHHHH
Confidence            4567777666554321111111      111123344477778888766655544332           24678888887


Q ss_pred             hCC--CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------CCHhhhccCCCEEEEe
Q 017679          226 SGV--EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------KNPEQITSEADIVIAA  282 (368)
Q Consensus       226 ~~i--~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------~~L~~~~~~ADIVIsA  282 (368)
                      ..-  ++.+++|+|||+|++ |+.++..|...|+ .|++++++.                    .++.+.+.+||+||++
T Consensus       258 ~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsA  336 (519)
T PLN00203        258 KLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTS  336 (519)
T ss_pred             hcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEc
Confidence            654  499999999999886 9999999999997 799998862                    1344667899999999


Q ss_pred             cCCCCc-ccCCCcCC----------CcEEEEeecCCCC
Q 017679          283 AGVANL-VRGSWLKP----------GAVVLDVGTCPVD  309 (368)
Q Consensus       283 vG~p~~-I~~e~ik~----------gavVIDvg~n~~~  309 (368)
                      |+.++. ++++|+++          ..++||++.+++-
T Consensus       337 T~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdI  374 (519)
T PLN00203        337 TSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNV  374 (519)
T ss_pred             cCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCC
Confidence            998886 78888643          2499999999864

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.47  E-value=7.5e-07  Score=89.86  Aligned_cols=124  Identities=25%  Similarity=0.286  Sum_probs=86.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------CCHhhhccCCCEEEEecC---C
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAG---V  285 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG---~  285 (368)
                      +.+++|+|||+|.+ |+.++..|...|++|++++++.                     .++.+.+++||+||++++   .
T Consensus       165 l~~~~VlViGaG~v-G~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       165 VEPGDVTIIGGGVV-GTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CCCceEEEEcCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence            57789999999875 9999999999999999998642                     134567789999999984   3


Q ss_pred             --CCcccCCC---cCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhc---cceEeccCCCcccHHHHHHHHHHH
Q 017679          286 --ANLVRGSW---LKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMR---LASVITPVPGGVGPMTVAMLLSNT  357 (368)
Q Consensus       286 --p~~I~~e~---ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~---~a~~iTPVPGGVGp~T~amLl~N~  357 (368)
                        |.+++.++   +++|.+|||+++.+.-     +.+ ..+ .+..|++.+..   ..-.+.-.||-+ |.|...++.|.
T Consensus       244 ~~p~lit~~~l~~mk~g~vIvDva~d~GG-----~~e-~~~-~t~~d~p~~~~~Gv~~~~v~nlP~~~-p~~aS~~~~~~  315 (370)
T TIGR00518       244 KAPKLVSNSLVAQMKPGAVIVDVAIDQGG-----CVE-TSR-PTTHDQPTYAVHDVVHYCVANMPGAV-PKTSTYALTNA  315 (370)
T ss_pred             CCCcCcCHHHHhcCCCCCEEEEEecCCCC-----Ccc-CCc-CCCCCCCEEEECCeEEEEeCCccccc-HHHHHHHHHHH
Confidence              55677765   4789999999987531     100 000 12112111100   123455689999 99999999888


Q ss_pred             HHHHH
Q 017679          358 LDSAK  362 (368)
Q Consensus       358 v~a~~  362 (368)
                      +..+-
T Consensus       316 l~~~l  320 (370)
T TIGR00518       316 TMPYV  320 (370)
T ss_pred             HHHHH
Confidence            75543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.46  E-value=5.5e-07  Score=91.95  Aligned_cols=94  Identities=27%  Similarity=0.360  Sum_probs=76.7

Q ss_pred             CCHHHHHHHHH-HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEE
Q 017679          214 CTPKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV  279 (368)
Q Consensus       214 cTa~gv~~lL~-~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIV  279 (368)
                      +|...+++-+. ..++.+.||+|+|+|.|.+ |+.+++.|...|++|+++.+..             .++.+.++.+|+|
T Consensus       176 g~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVV  254 (406)
T TIGR00936       176 GTGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF  254 (406)
T ss_pred             ccchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEE
Confidence            45565555444 4578899999999999986 9999999999999999986543             2356778899999


Q ss_pred             EEecCCCCcccC---CCcCCCcEEEEeecCCC
Q 017679          280 IAAAGVANLVRG---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       280 IsAvG~p~~I~~---e~ik~gavVIDvg~n~~  308 (368)
                      |+++|.++.++.   ..+|+|++++.+|....
T Consensus       255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~~  286 (406)
T TIGR00936       255 ITATGNKDVIRGEHFENMKDGAIVANIGHFDV  286 (406)
T ss_pred             EECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence            999999988876   45699999999998654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.44  E-value=4.3e-07  Score=92.96  Aligned_cols=93  Identities=18%  Similarity=0.267  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC-----------------CHhhhccCCC
Q 017679          216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------------NPEQITSEAD  277 (368)
Q Consensus       216 a~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~-----------------~L~~~~~~AD  277 (368)
                      +...+++.+....++.|++|+|||+|.+ |+.++..|...|+ .|++++++..                 ++.+.+..+|
T Consensus       166 ~~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aD  244 (423)
T PRK00045        166 ASAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEAD  244 (423)
T ss_pred             HHHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCC
Confidence            3445666665544789999999999886 9999999999997 7999988631                 2335678899


Q ss_pred             EEEEecCCCCc-ccCCCcCC--------CcEEEEeecCCCC
Q 017679          278 IVIAAAGVANL-VRGSWLKP--------GAVVLDVGTCPVD  309 (368)
Q Consensus       278 IVIsAvG~p~~-I~~e~ik~--------gavVIDvg~n~~~  309 (368)
                      +||+|||.|+. ++.+|+++        +.++||++.++.-
T Consensus       245 vVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~Prdi  285 (423)
T PRK00045        245 IVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVPRDI  285 (423)
T ss_pred             EEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCCCCC
Confidence            99999999886 78888854        4799999987753

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.43  E-value=3.7e-07  Score=93.33  Aligned_cols=93  Identities=24%  Similarity=0.288  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC-----------------CHhhhccCCC
Q 017679          216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-----------------NPEQITSEAD  277 (368)
Q Consensus       216 a~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~-----------------~L~~~~~~AD  277 (368)
                      +.+++++.++...++.|++|+|||+|.+ |+.++..|...| ..|++++++..                 ++.+.+..+|
T Consensus       164 ~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aD  242 (417)
T TIGR01035       164 SSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEAD  242 (417)
T ss_pred             HHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCC
Confidence            3566667766656799999999999886 999999999999 68999987631                 2445678999


Q ss_pred             EEEEecCCCCc-ccCCCcCC-------CcEEEEeecCCCC
Q 017679          278 IVIAAAGVANL-VRGSWLKP-------GAVVLDVGTCPVD  309 (368)
Q Consensus       278 IVIsAvG~p~~-I~~e~ik~-------gavVIDvg~n~~~  309 (368)
                      +||++||.|+. ++.+|+++       ..++||++.++.-
T Consensus       243 vVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdi  282 (417)
T TIGR01035       243 IVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRDV  282 (417)
T ss_pred             EEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence            99999998886 78888753       3599999977643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=98.38  E-value=7.8e-07  Score=87.53  Aligned_cols=117  Identities=32%  Similarity=0.493  Sum_probs=81.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------CCHhhhccCCCEEEEec---C-
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAA---G-  284 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------~~L~~~~~~ADIVIsAv---G-  284 (368)
                      ....+|+|||.| +||.-.|++....||+|||...+-                     .++++.+++||+||.|+   | 
T Consensus       166 V~~~kv~iiGGG-vvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpga  244 (371)
T COG0686         166 VLPAKVVVLGGG-VVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGA  244 (371)
T ss_pred             CCCccEEEECCc-cccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCC
Confidence            455789999965 579999999999999999997651                     35789999999999887   3 


Q ss_pred             -CCCcccCCCc---CCCcEEEEeecCCC---CCCCCCCCCCC--cEEEcccchhhhhccceEeccCCCcccHHHHHHHHH
Q 017679          285 -VANLVRGSWL---KPGAVVLDVGTCPV---DVSVDPSCEYG--YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLS  355 (368)
Q Consensus       285 -~p~~I~~e~i---k~gavVIDvg~n~~---~~~~d~t~~~~--~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~  355 (368)
                       .|.+++.+|+   |||+++||+++..-   |++ .+|++.+  +..-|-+.|        ++.-.||-| |-|..+-+.
T Consensus       245 kaPkLvt~e~vk~MkpGsVivDVAiDqGGc~Et~-~~TTh~~PtY~~~gvvhY--------~VaNmPgaV-prTst~AL~  314 (371)
T COG0686         245 KAPKLVTREMVKQMKPGSVIVDVAIDQGGCFETS-HPTTHDDPTYEVDGVVHY--------GVANMPGAV-PRTSTQALT  314 (371)
T ss_pred             CCceehhHHHHHhcCCCcEEEEEEEcCCCceecc-ccccCCCCceeecCEEEE--------ecCCCCccc-cchhHHHhh
Confidence             4778888864   88999999999753   221 1121111  111222222        222456655 888888777


Q ss_pred             HH
Q 017679          356 NT  357 (368)
Q Consensus       356 N~  357 (368)
                      |.
T Consensus       315 na  316 (371)
T COG0686         315 NA  316 (371)
T ss_pred             hc
Confidence            74

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.37  E-value=5e-07  Score=88.86  Aligned_cols=154  Identities=20%  Similarity=0.260  Sum_probs=98.1

Q ss_pred             HcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc
Q 017679          131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL  210 (368)
Q Consensus       131 ~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~  210 (368)
                      ..|+++-.+      .|.|++.++++.-+...=.|..      ...-..-..+++.-.|.|.--+....+.+        
T Consensus       100 a~GLdS~v~------GE~qIlgQvk~A~~~a~~~g~~------~~~L~~lf~~a~~~~k~vr~et~i~~~~~--------  159 (311)
T cd05213         100 ASGLDSMVV------GETQILGQVKNAYKLAKEAGTS------GKLLNRLFQKAIKVGKRVRTETGISRGAV--------  159 (311)
T ss_pred             Hhhhhhhhc------CChHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHhhhcCCCCCCc--------
Confidence            467877644      5677777776654432111211      00111222335555677765544443222        


Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC-----------------CHhhh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------------NPEQI  272 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~-----------------~L~~~  272 (368)
                         ..+...+++.+...-++.|++|+|||.|.+ |+.++..|...|+ .|++++++..                 ++.+.
T Consensus       160 ---sv~~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~  235 (311)
T cd05213         160 ---SISSAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLEL  235 (311)
T ss_pred             ---CHHHHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHH
Confidence               223445677776655689999999999886 9999999998774 7999987631                 24566


Q ss_pred             ccCCCEEEEecCCCCc---ccC---CCcCCCcEEEEeecCCC
Q 017679          273 TSEADIVIAAAGVANL---VRG---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~---I~~---e~ik~gavVIDvg~n~~  308 (368)
                      +.++|+||++||.|+.   +..   ..-.++.++||++.++.
T Consensus       236 l~~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrd  277 (311)
T cd05213         236 LNEADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRD  277 (311)
T ss_pred             HhcCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCC
Confidence            7889999999998876   211   12235789999997764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.30  E-value=2.2e-06  Score=87.79  Aligned_cols=95  Identities=26%  Similarity=0.370  Sum_probs=76.2

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEE
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV  279 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIV  279 (368)
                      -|--..+-.+++..++.+.|++|+|+|.|.+ |+.++..+...||+|+++....             .++.+.++.+|+|
T Consensus       183 g~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVV  261 (413)
T cd00401         183 GCRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIF  261 (413)
T ss_pred             hhchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEE
Confidence            3433344555666788999999999999986 9999999999999999986542             2356778899999


Q ss_pred             EEecCCCCcccC---CCcCCCcEEEEeecCCC
Q 017679          280 IAAAGVANLVRG---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       280 IsAvG~p~~I~~---e~ik~gavVIDvg~n~~  308 (368)
                      |.++|.++.+..   +.+++|.+++.+|....
T Consensus       262 I~atG~~~~i~~~~l~~mk~GgilvnvG~~~~  293 (413)
T cd00401         262 VTTTGNKDIITGEHFEQMKDGAIVCNIGHFDV  293 (413)
T ss_pred             EECCCCHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence            999999887754   46799999999997643

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=98.29  E-value=1.4e-06  Score=78.79  Aligned_cols=83  Identities=25%  Similarity=0.329  Sum_probs=66.0

Q ss_pred             HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecC-CC---C
Q 017679          225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAG-VA---N  287 (368)
Q Consensus       225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG-~p---~  287 (368)
                      ..+.++.||+|.|||.|.+ |+.+|.+|...|++|+.++++.             .++.+.+++||+|+...+ .+   +
T Consensus        29 ~~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~  107 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRG  107 (178)
T ss_dssp             TTBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTT
T ss_pred             CCccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccce
Confidence            3456899999999999987 9999999999999999998864             367889999999998887 23   4


Q ss_pred             cccCC---CcCCCcEEEEeecCCC
Q 017679          288 LVRGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       288 ~I~~e---~ik~gavVIDvg~n~~  308 (368)
                      +|+.+   .+|+|+++|++|--.+
T Consensus       108 li~~~~l~~mk~ga~lvN~aRG~~  131 (178)
T PF02826_consen  108 LINAEFLAKMKPGAVLVNVARGEL  131 (178)
T ss_dssp             SBSHHHHHTSTTTEEEEESSSGGG
T ss_pred             eeeeeeeeccccceEEEeccchhh
Confidence            67765   4589999999996543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=98.28  E-value=1.8e-06  Score=86.37  Aligned_cols=87  Identities=26%  Similarity=0.387  Sum_probs=73.4

Q ss_pred             HHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCC
Q 017679          221 ELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       221 ~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      -+++..++-+.||+|||.|.|-+ ||.+|+.|...||.|.+..-..             ..+.+..+.+||+|++||.-+
T Consensus       198 gI~RaTn~liaGK~vVV~GYG~v-GrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~TGnkd  276 (420)
T COG0499         198 GILRATNVLLAGKNVVVAGYGWV-GRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTATGNKD  276 (420)
T ss_pred             HHHhhhceeecCceEEEeccccc-chHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEccCCcC
Confidence            34455889999999999999985 9999999999999999986543             246688899999999999999


Q ss_pred             cccCCCc---CCCcEEEEeecCCC
Q 017679          288 LVRGSWL---KPGAVVLDVGTCPV  308 (368)
Q Consensus       288 ~I~~e~i---k~gavVIDvg~n~~  308 (368)
                      .|+.+++   |.|+++.+.|..-.
T Consensus       277 Vi~~eh~~~MkDgaIl~N~GHFd~  300 (420)
T COG0499         277 VIRKEHFEKMKDGAILANAGHFDV  300 (420)
T ss_pred             ccCHHHHHhccCCeEEecccccce
Confidence            9988875   78999999995433

>PLN02494 adenosylhomocysteinase

Probab=98.24  E-value=2.7e-06  Score=88.20  Aligned_cols=91  Identities=24%  Similarity=0.312  Sum_probs=73.8

Q ss_pred             CHHHHHHHH-HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhccCCCEEE
Q 017679          215 TPKGCIELL-IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVI  280 (368)
Q Consensus       215 Ta~gv~~lL-~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~~ADIVI  280 (368)
                      |-+.+++.+ +..++.+.||+|+|+|.|.+ |+.+|+.|...|++|+++.+...             ++.+.++.||+||
T Consensus       236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI  314 (477)
T PLN02494        236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV  314 (477)
T ss_pred             ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence            334445444 45588899999999999986 99999999999999999865431             3567789999999


Q ss_pred             EecCCCCcccC---CCcCCCcEEEEeecC
Q 017679          281 AAAGVANLVRG---SWLKPGAVVLDVGTC  306 (368)
Q Consensus       281 sAvG~p~~I~~---e~ik~gavVIDvg~n  306 (368)
                      +++|..+++..   +.+|+|++++.+|..
T Consensus       315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             ECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence            99999888743   467999999999984

>PLN02928 oxidoreductase family protein

Probab=98.19  E-value=3e-06  Score=84.85  Aligned_cols=136  Identities=21%  Similarity=0.256  Sum_probs=91.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------------CCHhhhccCCCEEEEe
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------------KNPEQITSEADIVIAA  282 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------------~~L~~~~~~ADIVIsA  282 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|+.++++.                         .+|.+.+++||+|+.+
T Consensus       155 ~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        155 DTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             cCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence            4799999999999987 9999999999999999987641                         2577889999999999


Q ss_pred             cCC----CCcccCC---CcCCCcEEEEeecCCCCCCCCCC--CCCCcEEEc---ccchhhh--------hccceEeccCC
Q 017679          283 AGV----ANLVRGS---WLKPGAVVLDVGTCPVDVSVDPS--CEYGYRLMG---DVCYEEA--------MRLASVITPVP  342 (368)
Q Consensus       283 vG~----p~~I~~e---~ik~gavVIDvg~n~~~~~~d~t--~~~~~kl~G---DVd~~~~--------~~~a~~iTPVP  342 (368)
                      ++.    .++|..+   .+|+|+++|++|--.+-+. +..  .-..|++.|   ||-..+-        ....-.+||=-
T Consensus       234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde-~AL~~AL~~g~i~gAaLDV~~~EP~~~~~pL~~~~nviiTPHi  312 (347)
T PLN02928        234 CTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDY-DAVLAALESGHLGGLAIDVAWSEPFDPDDPILKHPNVIITPHV  312 (347)
T ss_pred             CCCChHhhcccCHHHHhcCCCCeEEEECCCccccCH-HHHHHHHHcCCeeEEEEccCCCCCCCCCChhhcCCCEEECCcC
Confidence            873    3467665   4589999999996554310 000  001234433   5532221        01134688887


Q ss_pred             CcccHHHHHHHHHHHHHHHHHHh
Q 017679          343 GGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       343 GGVGp~T~amLl~N~v~a~~~~~  365 (368)
                      ||.-.-+..-+...+++..++|+
T Consensus       313 a~~t~~~~~~~~~~~~~nl~~~~  335 (347)
T PLN02928        313 AGVTEYSYRSMGKIVGDAALQLH  335 (347)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHH
Confidence            87765555555555555555544

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.10  E-value=2.3e-05  Score=82.22  Aligned_cols=185  Identities=16%  Similarity=0.226  Sum_probs=109.5

Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccC----CHHHHHHHHHHhCC
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPC----TPKGCIELLIRSGV  228 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~Pc----Ta~gv~~lL~~~~i  228 (368)
                      .++.|+++    .+++.+.+|.+ + .++++.+. +|-+-.+.-.-.=|+...++.+.+-+-    =..|+++....++-
T Consensus        78 e~~~l~~g----~tli~~l~p~~-n-~~ll~~l~-~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~~lgr  150 (511)
T TIGR00561        78 EIAELPAG----KALVSFIWPAQ-N-PELMEKLA-AKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAHEFGR  150 (511)
T ss_pred             HHHhcCCC----CEEEEEcCccC-C-HHHHHHHH-HcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHHHhhh
Confidence            36667664    46777777754 3 45555553 222322211111122111111111110    02667777666543


Q ss_pred             ----------CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------C---------------
Q 017679          229 ----------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------N---------------  268 (368)
Q Consensus       229 ----------~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~---------------  268 (368)
                                .+.+.+|+|+|.|.+ |...+..+...|+.|+++..+..               +               
T Consensus       151 ~~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~  229 (511)
T TIGR00561       151 FFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVM  229 (511)
T ss_pred             hcCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeec
Confidence                      245689999999876 99999999999999999865420               0               


Q ss_pred             -----------HhhhccCCCEEEEec---C--CCCcccCCCc---CCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchh
Q 017679          269 -----------PEQITSEADIVIAAA---G--VANLVRGSWL---KPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYE  329 (368)
Q Consensus       269 -----------L~~~~~~ADIVIsAv---G--~p~~I~~e~i---k~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~  329 (368)
                                 +.+.++++||||+++   |  .|.+++.+|+   |+|.+|||++..+-               |++++-
T Consensus       230 s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G---------------Gn~E~t  294 (511)
T TIGR00561       230 SEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG---------------GNCEYT  294 (511)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC---------------CCEEEe
Confidence                       345678999999999   5  4557888775   88999999998642               222221


Q ss_pred             h----hhc----cceEeccCCCcccHHHHHHHHHHHHHH
Q 017679          330 E----AMR----LASVITPVPGGVGPMTVAMLLSNTLDS  360 (368)
Q Consensus       330 ~----~~~----~a~~iTPVPGGVGp~T~amLl~N~v~a  360 (368)
                      .    ...    ..-.++-.|+-+-+-+..++-.|++.-
T Consensus       295 ~p~~~~~~~~GV~~~gv~nlPs~~p~~AS~l~s~nl~~~  333 (511)
T TIGR00561       295 KPGEVYTTENQVKVIGYTDLPSRLPTQSSQLYGTNLVNL  333 (511)
T ss_pred             cCceEEEecCCEEEEeeCCccccCHHHHHHHHHHHHHHH
Confidence            0    000    122456778888666665555555433

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=98.03  E-value=1.3e-05  Score=81.41  Aligned_cols=144  Identities=19%  Similarity=0.217  Sum_probs=93.8

Q ss_pred             HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC-------
Q 017679          222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-------  285 (368)
Q Consensus       222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~-------  285 (368)
                      +.++.+.++.||+|.|||.|++ |+.+|..|...|++|..++...         .+|.+.+++||||+..++-       
T Consensus       106 l~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~  184 (378)
T PRK15438        106 LAERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGPYK  184 (378)
T ss_pred             HhccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcccc
Confidence            3456788999999999999986 9999999999999999987421         2588999999999977752       


Q ss_pred             -CCcccCC---CcCCCcEEEEeecCCCCCCC---CCCCC-CCcEEEcccchhh------hhccceEeccCCCcccHHHHH
Q 017679          286 -ANLVRGS---WLKPGAVVLDVGTCPVDVSV---DPSCE-YGYRLMGDVCYEE------AMRLASVITPVPGGVGPMTVA  351 (368)
Q Consensus       286 -p~~I~~e---~ik~gavVIDvg~n~~~~~~---d~t~~-~~~kl~GDVd~~~------~~~~a~~iTPVPGGVGp~T~a  351 (368)
                       -+++..+   .+|+|+++|++|--.+-+..   +.... .-....=||-..+      ..+....+||=-+|...-+..
T Consensus       185 T~~li~~~~l~~mk~gailIN~aRG~vVDe~AL~~aL~~g~~~ga~LDV~e~EP~~~~~Ll~~~~i~TPHiAg~s~e~~~  264 (378)
T PRK15438        185 TLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTPHIAGYTLEGKA  264 (378)
T ss_pred             cccccCHHHHhcCCCCcEEEECCCchhcCHHHHHHHHHhCCCcEEEEecCCCCCCCchhhhhcCCEECCccCcCcHHHHH
Confidence             1346544   56899999999976653100   00000 0112344552111      112233788988887655554


Q ss_pred             HHHHHHHHHHHHHhC
Q 017679          352 MLLSNTLDSAKRAYG  366 (368)
Q Consensus       352 mLl~N~v~a~~~~~~  366 (368)
                      .....++++..+++|
T Consensus       265 ~~~~~~~~~l~~~~~  279 (378)
T PRK15438        265 RGTTQVFEAYSKFIG  279 (378)
T ss_pred             HHHHHHHHHHHHHHc
Confidence            444445555555554

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=98.02  E-value=1.4e-05  Score=81.16  Aligned_cols=144  Identities=20%  Similarity=0.205  Sum_probs=95.9

Q ss_pred             HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC-C-----
Q 017679          222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A-----  286 (368)
Q Consensus       222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~-p-----  286 (368)
                      +.++.+.++.||+|.|||.|++ |+.++..|...|++|..+....         .++.+.+++||+|+..++- +     
T Consensus       106 l~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~  184 (381)
T PRK00257        106 LAEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTKEGEHP  184 (381)
T ss_pred             HhcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCCCcccc
Confidence            3456778999999999999986 9999999999999999986421         2678889999999988872 2     


Q ss_pred             --CcccCC---CcCCCcEEEEeecCCCCCCCCCCC--CCCc---EEEcccchh------hhhccceEeccCCCcccHHHH
Q 017679          287 --NLVRGS---WLKPGAVVLDVGTCPVDVSVDPSC--EYGY---RLMGDVCYE------EAMRLASVITPVPGGVGPMTV  350 (368)
Q Consensus       287 --~~I~~e---~ik~gavVIDvg~n~~~~~~d~t~--~~~~---kl~GDVd~~------~~~~~a~~iTPVPGGVGp~T~  350 (368)
                        ++|..+   .+|+|+++|+++.-.+-+.. ..-  -..|   ...=||=..      ......-.+||=-+|...=+.
T Consensus       185 T~~li~~~~l~~mk~gailIN~aRG~vVde~-AL~~aL~~g~i~~a~LDV~e~EP~~~~~L~~~nvi~TPHiAg~s~e~~  263 (381)
T PRK00257        185 TRHLLDEAFLASLRPGAWLINASRGAVVDNQ-ALREALLSGEDLDAVLDVWEGEPQIDLELADLCTIATPHIAGYSLDGK  263 (381)
T ss_pred             ccccCCHHHHhcCCCCeEEEECCCCcccCHH-HHHHHHHhCCCcEEEEeCCCCCCCCChhhhhCCEEEcCccccCCHHHH
Confidence              467554   56899999999976653100 000  0011   233455211      111234568888888766555


Q ss_pred             HHHHHHHHHHHHHHhCC
Q 017679          351 AMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       351 amLl~N~v~a~~~~~~~  367 (368)
                      .-....+++...++++.
T Consensus       264 ~r~~~~~~~nl~~~~~~  280 (381)
T PRK00257        264 ARGTAQIYQALCRFFGI  280 (381)
T ss_pred             HHHHHHHHHHHHHHHcC
Confidence            55555555555555543

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=98.02  E-value=1.9e-05  Score=76.61  Aligned_cols=93  Identities=13%  Similarity=0.230  Sum_probs=73.9

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhhccCC
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITSEA  276 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~~~~A  276 (368)
                      ..+++-.++.|++++..+|.|+|+-+.+|..+++.|..++....+++|...                    ++.....++
T Consensus       152 r~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~~e  231 (351)
T COG5322         152 RQVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALPQE  231 (351)
T ss_pred             HHHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecccccccc
Confidence            346666778899999999999999999999999999999998888886421                    122334455


Q ss_pred             CEEE-EecCCCCc-ccCCCcCCCcEEEEeecCCCC
Q 017679          277 DIVI-AAAGVANL-VRGSWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       277 DIVI-sAvG~p~~-I~~e~ik~gavVIDvg~n~~~  309 (368)
                      |++| +|+-.++. |.+.++|||++|+|-|++.+-
T Consensus       232 ~i~v~vAs~~~g~~I~pq~lkpg~~ivD~g~P~dv  266 (351)
T COG5322         232 DILVWVASMPKGVEIFPQHLKPGCLIVDGGYPKDV  266 (351)
T ss_pred             ceEEEEeecCCCceechhhccCCeEEEcCCcCccc
Confidence            5555 77776665 899999999999999998754

>PRK13243 glyoxylate reductase; Reviewed

Probab=97.96  E-value=1.4e-05  Score=79.53  Aligned_cols=81  Identities=19%  Similarity=0.315  Sum_probs=66.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCCC----Cccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~p----~~I~  290 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|..++++.            .++.+.+++||+|+.+++..    ++|.
T Consensus       145 g~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~  223 (333)
T PRK13243        145 GYDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMIN  223 (333)
T ss_pred             ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccC
Confidence            35789999999999987 9999999999999999887642            25778899999999998742    3565


Q ss_pred             C---CCcCCCcEEEEeecCCC
Q 017679          291 G---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~  308 (368)
                      .   +.+|+|+++|+++.-.+
T Consensus       224 ~~~~~~mk~ga~lIN~aRg~~  244 (333)
T PRK13243        224 EERLKLMKPTAILVNTARGKV  244 (333)
T ss_pred             HHHHhcCCCCeEEEECcCchh
Confidence            4   45789999999997664

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.96  E-value=2.1e-05  Score=72.80  Aligned_cols=94  Identities=17%  Similarity=0.175  Sum_probs=66.7

Q ss_pred             cCCHHHHHHHHH----Hh--CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH--------------hhh
Q 017679          213 PCTPKGCIELLI----RS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------------EQI  272 (368)
Q Consensus       213 PcTa~gv~~lL~----~~--~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L--------------~~~  272 (368)
                      |.|.+|+...++    +.  +.+++||+++|+|.|+ +|+.++..|.+.|++|++++++...+              .+.
T Consensus         3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~-vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l   81 (200)
T cd01075           3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGK-VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI   81 (200)
T ss_pred             ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence            668888755544    33  7899999999999997 59999999999999999887654211              122


Q ss_pred             c-cCCCEEEEecCCCCcccCCCcCC--CcEEEEeecCCC
Q 017679          273 T-SEADIVIAAAGVANLVRGSWLKP--GAVVLDVGTCPV  308 (368)
Q Consensus       273 ~-~~ADIVIsAvG~p~~I~~e~ik~--gavVIDvg~n~~  308 (368)
                      . .++|+++.++.. +.|+.+.++.  ..+|++-+-+|.
T Consensus        82 ~~~~~Dv~vp~A~~-~~I~~~~~~~l~~~~v~~~AN~~~  119 (200)
T cd01075          82 YSVDADVFAPCALG-GVINDDTIPQLKAKAIAGAANNQL  119 (200)
T ss_pred             ccccCCEEEecccc-cccCHHHHHHcCCCEEEECCcCcc
Confidence            2 379999955542 3555554432  457788776654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.94  E-value=1.5e-05  Score=73.97  Aligned_cols=112  Identities=18%  Similarity=0.271  Sum_probs=72.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCH-----------------hhhccCCCEEEEecCCCCc-
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVANL-  288 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L-----------------~~~~~~ADIVIsAvG~p~~-  288 (368)
                      ++++||+|+|||.|.+ |.-.+..|.+.|+.|+++...- +++                 .+.+..+|+||+||+.+.. 
T Consensus         6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN   84 (202)
T PRK06718          6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVN   84 (202)
T ss_pred             EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHH
Confidence            5789999999998875 9999999999999999996542 111                 2357889999999998764 


Q ss_pred             --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHHHHHHHHH
Q 017679          289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTL  358 (368)
Q Consensus       289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~amLl~N~v  358 (368)
                        |.... +.+.. +.+.-++..              ||+-|....+.   .-+|+  -||-+|..+..|-+++-
T Consensus        85 ~~i~~~a-~~~~l-vn~~d~~~~--------------~~f~~Pa~~~~g~l~iaIs--T~G~sP~la~~lr~~ie  141 (202)
T PRK06718         85 EQVKEDL-PENAL-FNVITDAES--------------GNVVFPSALHRGKLTISVS--TDGASPKLAKKIRDELE  141 (202)
T ss_pred             HHHHHHH-HhCCc-EEECCCCcc--------------CeEEEeeEEEcCCeEEEEE--CCCCChHHHHHHHHHHH
Confidence              43333 44543 344433211              33333333221   22333  47889988777655444

>PRK06932 glycerate dehydrogenase; Provisional

Probab=97.92  E-value=1.7e-05  Score=78.39  Aligned_cols=136  Identities=20%  Similarity=0.223  Sum_probs=90.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------CCHhhhccCCCEEEEecCC----CCcccCC---
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------KNPEQITSEADIVIAAAGV----ANLVRGS---  292 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------~~L~~~~~~ADIVIsAvG~----p~~I~~e---  292 (368)
                      .++.||++.|||.|.+ |+.+|.+|...|++|..+++..        .+|.+.+++||+|+..++.    -++|+.+   
T Consensus       143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~  221 (314)
T PRK06932        143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLA  221 (314)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHH
Confidence            4689999999999997 9999999999999998776432        2578999999999988872    3467665   


Q ss_pred             CcCCCcEEEEeecCCCCCCCCCCC--CCCcEE---Ecccchhh-------hh-----ccceEeccCCCcccHHHHHHHHH
Q 017679          293 WLKPGAVVLDVGTCPVDVSVDPSC--EYGYRL---MGDVCYEE-------AM-----RLASVITPVPGGVGPMTVAMLLS  355 (368)
Q Consensus       293 ~ik~gavVIDvg~n~~~~~~d~t~--~~~~kl---~GDVd~~~-------~~-----~~a~~iTPVPGGVGp~T~amLl~  355 (368)
                      .+|+|+++|++|--.+-+. +...  -..|++   .-||-..+       ..     --.-.+||=-||.-.-+..-+..
T Consensus       222 ~mk~ga~lIN~aRG~~Vde-~AL~~aL~~g~i~gAaLDV~~~EP~~~~~pl~~~~~~~pnvilTPHia~~t~e~~~~~~~  300 (314)
T PRK06932        222 LMKPTAFLINTGRGPLVDE-QALLDALENGKIAGAALDVLVKEPPEKDNPLIQAAKRLPNLLITPHIAWASDSAVTTLVN  300 (314)
T ss_pred             hCCCCeEEEECCCccccCH-HHHHHHHHcCCccEEEEecCCCCCCCCCChhhHhhcCCCCEEECCccccCcHHHHHHHHH
Confidence            5699999999997654310 0000  012233   34553221       00     11336788778776555555555


Q ss_pred             HHHHHHHHHh
Q 017679          356 NTLDSAKRAY  365 (368)
Q Consensus       356 N~v~a~~~~~  365 (368)
                      .+++..++++
T Consensus       301 ~~~~ni~~~~  310 (314)
T PRK06932        301 KVAQNIEEFV  310 (314)
T ss_pred             HHHHHHHHHH
Confidence            5555555443

>PRK06436 glycerate dehydrogenase; Provisional

Probab=97.92  E-value=2e-05  Score=77.62  Aligned_cols=81  Identities=19%  Similarity=0.317  Sum_probs=66.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC----CCcccC---
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRG---  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~----p~~I~~---  291 (368)
                      .++.||++.|||.|.+ |+.+|.+|...|++|..++++.         .++++.+++||+|+...+.    -++|..   
T Consensus       118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l  196 (303)
T PRK06436        118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML  196 (303)
T ss_pred             CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence            4789999999999986 9999999999999999988642         3678889999999998873    235654   


Q ss_pred             CCcCCCcEEEEeecCCCC
Q 017679          292 SWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       292 e~ik~gavVIDvg~n~~~  309 (368)
                      +.+|+|+++|++|.-...
T Consensus       197 ~~mk~ga~lIN~sRG~~v  214 (303)
T PRK06436        197 SLFRKGLAIINVARADVV  214 (303)
T ss_pred             hcCCCCeEEEECCCcccc
Confidence            356899999999976653

>PRK06487 glycerate dehydrogenase; Provisional

Probab=97.89  E-value=2.2e-05  Score=77.61  Aligned_cols=136  Identities=16%  Similarity=0.189  Sum_probs=89.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------CCHhhhccCCCEEEEecCC----CCcccCC---C
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------KNPEQITSEADIVIAAAGV----ANLVRGS---W  293 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------~~L~~~~~~ADIVIsAvG~----p~~I~~e---~  293 (368)
                      .++.||++.|||.|.+ |+.+|.+|...|++|...++..       .+|.+.+++||+|+..++.    -++|+.+   .
T Consensus       144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~  222 (317)
T PRK06487        144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELAL  222 (317)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhc
Confidence            3689999999999997 9999999999999998776542       2588999999999988873    3467665   5


Q ss_pred             cCCCcEEEEeecCCCCCCCCCC--CCCCcEEE---cccchhh-------hh---ccceEeccCCCcccHHHHHHHHHHHH
Q 017679          294 LKPGAVVLDVGTCPVDVSVDPS--CEYGYRLM---GDVCYEE-------AM---RLASVITPVPGGVGPMTVAMLLSNTL  358 (368)
Q Consensus       294 ik~gavVIDvg~n~~~~~~d~t--~~~~~kl~---GDVd~~~-------~~---~~a~~iTPVPGGVGp~T~amLl~N~v  358 (368)
                      +|+|+++|++|--.+-+. +..  .-..|++-   =||-..+       ..   --.-.+||=-||.-.-+..-+...++
T Consensus       223 mk~ga~lIN~aRG~vVde-~AL~~AL~~g~i~gAaLDVf~~EP~~~~~pl~~~~~pnvilTPHia~~t~e~~~~~~~~~~  301 (317)
T PRK06487        223 MKPGALLINTARGGLVDE-QALADALRSGHLGGAATDVLSVEPPVNGNPLLAPDIPRLIVTPHSAWGSREARQRIVGQLA  301 (317)
T ss_pred             CCCCeEEEECCCccccCH-HHHHHHHHcCCeeEEEeecCCCCCCCCCCchhhcCCCCEEECCccccCCHHHHHHHHHHHH
Confidence            689999999997654310 000  00123432   3442111       10   01235788777776655555555555


Q ss_pred             HHHHHHh
Q 017679          359 DSAKRAY  365 (368)
Q Consensus       359 ~a~~~~~  365 (368)
                      +..++++
T Consensus       302 ~ni~~~~  308 (317)
T PRK06487        302 ENARAFF  308 (317)
T ss_pred             HHHHHHH
Confidence            5554443

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=97.88  E-value=2.9e-05  Score=76.64  Aligned_cols=80  Identities=29%  Similarity=0.351  Sum_probs=67.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC----CCcccCC--
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRGS--  292 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~----p~~I~~e--  292 (368)
                      .++.||++.|||.|.+ |+.+|.+|..-|++|..+++..         .++.+.+++||+|+..++.    -++|..+  
T Consensus       141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~  219 (311)
T PRK08410        141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKEL  219 (311)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHH
Confidence            4689999999999997 9999999999999999887642         2678999999999988872    2467655  


Q ss_pred             -CcCCCcEEEEeecCCC
Q 017679          293 -WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       293 -~ik~gavVIDvg~n~~  308 (368)
                       .+|+|+++|.+|--.+
T Consensus       220 ~~Mk~~a~lIN~aRG~v  236 (311)
T PRK08410        220 KLLKDGAILINVGRGGI  236 (311)
T ss_pred             HhCCCCeEEEECCCccc
Confidence             5699999999997665

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=97.87  E-value=3.5e-05  Score=76.41  Aligned_cols=75  Identities=19%  Similarity=0.271  Sum_probs=62.8

Q ss_pred             ccceEEEEccCccchHHHHHHHh-hCC-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQ-RHH-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~-~~g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      ..++++|||+|+. |+..+..|. .++ .+|++++|+.                     .++++.+++|||||++|+.+.
T Consensus       128 ~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~  206 (326)
T TIGR02992       128 DSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSET  206 (326)
T ss_pred             CCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCC
Confidence            5789999999997 999998886 466 4799998762                     245667899999999999776


Q ss_pred             c-ccCCCcCCCcEEEEeecC
Q 017679          288 L-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       288 ~-I~~e~ik~gavVIDvg~n  306 (368)
                      . ++.+|+++|+.|.++|.+
T Consensus       207 p~i~~~~l~~g~~i~~vg~~  226 (326)
T TIGR02992       207 PILHAEWLEPGQHVTAMGSD  226 (326)
T ss_pred             cEecHHHcCCCcEEEeeCCC
Confidence            5 789999999999999965

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK08605 D-lactate dehydrogenase; Validated

Probab=97.85  E-value=3.8e-05  Score=76.44  Aligned_cols=81  Identities=22%  Similarity=0.291  Sum_probs=64.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHH-hhCCCEEEEEeCCC-----------CCHhhhccCCCEEEEecCC----CCccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLL-QRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGV----ANLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL-~~~gAtVti~h~~t-----------~~L~~~~~~ADIVIsAvG~----p~~I~  290 (368)
                      +.++.|++|.|||.|.+ |+.+|..| ...|++|...+++.           .++.+.+++||+|+.+++.    .+++.
T Consensus       141 ~~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~  219 (332)
T PRK08605        141 SRSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFN  219 (332)
T ss_pred             cceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcC
Confidence            34689999999999986 99999999 56788998887532           3688899999999999874    23454


Q ss_pred             C---CCcCCCcEEEEeecCCC
Q 017679          291 G---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~  308 (368)
                      .   +.+|+|+++||++.-..
T Consensus       220 ~~~l~~mk~gailIN~sRG~~  240 (332)
T PRK08605        220 ADLFKHFKKGAVFVNCARGSL  240 (332)
T ss_pred             HHHHhcCCCCcEEEECCCCcc
Confidence            3   46799999999997654

>PRK07574 formate dehydrogenase; Provisional

Probab=97.84  E-value=2.2e-05  Score=79.82  Aligned_cols=135  Identities=15%  Similarity=0.183  Sum_probs=90.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC-C---Ccc
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV-A---NLV  289 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~-p---~~I  289 (368)
                      .++.||+|.|||.|.+ |+.+|..|...|++|..++++.              .++++.+++||+|+..++. +   +++
T Consensus       188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li  266 (385)
T PRK07574        188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF  266 (385)
T ss_pred             eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence            4689999999999987 9999999999999999988652              3577889999999999873 2   356


Q ss_pred             cCC---CcCCCcEEEEeecCCCCCCC---CCCCCCCcE---EEcccchhhhh--c------cceEeccCCCcccHHHHHH
Q 017679          290 RGS---WLKPGAVVLDVGTCPVDVSV---DPSCEYGYR---LMGDVCYEEAM--R------LASVITPVPGGVGPMTVAM  352 (368)
Q Consensus       290 ~~e---~ik~gavVIDvg~n~~~~~~---d~t~~~~~k---l~GDVd~~~~~--~------~a~~iTPVPGGVGp~T~am  352 (368)
                      ..+   .+|+|+++|+++.-.+-+..   +..  ..|+   ...||=+.+=.  +      -.-.+||=-+|.-.=+..-
T Consensus       267 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL--~sG~i~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~T~e~~~~  344 (385)
T PRK07574        267 DADVLSRMKRGSYLVNTARGKIVDRDAVVRAL--ESGHLAGYAGDVWFPQPAPADHPWRTMPRNGMTPHISGTTLSAQAR  344 (385)
T ss_pred             CHHHHhcCCCCcEEEECCCCchhhHHHHHHHH--HhCCccEEEEecCCCCCCCCCChHHhCCCeEECCccccCcHHHHHH
Confidence            554   46999999999976543100   000  0123   34677433210  0      1336888778766555544


Q ss_pred             HHHHHHHHHHHHh
Q 017679          353 LLSNTLDSAKRAY  365 (368)
Q Consensus       353 Ll~N~v~a~~~~~  365 (368)
                      +...+++..++++
T Consensus       345 ~~~~~~~ni~~~~  357 (385)
T PRK07574        345 YAAGTREILECFF  357 (385)
T ss_pred             HHHHHHHHHHHHH
Confidence            4444555444443

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=97.84  E-value=3.5e-05  Score=76.17  Aligned_cols=80  Identities=13%  Similarity=0.101  Sum_probs=65.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCC-C---CcccC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLVRG  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~-p---~~I~~  291 (368)
                      .+++||+|.|||.|.+ |+.+|..|...|++|+.++++.            .++.+.+++||+|+...+. +   ++|..
T Consensus       132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~  210 (312)
T PRK15469        132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIINQ  210 (312)
T ss_pred             CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhHH
Confidence            4689999999999987 9999999999999998887542            2578889999999998873 2   24554


Q ss_pred             ---CCcCCCcEEEEeecCCC
Q 017679          292 ---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 ---e~ik~gavVIDvg~n~~  308 (368)
                         +.+|+|+++|++|--.+
T Consensus       211 ~~l~~mk~ga~lIN~aRG~v  230 (312)
T PRK15469        211 QLLEQLPDGAYLLNLARGVH  230 (312)
T ss_pred             HHHhcCCCCcEEEECCCccc
Confidence               35689999999997654

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=97.83  E-value=3.1e-05  Score=77.15  Aligned_cols=80  Identities=20%  Similarity=0.317  Sum_probs=65.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------CCHhhhccCCCEEEEecCCC----CcccC--
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGVA----NLVRG--  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------~~L~~~~~~ADIVIsAvG~p----~~I~~--  291 (368)
                      .++.|++|.|||.|.+ |+++|.+|...|++|+.++++.          .++.+.+++||+|+.+++..    +++..  
T Consensus       142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~  220 (330)
T PRK12480        142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAM  220 (330)
T ss_pred             cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHH
Confidence            4689999999999986 9999999999999999988642          36788899999999999853    23443  


Q ss_pred             -CCcCCCcEEEEeecCCC
Q 017679          292 -SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 -e~ik~gavVIDvg~n~~  308 (368)
                       ..+++|+++|++|--.+
T Consensus       221 l~~mk~gavlIN~aRG~~  238 (330)
T PRK12480        221 FDHVKKGAILVNAARGAV  238 (330)
T ss_pred             HhcCCCCcEEEEcCCccc
Confidence             34689999999997654

>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]

Probab=97.82  E-value=3.8e-05  Score=75.62  Aligned_cols=85  Identities=26%  Similarity=0.393  Sum_probs=72.3

Q ss_pred             HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCccc
Q 017679          224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVR  290 (368)
Q Consensus       224 ~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~I~  290 (368)
                      +...+-+.||.+||.|.|.+ |+..|..|...|+.|+|..-..             -.+++.++++||+|++||..+.|.
T Consensus       206 raTDvM~aGKv~Vv~GYGdV-GKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~  284 (434)
T KOG1370|consen  206 RATDVMIAGKVAVVCGYGDV-GKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIIT  284 (434)
T ss_pred             hhhhheecccEEEEeccCcc-chhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhh
Confidence            34567789999999999985 9999999999999999986543             247799999999999999999988


Q ss_pred             CCCc---CCCcEEEEeecCCCC
Q 017679          291 GSWL---KPGAVVLDVGTCPVD  309 (368)
Q Consensus       291 ~e~i---k~gavVIDvg~n~~~  309 (368)
                      .+++   |.+++|.++|+.-.|
T Consensus       285 ~~H~~~mk~d~IvCN~Ghfd~E  306 (434)
T KOG1370|consen  285 GEHFDQMKNDAIVCNIGHFDTE  306 (434)
T ss_pred             HHHHHhCcCCcEEeccccccce
Confidence            7765   779999999987544

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=97.81  E-value=4e-05  Score=76.28  Aligned_cols=138  Identities=22%  Similarity=0.285  Sum_probs=92.0

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCC----CCc
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANL  288 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~----p~~  288 (368)
                      .+.++.||++-|||.|.+ |+.++..|...|++|..+++..             .+|.+.+++||||+.-++.    -++
T Consensus       136 ~g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~  214 (324)
T COG0111         136 RGTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGL  214 (324)
T ss_pred             ccccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcc
Confidence            356889999999999997 9999999999999999998743             3588999999999988873    346


Q ss_pred             ccCC---CcCCCcEEEEeecCCCCCCCCCC--CCCCcEEEc---ccchhh-------hhc-cceEeccCCCcccHHHHHH
Q 017679          289 VRGS---WLKPGAVVLDVGTCPVDVSVDPS--CEYGYRLMG---DVCYEE-------AMR-LASVITPVPGGVGPMTVAM  352 (368)
Q Consensus       289 I~~e---~ik~gavVIDvg~n~~~~~~d~t--~~~~~kl~G---DVd~~~-------~~~-~a~~iTPVPGGVGp~T~am  352 (368)
                      |+.+   .+|+|+++|.++--.+-+. +..  .-+.|++-|   ||-.++       ..+ -.-.+||=-||.---+...
T Consensus       215 i~~~~~a~MK~gailIN~aRG~vVde-~aL~~AL~~G~i~gA~lDVf~~EPl~~~~pL~~~pnV~~TPHia~~T~ea~~~  293 (324)
T COG0111         215 INAEELAKMKPGAILINAARGGVVDE-DALLAALDSGKIAGAALDVFEEEPLPADSPLWDLPNVILTPHIGGSTDEAQER  293 (324)
T ss_pred             cCHHHHhhCCCCeEEEECCCcceecH-HHHHHHHHcCCcceEEecCCCCCCCCCCChhhcCCCeEECCcccccCHHHHHH
Confidence            7655   4689999999987654210 000  000123221   332222       001 1235688888887655555


Q ss_pred             HHHHHHHHHHHHh
Q 017679          353 LLSNTLDSAKRAY  365 (368)
Q Consensus       353 Ll~N~v~a~~~~~  365 (368)
                      +...+++...+++
T Consensus       294 ~~~~~~~~i~~~l  306 (324)
T COG0111         294 VAEIVAENIVRYL  306 (324)
T ss_pred             HHHHHHHHHHHHH
Confidence            6555555555443

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=97.76  E-value=5e-05  Score=75.43  Aligned_cols=136  Identities=17%  Similarity=0.176  Sum_probs=89.7

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHh-hCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCC-C---Ccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLV  289 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~-~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~-p---~~I  289 (368)
                      +.+|.||++.|||.|.+ |+.+|..|. ..|++|...++..            .++.+.+++||+|+..++. |   ++|
T Consensus       140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li  218 (323)
T PRK15409        140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF  218 (323)
T ss_pred             cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence            45799999999999997 999999997 8899998776542            2578899999999988873 3   467


Q ss_pred             cCC---CcCCCcEEEEeecCCCCCCC---CCCCCCCcEEEc---ccchhhh--------hccceEeccCCCcccHHHHHH
Q 017679          290 RGS---WLKPGAVVLDVGTCPVDVSV---DPSCEYGYRLMG---DVCYEEA--------MRLASVITPVPGGVGPMTVAM  352 (368)
Q Consensus       290 ~~e---~ik~gavVIDvg~n~~~~~~---d~t~~~~~kl~G---DVd~~~~--------~~~a~~iTPVPGGVGp~T~am  352 (368)
                      ..+   .+|+|+++|+++--.+-+..   +..  ..|++.|   ||-..+=        .-..-.+||=-||.-.=+..-
T Consensus       219 ~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL--~~g~i~gAaLDVf~~EP~~~~~pL~~~~nvilTPHia~~t~e~~~~  296 (323)
T PRK15409        219 GAEQFAKMKSSAIFINAGRGPVVDENALIAAL--QKGEIHAAGLDVFEQEPLSVDSPLLSLPNVVAVPHIGSATHETRYN  296 (323)
T ss_pred             CHHHHhcCCCCeEEEECCCccccCHHHHHHHH--HcCCeeEEEeecCCCCCCCCCchhhcCCCEEEcCcCCCCcHHHHHH
Confidence            654   56899999999976543100   000  1234543   5532220        011336788778765444444


Q ss_pred             HHHHHHHHHHHHh
Q 017679          353 LLSNTLDSAKRAY  365 (368)
Q Consensus       353 Ll~N~v~a~~~~~  365 (368)
                      +...+++...+++
T Consensus       297 ~~~~~~~ni~~~~  309 (323)
T PRK15409        297 MAACAVDNLIDAL  309 (323)
T ss_pred             HHHHHHHHHHHHH
Confidence            4555555544443

>PLN02306 hydroxypyruvate reductase

Probab=97.75  E-value=5.2e-05  Score=77.14  Aligned_cols=81  Identities=21%  Similarity=0.320  Sum_probs=65.1

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHh-hCCCEEEEEeCC----------------------------CCCHhhhccCCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHAL----------------------------TKNPEQITSEAD  277 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~-~~gAtVti~h~~----------------------------t~~L~~~~~~AD  277 (368)
                      +.++.||++.|||.|.+ |+.+|.+|. ..|++|..++++                            ..+|.+.+++||
T Consensus       160 g~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sD  238 (386)
T PLN02306        160 GNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREAD  238 (386)
T ss_pred             CcCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCC
Confidence            34689999999999997 999999985 889999877642                            136888999999


Q ss_pred             EEEEecCC----CCcccCC---CcCCCcEEEEeecCCC
Q 017679          278 IVIAAAGV----ANLVRGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       278 IVIsAvG~----p~~I~~e---~ik~gavVIDvg~n~~  308 (368)
                      ||+..++.    .++|+.+   ++|+|+++|++|--.+
T Consensus       239 iV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~l  276 (386)
T PLN02306        239 VISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPV  276 (386)
T ss_pred             EEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccc
Confidence            99988762    3467655   5699999999996554

>PRK08291 ectoine utilization protein EutC; Validated

Probab=97.74  E-value=0.00011  Score=72.98  Aligned_cols=89  Identities=18%  Similarity=0.254  Sum_probs=68.3

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC---------------------CCHhh
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT---------------------KNPEQ  271 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t---------------------~~L~~  271 (368)
                      .+.+++....-.  ....++++|||+|+. |+..+..|.. ++ .+|++++|+.                     .++++
T Consensus       117 ~a~~~~a~~~la--~~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~  193 (330)
T PRK08291        117 AAAGAVAARHLA--REDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHE  193 (330)
T ss_pred             HHHHHHHHHHhC--CCCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHH
Confidence            336666655321  345689999999997 9998777774 55 4799998762                     34567


Q ss_pred             hccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          272 ITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      .+++|||||+||+.... ++.+|+++|+.|+.+|.+
T Consensus       194 al~~aDiVi~aT~s~~p~i~~~~l~~g~~v~~vg~d  229 (330)
T PRK08291        194 AVAGADIIVTTTPSEEPILKAEWLHPGLHVTAMGSD  229 (330)
T ss_pred             HHccCCEEEEeeCCCCcEecHHHcCCCceEEeeCCC
Confidence            78999999999997665 789999999999999875

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.72  E-value=2.7e-05  Score=69.81  Aligned_cols=77  Identities=26%  Similarity=0.354  Sum_probs=56.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------------CCH
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------------KNP  269 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------------~~L  269 (368)
                      +..++|+|+|.|. ||+..+.+|...|++|++.+...                                        ..+
T Consensus        18 ~~p~~vvv~G~G~-vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f   96 (168)
T PF01262_consen   18 VPPAKVVVTGAGR-VGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF   96 (168)
T ss_dssp             E-T-EEEEESTSH-HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred             CCCeEEEEECCCH-HHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence            5678999999887 59999999999999999997531                                        135


Q ss_pred             hhhccCCCEEEEec-----CCCCcccCCCc---CCCcEEEEeecCC
Q 017679          270 EQITSEADIVIAAA-----GVANLVRGSWL---KPGAVVLDVGTCP  307 (368)
Q Consensus       270 ~~~~~~ADIVIsAv-----G~p~~I~~e~i---k~gavVIDvg~n~  307 (368)
                      .+.++.+|+||++.     ..|.+|+.+++   ++|.+|+|+....
T Consensus        97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~  142 (168)
T PF01262_consen   97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ  142 (168)
T ss_dssp             HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred             HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence            57889999999655     24778988875   7899999998753

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PLN03139 formate dehydrogenase; Provisional

Probab=97.66  E-value=8.8e-05  Score=75.52  Aligned_cols=136  Identities=15%  Similarity=0.213  Sum_probs=90.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCC----Ccc
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVA----NLV  289 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p----~~I  289 (368)
                      .++.||+|.|||.|.+ |+.++..|...|++|..+++..              .++.+.++++|+|+..++..    ++|
T Consensus       195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li  273 (386)
T PLN03139        195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF  273 (386)
T ss_pred             cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence            4799999999999986 9999999999999998887541              26788999999999988732    246


Q ss_pred             cCC---CcCCCcEEEEeecCCCCCCCCCC--CCCCcEE---Ecccchhhhhc--------cceEeccCCCcccHHHHHHH
Q 017679          290 RGS---WLKPGAVVLDVGTCPVDVSVDPS--CEYGYRL---MGDVCYEEAMR--------LASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       290 ~~e---~ik~gavVIDvg~n~~~~~~d~t--~~~~~kl---~GDVd~~~~~~--------~a~~iTPVPGGVGp~T~amL  353 (368)
                      +.+   .+|+|+++|+++--.+-+. +..  .-..|++   ..||=+.+=..        -.-.+||=-||.-.-+..-+
T Consensus       274 ~~~~l~~mk~ga~lIN~aRG~iVDe-~AL~~AL~sG~l~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~t~~~~~r~  352 (386)
T PLN03139        274 NKERIAKMKKGVLIVNNARGAIMDT-QAVADACSSGHIGGYGGDVWYPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRY  352 (386)
T ss_pred             CHHHHhhCCCCeEEEECCCCchhhH-HHHHHHHHcCCceEEEEcCCCCCCCCCCChhhcCCCeEEcccccccCHHHHHHH
Confidence            554   4689999999997654310 000  0012333   46775433111        13467887777655444444


Q ss_pred             HHHHHHHHHHHh
Q 017679          354 LSNTLDSAKRAY  365 (368)
Q Consensus       354 l~N~v~a~~~~~  365 (368)
                      ...+++..++|+
T Consensus       353 ~~~~~~nl~~~~  364 (386)
T PLN03139        353 AAGVKDMLDRYF  364 (386)
T ss_pred             HHHHHHHHHHHH
Confidence            444555444444

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=97.65  E-value=8.5e-05  Score=76.07  Aligned_cols=81  Identities=22%  Similarity=0.367  Sum_probs=67.0

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------CCHhhhccCCCEEEEecCC----CCcccCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV----ANLVRGS  292 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------~~L~~~~~~ADIVIsAvG~----p~~I~~e  292 (368)
                      +.+|.||++.|||.|.+ |+.+|..|...|++|..++++.          .++.+.+++||+|+..++.    -++|..+
T Consensus       146 ~~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~  224 (409)
T PRK11790        146 SFEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAE  224 (409)
T ss_pred             cccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHH
Confidence            35799999999999997 9999999999999999887542          2688999999999988873    2367654


Q ss_pred             ---CcCCCcEEEEeecCCC
Q 017679          293 ---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       293 ---~ik~gavVIDvg~n~~  308 (368)
                         .+|+|+++|+++--.+
T Consensus       225 ~l~~mk~ga~lIN~aRG~~  243 (409)
T PRK11790        225 ELALMKPGAILINASRGTV  243 (409)
T ss_pred             HHhcCCCCeEEEECCCCcc
Confidence               5689999999995543

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.64  E-value=7.8e-05  Score=66.71  Aligned_cols=59  Identities=22%  Similarity=0.253  Sum_probs=47.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCH--------------hhhccCCCEEEEecCCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP--------------EQITSEADIVIAAAGVAN  287 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L--------------~~~~~~ADIVIsAvG~p~  287 (368)
                      ++++||+|+|||.|.+ |.-.+..|++.|++|+++...- +++              ++.+.+||+||.||+.+.
T Consensus         9 l~l~~~~vlVvGGG~v-a~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e   82 (157)
T PRK06719          9 FNLHNKVVVIIGGGKI-AYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHA   82 (157)
T ss_pred             EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHH
Confidence            6899999999998875 9999999999999999985331 111              123688999999998765

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=97.63  E-value=0.00011  Score=77.58  Aligned_cols=81  Identities=19%  Similarity=0.309  Sum_probs=66.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCC----CCcc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANLV  289 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~----p~~I  289 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|..++++.             .++.+.+++||+|+..++.    -++|
T Consensus       133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li  211 (525)
T TIGR01327       133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI  211 (525)
T ss_pred             ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence            45799999999999987 9999999999999999987631             3688999999999998873    2356


Q ss_pred             cCC---CcCCCcEEEEeecCCC
Q 017679          290 RGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       290 ~~e---~ik~gavVIDvg~n~~  308 (368)
                      ..+   .+|+|+++||++.-.+
T Consensus       212 ~~~~l~~mk~ga~lIN~aRG~~  233 (525)
T TIGR01327       212 GAEELAKMKKGVIIVNCARGGI  233 (525)
T ss_pred             CHHHHhcCCCCeEEEEcCCCce
Confidence            443   5689999999997665

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=97.61  E-value=0.00026  Score=70.14  Aligned_cols=75  Identities=17%  Similarity=0.191  Sum_probs=61.1

Q ss_pred             ccceEEEEccCccchHHHHHHHh-hCCC-EEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQ-RHHA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~-~~gA-tVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      ..++++|||.|+. |+..+..++ .++. +|++++++.                     .++++.+++||+||++|+.++
T Consensus       126 ~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~  204 (325)
T PRK08618        126 DAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKT  204 (325)
T ss_pred             CCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCC
Confidence            5789999999997 988876664 4564 799988752                     245677899999999999887


Q ss_pred             c-ccCCCcCCCcEEEEeecCC
Q 017679          288 L-VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 ~-I~~e~ik~gavVIDvg~n~  307 (368)
                      . +. +|+++|+.|+-+|.+.
T Consensus       205 p~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        205 PVFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             cchH-HhcCCCcEEEecCCCC
Confidence            6 68 9999999999999753

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.60  E-value=8.5e-05  Score=66.14  Aligned_cols=74  Identities=22%  Similarity=0.350  Sum_probs=55.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cc-c---
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-R---  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I-~---  290 (368)
                      ++|-+||-|.. |.+++..|.+.|.+|++++++.              .++.+.++++|+||+++..+.    .+ .   
T Consensus         2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            58999999986 9999999999999999999873              467788999999999998643    12 3   


Q ss_pred             CCCcCCCcEEEEeecCC
Q 017679          291 GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       291 ~e~ik~gavVIDvg~n~  307 (368)
                      ...+++|.++||+++..
T Consensus        81 ~~~l~~g~iiid~sT~~   97 (163)
T PF03446_consen   81 LAGLRPGKIIIDMSTIS   97 (163)
T ss_dssp             GGGS-TTEEEEE-SS--
T ss_pred             hhccccceEEEecCCcc
Confidence            24567899999999754

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06141 ornithine cyclodeaminase; Validated

Probab=97.58  E-value=0.00028  Score=69.67  Aligned_cols=77  Identities=25%  Similarity=0.317  Sum_probs=59.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      ....+++.|||.|.. |++.+..+.. ++ .+|++++|+.                    .++++.+++|||||++|+.+
T Consensus       122 ~~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~  200 (314)
T PRK06141        122 RKDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST  200 (314)
T ss_pred             CCCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence            457899999999986 9999875543 44 6899998752                    23556788999999999987


Q ss_pred             Cc-ccCCCcCCCcEEEEeecC
Q 017679          287 NL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       287 ~~-I~~e~ik~gavVIDvg~n  306 (368)
                      .. ++.+|+++|+.|.=+|.+
T Consensus       201 ~pvl~~~~l~~g~~i~~ig~~  221 (314)
T PRK06141        201 EPLVRGEWLKPGTHLDLVGNF  221 (314)
T ss_pred             CCEecHHHcCCCCEEEeeCCC
Confidence            76 788999999954445543

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=97.57  E-value=0.00014  Score=76.62  Aligned_cols=81  Identities=20%  Similarity=0.333  Sum_probs=66.8

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCCC----Cccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~p----~~I~  290 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|..++++.            .++.+.+++||+|+.+++..    +++.
T Consensus       135 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~  213 (526)
T PRK13581        135 GVELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIG  213 (526)
T ss_pred             ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcC
Confidence            35689999999999987 9999999999999999987632            15778899999999998843    4565


Q ss_pred             CC---CcCCCcEEEEeecCCC
Q 017679          291 GS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~e---~ik~gavVIDvg~n~~  308 (368)
                      .+   .+|+|+++|+++.-.+
T Consensus       214 ~~~l~~mk~ga~lIN~aRG~~  234 (526)
T PRK13581        214 AEELAKMKPGVRIINCARGGI  234 (526)
T ss_pred             HHHHhcCCCCeEEEECCCCce
Confidence            43   5689999999997654

>PRK07340 ornithine cyclodeaminase; Validated

Probab=97.52  E-value=0.00053  Score=67.48  Aligned_cols=78  Identities=15%  Similarity=0.135  Sum_probs=63.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhh-CCC-EEEEEeCCC-------------------CCHhhhccCCCEEEEecCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT-------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~-~gA-tVti~h~~t-------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      -....++++|||.|.. |+..+..+.. ++. +|.+++++.                   .++++.+++|||||++|+.+
T Consensus       121 a~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~  199 (304)
T PRK07340        121 APAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSR  199 (304)
T ss_pred             CCCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCC
Confidence            3457899999999987 9999988864 554 799998752                   24667889999999999988


Q ss_pred             Cc-ccCCCcCCCcEEEEeecCC
Q 017679          287 NL-VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       287 ~~-I~~e~ik~gavVIDvg~n~  307 (368)
                      +. +.. |+|||+.|.=+|.+.
T Consensus       200 ~Pl~~~-~~~~g~hi~~iGs~~  220 (304)
T PRK07340        200 TPVYPE-AARAGRLVVAVGAFT  220 (304)
T ss_pred             CceeCc-cCCCCCEEEecCCCC
Confidence            76 565 899999999999653

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=97.52  E-value=0.00011  Score=60.97  Aligned_cols=60  Identities=25%  Similarity=0.372  Sum_probs=46.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------CCHhhhccCCCEEEEecCCCCc
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------~~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      ++++||+|+|||.|.. |..-+..|++.||+||++....           ..+++.+..+|+||.|++.+.+
T Consensus         3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~~   73 (103)
T PF13241_consen    3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPEL   73 (103)
T ss_dssp             E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HHH
T ss_pred             EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHHH
Confidence            4789999999998875 9999999999999999998762           3456778899999999987653

>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []

Probab=97.52  E-value=0.00011  Score=58.94  Aligned_cols=68  Identities=13%  Similarity=0.236  Sum_probs=49.8

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCcce
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPLN  198 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~N  198 (368)
                      .++++.++++|++..|..++.  .++++.+.++.+.. +++.|++|++|++     +++++.+|. +..+.-+..+|
T Consensus        13 ~~hn~~f~~~g~~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~~VT~P~K-----~~~~~~~D~~~~~A~~igAvN   81 (83)
T PF08501_consen   13 LIHNAAFEALGLDAVYIPFEV--EPEDLEDFLDALRA-PNFRGLNVTMPHK-----EAAIPYLDELSPSAKAIGAVN   81 (83)
T ss_dssp             HHHHHHHHHTTSSEEEEEEET--STTCHHHHHHHHHH-TTESEEEE-TTST-----THHGGGSSEE-HHHHHHTS-S
T ss_pred             HHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHhc-CCCCeeeecchHH-----HHHHHHhccCCHHHHHhCCcc
Confidence            478999999999999999855  56678888888887 7899999999999     456666654 33333334444

Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=97.48  E-value=0.0002  Score=71.40  Aligned_cols=81  Identities=21%  Similarity=0.356  Sum_probs=67.3

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecC-C---CCccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAG-V---ANLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG-~---p~~I~  290 (368)
                      +.++.||++-|||.|.+ |+.+|+.|..-|++|...+++.            -++.+.+++||+|+...+ .   -|+|.
T Consensus       141 ~~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin  219 (324)
T COG1052         141 GFDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLIN  219 (324)
T ss_pred             ccCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcC
Confidence            35789999999999997 9999999998899999888663            137799999999998887 2   34676


Q ss_pred             CC---CcCCCcEEEEeecCCC
Q 017679          291 GS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~e---~ik~gavVIDvg~n~~  308 (368)
                      .+   .+|+|+++|.+|--.+
T Consensus       220 ~~~l~~mk~ga~lVNtaRG~~  240 (324)
T COG1052         220 AEELAKMKPGAILVNTARGGL  240 (324)
T ss_pred             HHHHHhCCCCeEEEECCCccc
Confidence            65   5689999999997654

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.47  E-value=0.0003  Score=74.05  Aligned_cols=90  Identities=23%  Similarity=0.315  Sum_probs=67.2

Q ss_pred             HHHHHHHHHhCC----------CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------
Q 017679          217 KGCIELLIRSGV----------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------  267 (368)
Q Consensus       217 ~gv~~lL~~~~i----------~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------  267 (368)
                      .|+++..++++.          ...|.+|+|+|+|.+ |...+..+...||.|+++..+..                   
T Consensus       140 ~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e  218 (509)
T PRK09424        140 RAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEE  218 (509)
T ss_pred             HHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEecccc
Confidence            677777776653          346999999999876 99999999999999888865410                   


Q ss_pred             --------------C--------HhhhccCCCEEEEecCCCC-----cccCCC---cCCCcEEEEeecCC
Q 017679          268 --------------N--------PEQITSEADIVIAAAGVAN-----LVRGSW---LKPGAVVLDVGTCP  307 (368)
Q Consensus       268 --------------~--------L~~~~~~ADIVIsAvG~p~-----~I~~e~---ik~gavVIDvg~n~  307 (368)
                                    +        +.+.++.+|+||.++|.|.     +++.++   +|+|.+|+|+|..+
T Consensus       219 ~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~  288 (509)
T PRK09424        219 EGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAEN  288 (509)
T ss_pred             ccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCC
Confidence                          1        0122357999999999644     565554   58999999999853

>PRK12862 malic enzyme; Reviewed

Probab=97.38  E-value=0.00083  Score=73.90  Aligned_cols=172  Identities=13%  Similarity=0.150  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcc
Q 017679          119 QTYVRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPL  197 (368)
Q Consensus       119 ~~Yv~~k~k~a~~~G-I~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~  197 (368)
                      .--...|.-.++.+| |++.-+.+... +.+|+.+.++.+-  |++-||++.=  -+.-+--+|++.+..+-|+-.||.-
T Consensus        94 ~pv~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~ED--~~~~~~f~i~~~~~~~~~ip~f~DD  168 (763)
T PRK12862         94 KPVMEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINLED--IKAPECFYIERELRERMKIPVFHDD  168 (763)
T ss_pred             cchHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeeeec--ccCchHHHHHHHHHhcCCCceEecC
Confidence            344456777676664 88666666543 7789999999887  7778877631  1112234455555544456655532


Q ss_pred             eeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC--------
Q 017679          198 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT--------  266 (368)
Q Consensus       198 N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t--------  266 (368)
                      .          .|---.+..|++..++-.+.+++..++++.|+|.+ |..++.+|...|.   ++++|+++-        
T Consensus       169 ~----------~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~  237 (763)
T PRK12862        169 Q----------HGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRTE  237 (763)
T ss_pred             c----------ccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCc
Confidence            2          23223456889999999999999999999999988 9999999999997   688997540        


Q ss_pred             ---------------CCHhhhccCCCEEEEecCCCCcccCCCcCC---CcEEEEeecCCC
Q 017679          267 ---------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV  308 (368)
Q Consensus       267 ---------------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~---gavVIDvg~n~~  308 (368)
                                     .+|.+.++.+|++|-..+ |+.+++||++.   .-+|+=++ ||.
T Consensus       238 ~l~~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~  295 (763)
T PRK12862        238 LMDPWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALA-NPT  295 (763)
T ss_pred             cccHHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCC-CCc
Confidence                           358899999999998777 89999999864   67887776 543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.38  E-value=0.00028  Score=71.89  Aligned_cols=110  Identities=22%  Similarity=0.231  Sum_probs=76.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC------------------------CCHhhhccCCCEEEEecCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT------------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t------------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      ++|+|||+|++ |+++|+.|++++ ..|++..|+-                        +.+.+.+++.|+||++.+...
T Consensus         2 ~~ilviGaG~V-g~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~   80 (389)
T COG1748           2 MKILVIGAGGV-GSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV   80 (389)
T ss_pred             CcEEEECCchh-HHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence            68999999885 999999999998 7999998762                        246688999999999997544


Q ss_pred             c--ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCC-cccHHHHHHHHHHHHH
Q 017679          288 L--VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMTVAMLLSNTLD  359 (368)
Q Consensus       288 ~--I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPG-GVGp~T~amLl~N~v~  359 (368)
                      -  +-...++-|.-++|+.+....            .   -++++..++|| +|-++| |+-|=-+..+...+++
T Consensus        81 ~~~i~ka~i~~gv~yvDts~~~~~------------~---~~~~~~a~~Ag-it~v~~~G~dPGi~nv~a~~a~~  139 (389)
T COG1748          81 DLTILKACIKTGVDYVDTSYYEEP------------P---WKLDEEAKKAG-ITAVLGCGFDPGITNVLAAYAAK  139 (389)
T ss_pred             hHHHHHHHHHhCCCEEEcccCCch------------h---hhhhHHHHHcC-eEEEcccCcCcchHHHHHHHHHH
Confidence            2  334467789999999876521            0   12233335666 445655 5556555555554443

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=97.35  E-value=0.00034  Score=70.00  Aligned_cols=81  Identities=17%  Similarity=0.341  Sum_probs=63.4

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhccCCCEEEEecCC----CCcc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGV----ANLV  289 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~~ADIVIsAvG~----p~~I  289 (368)
                      +.+++||+|.|+|.|.+ |+.+|..|..-|+.+.-+.|+..             ++.+.++++|+||.+..-    -|+|
T Consensus       157 g~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~li  235 (336)
T KOG0069|consen  157 GYDLEGKTVGILGLGRI-GKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLI  235 (336)
T ss_pred             cccccCCEEEEecCcHH-HHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHh
Confidence            56789999999999998 99999999998854444444322             677889999999988862    2356


Q ss_pred             cCC---CcCCCcEEEEeecCCC
Q 017679          290 RGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       290 ~~e---~ik~gavVIDvg~n~~  308 (368)
                      .++   ++|+|+++|.++--.+
T Consensus       236 Nk~~~~~mk~g~vlVN~aRG~i  257 (336)
T KOG0069|consen  236 NKKFIEKMKDGAVLVNTARGAI  257 (336)
T ss_pred             hHHHHHhcCCCeEEEecccccc
Confidence            554   6799999999986543

>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed

Probab=97.30  E-value=0.0017  Score=71.22  Aligned_cols=172  Identities=15%  Similarity=0.166  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcc
Q 017679          119 QTYVRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPL  197 (368)
Q Consensus       119 ~~Yv~~k~k~a~~~G-I~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~  197 (368)
                      .--...|.-.++.+| |++.-+.+... +.+|+.+.++.+-  |.+-||++.==  +.-+--+|++.+..+-|+-.||.-
T Consensus        86 ~pv~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~ED~--~~p~~f~i~~~~~~~~~ip~f~DD  160 (752)
T PRK07232         86 KPVMEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLEDI--KAPECFYIEEKLRERMDIPVFHDD  160 (752)
T ss_pred             ccHHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeeeec--CCchHHHHHHHHHHhcCCCeeccc
Confidence            444456777777765 88766666543 6789999998886  77888876411  112234455555444456665532


Q ss_pred             eeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC--------
Q 017679          198 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT--------  266 (368)
Q Consensus       198 N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t--------  266 (368)
                      .          .|---.+..|++..|+-.+.+++..++++.|+|-+ |..++.+|...|.   .+++|+++-        
T Consensus       161 ~----------~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~  229 (752)
T PRK07232        161 Q----------HGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRTE  229 (752)
T ss_pred             c----------chHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCcc
Confidence            2          22223455788999999999999999999999988 9999999999987   688987541        


Q ss_pred             ---------------CCHhhhccCCCEEEEecCCCCcccCCCcCC---CcEEEEeecCCC
Q 017679          267 ---------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV  308 (368)
Q Consensus       267 ---------------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~---gavVIDvg~n~~  308 (368)
                                     .+|.+.++.+|++|-..+ |+.+++||++.   ..+|+=++ ||.
T Consensus       230 ~~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~  287 (752)
T PRK07232        230 GMDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALA-NPD  287 (752)
T ss_pred             cccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecC-CCC
Confidence                           358899999999997776 89999999854   67888777 543

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.30  E-value=0.00053  Score=67.15  Aligned_cols=73  Identities=14%  Similarity=0.248  Sum_probs=59.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCHhhhccCCCEEEEecCCCCc---c---cCCCcCCCcEEEEe
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAGVANL---V---RGSWLKPGAVVLDV  303 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L~~~~~~ADIVIsAvG~p~~---I---~~e~ik~gavVIDv  303 (368)
                      ++++|.|||.|.. |.+++..|.+.|.+|++.+|+. .++.+.+++||+||.+++....   +   ....++++.+|||+
T Consensus         3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~~~~~v~~~l~~~~~~~~~ivi~~   81 (308)
T PRK14619          3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMKGVRPVAEQVQALNLPPETIIVTA   81 (308)
T ss_pred             CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChHHHHHHHHHHHHhcCCCCcEEEEe
Confidence            5678999999886 9999999999999999998764 5788889999999999986432   2   12236778999997


Q ss_pred             e
Q 017679          304 G  304 (368)
Q Consensus       304 g  304 (368)
                      .
T Consensus        82 s   82 (308)
T PRK14619         82 T   82 (308)
T ss_pred             C
Confidence            5

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.29  E-value=0.00044  Score=69.94  Aligned_cols=75  Identities=17%  Similarity=0.270  Sum_probs=59.0

Q ss_pred             ccceEEEEc-cCccchHHHHHHHhhCCCEEEEEeCCC-CCHhhhccCCCEEEEecCCCC---cccC-CCcCCCcEEEEee
Q 017679          231 MGKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAGVAN---LVRG-SWLKPGAVVLDVG  304 (368)
Q Consensus       231 ~GK~VvVIG-~g~~VGrpla~lL~~~gAtVti~h~~t-~~L~~~~~~ADIVIsAvG~p~---~I~~-e~ik~gavVIDvg  304 (368)
                      ..++|+||| .|. +|..++..|.+.|.+|+++.+.. .+..+.+++||+||.|++...   ++.. ..+++|++|+|+|
T Consensus        97 ~~~~I~IiGG~Gl-mG~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~~~~~~~~~l~~l~~~~iv~Dv~  175 (374)
T PRK11199         97 DLRPVVIVGGKGQ-LGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIHLTEEVIARLPPLPEDCILVDLT  175 (374)
T ss_pred             ccceEEEEcCCCh-hhHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHHHHHHHHHHHhCCCCCcEEEECC
Confidence            347899999 665 59999999999999999998754 356677899999999998533   2211 1178999999999


Q ss_pred             cC
Q 017679          305 TC  306 (368)
Q Consensus       305 ~n  306 (368)
                      ..
T Consensus       176 Sv  177 (374)
T PRK11199        176 SV  177 (374)
T ss_pred             Cc
Confidence            74

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=97.27  E-value=0.00051  Score=67.42  Aligned_cols=74  Identities=27%  Similarity=0.385  Sum_probs=59.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCc-----ccCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVANL-----VRGS  292 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~-----I~~e  292 (368)
                      .+|..||-|.. |.|+|..|.+.|..|++.+++.               .+..+.+++||+||+.++.+.-     +..+
T Consensus         1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~   79 (286)
T COG2084           1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN   79 (286)
T ss_pred             CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence            37899999986 9999999999999999999873               2345788999999999986542     2223


Q ss_pred             ----CcCCCcEEEEeecCC
Q 017679          293 ----WLKPGAVVLDVGTCP  307 (368)
Q Consensus       293 ----~ik~gavVIDvg~n~  307 (368)
                          ..++|.++||+.+..
T Consensus        80 g~~~~~~~G~i~IDmSTis   98 (286)
T COG2084          80 GLLEGLKPGAIVIDMSTIS   98 (286)
T ss_pred             chhhcCCCCCEEEECCCCC
Confidence                457899999999763

>COG0281 SfcA Malic enzyme [Energy production and conversion]

Probab=97.24  E-value=0.0014  Score=67.08  Aligned_cols=174  Identities=17%  Similarity=0.249  Sum_probs=126.0

Q ss_pred             ccHHHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccC
Q 017679          117 DSQTYVRNKIKACEEV-GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH  195 (368)
Q Consensus       117 aS~~Yv~~k~k~a~~~-GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~  195 (368)
                      ++.--...|.-.++++ ||++.-+++... +.+|+.+.++.+.  |.+-||+++-==.+  .-..+...+..+.|+--||
T Consensus        98 ag~pVmeGKa~Lfk~faGid~~pI~ld~~-~~~ei~~~Vkal~--p~FgginLedi~ap--~cf~ie~~lr~~~~IPvFh  172 (432)
T COG0281          98 AGKPVMEGKAVLFKAFAGIDVLPIELDVG-TNNEIIEFVKALE--PTFGGINLEDIDAP--RCFAIEERLRYRMNIPVFH  172 (432)
T ss_pred             cCcchhhhHHHHHHHhcCCCceeeEeeCC-ChHHHHHHHHHhh--hcCCCcceeecccc--hhhHHHHHHhhcCCCCccc
Confidence            4444556677777665 688888888654 5678999999997  57999999742111  1134455566677888777


Q ss_pred             cceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC------
Q 017679          196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT------  266 (368)
Q Consensus       196 ~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t------  266 (368)
                      .--.|-          ---|..|++..|+-.|.+|+..++++.|+|-+ |-.++.+|...|.   +|++|.|+-      
T Consensus       173 DDqqGT----------aiv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~r  241 (432)
T COG0281         173 DDQQGT----------AIVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDGR  241 (432)
T ss_pred             ccccHH----------HHHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCCC
Confidence            444321          12245788999999999999999999999988 9999999999996   699998751      


Q ss_pred             CCH-------------------hhhccCCCEEEEecCCCCcccCCCcCC---CcEEEEeecCCC
Q 017679          267 KNP-------------------EQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV  308 (368)
Q Consensus       267 ~~L-------------------~~~~~~ADIVIsAvG~p~~I~~e~ik~---gavVIDvg~n~~  308 (368)
                      .++                   .+.+..||++|...|. +.+++||++.   +.+|+=++ ||.
T Consensus       242 ~~~~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfala-NP~  303 (432)
T COG0281         242 EDLTMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALA-NPT  303 (432)
T ss_pred             cccccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecC-CCC
Confidence            010                   2346789999988877 8899998864   56777666 443

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.15  E-value=0.0013  Score=61.42  Aligned_cols=113  Identities=21%  Similarity=0.287  Sum_probs=70.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CH-----------------hhhccCCCEEEEecCCCCc-
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NP-----------------EQITSEADIVIAAAGVANL-  288 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L-----------------~~~~~~ADIVIsAvG~p~~-  288 (368)
                      ++++||+|+|||.|.+ |.--+..|++.||.||++..... ++                 .+.+..+|+||.|+|.+.+ 
T Consensus         5 l~l~gk~vlVvGgG~v-a~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         5 ANLEGRAVLVVGGGDV-ALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             EEcCCCeEEEECcCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHHHH
Confidence            5789999999998774 99999999999999999965431 11                 2346789999999997642 


Q ss_pred             --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHHHHHHHHH
Q 017679          289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTL  358 (368)
Q Consensus       289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~amLl~N~v  358 (368)
                        +-.+.-+.|..| ++.-++..              +|+-|....+.   .-+|+  -||-.|..+..|-+++-
T Consensus        84 ~~i~~~a~~~~ilv-n~~d~~e~--------------~~f~~pa~~~~g~l~iais--T~G~sP~la~~lr~~ie  141 (205)
T TIGR01470        84 RRVAHAARARGVPV-NVVDDPEL--------------CSFIFPSIVDRSPVVVAIS--SGGAAPVLARLLRERIE  141 (205)
T ss_pred             HHHHHHHHHcCCEE-EECCCccc--------------CeEEEeeEEEcCCEEEEEE--CCCCCcHHHHHHHHHHH
Confidence              222222335444 33322211              23333332221   12333  47888888777665543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK14804 ornithine carbamoyltransferase; Provisional

Probab=97.12  E-value=0.061  Score=53.41  Aligned_cols=148  Identities=17%  Similarity=0.170  Sum_probs=99.0

Q ss_pred             cccHHHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCcc
Q 017679          116 RDSQTYVRNKIKACEEVGIKSIVTEFADG-CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF  194 (368)
Q Consensus       116 ~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~-~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl  194 (368)
                      |...+- -.=..++.++|-++.++.-... ...+.+.+.++-|+.  .+|+|.+-.|  .|-....+.+.       ..+
T Consensus        53 pSTRTR-~SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~--~~~~~~~~a~~-------~~v  120 (311)
T PRK14804         53 TSTRTR-VSFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLK--KHEDLLVMKNG-------SQV  120 (311)
T ss_pred             CchhHH-HHHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCC--ChHHHHHHHHH-------CCC
Confidence            434443 3567899999999887754322 222334444666665  6899999865  33332222222       123


Q ss_pred             CcceeeeccccCCcCccccCCHHH-HHHHHHHhCC-CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------
Q 017679          195 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------  265 (368)
Q Consensus       195 ~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i-~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-------  265 (368)
                      -.+|.|       ...+.||=+.+ ++.+.++.|- +++|++|++||.++-|.+.++.++...|++|++++-.       
T Consensus       121 PVINag-------~~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~  193 (311)
T PRK14804        121 PVINGC-------DNMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIH  193 (311)
T ss_pred             CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHH
Confidence            445653       12467998888 4455555553 6999999999998888999999999999999998742       


Q ss_pred             ---------------CCCHhhhccCCCEEEEe
Q 017679          266 ---------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       266 ---------------t~~L~~~~~~ADIVIsA  282 (368)
                                     +.++++.++.||+|.+-
T Consensus       194 ~~~~~~~~~~g~i~~~~d~~~av~~aDvvy~d  225 (311)
T PRK14804        194 AQTVERAKKKGTLSWEMNLHKAVSHADYVYTD  225 (311)
T ss_pred             HHHHHHHHhcCCeEEEeCHHHHhCCCCEEEee
Confidence                           24567888999999873

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=97.08  E-value=0.00062  Score=63.94  Aligned_cols=116  Identities=22%  Similarity=0.290  Sum_probs=72.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-C-----------------CHhhhccCCCEEEEecCCCCc-
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K-----------------NPEQITSEADIVIAAAGVANL-  288 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~-----------------~L~~~~~~ADIVIsAvG~p~~-  288 (368)
                      ++++||+|+|||.|. ||.-=+.+|++.||+|+++.-.. +                 -..+.+..+++||.||+.+.+ 
T Consensus         8 ~~l~~k~VlvvGgG~-va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln   86 (210)
T COG1648           8 LDLEGKKVLVVGGGS-VALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELN   86 (210)
T ss_pred             EEcCCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHH
Confidence            578999999999877 59999999999999999985432 1                 112455669999999987653 


Q ss_pred             --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                        |-...=+.+ +.+++.-.+.              .+|+-|....++   .-+|+  -||-+|+.+.++.+..-...
T Consensus        87 ~~i~~~a~~~~-i~vNv~D~p~--------------~~~f~~Pa~~~r~~l~iaIs--T~G~sP~la~~ir~~Ie~~l  147 (210)
T COG1648          87 ERIAKAARERR-ILVNVVDDPE--------------LCDFIFPAIVDRGPLQIAIS--TGGKSPVLARLLREKIEALL  147 (210)
T ss_pred             HHHHHHHHHhC-CceeccCCcc--------------cCceecceeeccCCeEEEEE--CCCCChHHHHHHHHHHHHHc
Confidence              211111112 3333332221              134434443222   22332  48999999988887765443

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=97.07  E-value=0.00085  Score=59.49  Aligned_cols=69  Identities=26%  Similarity=0.382  Sum_probs=51.5

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------------CCCHhhhccCCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------------t~~L~~~~~~ADIVIsAvG~  285 (368)
                      ||+|||+|.. |.++|..|..+|.+|++..+.                            |.++++.+++||+||.+++.
T Consensus         1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs   79 (157)
T PF01210_consen    1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS   79 (157)
T ss_dssp             EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred             CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence            6899999987 999999999999999999764                            24788999999999999975


Q ss_pred             CCc---cc--CCCcCCCcEEEEe
Q 017679          286 ANL---VR--GSWLKPGAVVLDV  303 (368)
Q Consensus       286 p~~---I~--~e~ik~gavVIDv  303 (368)
                      -.+   ++  ..+++++..+|=+
T Consensus        80 ~~~~~~~~~l~~~l~~~~~ii~~  102 (157)
T PF01210_consen   80 QAHREVLEQLAPYLKKGQIIISA  102 (157)
T ss_dssp             GGHHHHHHHHTTTSHTT-EEEET
T ss_pred             HHHHHHHHHHhhccCCCCEEEEe
Confidence            432   21  3456778777654

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.05  E-value=0.0018  Score=66.89  Aligned_cols=132  Identities=20%  Similarity=0.181  Sum_probs=77.7

Q ss_pred             HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----CHhhhccCCCEEEEecCC-CCcccCCCcCCC
Q 017679          223 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----NPEQITSEADIVIAAAGV-ANLVRGSWLKPG  297 (368)
Q Consensus       223 L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----~L~~~~~~ADIVIsAvG~-p~~I~~e~ik~g  297 (368)
                      |.+.+.+++||+|+|||.|.+ |..+|..|.++|++|+++++...    .+.+.+++..+-+.. |. +.    .....+
T Consensus         7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~-~~~~~----~~~~~D   80 (480)
T PRK01438          7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRL-GPGPT----LPEDTD   80 (480)
T ss_pred             hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEE-CCCcc----ccCCCC
Confidence            567778899999999999986 99999999999999999986542    122334333332211 11 11    112234


Q ss_pred             cEEEEeecCCCCCCCCCCCCCCcEEEcccchh-hhhc---cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          298 AVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYE-EAMR---LASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       298 avVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~-~~~~---~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      .+|+-.|+++...........+-.+.|+.++- ...+   +.-.| -|-|=.|.-|+.-|+.++++.+
T Consensus        81 ~Vv~s~Gi~~~~~~~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I-~VTGTnGKTTTt~mi~~iL~~~  147 (480)
T PRK01438         81 LVVTSPGWRPDAPLLAAAADAGIPVWGEVELAWRLRDPDRPAPWL-AVTGTNGKTTTVQMLASMLRAA  147 (480)
T ss_pred             EEEECCCcCCCCHHHHHHHHCCCeecchHHHHHHhhhccCCCCEE-EEeCCCcHHHHHHHHHHHHHHc
Confidence            45555555543200000001133567777752 2211   11112 4557888999999999998764

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.05  E-value=0.0012  Score=63.90  Aligned_cols=72  Identities=19%  Similarity=0.309  Sum_probs=56.5

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cc-cC---
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-RG---  291 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I-~~---  291 (368)
                      +|.|||.|.+ |.+++..|++.|.+|++++++.              .+..+.++++|+||.+++...    .+ ..   
T Consensus         1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~   79 (291)
T TIGR01505         1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGI   79 (291)
T ss_pred             CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchH
Confidence            4789999886 9999999999999999998763              356678899999999998542    11 21   


Q ss_pred             -CCcCCCcEEEEeecC
Q 017679          292 -SWLKPGAVVLDVGTC  306 (368)
Q Consensus       292 -e~ik~gavVIDvg~n  306 (368)
                       ..+++|.++||.+..
T Consensus        80 ~~~~~~g~iivd~st~   95 (291)
T TIGR01505        80 IEGAKPGKTLVDMSSI   95 (291)
T ss_pred             hhcCCCCCEEEECCCC
Confidence             245789999998754

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=97.01  E-value=0.0015  Score=64.80  Aligned_cols=75  Identities=17%  Similarity=0.290  Sum_probs=58.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhh--CCCEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCCCc
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR--HHATVSIVHALT--------------------KNPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~--~gAtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      .-+++.|||.|.. |+..+..|..  ...+|.+++++.                    .+.++.+++|||||++|+....
T Consensus       127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P  205 (325)
T TIGR02371       127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP  205 (325)
T ss_pred             CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence            4588999999886 8885555443  335788887652                    3466888999999999987664


Q ss_pred             -ccCCCcCCCcEEEEeecC
Q 017679          289 -VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 -I~~e~ik~gavVIDvg~n  306 (368)
                       +..+|+|||+.|.-+|.+
T Consensus       206 ~~~~~~l~~g~~v~~vGs~  224 (325)
T TIGR02371       206 VVKADWVSEGTHINAIGAD  224 (325)
T ss_pred             EecHHHcCCCCEEEecCCC
Confidence             789999999999999965

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PLN02712 arogenate dehydrogenase

Probab=97.00  E-value=0.0014  Score=71.28  Aligned_cols=81  Identities=11%  Similarity=0.165  Sum_probs=61.4

Q ss_pred             HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhcc-CCCEEEEecCCCC---
Q 017679          225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITS-EADIVIAAAGVAN---  287 (368)
Q Consensus       225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~-~ADIVIsAvG~p~---  287 (368)
                      ..+-++++++|.|||.|.+ |..++..|.+.|.+|+++++...             ++.+.+. .+|+||.++....   
T Consensus       362 ~~~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~  440 (667)
T PLN02712        362 GCVNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEK  440 (667)
T ss_pred             hccCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHH
Confidence            3456788999999999886 99999999999999999887632             3334454 5899999987432   


Q ss_pred             ccc---CCCcCCCcEEEEeecC
Q 017679          288 LVR---GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       288 ~I~---~e~ik~gavVIDvg~n  306 (368)
                      ++.   ...+++|++|+|++..
T Consensus       441 vi~~l~~~~lk~g~ivvDv~Sv  462 (667)
T PLN02712        441 VLKSLPFQRLKRSTLFVDVLSV  462 (667)
T ss_pred             HHHHHHHhcCCCCcEEEECCCc
Confidence            222   2357889999999864

>PRK12861 malic enzyme; Reviewed

Probab=97.00  E-value=0.0022  Score=70.49  Aligned_cols=168  Identities=14%  Similarity=0.186  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCH---HHHHhcCCcccccCccC
Q 017679          120 TYVRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE---GKILDAVSLEKDVDGFH  195 (368)
Q Consensus       120 ~Yv~~k~k~a~~~G-I~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~---~~il~~I~p~KDVDgl~  195 (368)
                      --...|.-.++++| |++.-+.+.. .+.+|+++.++.+.  |.+-||++     +.+..   -++++.+..+=|+-.||
T Consensus        91 pvmeGK~~L~~~~agid~~di~~~~-~dpd~~v~~v~a~~--~~fg~i~l-----ED~~~p~~f~il~~~~~~~~ipvf~  162 (764)
T PRK12861         91 PVMEGKAVLFKKFAGIDVFDIEINE-TDPDKLVDIIAGLE--PTFGGINL-----EDIKAPECFTVERKLRERMKIPVFH  162 (764)
T ss_pred             chHHHHHHHHhhccCCCccccccCC-CCHHHHHHHHHHHH--hhcCCcee-----eeccCchHHHHHHHHHhcCCCCeec
Confidence            34456777777664 8866666654 46789998888886  46777554     23333   33444443333565555


Q ss_pred             cceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC------
Q 017679          196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT------  266 (368)
Q Consensus       196 ~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t------  266 (368)
                      .--.          |---.+..|++..|+-.+.+++..++++.|+|-+ |..++.+|...|.   .+++|+++-      
T Consensus       163 DD~q----------GTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r  231 (764)
T PRK12861        163 DDQH----------GTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGR  231 (764)
T ss_pred             cccc----------hHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCC
Confidence            3322          2222355788889999999999999999999988 9999999999997   689997531      


Q ss_pred             -----------------CCHhhhccCCCEEEEecCCCCcccCCCcCC---CcEEEEeecCCC
Q 017679          267 -----------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV  308 (368)
Q Consensus       267 -----------------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~---gavVIDvg~n~~  308 (368)
                                       .+|.+.++.+|++|-..+ |+.+++||++.   ..+|+=++ ||.
T Consensus       232 ~~~l~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLs-NPt  291 (764)
T PRK12861        232 TTLMDPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALA-NPT  291 (764)
T ss_pred             cccCCHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECC-CCC
Confidence                             358899999999997766 89999999854   67888777 554

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=96.97  E-value=0.0015  Score=65.34  Aligned_cols=77  Identities=17%  Similarity=0.176  Sum_probs=58.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCC---ccc--
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVAN---LVR--  290 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~---~I~--  290 (368)
                      .|+||+|.|||.|.+ |+++|..|...|.+|++.++..             .++.+.+++||+|+..++.+.   ++.  
T Consensus        13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~e   91 (335)
T PRK13403         13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAE   91 (335)
T ss_pred             hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHH
Confidence            478999999999986 9999999999999999986542             157788999999999887532   343  


Q ss_pred             -CCCcCCCcEE-EEeecC
Q 017679          291 -GSWLKPGAVV-LDVGTC  306 (368)
Q Consensus       291 -~e~ik~gavV-IDvg~n  306 (368)
                       ...+++|+++ +-=|+|
T Consensus        92 il~~MK~GaiL~f~hgfn  109 (335)
T PRK13403         92 VEENLREGQMLLFSHGFN  109 (335)
T ss_pred             HHhcCCCCCEEEECCCcc
Confidence             2356888744 333444

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.97  E-value=0.0018  Score=62.56  Aligned_cols=74  Identities=19%  Similarity=0.271  Sum_probs=57.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cc-c---
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-R---  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I-~---  290 (368)
                      ++|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.++++|+||.+++.+.    .+ .   
T Consensus         3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~   81 (296)
T PRK11559          3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENG   81 (296)
T ss_pred             ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcch
Confidence            47999999876 9999999999999999988752              356677899999999997433    12 1   


Q ss_pred             -CCCcCCCcEEEEeecCC
Q 017679          291 -GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       291 -~e~ik~gavVIDvg~n~  307 (368)
                       ...+++|.++||++...
T Consensus        82 ~~~~~~~g~iiid~st~~   99 (296)
T PRK11559         82 IIEGAKPGTVVIDMSSIA   99 (296)
T ss_pred             HhhcCCCCcEEEECCCCC
Confidence             12467899999998654

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.96  E-value=0.00074  Score=54.18  Aligned_cols=70  Identities=29%  Similarity=0.340  Sum_probs=52.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCC---CEEEEE-eCCC---------------C-CHhhhccCCCEEEEecCCCCc--ccC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH---ATVSIV-HALT---------------K-NPEQITSEADIVIAAAGVANL--VRG  291 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g---AtVti~-h~~t---------------~-~L~~~~~~ADIVIsAvG~p~~--I~~  291 (368)
                      |+.+||.|++ |..++..|.+.|   .+|+++ +++.               . +..+.+++||+||.++.-..+  +-.
T Consensus         1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~   79 (96)
T PF03807_consen    1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS   79 (96)
T ss_dssp             EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH
T ss_pred             CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH
Confidence            5889999986 999999999999   899966 6552               1 466788899999999975443  222


Q ss_pred             --CCcCCCcEEEEee
Q 017679          292 --SWLKPGAVVLDVG  304 (368)
Q Consensus       292 --e~ik~gavVIDvg  304 (368)
                        ....++.++||+.
T Consensus        80 ~i~~~~~~~~vis~~   94 (96)
T PF03807_consen   80 EIPHLLKGKLVISIA   94 (96)
T ss_dssp             HHHHHHTTSEEEEES
T ss_pred             HHhhccCCCEEEEeC
Confidence              3466788999874

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.93  E-value=0.0015  Score=63.72  Aligned_cols=75  Identities=21%  Similarity=0.309  Sum_probs=58.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cccC---
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVRG---  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I~~---  291 (368)
                      ++|.|||.|.+ |.+++..|++.|.+|++++++.              .+..+.++++|+||.+++...    .+..   
T Consensus         2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~   80 (296)
T PRK15461          2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENG   80 (296)
T ss_pred             CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCccc
Confidence            37999999986 9999999999999999998752              355677899999999998653    1221   


Q ss_pred             --CCcCCCcEEEEeecCCC
Q 017679          292 --SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 --e~ik~gavVIDvg~n~~  308 (368)
                        ..+++|.++||+++...
T Consensus        81 i~~~l~~g~lvid~sT~~p   99 (296)
T PRK15461         81 VCEGLSRDALVIDMSTIHP   99 (296)
T ss_pred             HhhcCCCCCEEEECCCCCH
Confidence              13578999999987643

>PRK12562 ornithine carbamoyltransferase subunit F; Provisional

Probab=96.92  E-value=0.064  Score=53.86  Aligned_cols=142  Identities=11%  Similarity=0.003  Sum_probs=97.7

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCccee
Q 017679          123 RNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNI  199 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~  199 (368)
                      -.=..++.++|.++.++.- .+.   ..|-+.+.++-|+.-  +|+|.+-.|-  |-...++.+..    +   +-.+|.
T Consensus        61 ~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~--~~~~~~~a~~~----~---vPVINa  128 (334)
T PRK12562         61 CSFEVAAYDQGARVTYLGP-SGSQIGHKESIKDTARVLGRM--YDGIQYRGHG--QEVVETLAEYA----G---VPVWNG  128 (334)
T ss_pred             HHHHHHHHHcCCeEEEeCC-ccccCCCCcCHHHHHHHHHHh--CCEEEEECCc--hHHHHHHHHhC----C---CCEEEC
Confidence            3557789999999987742 221   135677777777764  8999998652  22222232222    2   345565


Q ss_pred             eeccccCCcCccccCCHHH-HHHHHHHhCC-CCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC-----------
Q 017679          200 GNLAMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-----------  265 (368)
Q Consensus       200 G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i-~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~-----------  265 (368)
                      |       .....||=+.+ ++.+.++.|. .++|+++++||-+ ..|.+.++.++...|++|++|+-.           
T Consensus       129 ~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~  201 (334)
T PRK12562        129 L-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAE  201 (334)
T ss_pred             C-------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHH
Confidence            3       23466998888 5555556553 5899999999975 347999999999999999998632           


Q ss_pred             --------------CCCHhhhccCCCEEEEec
Q 017679          266 --------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       266 --------------t~~L~~~~~~ADIVIsAv  283 (368)
                                    +.++.+.++.||+|.+-.
T Consensus       202 ~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~  233 (334)
T PRK12562        202 CSALAQKHGGKITLTEDIAAGVKGADFIYTDV  233 (334)
T ss_pred             HHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence                          246678899999999754

>TIGR00670 asp_carb_tr aspartate carbamoyltransferase

Probab=96.91  E-value=0.075  Score=52.58  Aligned_cols=157  Identities=13%  Similarity=0.110  Sum_probs=103.5

Q ss_pred             EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679          106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL  182 (368)
Q Consensus       106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il  182 (368)
                      +....++- .| |..=--.=..++.++|.++.++.-+.++   ..|-+.+..+-|+.-  +|+|.+-.|  .|-...++.
T Consensus        40 k~v~~lF~-~p-STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~--~~~~~~~~a  113 (301)
T TIGR00670        40 KILANLFF-EP-STRTRLSFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHP--LEGAARLAA  113 (301)
T ss_pred             CEEEEEec-cC-CchhHhHHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECC--chhHHHHHH
Confidence            33444442 33 4333335678899999988776441221   134566666666664  789999865  344444443


Q ss_pred             hcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhCCCEE
Q 017679          183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATV  259 (368)
Q Consensus       183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~gAtV  259 (368)
                      +..       ++-.+|.|-      ...+.||=+.+ ++.+.++.| +++|++|+++|-+  +.|.+.++.++...|++|
T Consensus       114 ~~s-------~vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v  179 (301)
T TIGR00670       114 EVS-------EVPVINAGD------GSNQHPTQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEV  179 (301)
T ss_pred             hhC-------CCCEEeCCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEE
Confidence            332       244556531      13467998888 444444554 7999999999987  567999999999999999


Q ss_pred             EEEeCC---------------------CCCHhhhccCCCEEEEe
Q 017679          260 SIVHAL---------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       260 ti~h~~---------------------t~~L~~~~~~ADIVIsA  282 (368)
                      ++++-.                     +.++++.++.||+|.+-
T Consensus       180 ~~~~P~~~~~~~~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~  223 (301)
T TIGR00670       180 YLISPEELRMPKEILEELKAKGIKVRETESLEEVIDEADVLYVT  223 (301)
T ss_pred             EEECCccccCCHHHHHHHHHcCCEEEEECCHHHHhCCCCEEEEC
Confidence            999733                     24567788999998874

Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.

>PLN02256 arogenate dehydrogenase

Probab=96.89  E-value=0.0026  Score=62.80  Aligned_cols=80  Identities=16%  Similarity=0.225  Sum_probs=59.3

Q ss_pred             HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhc-cCCCEEEEecCCCC---
Q 017679          225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQIT-SEADIVIAAAGVAN---  287 (368)
Q Consensus       225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~-~~ADIVIsAvG~p~---  287 (368)
                      +.-.+-+++++.|||.|.+ |..++..|.+.|.+|+++.+..             .++.+.+ .++|+||.|++...   
T Consensus        29 ~~~~~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~  107 (304)
T PLN02256         29 EELEKSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEA  107 (304)
T ss_pred             HhhccCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHH
Confidence            3334457889999999886 9999999999998999887653             1334444 46999999997432   


Q ss_pred             ccc---CCCcCCCcEEEEeec
Q 017679          288 LVR---GSWLKPGAVVLDVGT  305 (368)
Q Consensus       288 ~I~---~e~ik~gavVIDvg~  305 (368)
                      ++.   ...++++++|+|++.
T Consensus       108 vl~~l~~~~l~~~~iviDv~S  128 (304)
T PLN02256        108 VLRSLPLQRLKRSTLFVDVLS  128 (304)
T ss_pred             HHHhhhhhccCCCCEEEecCC
Confidence            222   234688999999997

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.87  E-value=0.0014  Score=61.62  Aligned_cols=72  Identities=26%  Similarity=0.337  Sum_probs=56.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------CHhhhccCCCEEEEecCCCCc---cc--
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NPEQITSEADIVIAAAGVANL---VR--  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------~L~~~~~~ADIVIsAvG~p~~---I~--  290 (368)
                      +++.|+|+|++ |..++..|...|.+|+|-+|+.+                 ..++.++.|||||.|++-...   +.  
T Consensus         2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l   80 (211)
T COG2085           2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAEL   80 (211)
T ss_pred             cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHH
Confidence            57899999997 99999999999999999977653                 345778999999999986543   21  


Q ss_pred             CCCcCCCcEEEEeecCC
Q 017679          291 GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       291 ~e~ik~gavVIDvg~n~  307 (368)
                      .+++. |.+|||+. ||
T Consensus        81 ~~~~~-~KIvID~t-np   95 (211)
T COG2085          81 RDALG-GKIVIDAT-NP   95 (211)
T ss_pred             HHHhC-CeEEEecC-CC
Confidence            23344 89999987 54

>PRK01713 ornithine carbamoyltransferase; Provisional

Probab=96.86  E-value=0.019  Score=57.61  Aligned_cols=146  Identities=12%  Similarity=0.068  Sum_probs=99.0

Q ss_pred             cccHHHHHHHHHHHHHcCCeEEEEEcCCCC----CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCccccc
Q 017679          116 RDSQTYVRNKIKACEEVGIKSIVTEFADGC----TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV  191 (368)
Q Consensus       116 ~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~----~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDV  191 (368)
                      |...+- -.=..++.++|.++..+  +.+.    ..|.+.+.++-|+.-  +|+|.+--|  .|-...++.+..    + 
T Consensus        56 pSTRTR-~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~--~~~~~~~~a~~~----~-  123 (334)
T PRK01713         56 TSTRTR-CAFEVAAYDQGAQVTYI--DPNSSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQSIVNELAEYA----G-  123 (334)
T ss_pred             CCchHH-HHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEEcC--chHHHHHHHHhC----C-
Confidence            433333 34567889999998765  3221    135677777777764  889999865  222222332222    2 


Q ss_pred             CccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC----
Q 017679          192 DGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL----  265 (368)
Q Consensus       192 Dgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~----  265 (368)
                        +-.+|.+       .+...||=+.+ ++.+.++.|.+++|++|++||-+ ..|.+.++.++...|++|++|+-.    
T Consensus       124 --vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p  194 (334)
T PRK01713        124 --VPVFNGL-------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLP  194 (334)
T ss_pred             --CCEEECC-------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcC
Confidence              3445642       23467998888 55565666657999999999986 458999999999999999999632    


Q ss_pred             ---------------------CCCHhhhccCCCEEEEe
Q 017679          266 ---------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       266 ---------------------t~~L~~~~~~ADIVIsA  282 (368)
                                           +.++.+.+++||+|.+-
T Consensus       195 ~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~  232 (334)
T PRK01713        195 EASLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTD  232 (334)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence                                 14667889999999973

>PLN02342 ornithine carbamoyltransferase

Probab=96.85  E-value=0.082  Score=53.41  Aligned_cols=188  Identities=13%  Similarity=0.095  Sum_probs=118.5

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcC--C------CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC--
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSI--G------KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG--  144 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~--g------~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--  144 (368)
                      .+|+-..+.++=.+.|-+...++|+..  +      ..-+....++- .|.-.+- -.=..++.++|.++.++.-...  
T Consensus        47 ~~lsi~dls~~ei~~ll~~A~~lk~~~~~~~~~~~~L~gk~va~lF~-epSTRTR-~SFE~A~~~LGg~~i~l~~~~ss~  124 (348)
T PLN02342         47 HFLHIDDFDKEEILGLLDRAKEVKALLKSGDRSFQPFKGKSMAMIFT-KPSMRTR-VSFETGFFLLGGHALYLGPDDIQL  124 (348)
T ss_pred             CccchhhCCHHHHHHHHHHHHHHHhhhhcCccccccCCCCEEEEEec-CCCcchH-HHHHHHHHHcCCcEEEeCcccccC
Confidence            467777776554455555555555421  1      11223333343 3333333 3556789999999987632110  


Q ss_pred             CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHH
Q 017679          145 CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELL  223 (368)
Q Consensus       145 ~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL  223 (368)
                      ...|.+.+.++-|..-  +|+|.+-.|-.  -.    ++.+...   -.+-.+|.|       ...+.||=+.+ ++.+.
T Consensus       125 ~kGESl~DTarvLs~y--~D~IviR~~~~--~~----~~~la~~---~~vPVINA~-------~~~~HPtQaLaDl~Ti~  186 (348)
T PLN02342        125 GKREETRDIARVLSRY--NDIIMARVFAH--QD----VLDLAEY---SSVPVINGL-------TDYNHPCQIMADALTII  186 (348)
T ss_pred             CCCcCHHHHHHHHHHh--CCEEEEeCCCh--HH----HHHHHHh---CCCCEEECC-------CCCCChHHHHHHHHHHH
Confidence            0124566777766664  78999986622  22    2223221   124456652       23457998888 44444


Q ss_pred             HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------CCCHhhhccCCCEEEE
Q 017679          224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------TKNPEQITSEADIVIA  281 (368)
Q Consensus       224 ~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------t~~L~~~~~~ADIVIs  281 (368)
                      ++.| +++|++|++||-+..|.+.++.++...|++|++|+-.                      +.++.+.++.||+|.+
T Consensus       187 e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~~d~~eav~~aDVvy~  265 (348)
T PLN02342        187 EHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKARAAGISKIEITNDPAEAVKGADVVYT  265 (348)
T ss_pred             HHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHhCCCcEEEEcCHHHHhCCCCEEEE
Confidence            5555 7999999999998889999999999999999999622                      2466788999999997


Q ss_pred             ec
Q 017679          282 AA  283 (368)
Q Consensus       282 Av  283 (368)
                      -.
T Consensus       266 ~~  267 (348)
T PLN02342        266 DV  267 (348)
T ss_pred             CC
Confidence            63

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.84  E-value=0.0026  Score=62.23  Aligned_cols=74  Identities=26%  Similarity=0.369  Sum_probs=57.8

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------CH-hhhccCCCEEEEecCCCC---cc
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NP-EQITSEADIVIAAAGVAN---LV  289 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------~L-~~~~~~ADIVIsAvG~p~---~I  289 (368)
                      -++|+|+|.|.+ |+.++..|.++|..|.++.+...                  +. .+....||+||.|++...   ++
T Consensus         3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l   81 (279)
T COG0287           3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL   81 (279)
T ss_pred             CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHH
Confidence            368999998886 99999999999999888875431                  22 566778999999998543   22


Q ss_pred             c--CCCcCCCcEEEEeecC
Q 017679          290 R--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       290 ~--~e~ik~gavVIDvg~n  306 (368)
                      .  ...+++|++|.|+|..
T Consensus        82 ~~l~~~l~~g~iv~Dv~S~  100 (279)
T COG0287          82 KELAPHLKKGAIVTDVGSV  100 (279)
T ss_pred             HHhcccCCCCCEEEecccc
Confidence            1  1278999999999975

>PRK04284 ornithine carbamoyltransferase; Provisional

Probab=96.82  E-value=0.022  Score=57.05  Aligned_cols=154  Identities=8%  Similarity=-0.048  Sum_probs=102.3

Q ss_pred             EEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC----HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679          107 LAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT----EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL  182 (368)
Q Consensus       107 LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il  182 (368)
                      ....++= .|...+.. .=..++.++|.++.+.  ..+.+    -|.+.+.++-|+.-  +|+|.+-.|  .|-...++.
T Consensus        47 ~l~~lF~-epSTRTR~-SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iviR~~--~~~~~~~~a  118 (332)
T PRK04284         47 NIALIFE-KDSTRTRC-AFEVAAYDQGAHVTYL--GPTGSQMGKKESTKDTARVLGGM--YDGIEYRGF--SQRTVETLA  118 (332)
T ss_pred             EEEEEec-CCChhHHH-HHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEecC--chHHHHHHH
Confidence            3344443 34444443 5567889999998754  33222    35677777777764  889999765  323223332


Q ss_pred             hcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHh-CCCCccceEEEEccC-ccchHHHHHHHhhCCCEEE
Q 017679          183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVS  260 (368)
Q Consensus       183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~-~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVt  260 (368)
                      +..    .   +-.+|.|       .....||=+.+=+--++++ ...++|++|++||-+ +.|.+.++.+|...|++|+
T Consensus       119 ~~s----~---vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~  184 (332)
T PRK04284        119 EYS----G---VPVWNGL-------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFH  184 (332)
T ss_pred             HhC----C---CCEEECC-------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEE
Confidence            222    2   3455642       2346799888844445554 457999999999975 4579999999999999999


Q ss_pred             EEeCC-------------------------CCCHhhhccCCCEEEEe
Q 017679          261 IVHAL-------------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       261 i~h~~-------------------------t~~L~~~~~~ADIVIsA  282 (368)
                      +++-.                         +.++.+.+++||+|.+-
T Consensus       185 ~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~  231 (332)
T PRK04284        185 LVCPKELNPDDELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD  231 (332)
T ss_pred             EECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence            99733                         24667889999999975

>PRK03515 ornithine carbamoyltransferase subunit I; Provisional

Probab=96.81  E-value=0.021  Score=57.34  Aligned_cols=140  Identities=11%  Similarity=0.008  Sum_probs=97.3

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCC----HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcce
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCT----EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLN  198 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N  198 (368)
                      -.=..++.++|.++.+..  .+.+    .|.+.+.++-|+.-  +|+|.+-.|  .|-...++.+..       ++-.+|
T Consensus        61 ~SFe~A~~~LGg~~i~l~--~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~--~~~~~~~~a~~~-------~vPVIN  127 (336)
T PRK03515         61 CSFEVAAYDQGARVTYLG--PSGSQIGHKESIKDTARVLGRM--YDGIQYRGY--GQEIVETLAEYA-------GVPVWN  127 (336)
T ss_pred             HHHHHHHHHcCCcEEEeC--CccccCCCCCCHHHHHHHHHHh--CcEEEEEeC--ChHHHHHHHHhC-------CCCEEE
Confidence            355678899999988753  2222    35677778777764  899999865  333333333322       134456


Q ss_pred             eeeccccCCcCccccCCHHH-HHHHHHHhC-CCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC----------
Q 017679          199 IGNLAMRGREPLFIPCTPKG-CIELLIRSG-VEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL----------  265 (368)
Q Consensus       199 ~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~-i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~----------  265 (368)
                      .+       .....||=+.+ ++.+.++.| .+++|++++.||-+ ..|.+.++.++...|++|++|+-.          
T Consensus       128 a~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~  200 (336)
T PRK03515        128 GL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKACWPEAALVT  200 (336)
T ss_pred             CC-------CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchhcCcHHHHH
Confidence            42       23467998888 555555555 37999999999975 347999999999999999999632          


Q ss_pred             ---------------CCCHhhhccCCCEEEEe
Q 017679          266 ---------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       266 ---------------t~~L~~~~~~ADIVIsA  282 (368)
                                     +.++++.+++||+|.+-
T Consensus       201 ~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd  232 (336)
T PRK03515        201 ECRALAQKNGGNITLTEDIAEGVKGADFIYTD  232 (336)
T ss_pred             HHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence                           24667889999999975

>PRK02255 putrescine carbamoyltransferase; Provisional

Probab=96.80  E-value=0.025  Score=56.82  Aligned_cols=178  Identities=11%  Similarity=0.094  Sum_probs=115.7

Q ss_pred             EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679          106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL  182 (368)
Q Consensus       106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il  182 (368)
                      +....++= .|...+-+ .=..++.++|-++.++.- .+++   .|.+.+.++-|+.-  +|+|.+-.+  .|-...++.
T Consensus        43 k~v~~lF~-epSTRTR~-SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~~~~~a  115 (338)
T PRK02255         43 KTLGMIFE-QSSTRTRV-SFETAMTQLGGHAQYLAP-GQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQTVVELA  115 (338)
T ss_pred             CEEEEEeC-CCCcchHH-HHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHHHHHHH
Confidence            33444443 34444443 567889999999887752 2211   35577777777764  789988765  333333332


Q ss_pred             hcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhC--CCCccceEEEEccCccchHHHHHHHhhCCCEE
Q 017679          183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV  259 (368)
Q Consensus       183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~--i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtV  259 (368)
                      +..       .+-.+|.|       .....||=+.+ ++.+.++.+  -+++|++|++||-...|.+.++.++...|++|
T Consensus       116 ~~~-------~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v  181 (338)
T PRK02255        116 KYA-------TVPVINGM-------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDF  181 (338)
T ss_pred             HhC-------CCCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEE
Confidence            221       23455632       23357998888 555555654  36999999999997788999999999999999


Q ss_pred             EEEeCC-------------------------CCCHhhhccCCCEEEEe-----cCC------------CCc-ccCCCc--
Q 017679          260 SIVHAL-------------------------TKNPEQITSEADIVIAA-----AGV------------ANL-VRGSWL--  294 (368)
Q Consensus       260 ti~h~~-------------------------t~~L~~~~~~ADIVIsA-----vG~------------p~~-I~~e~i--  294 (368)
                      ++|+-.                         +.++.+.++.||+|.+-     .+.            +.+ |+.+.+  
T Consensus       182 ~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y~v~~ell~~  261 (338)
T PRK02255        182 VHFGPKGYQLPEEHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYTDVWYGLYDAELSEEERMAIFYPKYQVTPELMAK  261 (338)
T ss_pred             EEECCCccccCHHHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcccHhhccchhhHHHHHHhhCCCceECHHHHhc
Confidence            999632                         24677899999999983     332            223 555543  


Q ss_pred             -CCCcEEEEee
Q 017679          295 -KPGAVVLDVG  304 (368)
Q Consensus       295 -k~gavVIDvg  304 (368)
                       +++++|.=++
T Consensus       262 a~~~~ivmHpL  272 (338)
T PRK02255        262 AGPHAKFMHCL  272 (338)
T ss_pred             cCCCCEEeCCC
Confidence             6677776655

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=96.77  E-value=0.0033  Score=61.96  Aligned_cols=76  Identities=13%  Similarity=0.049  Sum_probs=60.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhC-C-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~-g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .-+++.|||+|.- |+.-+..+..- + .+|.+.+++.                     .+.++.+++||||+++|+...
T Consensus       116 da~~l~iiGaG~Q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~  194 (301)
T PRK06407        116 NVENFTIIGSGFQ-AETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDT  194 (301)
T ss_pred             CCcEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCC
Confidence            4689999999876 88777666643 3 3788887652                     356788999999999999776


Q ss_pred             c-ccCCCcCCCcEEEEeecCC
Q 017679          288 L-VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 ~-I~~e~ik~gavVIDvg~n~  307 (368)
                      . ++.+|++||+.|.=+|.+.
T Consensus       195 P~~~~~~l~pg~hV~aiGs~~  215 (301)
T PRK06407        195 PIFNRKYLGDEYHVNLAGSNY  215 (301)
T ss_pred             cEecHHHcCCCceEEecCCCC
Confidence            5 7999999999999999754

>PRK14805 ornithine carbamoyltransferase; Provisional

Probab=96.72  E-value=0.098  Score=51.79  Aligned_cols=147  Identities=12%  Similarity=0.091  Sum_probs=98.5

Q ss_pred             cccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccC
Q 017679          116 RDSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD  192 (368)
Q Consensus       116 ~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVD  192 (368)
                      |...+.. .=..++.++|.++.++. +.+++   -|.+.+.++-|+.-  +|+|.+-.|  .|-....+.+..    +  
T Consensus        48 pSTRTR~-SFE~A~~~LGg~~i~l~-~~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~--~~~~~~~~a~~~----~--  115 (302)
T PRK14805         48 PSLRTRV-SFDIGINKLGGHCLYLD-QQNGALGKRESVADFAANLSCW--ADAIVARVF--SHSTIEQLAEHG----S--  115 (302)
T ss_pred             CCchHHH-HHHHHHHHcCCcEEECC-CCcCcCCCCcCHHHHHHHHHHh--CCEEEEeCC--ChhHHHHHHHhC----C--
Confidence            4444443 56789999999988764 22211   35577777777764  889998865  332223332221    2  


Q ss_pred             ccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------
Q 017679          193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------  266 (368)
Q Consensus       193 gl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------  266 (368)
                       +-.+|.|-       ....||=+.+=+--++++..+++|++|+++|-+..|.+.++.++...|++|++++-..      
T Consensus       116 -vPVINa~~-------~~~HPtQaL~Dl~Ti~e~~g~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~  187 (302)
T PRK14805        116 -VPVINALC-------DLYHPCQALADFLTLAEQFGDVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQ  187 (302)
T ss_pred             -CCEEECCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcCCHH
Confidence             45566532       2367998888444444444479999999999988899999999999999999996321      


Q ss_pred             -------------------CCHhhhccCCCEEEEec
Q 017679          267 -------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       267 -------------------~~L~~~~~~ADIVIsAv  283 (368)
                                         .++ +.++.||+|.+-+
T Consensus       188 ~~~~a~~~~~~~g~~~~~~~d~-~a~~~aDvvy~~~  222 (302)
T PRK14805        188 IVAEAQELAAKSGGKLVLTSDI-EAIEGHDAIYTDT  222 (302)
T ss_pred             HHHHHHHHHHHcCCEEEEEcCH-HHHCCCCEEEeec
Confidence                               232 4578899988743

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.71  E-value=0.0022  Score=62.63  Aligned_cols=74  Identities=26%  Similarity=0.325  Sum_probs=56.9

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc---cc
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------KNPEQITSEADIVIAAAGVANL---VR  290 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~---I~  290 (368)
                      .++|.|||.|.+ |..++..|.+.|.  .|+++.++.                .++.+.+++||+||.+++....   +.
T Consensus         6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~   84 (307)
T PRK07502          6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAA   84 (307)
T ss_pred             CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHH
Confidence            368999998876 9999999998884  788887652                2455678899999999985431   21


Q ss_pred             --CCCcCCCcEEEEeecC
Q 017679          291 --GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 --~e~ik~gavVIDvg~n  306 (368)
                        ..++++|.+|+|+|..
T Consensus        85 ~l~~~l~~~~iv~dvgs~  102 (307)
T PRK07502         85 EIAPHLKPGAIVTDVGSV  102 (307)
T ss_pred             HHHhhCCCCCEEEeCccc
Confidence              2467889999999863

>PRK02102 ornithine carbamoyltransferase; Validated

Probab=96.70  E-value=0.041  Score=55.17  Aligned_cols=156  Identities=11%  Similarity=0.018  Sum_probs=101.6

Q ss_pred             EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679          106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL  182 (368)
Q Consensus       106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il  182 (368)
                      +....++= .| |..=--.=..++.++|..+.+..- .++   ..|.+.+.++-|..-  +|+|.+--|-  +-...++.
T Consensus        47 k~v~~lF~-ep-STRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~rvls~y--~D~iviR~~~--~~~~~~~a  119 (331)
T PRK02102         47 KNIALIFE-KT-STRTRCAFEVAAIDLGAHVTYLGP-NDSQLGKKESIEDTARVLGRM--YDGIEYRGFK--QEIVEELA  119 (331)
T ss_pred             CEEEEEeC-CC-ChhHHHHHHHHHHHcCCCEEEcCc-ccccCCCCcCHHHHHHHHhhc--CCEEEEECCc--hHHHHHHH
Confidence            33444443 23 433333557789999999875532 111   135677777777663  8899998652  22222332


Q ss_pred             hcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEE
Q 017679          183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSI  261 (368)
Q Consensus       183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti  261 (368)
                      +..    +   +-.+|.|.       ....||=+.+=+--++++...++|++|++||.+ ..|.+.++.++...|++|++
T Consensus       120 ~~~----~---vPVINa~~-------~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~  185 (331)
T PRK02102        120 KYS----G---VPVWNGLT-------DEWHPTQMLADFMTMKEHFGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRI  185 (331)
T ss_pred             HhC----C---CCEEECCC-------CCCChHHHHHHHHHHHHHhCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEE
Confidence            222    2   33456532       346699888854445444457999999999986 44799999999999999999


Q ss_pred             EeCC-------------------------CCCHhhhccCCCEEEEe
Q 017679          262 VHAL-------------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       262 ~h~~-------------------------t~~L~~~~~~ADIVIsA  282 (368)
                      ++-.                         +.++++.++.||+|.+-
T Consensus       186 ~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~  231 (331)
T PRK02102        186 CAPKELWPEEELVALAREIAKETGAKITITEDPEEAVKGADVIYTD  231 (331)
T ss_pred             ECCcccccCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence            9632                         24567889999999975

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.67  E-value=0.0018  Score=62.58  Aligned_cols=72  Identities=28%  Similarity=0.266  Sum_probs=54.8

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------HhhhccCCCEEEEecCCCCc---cc--CCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------PEQITSEADIVIAAAGVANL---VR--GSW  293 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------L~~~~~~ADIVIsAvG~p~~---I~--~e~  293 (368)
                      +|.|||.|.+ |..++..|.+.|.+|+++.++...               ..+.+++||+||.|++....   +.  ...
T Consensus         2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~   80 (279)
T PRK07417          2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPA   80 (279)
T ss_pred             eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHh
Confidence            6899999876 999999999999999999875321               12357899999999974322   21  234


Q ss_pred             cCCCcEEEEeecC
Q 017679          294 LKPGAVVLDVGTC  306 (368)
Q Consensus       294 ik~gavVIDvg~n  306 (368)
                      ++++.+|.|++.-
T Consensus        81 l~~~~ii~d~~Sv   93 (279)
T PRK07417         81 LPPEAIVTDVGSV   93 (279)
T ss_pred             CCCCcEEEeCcch
Confidence            6789999999864

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1

Probab=96.65  E-value=0.0034  Score=61.46  Aligned_cols=92  Identities=13%  Similarity=0.270  Sum_probs=75.2

Q ss_pred             CCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhC----CC-------EEEEEeCCC----------------
Q 017679          214 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HA-------TVSIVHALT----------------  266 (368)
Q Consensus       214 cTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~----gA-------tVti~h~~t----------------  266 (368)
                      ++-.|++..++-.+.+++..++++.|+|-+ |..++.+|...    |.       .+++++++-                
T Consensus         7 V~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~   85 (279)
T cd05312           7 VALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPF   85 (279)
T ss_pred             HHHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHH
Confidence            345788999999999999999999999988 99999888765    76       788887641                


Q ss_pred             ---------CCHhhhcc--CCCEEEEecCCCCcccCCCcC------CCcEEEEeecCC
Q 017679          267 ---------KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCP  307 (368)
Q Consensus       267 ---------~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~  307 (368)
                               .+|.+.++  ++|++|-..+.++.+++|+++      +.-+|+=+. ||
T Consensus        86 a~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NP  142 (279)
T cd05312          86 ARKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALS-NP  142 (279)
T ss_pred             HhhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-Cc
Confidence                     25778888  899999999888999999875      356777776 44

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH

>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional

Probab=96.59  E-value=0.069  Score=53.10  Aligned_cols=149  Identities=9%  Similarity=0.046  Sum_probs=97.0

Q ss_pred             CcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC----HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccc
Q 017679          115 RRDSQTYVRNKIKACEEVGIKSIVTEFADGCT----EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKD  190 (368)
Q Consensus       115 d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KD  190 (368)
                      .|.-.+.. .=..++.++|..+.+.  ....+    .|-+.+.++-|+.- .+|+|++-.|  .|-...++.+.+     
T Consensus        54 epSTRTR~-SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~y-~~D~iv~R~~--~~~~~~~~a~~~-----  122 (310)
T PRK13814         54 EPSTRTRN-SFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEAM-GVYFFIVRHS--ENETPEQIAKQL-----  122 (310)
T ss_pred             cCcchhHH-HHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHHh-CCCEEEEeCC--chhHHHHHHHhC-----
Confidence            34444443 4567888999977664  32211    24466666666552 3578887754  333333333332     


Q ss_pred             cCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhCCC-EEEEEeCC--
Q 017679          191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHA-TVSIVHAL--  265 (368)
Q Consensus       191 VDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~gA-tVti~h~~--  265 (368)
                       ..+-++|.|.      .+.+.||=+.+=+--++++...++|++|+++|-+  +-|.+.++.++...|+ +|++|+-.  
T Consensus       123 -~~vPvINag~------g~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~  195 (310)
T PRK13814        123 -SSGVVINAGD------GNHQHPSQALIDLMTIKQHKPHWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSL  195 (310)
T ss_pred             -CCCCeEECCc------CCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCccc
Confidence             1245567542      3456799888844444444457999999999986  4679999999999998 99998632  


Q ss_pred             ------------CCCHhhhccCCCEEEE
Q 017679          266 ------------TKNPEQITSEADIVIA  281 (368)
Q Consensus       266 ------------t~~L~~~~~~ADIVIs  281 (368)
                                  +.++.+.++.||+|.+
T Consensus       196 ~p~~~~~~~~~~~~d~~ea~~~aDvvy~  223 (310)
T PRK13814        196 LPDKVGNDSIKKFTELKPSLLNSDVIVT  223 (310)
T ss_pred             CcCccccceEEEEcCHHHHhCCCCEEEE
Confidence                        2567889999999986

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.58  E-value=0.0037  Score=64.08  Aligned_cols=74  Identities=27%  Similarity=0.349  Sum_probs=55.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------CHhhh---------------ccCCCEEEEe
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQI---------------TSEADIVIAA  282 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~L~~~---------------~~~ADIVIsA  282 (368)
                      ++|.|||.|.+ |.|+|..|++.|.+|+.++++..               .+.+.               .++||+||.+
T Consensus         4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~   82 (415)
T PRK11064          4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA   82 (415)
T ss_pred             cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence            68999999875 99999999999999999987542               22222               2379999999


Q ss_pred             cCCC---------Cccc------CCCcCCCcEEEEeecCC
Q 017679          283 AGVA---------NLVR------GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       283 vG~p---------~~I~------~e~ik~gavVIDvg~n~  307 (368)
                      ++.|         ..+.      ...+++|++||+..+.+
T Consensus        83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~  122 (415)
T PRK11064         83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP  122 (415)
T ss_pred             cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence            9986         1221      23568899999987754

>TIGR00658 orni_carb_tr ornithine carbamoyltransferase

Probab=96.56  E-value=0.036  Score=54.81  Aligned_cols=155  Identities=15%  Similarity=0.194  Sum_probs=101.9

Q ss_pred             EEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhc
Q 017679          107 LAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDA  184 (368)
Q Consensus       107 LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~  184 (368)
                      .+..++=+ |...+- -.=..++.++|.++.++.-...  ...|-+.+.++-|+.-  +|+|.+-.|-.  -....+.+.
T Consensus        41 ~v~~lF~e-pSTRTR-~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~--~~~~~~a~~  114 (304)
T TIGR00658        41 TLALIFEK-PSTRTR-VSFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKH--EDVEELAKY  114 (304)
T ss_pred             EEEEEecC-CCcchH-HHHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCCh--HHHHHHHHh
Confidence            44444432 333333 3557889999999887643211  0135577777777764  78999986632  222233222


Q ss_pred             CCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          185 VSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       185 I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      .       ++-.+|.|       .....||=+.+ ++.+.++.| .++|.+|+++|..+.|.+.++.+|.+.|++|++++
T Consensus       115 ~-------~vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~  179 (304)
T TIGR00658       115 A-------SVPVINGL-------TDLFHPCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVAT  179 (304)
T ss_pred             C-------CCCEEECC-------CCCCChHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEEC
Confidence            2       23455653       13466998888 444444554 69999999999977789999999999999999997


Q ss_pred             CC-------------------------CCCHhhhccCCCEEEEe
Q 017679          264 AL-------------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       264 ~~-------------------------t~~L~~~~~~ADIVIsA  282 (368)
                      -.                         +.++++.+++||+|.+-
T Consensus       180 P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~  223 (304)
T TIGR00658       180 PEGYEPDADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTD  223 (304)
T ss_pred             CchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence            32                         24667889999999974

Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.

>PRK06046 alanine dehydrogenase; Validated

Probab=96.55  E-value=0.0057  Score=60.73  Aligned_cols=74  Identities=20%  Similarity=0.327  Sum_probs=57.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhh-CCC-EEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~-~gA-tVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .-+++.|||.|.. |+..+..|.. .+. .|.+++++.                     .++++.+. +|+|+++|+...
T Consensus       128 ~~~~vgiiG~G~q-a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~  205 (326)
T PRK06046        128 DSKVVGIIGAGNQ-ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRK  205 (326)
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCC
Confidence            4579999999987 9888887764 344 688887652                     23555565 999999998655


Q ss_pred             c-ccCCCcCCCcEEEEeecC
Q 017679          288 L-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       288 ~-I~~e~ik~gavVIDvg~n  306 (368)
                      . +..+|+++|+.|.-+|.+
T Consensus       206 P~~~~~~l~~g~hV~~iGs~  225 (326)
T PRK06046        206 PVVKAEWIKEGTHINAIGAD  225 (326)
T ss_pred             cEecHHHcCCCCEEEecCCC
Confidence            4 799999999999999965

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=96.55  E-value=0.0041  Score=56.44  Aligned_cols=76  Identities=25%  Similarity=0.296  Sum_probs=51.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------CHhhhccCCCEEEEecCC---CCccc--
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NPEQITSEADIVIAAAGV---ANLVR--  290 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------~L~~~~~~ADIVIsAvG~---p~~I~--  290 (368)
                      |+||+|.|||.|.- |+.-|..|...|.+|++..+...              +..+.+++||+|+..++-   +....  
T Consensus         2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~   80 (165)
T PF07991_consen    2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEE   80 (165)
T ss_dssp             HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHH
T ss_pred             cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHH
Confidence            58999999999987 99999999999999999987642              567899999999999862   22221  


Q ss_pred             -CCCcCCCcE-EEEeecC
Q 017679          291 -GSWLKPGAV-VLDVGTC  306 (368)
Q Consensus       291 -~e~ik~gav-VIDvg~n  306 (368)
                       ...+++|++ ++==|+|
T Consensus        81 I~p~l~~G~~L~fahGfn   98 (165)
T PF07991_consen   81 IAPNLKPGATLVFAHGFN   98 (165)
T ss_dssp             HHHHS-TT-EEEESSSHH
T ss_pred             HHhhCCCCCEEEeCCcch
Confidence             124778854 3444444

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=96.53  E-value=0.0042  Score=60.17  Aligned_cols=70  Identities=21%  Similarity=0.291  Sum_probs=55.1

Q ss_pred             EEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----cc-----CCC
Q 017679          237 VIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VR-----GSW  293 (368)
Q Consensus       237 VIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I~-----~e~  293 (368)
                      +||.|.+ |.+++..|.+.|.+|++++++.              .+..+.++++|+||.+++.+..    +.     .+.
T Consensus         1 ~IGlG~m-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~   79 (288)
T TIGR01692         1 FIGLGNM-GGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPK   79 (288)
T ss_pred             CCcccHh-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhc
Confidence            5798876 9999999999999999998762              3566788999999999986442    21     124


Q ss_pred             cCCCcEEEEeecCC
Q 017679          294 LKPGAVVLDVGTCP  307 (368)
Q Consensus       294 ik~gavVIDvg~n~  307 (368)
                      +++|.+|||+++..
T Consensus        80 ~~~g~~vid~st~~   93 (288)
T TIGR01692        80 VAKGSLLIDCSTID   93 (288)
T ss_pred             CCCCCEEEECCCCC
Confidence            57899999998654

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK06823 ornithine cyclodeaminase; Validated

Probab=96.53  E-value=0.0057  Score=60.71  Aligned_cols=76  Identities=9%  Similarity=0.160  Sum_probs=56.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhhC-C-CEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCCCc
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~-g-AtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      .-+++.|||.|.- ++.-+..+..- . .+|.+.+++.                    .+.++.+++||||+++|+....
T Consensus       127 d~~~l~iiG~G~q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P  205 (315)
T PRK06823        127 HVSAIGIVGTGIQ-ARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREP  205 (315)
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCc
Confidence            4567788887765 76666655432 2 3677776542                    3567889999999999997665


Q ss_pred             -ccCCCcCCCcEEEEeecCC
Q 017679          289 -VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       289 -I~~e~ik~gavVIDvg~n~  307 (368)
                       ++.+|++||+.|+=+|.+.
T Consensus       206 ~~~~~~l~~G~hi~~iGs~~  225 (315)
T PRK06823        206 LLQAEDIQPGTHITAVGADS  225 (315)
T ss_pred             eeCHHHcCCCcEEEecCCCC
Confidence             7999999999999999653

>PRK06545 prephenate dehydrogenase; Validated

Probab=96.51  E-value=0.0045  Score=62.12  Aligned_cols=73  Identities=27%  Similarity=0.421  Sum_probs=55.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------------CCHhhhccCCCEEEEecCCCC---cc--
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQITSEADIVIAAAGVAN---LV--  289 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------------~~L~~~~~~ADIVIsAvG~p~---~I--  289 (368)
                      ++|.|||.|.+ |..++..|.+.|..|.+..+..                  .++.+.+++||+||.|++...   ++  
T Consensus         1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~   79 (359)
T PRK06545          1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAE   79 (359)
T ss_pred             CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHH
Confidence            47999999886 9999999999998777776532                  234556789999999998533   22  


Q ss_pred             -cCCCcCCCcEEEEeecC
Q 017679          290 -RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       290 -~~e~ik~gavVIDvg~n  306 (368)
                       .+..++++++|.|+|.-
T Consensus        80 l~~~~l~~~~ivtDv~Sv   97 (359)
T PRK06545         80 LADLELKPGVIVTDVGSV   97 (359)
T ss_pred             HhhcCCCCCcEEEeCccc
Confidence             22147889999999975

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.48  E-value=0.0066  Score=59.28  Aligned_cols=72  Identities=18%  Similarity=0.253  Sum_probs=55.5

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccC---CCEEEEecCCCCc----cc--
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSE---ADIVIAAAGVANL----VR--  290 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~---ADIVIsAvG~p~~----I~--  290 (368)
                      ++.+||.|.+ |.+++..|.+.|.+|++++++.              .+.++.+++   +|+||++++.+..    +.  
T Consensus         2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i   80 (299)
T PRK12490          2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDL   80 (299)
T ss_pred             EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHH
Confidence            5899999986 9999999999999999998762              345555555   6999999986622    21  


Q ss_pred             CCCcCCCcEEEEeecC
Q 017679          291 GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 ~e~ik~gavVIDvg~n  306 (368)
                      ...+++|.+|||++..
T Consensus        81 ~~~l~~g~ivid~st~   96 (299)
T PRK12490         81 YPLLSPGDIVVDGGNS   96 (299)
T ss_pred             hccCCCCCEEEECCCC
Confidence            1346789999999764

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme

Probab=96.48  E-value=0.0037  Score=60.39  Aligned_cols=91  Identities=14%  Similarity=0.187  Sum_probs=74.3

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-----------EEEEEeCCC-----------------
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-----------TVSIVHALT-----------------  266 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-----------tVti~h~~t-----------------  266 (368)
                      |-.|++..++-.+.+++..++++.|+|-+ |..++.+|...+.           .+++++++-                 
T Consensus         8 ~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~   86 (254)
T cd00762           8 AVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLA   86 (254)
T ss_pred             HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHH
Confidence            45778889999999999999999999988 9999999877543           588887641                 


Q ss_pred             ---------CCHhhhcc--CCCEEEEecCCCCcccCCCcCC------CcEEEEeecCC
Q 017679          267 ---------KNPEQITS--EADIVIAAAGVANLVRGSWLKP------GAVVLDVGTCP  307 (368)
Q Consensus       267 ---------~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik~------gavVIDvg~n~  307 (368)
                               .+|.+.++  ++|++|-..|.|+.+++|+++.      .-+|+=+. ||
T Consensus        87 ~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NP  143 (254)
T cd00762          87 RFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALS-NP  143 (254)
T ss_pred             HHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECC-Cc
Confidence                     25778888  9999999999999999998853      56777766 44

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=96.48  E-value=0.019  Score=58.89  Aligned_cols=94  Identities=23%  Similarity=0.295  Sum_probs=64.3

Q ss_pred             CHHHHHHHHHHhC--CCCccceEEEEcc----------------CccchHHHHHHHhhCCCEEEEEeCCCC---------
Q 017679          215 TPKGCIELLIRSG--VEIMGKNAVVIGR----------------SNIVGLPTSLLLQRHHATVSIVHALTK---------  267 (368)
Q Consensus       215 Ta~gv~~lL~~~~--i~l~GK~VvVIG~----------------g~~VGrpla~lL~~~gAtVti~h~~t~---------  267 (368)
                      .|.-+++.+++.-  -+++||+|+|.|+                ||.+|+.+|..|..+||+|+++++...         
T Consensus       169 ~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~  248 (399)
T PRK05579        169 EPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVKR  248 (399)
T ss_pred             CHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcEE
Confidence            4455555554332  4689999999998                776699999999999999999876521         


Q ss_pred             -------C----HhhhccCCCEEEEecCCCCccc----CCCcCCC--cEEEEeecCCC
Q 017679          268 -------N----PEQITSEADIVIAAAGVANLVR----GSWLKPG--AVVLDVGTCPV  308 (368)
Q Consensus       268 -------~----L~~~~~~ADIVIsAvG~p~~I~----~e~ik~g--avVIDvg~n~~  308 (368)
                             +    +.+...+.|++|.++|...+-.    ..-+|++  ...+.+--||+
T Consensus       249 ~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pd  306 (399)
T PRK05579        249 IDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPD  306 (399)
T ss_pred             EccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcH
Confidence                   1    1233467899999988655422    2234443  35677776663

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.47  E-value=0.0048  Score=62.69  Aligned_cols=76  Identities=18%  Similarity=0.237  Sum_probs=58.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCC---CCCHhhhccCCCEEEEecCCCC---ccc---C--CCcCCCc
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHAL---TKNPEQITSEADIVIAAAGVAN---LVR---G--SWLKPGA  298 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~---t~~L~~~~~~ADIVIsAvG~p~---~I~---~--e~ik~ga  298 (368)
                      .-.+|+|||-+|.+|..++..|.+. +.+|+.+.+.   ..++.+.+++||+||.|++...   ++.   +  ..+++|+
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~~~~~~l~~l~~~~~~l~~~~   82 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIRHTAALIEEYVALAGGRAAGQ   82 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHHHHHHHHHHHhhhhcCCCCCe
Confidence            4568999998445699999999875 7789888653   3456778999999999998543   232   1  2379999


Q ss_pred             EEEEeecC
Q 017679          299 VVLDVGTC  306 (368)
Q Consensus       299 vVIDvg~n  306 (368)
                      +|.|+|..
T Consensus        83 iVtDVgSv   90 (370)
T PRK08818         83 LWLDVTSI   90 (370)
T ss_pred             EEEECCCC
Confidence            99999975

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=96.46  E-value=0.007  Score=59.83  Aligned_cols=76  Identities=21%  Similarity=0.307  Sum_probs=46.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCCC-
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN-  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p~-  287 (368)
                      .-+++.|||.|.- |+.-+..|.. ++ -+|.+.+++.                    .+.++.+++|||||++|+... 
T Consensus       127 ~~~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~  205 (313)
T PF02423_consen  127 DARTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTP  205 (313)
T ss_dssp             T--EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSE
T ss_pred             CCceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCC
Confidence            3468888888765 7766666554 34 3788887652                    367889999999999999766 


Q ss_pred             --cccCCCcCCCcEEEEeecCC
Q 017679          288 --LVRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 --~I~~e~ik~gavVIDvg~n~  307 (368)
                        +++.+|+++|+.|+-+|.+.
T Consensus       206 ~P~~~~~~l~~g~hi~~iGs~~  227 (313)
T PF02423_consen  206 APVFDAEWLKPGTHINAIGSYT  227 (313)
T ss_dssp             EESB-GGGS-TT-EEEE-S-SS
T ss_pred             CccccHHHcCCCcEEEEecCCC
Confidence              48999999999999999763

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>PRK11891 aspartate carbamoyltransferase; Provisional

Probab=96.45  E-value=0.057  Score=55.95  Aligned_cols=190  Identities=12%  Similarity=0.037  Sum_probs=115.1

Q ss_pred             eeecHHHHHHHHHHHHHHHHHHHHcC--C-----CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC--
Q 017679           76 VIDGKSIAEEIRSGIDKEVRRMKKSI--G-----KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT--  146 (368)
Q Consensus        76 ildGk~ia~~i~~~i~~~v~~l~~~~--g-----~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~--  146 (368)
                      +|+-+.+..+=.+.|-+....+|+..  +     ..-+....++ ..|...+-+ .=..++.++|..+.++.=+.+++  
T Consensus        90 lLsi~Dls~~ei~~Ll~~A~~lK~~~~~~~~~~~L~GK~v~~lF-~epSTRTR~-SFE~A~~~LGg~~i~l~~~~~ss~~  167 (429)
T PRK11891         90 LLSVDQFSRDSVEALFRVADVMQPIARRQKISRVLEGAVLGNLF-FEASTRTRV-SFGAAFCRLGGSVCDTTGFTFSSMA  167 (429)
T ss_pred             ccchhhCCHHHHHHHHHHHHHHHHhhhcCccccccCCcEEEEEe-ccCCchhHH-HHHHHHHHcCCeEEEeCCccccCCC
Confidence            56666665544445555555554311  1     1113333333 234334443 55778899999988773222111  


Q ss_pred             -HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHH
Q 017679          147 -EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLI  224 (368)
Q Consensus       147 -~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~  224 (368)
                       .|-+.+..+-|+.-  +|+|.+-.|  .|-...++.+..       .+-.+|.|-      .+.+.||=+.+ ++.+.+
T Consensus       168 kGESi~DTarvLs~y--~D~IviR~~--~~~~~~e~A~~s-------~vPVINAgd------g~~~HPtQaLaDl~Ti~E  230 (429)
T PRK11891        168 KGESIYDTSRVMSGY--VDALVIRHP--EQGSVAEFARAT-------NLPVINGGD------GPGEHPSQALLDLYTIQR  230 (429)
T ss_pred             CCCCHHHHHHHHHHh--CCEEEEeCC--chhHHHHHHHhC-------CCCEEECCC------CCCCCcHHHHHHHHHHHH
Confidence             23466666666553  788888865  333333333322       244556531      24567998888 555556


Q ss_pred             HhCC---CCccceEEEEccC--ccchHHHHHHHhhC-CCEEEEEeCC---------------------CCCHhhhccCCC
Q 017679          225 RSGV---EIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL---------------------TKNPEQITSEAD  277 (368)
Q Consensus       225 ~~~i---~l~GK~VvVIG~g--~~VGrpla~lL~~~-gAtVti~h~~---------------------t~~L~~~~~~AD  277 (368)
                      +.+.   .++|++|+++|-+  +-|.+.++.+|... |++|++++-.                     +.++.+.++.||
T Consensus       231 ~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~~~G~~v~~~~d~~eav~~AD  310 (429)
T PRK11891        231 EFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQISRNGHVIEQTDDLAAGLRGAD  310 (429)
T ss_pred             HhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHHhcCCeEEEEcCHHHHhCCCC
Confidence            6542   4899999999986  45688888887775 9999998632                     256778899999


Q ss_pred             EEEEecC
Q 017679          278 IVIAAAG  284 (368)
Q Consensus       278 IVIsAvG  284 (368)
                      +|.+..+
T Consensus       311 VVYt~~~  317 (429)
T PRK11891        311 VVYATRI  317 (429)
T ss_pred             EEEEcCc
Confidence            9998554

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=96.44  E-value=0.0052  Score=60.07  Aligned_cols=73  Identities=16%  Similarity=0.235  Sum_probs=56.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCc----c-cCC---
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANL----V-RGS---  292 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~----I-~~e---  292 (368)
                      +|.+||.|.+ |.+++..|.+.|..|++++++.             .+..+..+++|+||.++..+.-    + ..+   
T Consensus         2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~   80 (292)
T PRK15059          2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT   80 (292)
T ss_pred             eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence            5899999986 9999999999999999987642             2445667899999999985431    2 211   


Q ss_pred             -CcCCCcEEEEeecCC
Q 017679          293 -WLKPGAVVLDVGTCP  307 (368)
Q Consensus       293 -~ik~gavVIDvg~n~  307 (368)
                       .+++|.+|||+++..
T Consensus        81 ~~~~~g~ivvd~sT~~   96 (292)
T PRK15059         81 KASLKGKTIVDMSSIS   96 (292)
T ss_pred             ccCCCCCEEEECCCCC
Confidence             357899999998653

>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional

Probab=96.41  E-value=0.073  Score=52.75  Aligned_cols=149  Identities=14%  Similarity=0.191  Sum_probs=97.1

Q ss_pred             cHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccC
Q 017679          118 SQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH  195 (368)
Q Consensus       118 S~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~  195 (368)
                      |..=--.=..++.++|.++.++.-...  ..-|-+.+.++-|+.= ++|+|.+--|  .|-...++.+.       -.+-
T Consensus        56 STRTR~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y-~~D~iv~R~~--~~~~~~~~a~~-------~~vP  125 (305)
T PRK00856         56 STRTRLSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSAM-GADAIVIRHP--QSGAARLLAES-------SDVP  125 (305)
T ss_pred             CcchHHHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhc-CCCEEEEeCC--ChHHHHHHHHH-------CCCC
Confidence            433334567889999998876532210  0123455555555541 3788988865  22222232222       1244


Q ss_pred             cceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhCCCEEEEEeCC-------
Q 017679          196 PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL-------  265 (368)
Q Consensus       196 ~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~gAtVti~h~~-------  265 (368)
                      .+|.|-      .+...||=+.+ ++.+.++.| +++|++|++||-+  +.|.+.++.++...|++|++++-.       
T Consensus       126 VINa~~------g~~~HPtQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~  198 (305)
T PRK00856        126 VINAGD------GSHQHPTQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGM  198 (305)
T ss_pred             EEECCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccc
Confidence            556531      13467998888 555555555 6999999999986  457999999999999999999732       


Q ss_pred             -----CCCHhhhccCCCEEEEec
Q 017679          266 -----TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       266 -----t~~L~~~~~~ADIVIsAv  283 (368)
                           +.++.+.++.||+|.+-.
T Consensus       199 ~~~~~~~d~~ea~~~aDvvyt~~  221 (305)
T PRK00856        199 PEYGVHTDLDEVIEDADVVMMLR  221 (305)
T ss_pred             cceEEECCHHHHhCCCCEEEECC
Confidence                 356788999999998754

>PLN02527 aspartate carbamoyltransferase

Probab=96.40  E-value=0.078  Score=52.57  Aligned_cols=151  Identities=13%  Similarity=0.105  Sum_probs=98.6

Q ss_pred             CcccHHHHHHHHHHHHHcCCeEEEEEcCC-CCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccc
Q 017679          115 RRDSQTYVRNKIKACEEVGIKSIVTEFAD-GCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKD  190 (368)
Q Consensus       115 d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~-~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KD  190 (368)
                      .|.-.+- -.=..++.++|.++.++.-.. +.+   .|-+.+.++-|+.=  +|+|.+-.|  .|-...++.+..     
T Consensus        48 epStRTR-~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~~-----  117 (306)
T PLN02527         48 EPSTRTR-LSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHF--ESGAARRAAATA-----  117 (306)
T ss_pred             CCCchhH-HHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECC--ChhHHHHHHHhC-----
Confidence            4433444 356788999999988775431 111   35577777777663  789999865  333333333332     


Q ss_pred             cCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccC-c-cchHHHHHHHhhC-CCEEEEEeCC--
Q 017679          191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS-N-IVGLPTSLLLQRH-HATVSIVHAL--  265 (368)
Q Consensus       191 VDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g-~-~VGrpla~lL~~~-gAtVti~h~~--  265 (368)
                        .+-.+|.|-      .....||=+.+=+--++++..+++|++|+++|-+ + -|.+.++..|... |++|++++-.  
T Consensus       118 --~vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~  189 (306)
T PLN02527        118 --EIPVINAGD------GPGQHPTQALLDVYTIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVV  189 (306)
T ss_pred             --CCCEEECCC------CCCCChHHHHHHHHHHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCcc
Confidence              134456531      2346799888844444443346999999999976 3 2688888888776 8999998632  


Q ss_pred             -------------------CCCHhhhccCCCEEEEec
Q 017679          266 -------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       266 -------------------t~~L~~~~~~ADIVIsAv  283 (368)
                                         +.++++.++.||+|.+-.
T Consensus       190 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~  226 (306)
T PLN02527        190 KMKDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTR  226 (306)
T ss_pred             CCCHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence                               246789999999999843

>PRK14031 glutamate dehydrogenase; Provisional

Probab=96.38  E-value=0.027  Score=58.55  Aligned_cols=52  Identities=25%  Similarity=0.224  Sum_probs=43.6

Q ss_pred             cccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          211 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       211 ~~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      -.+.|.+|+...    +++.+.+++||+|+|.|.|+ ||..++.+|.+.||+|+.+.
T Consensus       203 r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGN-VG~~aA~~L~e~GAkVVaVS  258 (444)
T PRK14031        203 RPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGN-VAQYTAEKVLELGGKVVTMS  258 (444)
T ss_pred             CCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEE
Confidence            347898886655    55678999999999999887 59999999999999988743

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.37  E-value=0.0038  Score=52.87  Aligned_cols=74  Identities=24%  Similarity=0.274  Sum_probs=50.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCC-CE-EEEEeCCC---CCH-------------------hhhccCCCEEEEecCCC--C
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH-AT-VSIVHALT---KNP-------------------EQITSEADIVIAAAGVA--N  287 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g-At-Vti~h~~t---~~L-------------------~~~~~~ADIVIsAvG~p--~  287 (368)
                      ||.|||++|.+|+-+..+|+++- .+ +.++.++.   +.+                   .+.+.++|+||.|++.-  .
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~   80 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK   80 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence            68999988889999999999864 44 44444433   111                   13468999999998742  1


Q ss_pred             cccCCCcCCCcEEEEeecCC
Q 017679          288 LVRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 ~I~~e~ik~gavVIDvg~n~  307 (368)
                      -+-+..+++|..|||.+...
T Consensus        81 ~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   81 ELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             HHHHHHHHTTSEEEESSSTT
T ss_pred             HHHHHHhhCCcEEEeCCHHH
Confidence            13334478899999998765

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.35  E-value=0.0072  Score=52.98  Aligned_cols=53  Identities=26%  Similarity=0.419  Sum_probs=43.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC------------------------CCHhhhccCCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t------------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      ||+|||+++.||..++.+|...+.  ++.++....                        .+..+.+++|||||.+.|.|
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~   80 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP   80 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence            799999966789999999998873  788887662                        24568899999999999976

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.35  E-value=0.0081  Score=57.05  Aligned_cols=60  Identities=12%  Similarity=0.155  Sum_probs=45.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCH-----------------hhhccCCCEEEEecCCCCc
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVANL  288 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L-----------------~~~~~~ADIVIsAvG~p~~  288 (368)
                      ++++|++|+|||.|.+ |.-=+..|++.||.||++.-.- +++                 .+.+..+++||.||+.+.+
T Consensus        21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~v   98 (223)
T PRK05562         21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEKL   98 (223)
T ss_pred             EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHHH
Confidence            4567999999998775 7776778889999999995432 121                 1346789999999987653

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e

Probab=96.27  E-value=0.0059  Score=59.09  Aligned_cols=91  Identities=14%  Similarity=0.243  Sum_probs=70.7

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhC----CC-------EEEEEeCCC-----------------
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HA-------TVSIVHALT-----------------  266 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~----gA-------tVti~h~~t-----------------  266 (368)
                      |-.|++..++-.+.+|+..+++++|+|-+ |..++.+|...    |.       .+++++++-                 
T Consensus         8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a   86 (255)
T PF03949_consen    8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA   86 (255)
T ss_dssp             HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence            44678889999999999999999999987 99999888766    76       388997650                 


Q ss_pred             ---------CCHhhhccCC--CEEEEecCCCCcccCCCcCC------CcEEEEeecCC
Q 017679          267 ---------KNPEQITSEA--DIVIAAAGVANLVRGSWLKP------GAVVLDVGTCP  307 (368)
Q Consensus       267 ---------~~L~~~~~~A--DIVIsAvG~p~~I~~e~ik~------gavVIDvg~n~  307 (368)
                               .+|.+.++++  |++|-..|.|+.+++|+++.      .-+|+=+. ||
T Consensus        87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LS-NP  143 (255)
T PF03949_consen   87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLS-NP  143 (255)
T ss_dssp             BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-S-SS
T ss_pred             ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECC-CC
Confidence                     2788999999  99999999999999998854      45777766 44

g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....

>TIGR03316 ygeW probable carbamoyltransferase YgeW

Probab=96.25  E-value=0.084  Score=53.52  Aligned_cols=165  Identities=17%  Similarity=0.114  Sum_probs=101.3

Q ss_pred             EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCC---CCCCHH
Q 017679          106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLP---QHLDEG  179 (368)
Q Consensus       106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp---~~id~~  179 (368)
                      +....++= .|...+-. .=..++.++|.++.++.- .+++   -|-+.+.++-|+.-  +|+|.+-.|-.   .|-..+
T Consensus        43 k~v~~lF~-epSTRTR~-SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~  117 (357)
T TIGR03316        43 GLGISLFR-DNSTRTRF-SFASAMNLLGLHAQDLDE-GKSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMR  117 (357)
T ss_pred             CEEEEEEc-CCCcchHH-HHHHHHHHcCCcEEEeCC-ccccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHH
Confidence            34444443 34333333 556788999999988753 2211   24566777777663  78999987642   222112


Q ss_pred             HHHhcCC-cccc-cC--ccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCC--CCccceEEEEcc-------Cccch
Q 017679          180 KILDAVS-LEKD-VD--GFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV--EIMGKNAVVIGR-------SNIVG  245 (368)
Q Consensus       180 ~il~~I~-p~KD-VD--gl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i--~l~GK~VvVIG~-------g~~VG  245 (368)
                      ++.+... --|| |-  .+-.+|.|       ...+.||=+.+ ++.+.++.|.  .++|++|+++|.       +..|.
T Consensus       118 ~~a~~~~~~~~~~~~~s~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~  190 (357)
T TIGR03316       118 EVAKYVQEGYKDGVLEQRPPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVP  190 (357)
T ss_pred             HHHHhhhhccccccccCCCCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHH
Confidence            3333311 1122 10  13345653       23467998888 5555556663  489999999964       33567


Q ss_pred             HHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEe
Q 017679          246 LPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       246 rpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsA  282 (368)
                      +.++.++...|++|++++-.                         +.++.+.+++||+|.+-
T Consensus       191 ~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~  252 (357)
T TIGR03316       191 QGIIGLMTRFGMDVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPK  252 (357)
T ss_pred             HHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence            88888899999999999743                         13566788999998865

Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.

>PRK08192 aspartate carbamoyltransferase; Provisional

Probab=96.24  E-value=0.08  Score=53.25  Aligned_cols=151  Identities=15%  Similarity=0.066  Sum_probs=95.8

Q ss_pred             CcccHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCccccc
Q 017679          115 RRDSQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV  191 (368)
Q Consensus       115 d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDV  191 (368)
                      .|.-.+.+ .=..++.++|.++.++.=+.++   ..|-+.+.++-|+.-  +|+|.+-.|  .|-...++.+..      
T Consensus        53 epSTRTR~-SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~--~~~~~~~~a~~~------  121 (338)
T PRK08192         53 EPSTRTRV-SFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHP--DAGSVKEFAEGS------  121 (338)
T ss_pred             CCCcchHH-HHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCC--chhHHHHHHHhC------
Confidence            35445544 4567899999998754222221   124566666666653  789999865  323333333321      


Q ss_pred             CccCcceeeeccccCCcCccccCCHHH-HHHHHHHh---CCCCccceEEEEccC--ccchHHHHHHHhhC-CCEEEEEeC
Q 017679          192 DGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRS---GVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHA  264 (368)
Q Consensus       192 Dgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~---~i~l~GK~VvVIG~g--~~VGrpla~lL~~~-gAtVti~h~  264 (368)
                       .+-.+|.|.      .+.+.||=+.+ ++.+.++.   |-+++|++|++||-+  +-|...++.+|... |++|++++-
T Consensus       122 -~vPVINa~~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P  194 (338)
T PRK08192        122 -RVPVINGGD------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSP  194 (338)
T ss_pred             -CCCEEECCC------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECC
Confidence             134556431      13567998888 45554543   347999999999986  44577777666644 899998863


Q ss_pred             C---------------------CCCHhhhccCCCEEEEec
Q 017679          265 L---------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       265 ~---------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      .                     +.++.+.+++||+|.+..
T Consensus       195 ~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~  234 (338)
T PRK08192        195 KELAMPDYVISDIENAGHKITITDQLEGNLDKADILYLTR  234 (338)
T ss_pred             ccccCCHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEEcC
Confidence            2                     246778999999999853

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=96.22  E-value=0.0085  Score=61.82  Aligned_cols=123  Identities=20%  Similarity=0.146  Sum_probs=74.5

Q ss_pred             CccceEEEEccCccchHH-HHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCc-CCCcEEEEeecCC
Q 017679          230 IMGKNAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWL-KPGAVVLDVGTCP  307 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrp-la~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~i-k~gavVIDvg~n~  307 (368)
                      .++|+++|+|.|+. |+. +|.+|.++|++|+++..+.....+.+++..+.+.. |.+    .+.+ ....+|+--|+++
T Consensus         5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~----~~~~~~~d~vv~spgi~~   78 (461)
T PRK00421          5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI-GHD----AENIKDADVVVYSSAIPD   78 (461)
T ss_pred             CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHCCCCCEEEECCCCCC
Confidence            47899999999998 999 79999999999999987543222234443443322 221    1122 1245565555554


Q ss_pred             CCCCCCCCCCCCcEEEcccchhh-hhc--cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          308 VDVSVDPSCEYGYRLMGDVCYEE-AMR--LASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       308 ~~~~~d~t~~~~~kl~GDVd~~~-~~~--~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      .......-.+.+-++.++.++-. ..+  ..-   -|-|=-|.-|+..|+.++++.+
T Consensus        79 ~~~~~~~a~~~~i~i~~~~e~~~~~~~~~~~I---~ITGTnGKTTTt~ll~~iL~~~  132 (461)
T PRK00421         79 DNPELVAARELGIPVVRRAEMLAELMRFRTSI---AVAGTHGKTTTTSLLAHVLAEA  132 (461)
T ss_pred             CCHHHHHHHHCCCcEEeHHHHHHHHHccCcEE---EEECCCCHHHHHHHHHHHHHhc
Confidence            31000000011336888888732 211  223   3447778999999999999765

>PRK13529 malate dehydrogenase; Provisional

Probab=96.20  E-value=0.022  Score=60.56  Aligned_cols=139  Identities=14%  Similarity=0.172  Sum_probs=95.8

Q ss_pred             HHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhC
Q 017679          148 DEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSG  227 (368)
Q Consensus       148 ~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~  227 (368)
                      +|+.++++++-  |++   +||+==.+.-+--++++...  +++-.||          +...|---++-.|++..++-.+
T Consensus       228 defv~av~~~~--P~~---~I~~EDf~~~~af~iL~ryr--~~i~~Fn----------DDiQGTaaV~LAgll~A~r~~g  290 (563)
T PRK13529        228 DEFVQAVKRRF--PNA---LLQFEDFAQKNARRILERYR--DEICTFN----------DDIQGTGAVTLAGLLAALKITG  290 (563)
T ss_pred             HHHHHHHHHhC--CCe---EEehhhcCCchHHHHHHHhc--cCCCeec----------cccchHHHHHHHHHHHHHHHhC
Confidence            56777776665  443   55542222223344444432  2333332          1123333456688999999999


Q ss_pred             CCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCCC------------------------------
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHALT------------------------------  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~t------------------------------  266 (368)
                      .+++..++++.|+|.+ |..+|.+|..    +|.       .+++|+++-                              
T Consensus       291 ~~l~d~riv~~GAGsA-giGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~  369 (563)
T PRK13529        291 EPLSDQRIVFLGAGSA-GCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEG  369 (563)
T ss_pred             CChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhccccccccccc
Confidence            9999999999999988 9999999886    575       688887640                              


Q ss_pred             --CCHhhhccCC--CEEEEecCCCCcccCCCcCC------CcEEEEee
Q 017679          267 --KNPEQITSEA--DIVIAAAGVANLVRGSWLKP------GAVVLDVG  304 (368)
Q Consensus       267 --~~L~~~~~~A--DIVIsAvG~p~~I~~e~ik~------gavVIDvg  304 (368)
                        .+|.+.++.+  |++|-..|.|+.+++++++.      .-+|+=++
T Consensus       370 ~~~~L~e~v~~~kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS  417 (563)
T PRK13529        370 DVISLLEVVRNVKPTVLIGVSGQPGAFTEEIVKEMAAHCERPIIFPLS  417 (563)
T ss_pred             CCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC
Confidence              2577888888  99999999899999988754      56776666

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.19  E-value=0.01  Score=61.43  Aligned_cols=72  Identities=21%  Similarity=0.319  Sum_probs=55.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------CHhhhccCCCEEEEecCCCC---ccc--CCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITSEADIVIAAAGVAN---LVR--GSW  293 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~L~~~~~~ADIVIsAvG~p~---~I~--~e~  293 (368)
                      ++.|||..|.+|..++..|.+.|..|+++.++..               +..+.+.+||+||.+++...   .+.  ...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~~l~~~   81 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIKEVAPH   81 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHHHHHhh
Confidence            6899984334599999999999999999876532               44566789999999997432   221  245


Q ss_pred             cCCCcEEEEeec
Q 017679          294 LKPGAVVLDVGT  305 (368)
Q Consensus       294 ik~gavVIDvg~  305 (368)
                      +++|++|+|++.
T Consensus        82 l~~~~iViDvsS   93 (437)
T PRK08655         82 VKEGSLLMDVTS   93 (437)
T ss_pred             CCCCCEEEEccc
Confidence            788999999996

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.19  E-value=0.0086  Score=62.53  Aligned_cols=126  Identities=20%  Similarity=0.178  Sum_probs=66.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCPV  308 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~~  308 (368)
                      +.||+|+|+|.|.. |++++.+|.++|++|+++......+.. +++..+-+...+.+    .+.++ .+.+|.--|+++.
T Consensus        10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~~~~~~~-l~~~g~~~~~~~~~----~~~l~~~D~VV~SpGi~~~   83 (488)
T PRK03369         10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDDPDALRP-HAERGVATVSTSDA----VQQIADYALVVTSPGFRPT   83 (488)
T ss_pred             cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHH-HHhCCCEEEcCcch----HhHhhcCCEEEECCCCCCC
Confidence            37899999999997 999999999999999998855322221 22111111110000    01111 1223333333321


Q ss_pred             CCCCCCCCCCCcEEEcccchhhhhccc------eEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          309 DVSVDPSCEYGYRLMGDVCYEEAMRLA------SVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       309 ~~~~d~t~~~~~kl~GDVd~~~~~~~a------~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      .+....-.+.+-+++|++++.......      ..+--|-|-.|.-|+.-|+.++++.+
T Consensus        84 ~p~~~~a~~~gi~v~~~iel~~~~~~~~~~~~~~~vIgITGTnGKTTTt~li~~iL~~~  142 (488)
T PRK03369         84 APVLAAAAAAGVPIWGDVELAWRLDAAGCYGPPRRWLVVTGTNGKTTTTSMLHAMLIAA  142 (488)
T ss_pred             CHHHHHHHHCCCcEeeHHHHhhhhhhhhccCCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence            100000001123577877763211000      01113558889999999999998764

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.17  E-value=0.0095  Score=60.83  Aligned_cols=37  Identities=27%  Similarity=0.432  Sum_probs=33.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+|+|+|.|. +|.++|..|+++|++|+++.+..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~   38 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE   38 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence            46899999999999 59999999999999999998764

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.14  E-value=0.0099  Score=58.54  Aligned_cols=72  Identities=17%  Similarity=0.175  Sum_probs=55.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------CCHhhhccCCCEEEEecC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      .+|.|||.|.+ |.+++..|++.|..|++++++.                            .++.+.++++|+||.++.
T Consensus         5 m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~   83 (328)
T PRK14618          5 MRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP   83 (328)
T ss_pred             CeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence            47999999876 9999999999999999998742                            134456788999999997


Q ss_pred             CCCccc-CCCcCCCcEEEEeec
Q 017679          285 VANLVR-GSWLKPGAVVLDVGT  305 (368)
Q Consensus       285 ~p~~I~-~e~ik~gavVIDvg~  305 (368)
                      ...+-. -+.++++.++||+..
T Consensus        84 ~~~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         84 SKALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             hHHHHHHHHhcCcCCEEEEEee
Confidence            654311 134678889999864

>PRK00779 ornithine carbamoyltransferase; Provisional

Probab=96.14  E-value=0.15  Score=50.46  Aligned_cols=147  Identities=14%  Similarity=0.110  Sum_probs=97.5

Q ss_pred             cHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccC
Q 017679          118 SQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH  195 (368)
Q Consensus       118 S~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~  195 (368)
                      |.-=--.=..++.++|.++.++.-...  ...|.+.+.++-|+.-  +|+|.+-.|-  +-....+.+.       -++-
T Consensus        54 STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~~--~~~~~~~a~~-------~~vP  122 (304)
T PRK00779         54 STRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTFE--HETLEELAEY-------STVP  122 (304)
T ss_pred             CchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCCC--hhHHHHHHHh-------CCCC
Confidence            433334567899999998887643211  0134577777777764  7888887652  2222222222       2245


Q ss_pred             cceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------
Q 017679          196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------  265 (368)
Q Consensus       196 ~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------  265 (368)
                      .+|.|.       ....||=+.+=+--++++...++|++++++|..+-|.+.++.+|...|++|++|+-.          
T Consensus       123 VINag~-------~~~HPtQaL~Dl~Ti~e~~g~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~  195 (304)
T PRK00779        123 VINGLT-------DLSHPCQILADLLTIYEHRGSLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEIVE  195 (304)
T ss_pred             EEeCCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHHHH
Confidence            667642       235688777744444443346999999999986668999999999999999999632          


Q ss_pred             ------------CCCHhhhccCCCEEEEe
Q 017679          266 ------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       266 ------------t~~L~~~~~~ADIVIsA  282 (368)
                                  +.++.+.+++||+|.+-
T Consensus       196 ~~~~~~g~~~~~~~d~~~a~~~aDvvy~~  224 (304)
T PRK00779        196 KIAKETGASIEVTHDPKEAVKGADVVYTD  224 (304)
T ss_pred             HHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence                        24667889999999975

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.13  E-value=0.0093  Score=57.83  Aligned_cols=71  Identities=18%  Similarity=0.267  Sum_probs=52.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC----EEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCcc----
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA----TVSIVHALT---------------KNPEQITSEADIVIAAAGVANLV----  289 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA----tVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~I----  289 (368)
                      +++.+||.|.+ |.+++..|.+.|.    +|++++++.               .+..+.+++||+||.++. |..+    
T Consensus         3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavk-P~~~~~vl   80 (272)
T PRK12491          3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIK-PDLYSSVI   80 (272)
T ss_pred             CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeC-hHHHHHHH
Confidence            47999999886 9999999998773    688887642               234456789999999997 4422    


Q ss_pred             c--CCCcCCCcEEEEeec
Q 017679          290 R--GSWLKPGAVVLDVGT  305 (368)
Q Consensus       290 ~--~e~ik~gavVIDvg~  305 (368)
                      .  .+.++++.+|||+.-
T Consensus        81 ~~l~~~~~~~~lvISi~A   98 (272)
T PRK12491         81 NQIKDQIKNDVIVVTIAA   98 (272)
T ss_pred             HHHHHhhcCCcEEEEeCC
Confidence            1  134677889999863

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.12  E-value=0.009  Score=58.37  Aligned_cols=73  Identities=18%  Similarity=0.143  Sum_probs=54.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------CH---hhhccCCCEEEEecCCCC---ccc--C
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NP---EQITSEADIVIAAAGVAN---LVR--G  291 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------~L---~~~~~~ADIVIsAvG~p~---~I~--~  291 (368)
                      +|.|||.|.. |.+++..|.+.|.+|++.+++..              ++   .+.+.++|+||.++....   .+.  .
T Consensus         2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~~l~   80 (298)
T TIGR00872         2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLEELA   80 (298)
T ss_pred             EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHHHHH
Confidence            6899999886 99999999999999999887631              22   234567899999987642   121  1


Q ss_pred             CCcCCCcEEEEeecCC
Q 017679          292 SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       292 e~ik~gavVIDvg~n~  307 (368)
                      ..+++|.+|||++...
T Consensus        81 ~~l~~g~ivid~st~~   96 (298)
T TIGR00872        81 PTLEKGDIVIDGGNSY   96 (298)
T ss_pred             hhCCCCCEEEECCCCC
Confidence            3468899999998653

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK08507 prephenate dehydrogenase; Validated

Probab=96.12  E-value=0.012  Score=56.64  Aligned_cols=70  Identities=19%  Similarity=0.240  Sum_probs=51.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCc---cc--C
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT---------------KNPEQITSEADIVIAAAGVANL---VR--G  291 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~---I~--~  291 (368)
                      ++.|||.|.+ |.+++..|.+.|.  +|++++++.               .+..+ +.+||+||.+++....   +.  .
T Consensus         2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~-~~~aD~Vilavp~~~~~~~~~~l~   79 (275)
T PRK08507          2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEE-LKKCDVIFLAIPVDAIIEILPKLL   79 (275)
T ss_pred             EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHH-HhcCCEEEEeCcHHHHHHHHHHHh
Confidence            6899999876 9999999998885  788777642               23344 3459999999985432   21  1


Q ss_pred             CCcCCCcEEEEeecC
Q 017679          292 SWLKPGAVVLDVGTC  306 (368)
Q Consensus       292 e~ik~gavVIDvg~n  306 (368)
                      . ++++.+|+|+|..
T Consensus        80 ~-l~~~~iv~d~gs~   93 (275)
T PRK08507         80 D-IKENTTIIDLGST   93 (275)
T ss_pred             c-cCCCCEEEECccc
Confidence            2 7889999999875

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.11  E-value=0.014  Score=56.89  Aligned_cols=73  Identities=19%  Similarity=0.252  Sum_probs=55.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccC---CCEEEEecCCCCc----cc--
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSE---ADIVIAAAGVANL----VR--  290 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~---ADIVIsAvG~p~~----I~--  290 (368)
                      +|.|||.|.+ |.+++..|++.|.+|++++++.              .+..+.++.   +|+||+++.....    +.  
T Consensus         2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~l   80 (301)
T PRK09599          2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDEL   80 (301)
T ss_pred             EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHHH
Confidence            6899999986 9999999999999999998763              234444544   6999999876532    21  


Q ss_pred             CCCcCCCcEEEEeecCC
Q 017679          291 GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       291 ~e~ik~gavVIDvg~n~  307 (368)
                      .+.+++|.++||.+...
T Consensus        81 ~~~l~~g~ivid~st~~   97 (301)
T PRK09599         81 APLLSPGDIVIDGGNSY   97 (301)
T ss_pred             HhhCCCCCEEEeCCCCC
Confidence            23567899999997643

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.10  E-value=0.014  Score=59.51  Aligned_cols=126  Identities=21%  Similarity=0.254  Sum_probs=70.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---HhhhccCCCEEEEecCC-CCcccCCCcC--CCcEEEE
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---PEQITSEADIVIAAAGV-ANLVRGSWLK--PGAVVLD  302 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---L~~~~~~ADIVIsAvG~-p~~I~~e~ik--~gavVID  302 (368)
                      +++||+++|+|.|+ .|+.+|..|+++|++|+++.++...   ..+.+....+-+. .|. +.    +.+.  ...+|.-
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~-~~~~~~----~~~~~~~d~vV~s   75 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI-CGSHPL----ELLDEDFDLMVKN   75 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE-eCCCCH----HHhcCcCCEEEEC
Confidence            36799999999999 5999999999999999999765321   1122222222111 111 10    0111  2334444


Q ss_pred             eecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          303 VGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       303 vg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      -|+++.......-.+.+-+++++.++....... .+--|-|--|.-|+..|+.++++.+
T Consensus        76 ~gi~~~~~~~~~a~~~~i~v~~~~el~~~~~~~-~~I~VTGT~GKTTTt~ll~~iL~~~  133 (447)
T PRK02472         76 PGIPYTNPMVEKALEKGIPIITEVELAYLISEA-PIIGITGSNGKTTTTTLIGEMLKAG  133 (447)
T ss_pred             CCCCCCCHHHHHHHHCCCcEEeHHHHHHHhcCC-CEEEEeCCCchHHHHHHHHHHHHHC
Confidence            444432100000001133577877763221111 1224568889999999999998764

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.09  E-value=0.0089  Score=51.94  Aligned_cols=72  Identities=22%  Similarity=0.282  Sum_probs=47.8

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc------c
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL------V  289 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~------I  289 (368)
                      --+|.|||+|++ |..++.+|.+.|..|.-+.+++                .++.+.+++||++|-+++--.+      +
T Consensus        10 ~l~I~iIGaGrV-G~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~L   88 (127)
T PF10727_consen   10 RLKIGIIGAGRV-GTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQL   88 (127)
T ss_dssp             --EEEEECTSCC-CCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHHH
T ss_pred             ccEEEEECCCHH-HHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHHH
Confidence            358999999985 9999999999999988887653                2456778999999999974321      2


Q ss_pred             -cCCCcCCCcEEEEee
Q 017679          290 -RGSWLKPGAVVLDVG  304 (368)
Q Consensus       290 -~~e~ik~gavVIDvg  304 (368)
                       ....+++|.+|+=+.
T Consensus        89 a~~~~~~~g~iVvHtS  104 (127)
T PF10727_consen   89 AQYGAWRPGQIVVHTS  104 (127)
T ss_dssp             HCC--S-TT-EEEES-
T ss_pred             HHhccCCCCcEEEECC
Confidence             222467888887654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.09  E-value=0.012  Score=56.77  Aligned_cols=71  Identities=11%  Similarity=0.234  Sum_probs=53.2

Q ss_pred             cceEEEEccCccchHHHHHHHhhCC----CEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc---
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL---  288 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~---  288 (368)
                      +.++.+||.|.. |.+++..|.+.|    ..|++++++.                .+..+.+++||+||.++....+   
T Consensus         3 ~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~v   81 (279)
T PRK07679          3 IQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEA   81 (279)
T ss_pred             CCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHHH
Confidence            458999999886 999999999887    5788887742                1334567899999999974332   


Q ss_pred             cc--CCCcCCCcEEEEe
Q 017679          289 VR--GSWLKPGAVVLDV  303 (368)
Q Consensus       289 I~--~e~ik~gavVIDv  303 (368)
                      +.  .+.++++.+|||+
T Consensus        82 l~~l~~~~~~~~liIs~   98 (279)
T PRK07679         82 LIPFKEYIHNNQLIISL   98 (279)
T ss_pred             HHHHHhhcCCCCEEEEE
Confidence            21  1346778999997

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.07  E-value=0.012  Score=58.97  Aligned_cols=70  Identities=21%  Similarity=0.219  Sum_probs=53.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC---ccc--
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN---LVR--  290 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~---~I~--  290 (368)
                      ++||+|.|||.|.+ |+++|..|...|.+|.+..+..              .+..+.+++||+|+.+++...   ++.  
T Consensus        15 L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~   93 (330)
T PRK05479         15 IKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE   93 (330)
T ss_pred             hCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence            68999999999986 9999999999999998876542              256678899999999997322   221  


Q ss_pred             -CCCcCCCcEE
Q 017679          291 -GSWLKPGAVV  300 (368)
Q Consensus       291 -~e~ik~gavV  300 (368)
                       ...+++|++|
T Consensus        94 I~~~Lk~g~iL  104 (330)
T PRK05479         94 IEPNLKEGAAL  104 (330)
T ss_pred             HHhcCCCCCEE
Confidence             1346778765

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.07  E-value=0.012  Score=57.15  Aligned_cols=71  Identities=18%  Similarity=0.302  Sum_probs=53.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------CCHhhhccCCCEEEEecC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      .+|.|||.|.+ |.+++..|++.|.+|+++++..                            .+..+.++++|+||.++.
T Consensus         2 mkI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~   80 (325)
T PRK00094          2 MKIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP   80 (325)
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence            37999999875 9999999999999999997642                            133456679999999998


Q ss_pred             CCCc---cc--CCCcCCCcEEEEee
Q 017679          285 VANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       285 ~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      ....   +.  ...++++.+||++.
T Consensus        81 ~~~~~~v~~~l~~~~~~~~~vi~~~  105 (325)
T PRK00094         81 SQALREVLKQLKPLLPPDAPIVWAT  105 (325)
T ss_pred             HHHHHHHHHHHHhhcCCCCEEEEEe
Confidence            6432   11  13567889999993

>PRK07589 ornithine cyclodeaminase; Validated

Probab=96.04  E-value=0.015  Score=58.52  Aligned_cols=76  Identities=13%  Similarity=0.195  Sum_probs=55.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCCC-
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN-  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p~-  287 (368)
                      .-+++.|||.|.- ++.-+..+.. +. -+|++.+++.                    .++++.+++||||+++|++.. 
T Consensus       128 da~~l~iiGaG~Q-A~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~  206 (346)
T PRK07589        128 DSRTMALIGNGAQ-SEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTN  206 (346)
T ss_pred             CCcEEEEECCcHH-HHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCC
Confidence            3467888888765 7665554443 23 3677776652                    357788999999999998643 


Q ss_pred             --cccCCCcCCCcEEEEeecCC
Q 017679          288 --LVRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 --~I~~e~ik~gavVIDvg~n~  307 (368)
                        +++.+|++||+.|.=+|.+.
T Consensus       207 ~Pvl~~~~lkpG~hV~aIGs~~  228 (346)
T PRK07589        207 ATILTDDMVEPGMHINAVGGDC  228 (346)
T ss_pred             CceecHHHcCCCcEEEecCCCC
Confidence              47999999999999999653

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.02  E-value=0.016  Score=59.03  Aligned_cols=72  Identities=28%  Similarity=0.330  Sum_probs=54.7

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------------------------------CHhhhccCCCEE
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------------------NPEQITSEADIV  279 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------------------------~L~~~~~~ADIV  279 (368)
                      +|.|||.|.+ |.++|..|++.|.+|++++++..                                  ++.+.+++||+|
T Consensus         2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv   80 (411)
T TIGR03026         2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI   80 (411)
T ss_pred             EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence            6899999875 99999999999999999976421                                  223457889999


Q ss_pred             EEecCCCCc---------cc------CCCcCCCcEEEEeecC
Q 017679          280 IAAAGVANL---------VR------GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       280 IsAvG~p~~---------I~------~e~ik~gavVIDvg~n  306 (368)
                      |.+++.|.-         +.      ...+++|.+|||.++-
T Consensus        81 ii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv  122 (411)
T TIGR03026        81 IICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTV  122 (411)
T ss_pred             EEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcC
Confidence            999997731         11      1245789999998753

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated

Probab=96.01  E-value=0.18  Score=51.86  Aligned_cols=167  Identities=16%  Similarity=0.146  Sum_probs=103.5

Q ss_pred             EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCC---CCCCCHHH
Q 017679          106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPL---PQHLDEGK  180 (368)
Q Consensus       106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPL---p~~id~~~  180 (368)
                      ++++.++= .|...+- -.=..++.++|.++.++.-...  ..-|-+.+.++-|+.-  +|+|.+-.|-   ..|-...+
T Consensus        60 ~~~~~lF~-epSTRTR-~SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~e  135 (395)
T PRK07200         60 GLGISVFR-DNSTRTR-FSYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMRE  135 (395)
T ss_pred             CeEEEEEc-CCCchhH-HHHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHH
Confidence            44443443 3433333 3557889999999887743211  0124566777777663  8999998774   22222233


Q ss_pred             HHhcCCc--cccc-CccC-cceeeeccccCCcCccccCCHHH-HHHHHHHhCC--CCccceEEEEc-------cCccchH
Q 017679          181 ILDAVSL--EKDV-DGFH-PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV--EIMGKNAVVIG-------RSNIVGL  246 (368)
Q Consensus       181 il~~I~p--~KDV-Dgl~-~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i--~l~GK~VvVIG-------~g~~VGr  246 (368)
                      +.+...-  .++| -..- .+|.+       .+...||=+.+ ++.+.++.|-  .++|++|+++|       ++..|.+
T Consensus       136 la~~~~~~~~~~~~~~~pPVINa~-------~~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~  208 (395)
T PRK07200        136 VGAAVDDGYKQGVLPQRPTLVNLQ-------CDIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQ  208 (395)
T ss_pred             HHHHhhhhcccccccCCCeEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHH
Confidence            3222211  0111 1222 25652       23467998888 5555566653  38999999985       4556789


Q ss_pred             HHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEec
Q 017679          247 PTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       247 pla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      .++.+|...|++|++++-.                         +.++.+.++.||+|.+-+
T Consensus       209 Sl~~~~~~lG~~v~~~~P~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~  270 (395)
T PRK07200        209 GIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS  270 (395)
T ss_pred             HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence            9999999999999998633                         246778899999999753

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.00  E-value=0.015  Score=57.11  Aligned_cols=53  Identities=21%  Similarity=0.362  Sum_probs=42.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC--CEEEEEeCCCC-------C-----------------HhhhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK-------N-----------------PEQITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t~-------~-----------------L~~~~~~ADIVIsAvG~p  286 (368)
                      ++|.|||+|++ |..++..|+.+|  .+|++++++..       +                 -.+.+++||+||.++|.|
T Consensus         1 ~kI~IIGaG~v-G~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~   79 (306)
T cd05291           1 RKVVIIGAGHV-GSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP   79 (306)
T ss_pred             CEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence            47999999875 999999999998  37999986421       1                 124578999999999976

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.00  E-value=0.013  Score=56.76  Aligned_cols=73  Identities=15%  Similarity=0.207  Sum_probs=54.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC--------------------------------------CCCHhhhcc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------------------------------TKNPEQITS  274 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~--------------------------------------t~~L~~~~~  274 (368)
                      ++|.|||.|.+ |.++|..|++.|.+|+++++.                                      +.++.+.++
T Consensus         2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            57999999875 999999999999999999754                                      124556789


Q ss_pred             CCCEEEEecCCCCccc-------CCCcCCCcEE-EEeecC
Q 017679          275 EADIVIAAAGVANLVR-------GSWLKPGAVV-LDVGTC  306 (368)
Q Consensus       275 ~ADIVIsAvG~p~~I~-------~e~ik~gavV-IDvg~n  306 (368)
                      +||+||.+++...-++       .+.+++++++ +|.++-
T Consensus        81 ~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~  120 (288)
T PRK09260         81 DADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTM  120 (288)
T ss_pred             CCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCC
Confidence            9999999998543121       2356778755 666653

>PLN02688 pyrroline-5-carboxylate reductase

Probab=95.96  E-value=0.016  Score=55.15  Aligned_cols=68  Identities=15%  Similarity=0.217  Sum_probs=50.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC----EEEEE-eCCC--------------CCHhhhccCCCEEEEecCCCCcc----c
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA----TVSIV-HALT--------------KNPEQITSEADIVIAAAGVANLV----R  290 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA----tVti~-h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I----~  290 (368)
                      +|.+||.|.+ |.+++..|.+.|.    +|+++ +++.              .+..+.++++|+||.++ .|..+    .
T Consensus         2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v-~~~~~~~vl~   79 (266)
T PLN02688          2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAV-KPQVVKDVLT   79 (266)
T ss_pred             eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEE-CcHHHHHHHH
Confidence            5899999886 9999999999887    88888 6532              24456678999999999 45422    1


Q ss_pred             --CCCcCCCcEEEEe
Q 017679          291 --GSWLKPGAVVLDV  303 (368)
Q Consensus       291 --~e~ik~gavVIDv  303 (368)
                        ...++++.+||.+
T Consensus        80 ~l~~~~~~~~~iIs~   94 (266)
T PLN02688         80 ELRPLLSKDKLLVSV   94 (266)
T ss_pred             HHHhhcCCCCEEEEe
Confidence              1345677777765

>PLN03129 NADP-dependent malic enzyme; Provisional

Probab=95.91  E-value=0.024  Score=60.60  Aligned_cols=94  Identities=13%  Similarity=0.227  Sum_probs=77.1

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh-----CCC-------EEEEEeCCC--------------
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-----HHA-------TVSIVHALT--------------  266 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~-----~gA-------tVti~h~~t--------------  266 (368)
                      -++-.|++..++-.+.+++..+++++|+|.+ |..+|.+|..     .|.       .+++++++-              
T Consensus       302 aV~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k  380 (581)
T PLN03129        302 AVALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFK  380 (581)
T ss_pred             HHHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHH
Confidence            4566889999999999999999999999988 9999998876     354       688886541              


Q ss_pred             ----------CCHhhhccC--CCEEEEecCCCCcccCCCcC------CCcEEEEeecCCC
Q 017679          267 ----------KNPEQITSE--ADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV  308 (368)
Q Consensus       267 ----------~~L~~~~~~--ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~~  308 (368)
                                .+|.+.++.  +|++|-+.+.++.+++++++      +.-+|+=++ ||.
T Consensus       381 ~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~~rPIIFaLS-NPt  439 (581)
T PLN03129        381 KPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIFALS-NPT  439 (581)
T ss_pred             HHHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence                      267788888  99999999999999999886      567787776 443

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.012  Score=54.46  Aligned_cols=39  Identities=26%  Similarity=0.320  Sum_probs=34.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~   43 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV   43 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            458899999999988899999999999999999887654

>PRK10637 cysG siroheme synthase; Provisional

Probab=95.81  E-value=0.015  Score=60.47  Aligned_cols=113  Identities=13%  Similarity=0.197  Sum_probs=69.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-CCCH-----------------hhhccCCCEEEEecCCCCc-
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-TKNP-----------------EQITSEADIVIAAAGVANL-  288 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-t~~L-----------------~~~~~~ADIVIsAvG~p~~-  288 (368)
                      ++++||+|+|||.|.+ +.-=+..|++.||.|||+... ++++                 .+.+..+++||.||+.+.+ 
T Consensus         8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n   86 (457)
T PRK10637          8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDAVN   86 (457)
T ss_pred             EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHHHh
Confidence            5799999999998775 777677888999999998533 1222                 2446789999999987643 


Q ss_pred             --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHHHHHHHHH
Q 017679          289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTL  358 (368)
Q Consensus       289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~amLl~N~v  358 (368)
                        |....-+.| +.+++.-++..              +|+-|....+.   .-+|+  -||-.|..+..|-+++-
T Consensus        87 ~~i~~~a~~~~-~lvN~~d~~~~--------------~~f~~pa~~~~g~l~iais--T~G~sP~~a~~lr~~ie  144 (457)
T PRK10637         87 QRVSEAAEARR-IFCNVVDAPKA--------------ASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLE  144 (457)
T ss_pred             HHHHHHHHHcC-cEEEECCCccc--------------CeEEEeeEEecCCEEEEEE--CCCCCcHHHHHHHHHHH
Confidence              322221223 44555544321              23333333222   22343  47888888777655443

>PRK06398 aldose dehydrogenase; Validated

Probab=95.79  E-value=0.02  Score=53.80  Aligned_cols=37  Identities=22%  Similarity=0.170  Sum_probs=33.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~   39 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK   39 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            5789999999999889999999999999999987764

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=95.77  E-value=0.021  Score=56.77  Aligned_cols=55  Identities=20%  Similarity=0.249  Sum_probs=44.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      |+||++.|||.|.. |.+++..|.+.|.+|++..+..              .+..+.+++||+||.++.-
T Consensus         1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp   69 (314)
T TIGR00465         1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPD   69 (314)
T ss_pred             CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCc
Confidence            57999999999986 9999999999998877654331              1345678999999999973

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=95.76  E-value=0.016  Score=51.19  Aligned_cols=51  Identities=27%  Similarity=0.296  Sum_probs=43.5

Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhhccCCCEEEEecCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~~~~ADIVIsAvG~  285 (368)
                      |+|+|++|.+|+.++..|+++|.+|+.+.|+..                   .+.+.++.+|.||.++|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            689999888999999999999999999987642                   245677899999999884

...

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=95.75  E-value=0.012  Score=53.89  Aligned_cols=53  Identities=26%  Similarity=0.295  Sum_probs=35.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------CCHhhhccCCCE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI  278 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------~~L~~~~~~ADI  278 (368)
                      ++|+|||.|- ||.|+|..|++.|.+|+.+..+.                                  .+..+.+++||+
T Consensus         1 M~I~ViGlGy-vGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv   79 (185)
T PF03721_consen    1 MKIAVIGLGY-VGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV   79 (185)
T ss_dssp             -EEEEE--ST-THHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred             CEEEEECCCc-chHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence            4899999987 59999999999999999996541                                  234566788888


Q ss_pred             EEEecCCC
Q 017679          279 VIAAAGVA  286 (368)
Q Consensus       279 VIsAvG~p  286 (368)
                      +|.+++.|
T Consensus        80 ~~I~VpTP   87 (185)
T PF03721_consen   80 VFICVPTP   87 (185)
T ss_dssp             EEE----E
T ss_pred             EEEecCCC
Confidence            88888765

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK14030 glutamate dehydrogenase; Provisional

Probab=95.74  E-value=0.1  Score=54.27  Aligned_cols=50  Identities=24%  Similarity=0.288  Sum_probs=42.4

Q ss_pred             ccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEE
Q 017679          212 IPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV  262 (368)
Q Consensus       212 ~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~  262 (368)
                      -+.|.+|++..    +++.+.+++|++|+|=|.|+ ||..+|..|.+.||+|+.+
T Consensus       204 ~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGn-VG~~aA~~L~e~GakvVav  257 (445)
T PRK14030        204 PEATGFGALYFVHQMLETKGIDIKGKTVAISGFGN-VAWGAATKATELGAKVVTI  257 (445)
T ss_pred             CCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence            35798886654    56778899999999999987 5999999999999997774

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.70  E-value=0.019  Score=59.75  Aligned_cols=128  Identities=16%  Similarity=0.163  Sum_probs=73.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCP  307 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~  307 (368)
                      .+.+|+|+|+|.|+. |++++.+|.+.|++|+++.++.....+.+.+..+.+..-+.+    .+++. ...+|+--|+++
T Consensus        12 ~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~----~~~~~~~d~vV~Spgi~~   86 (473)
T PRK00141         12 QELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA----SDQLDSFSLVVTSPGWRP   86 (473)
T ss_pred             cccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc----hhHhcCCCEEEeCCCCCC
Confidence            468899999999998 999999999999999999865332222222223322111111    11222 234555555554


Q ss_pred             CCCCCCCCCCCCcEEEcccchhhhhc------cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          308 VDVSVDPSCEYGYRLMGDVCYEEAMR------LASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       308 ~~~~~d~t~~~~~kl~GDVd~~~~~~------~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      ..+....-.+.+-++.|+.++.....      ....+--|-|=-|.-|+.-|+.++++..
T Consensus        87 ~~p~~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~  146 (473)
T PRK00141         87 DSPLLVDAQSQGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEG  146 (473)
T ss_pred             CCHHHHHHHHCCCceeeHHHHHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhc
Confidence            32000000012346788887632110      0111224558889999999999998764

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=95.68  E-value=0.013  Score=56.73  Aligned_cols=72  Identities=19%  Similarity=0.234  Sum_probs=52.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH-------------------------------------hhhccC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP-------------------------------------EQITSE  275 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L-------------------------------------~~~~~~  275 (368)
                      ++|.|||.|.+ |.++|..|+..|.+|++++++...+                                     .+.+++
T Consensus         5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   83 (295)
T PLN02545          5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRD   83 (295)
T ss_pred             CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCC
Confidence            68999999876 9999999999999999997643111                                     145788


Q ss_pred             CCEEEEecCC-CC----ccc--CCCcCCCcEEE-Eeec
Q 017679          276 ADIVIAAAGV-AN----LVR--GSWLKPGAVVL-DVGT  305 (368)
Q Consensus       276 ADIVIsAvG~-p~----~I~--~e~ik~gavVI-Dvg~  305 (368)
                      ||+||.++.. +.    ++.  .+.++++++++ +.+.
T Consensus        84 aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~  121 (295)
T PLN02545         84 ADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSS  121 (295)
T ss_pred             CCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence            9999999873 22    111  13567787775 5554

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=95.68  E-value=0.026  Score=53.50  Aligned_cols=52  Identities=21%  Similarity=0.301  Sum_probs=43.5

Q ss_pred             ccCCHHHHHHHH----HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeC
Q 017679          212 IPCTPKGCIELL----IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA  264 (368)
Q Consensus       212 ~PcTa~gv~~lL----~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~  264 (368)
                      .|.|.+|+...+    ++.+.+++|++|+|.|.|+ ||+.++.+|.+.|++|+ ++.+
T Consensus         7 ~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~-VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076           7 EEATGRGVAYATREALKKLGIGLAGARVAIQGFGN-VGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CccchHHHHHHHHHHHHhcCCCccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence            477888876664    4567789999999999987 59999999999999987 7765

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.67  E-value=0.038  Score=54.97  Aligned_cols=93  Identities=14%  Similarity=0.165  Sum_probs=62.4

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------Hhh
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQ  271 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~~  271 (368)
                      +|....++..+...+..-.|++|+|.|.|. ||..+++++...|++|+++......                     +.+
T Consensus       165 ~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~  243 (360)
T PLN02586        165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA  243 (360)
T ss_pred             hcchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh
Confidence            444455555555555445799999999865 5999999999999987765433211                     112


Q ss_pred             hccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          272 ITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      .+..+|+||.++|.+..+  .-+.+++|..++.+|..
T Consensus       244 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~  280 (360)
T PLN02586        244 AIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP  280 (360)
T ss_pred             hcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence            223479999998876533  23567888888888864

>PRK09414 glutamate dehydrogenase; Provisional

Probab=95.66  E-value=0.13  Score=53.72  Aligned_cols=51  Identities=27%  Similarity=0.223  Sum_probs=42.9

Q ss_pred             cccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEE
Q 017679          211 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV  262 (368)
Q Consensus       211 ~~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~  262 (368)
                      -.+.|.+|+...    +++.+.+++|++|+|.|.|+ ||+.+|.+|.+.|++|+.+
T Consensus       207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGn-VG~~~A~~L~~~GakVVav  261 (445)
T PRK09414        207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGN-VAIYAIEKAQQLGAKVVTC  261 (445)
T ss_pred             CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence            346888886655    45668899999999999988 5999999999999998766

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.65  E-value=0.034  Score=57.40  Aligned_cols=35  Identities=23%  Similarity=0.272  Sum_probs=32.3

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +.||+|+|+|.|.. |+++|.+|.++|++|+++...
T Consensus        12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~   46 (458)
T PRK01710         12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKK   46 (458)
T ss_pred             hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCC
Confidence            56899999999998 999999999999999999865

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.62  E-value=0.027  Score=52.47  Aligned_cols=38  Identities=29%  Similarity=0.317  Sum_probs=34.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~   42 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS   42 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999998889999999999999999888764

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.61  E-value=0.022  Score=53.07  Aligned_cols=69  Identities=20%  Similarity=0.250  Sum_probs=49.4

Q ss_pred             eEEEEc-cCccchHHHHHHHhhCCCEEEEEeCCCC-------------------------CHhhhccCCCEEEEecCCCC
Q 017679          234 NAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------NPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       234 ~VvVIG-~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------------~L~~~~~~ADIVIsAvG~p~  287 (368)
                      ++.||| .|. +|..++..|.+.|.+|++..++..                         +..+.++++|+||.++....
T Consensus         2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~   80 (219)
T TIGR01915         2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDH   80 (219)
T ss_pred             EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHH
Confidence            689998 565 599999999999999998876431                         23355788999999998543


Q ss_pred             c---cc--CCCcCCCcEEEEee
Q 017679          288 L---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       288 ~---I~--~e~ik~gavVIDvg  304 (368)
                      +   +.  ...+. +.+|||+.
T Consensus        81 ~~~~l~~l~~~l~-~~vvI~~~  101 (219)
T TIGR01915        81 VLKTLESLRDELS-GKLVISPV  101 (219)
T ss_pred             HHHHHHHHHHhcc-CCEEEEec
Confidence            3   11  12233 57899983

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.017  Score=54.06  Aligned_cols=38  Identities=18%  Similarity=0.211  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++|++++|.|+++-+|+.++..|+++|++|+++.+..
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~   39 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA   39 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence            46899999999988899999999999999999987653

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=95.59  E-value=0.029  Score=54.32  Aligned_cols=53  Identities=19%  Similarity=0.174  Sum_probs=44.0

Q ss_pred             cccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeC
Q 017679          211 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA  264 (368)
Q Consensus       211 ~~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~  264 (368)
                      --+.|.+|++..    +++.+.+++|++|+|-|.|++ |+.++.+|.+.|++|+ |+.+
T Consensus        13 R~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGnV-G~~~a~~L~e~GakvvaVsD~   70 (254)
T cd05313          13 RPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGNV-AQYAAEKLLELGAKVVTLSDS   70 (254)
T ss_pred             CCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECC
Confidence            347788886655    456788999999999999885 9999999999999877 6653

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.58  E-value=0.027  Score=51.54  Aligned_cols=57  Identities=26%  Similarity=0.353  Sum_probs=44.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------CH----h---hhccCCCEEEEecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NP----E---QITSEADIVIAAAGV  285 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------~L----~---~~~~~ADIVIsAvG~  285 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++..            |+    .   +.....|+||..+|.
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~   77 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI   77 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence            478999999999998999999999999999998876531            11    1   123457899987774

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.024  Score=53.61  Aligned_cols=57  Identities=18%  Similarity=0.229  Sum_probs=44.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-C---------------------CHhhhccCCCEEEEecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K---------------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~---------------------~L~~~~~~ADIVIsAvG~  285 (368)
                      .++||+++|.|+|+-+|+.++..|+++|++|+++.++. .                     ++.+...+.|++|+.+|.
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            46899999999988889999999999999998876543 1                     122344567888877764

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=95.54  E-value=0.036  Score=57.75  Aligned_cols=126  Identities=21%  Similarity=0.219  Sum_probs=73.3

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH--hhhccCCCEEEEecCCCCcccCCCcCC-CcEEEEeecC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--EQITSEADIVIAAAGVANLVRGSWLKP-GAVVLDVGTC  306 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L--~~~~~~ADIVIsAvG~p~~I~~e~ik~-gavVIDvg~n  306 (368)
                      +.||+|+|+|-|.. |++++..|.++|+.|+++..+....  ...-...+-|=...|. +..  ++... ..+|.-=|++
T Consensus         5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~-~~~--~~~~~~d~vV~SPGi~   80 (448)
T COG0771           5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGS-HDD--EDLAEFDLVVKSPGIP   80 (448)
T ss_pred             ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCc-cch--hccccCCEEEECCCCC
Confidence            45999999999998 9999999999999999998654331  0110011111111221 111  23322 4555555555


Q ss_pred             CCCCCCCCCCCCCcEEEcccchhhh---hccceEeccCCCcccHHHHHHHHHHHHHHHH
Q 017679          307 PVDVSVDPSCEYGYRLMGDVCYEEA---MRLASVITPVPGGVGPMTVAMLLSNTLDSAK  362 (368)
Q Consensus       307 ~~~~~~d~t~~~~~kl~GDVd~~~~---~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~  362 (368)
                      +....+..-...+-++.||++.---   ....-+||   |==|.-|++.|+.++++++-
T Consensus        81 ~~~p~v~~A~~~gi~i~~dieL~~r~~~~~p~vaIT---GTNGKTTTTsli~~~l~~~G  136 (448)
T COG0771          81 PTHPLVEAAKAAGIEIIGDIELFYRLSGEAPIVAIT---GTNGKTTTTSLIAHLLKAAG  136 (448)
T ss_pred             CCCHHHHHHHHcCCcEEeHHHHHHHhcCCCCEEEEE---CCCchHHHHHHHHHHHHhcC
Confidence            5321000001124578999984221   11233344   55679999999999998864

>PLN02712 arogenate dehydrogenase

Probab=95.52  E-value=0.022  Score=62.02  Aligned_cols=76  Identities=17%  Similarity=0.230  Sum_probs=56.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhc-cCCCEEEEecCCCC---ccc--
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQIT-SEADIVIAAAGVAN---LVR--  290 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~-~~ADIVIsAvG~p~---~I~--  290 (368)
                      -+.+++.|||.|.+ |..++..|.+.|.+|+++.+..             .++.+.+ .+||+||.++....   ++.  
T Consensus        50 ~~~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l  128 (667)
T PLN02712         50 TTQLKIAIIGFGNY-GQFLAKTLISQGHTVLAHSRSDHSLAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSL  128 (667)
T ss_pred             CCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhh
Confidence            34578999999876 9999999999999999887652             1333434 46999999998422   222  


Q ss_pred             -CCCcCCCcEEEEeecC
Q 017679          291 -GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 -~e~ik~gavVIDvg~n  306 (368)
                       ...+++|++|+|++.-
T Consensus       129 ~~~~l~~g~iVvDv~Sv  145 (667)
T PLN02712        129 PLQRLKRNTLFVDVLSV  145 (667)
T ss_pred             hhhcCCCCeEEEECCCC
Confidence             2457889999999853

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.49  E-value=0.052  Score=53.98  Aligned_cols=135  Identities=22%  Similarity=0.310  Sum_probs=87.1

Q ss_pred             HHHHHHHHH----------hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------
Q 017679          217 KGCIELLIR----------SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------  266 (368)
Q Consensus       217 ~gv~~lL~~----------~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------  266 (368)
                      .+++..+..          .+....+.+++++|.|-+ |..++..-...|+-||-..-+.                    
T Consensus       139 ~aVi~Aa~a~~rffpm~~TAagtv~pA~vlv~G~Gva-gl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee  217 (356)
T COG3288         139 IAVIGAALAYGRFFPMQITAAGTVSPAKVLVIGAGVA-GLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEE  217 (356)
T ss_pred             HHHHHHHHHhhhcccchhhhcccccchhhhhhhHHHH-HHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccc
Confidence            567777666          346778899999999865 8777766666777666543110                    


Q ss_pred             ------------------CCHhhhccCCCEEEEec---CC--CCcccCCCc---CCCcEEEEeecCCCCCCCCCCCC--C
Q 017679          267 ------------------KNPEQITSEADIVIAAA---GV--ANLVRGSWL---KPGAVVLDVGTCPVDVSVDPSCE--Y  318 (368)
Q Consensus       267 ------------------~~L~~~~~~ADIVIsAv---G~--p~~I~~e~i---k~gavVIDvg~n~~~~~~d~t~~--~  318 (368)
                                        .-+.++.++.||||+..   |+  |.+|+.+|+   |||.+|+|+....--     .|+  .
T Consensus       218 ~~gGYAk~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GG-----Nce~t~  292 (356)
T COG3288         218 SAGGYAKEMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGG-----NCELTE  292 (356)
T ss_pred             cCCCccccCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCC-----Cccccc
Confidence                              01457899999999877   43  557999886   899999999865421     111  0


Q ss_pred             CcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHH
Q 017679          319 GYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK  362 (368)
Q Consensus       319 ~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~  362 (368)
                      -++++   ....+ ...| .|-+||-+-.-...+.-+|++...+
T Consensus       293 pg~~v---~~~gV-~iig-~~nlp~r~a~~aS~LYa~Nl~~~l~  331 (356)
T COG3288         293 PGKVV---TKNGV-KIIG-YTNLPGRLAAQASQLYATNLVNLLK  331 (356)
T ss_pred             CCeEE---EeCCe-EEEe-ecCcchhhhhhHHHHHHHHHHHHHH
Confidence            11222   11112 3445 3577887766666677777766554

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.45  E-value=0.027  Score=59.32  Aligned_cols=73  Identities=19%  Similarity=0.295  Sum_probs=56.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhcc---CCCEEEEecCCCCcc
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITS---EADIVIAAAGVANLV  289 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~---~ADIVIsAvG~p~~I  289 (368)
                      +|-+||-|.. |.++|..|+++|.+|++++|+..                     ++++.++   ++|+||+.+..+..+
T Consensus         8 ~IG~IGLG~M-G~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV   86 (493)
T PLN02350          8 RIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV   86 (493)
T ss_pred             CEEEEeeHHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence            6899999986 99999999999999999998631                     2223444   499999998765532


Q ss_pred             c------CCCcCCCcEEEEeecCC
Q 017679          290 R------GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       290 ~------~e~ik~gavVIDvg~n~  307 (368)
                      .      ...+++|.+|||.|...
T Consensus        87 ~~Vi~gl~~~l~~G~iiID~sT~~  110 (493)
T PLN02350         87 DQTIKALSEYMEPGDCIIDGGNEW  110 (493)
T ss_pred             HHHHHHHHhhcCCCCEEEECCCCC
Confidence            1      23468899999999764

>PLN02858 fructose-bisphosphate aldolase

Probab=95.44  E-value=0.021  Score=66.88  Aligned_cols=76  Identities=18%  Similarity=0.189  Sum_probs=61.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCcc-----cC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANLV-----RG  291 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I-----~~  291 (368)
                      ++++|-+||-|.+ |.++|..|++.|.+|++.+++.              .+..+..++||+||+.+..+.-+     ..
T Consensus         3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~   81 (1378)
T PLN02858          3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGD   81 (1378)
T ss_pred             CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhch
Confidence            4678999999987 9999999999999999998863              35668888999999999865422     11


Q ss_pred             ----CCcCCCcEEEEeecCC
Q 017679          292 ----SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       292 ----e~ik~gavVIDvg~n~  307 (368)
                          +.+++|.++||+++..
T Consensus        82 ~g~~~~l~~g~iivd~STi~  101 (1378)
T PLN02858         82 EGAAKGLQKGAVILIRSTIL  101 (1378)
T ss_pred             hhHHhcCCCcCEEEECCCCC
Confidence                2357899999999754

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.42  E-value=0.033  Score=53.95  Aligned_cols=73  Identities=19%  Similarity=0.202  Sum_probs=53.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC---------------------------------------CCCHhhhc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------------------------------------TKNPEQIT  273 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~---------------------------------------t~~L~~~~  273 (368)
                      ++|.|||.|.. |..+|..|++.|.+|+++.+.                                       +.++++.+
T Consensus         4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~   82 (287)
T PRK08293          4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV   82 (287)
T ss_pred             cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence            58999998765 999999999999999999653                                       23455678


Q ss_pred             cCCCEEEEecCCCC-----ccc--CCCcCCCcEEEEeecC
Q 017679          274 SEADIVIAAAGVAN-----LVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       274 ~~ADIVIsAvG~p~-----~I~--~e~ik~gavVIDvg~n  306 (368)
                      ++||+||.|+...-     ++.  .+.+++++++.+....
T Consensus        83 ~~aDlVieavpe~~~~k~~~~~~l~~~~~~~~ii~sntSt  122 (287)
T PRK08293         83 KDADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSST  122 (287)
T ss_pred             cCCCEEEEeccCCHHHHHHHHHHHHhhCCCCCEEEECccc
Confidence            99999999997431     111  1345778877665443

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.37  E-value=0.04  Score=54.60  Aligned_cols=55  Identities=20%  Similarity=0.299  Sum_probs=43.4

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCCC-----------------------CHhhhccCCCEEEEecCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK-----------------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t~-----------------------~L~~~~~~ADIVIsAvG~  285 (368)
                      .|+||.|||+|. ||..++..|+..|.  ++.+++.+..                       +-.+.+++|||||.+.|.
T Consensus         5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~   83 (315)
T PRK00066          5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA   83 (315)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence            578999999976 59999999998885  6888875321                       123568999999999997


Q ss_pred             C
Q 017679          286 A  286 (368)
Q Consensus       286 p  286 (368)
                      |
T Consensus        84 ~   84 (315)
T PRK00066         84 P   84 (315)
T ss_pred             C
Confidence            5

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.34  E-value=0.047  Score=54.12  Aligned_cols=56  Identities=25%  Similarity=0.454  Sum_probs=44.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC--------------------------CCHhhhccCCCEEEEe
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT--------------------------KNPEQITSEADIVIAA  282 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t--------------------------~~L~~~~~~ADIVIsA  282 (368)
                      .+.+||+|||+|. ||..++.+|+..| +++.++..+.                          .+++ .+++||+||.+
T Consensus         3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit   80 (319)
T PTZ00117          3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT   80 (319)
T ss_pred             CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence            4678999999866 5999999999888 6888876431                          2444 77999999999


Q ss_pred             cCCCC
Q 017679          283 AGVAN  287 (368)
Q Consensus       283 vG~p~  287 (368)
                      +|.|.
T Consensus        81 ag~~~   85 (319)
T PTZ00117         81 AGVQR   85 (319)
T ss_pred             CCCCC
Confidence            97643

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.32  E-value=0.021  Score=58.29  Aligned_cols=76  Identities=18%  Similarity=0.223  Sum_probs=55.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCC---------------------CHh-hhccCCCEEEEecCCC-
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK---------------------NPE-QITSEADIVIAAAGVA-  286 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~---------------------~L~-~~~~~ADIVIsAvG~p-  286 (368)
                      ..++|.|+|++|.+|+-+..+|.++ +.+|+.+.+...                     ++. +.++++|+||.|+|.- 
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~  116 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT  116 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence            5579999999999999999999998 678887765310                     011 1247799999999752 


Q ss_pred             --CcccCCCcCCCcEEEEeecCCC
Q 017679          287 --NLVRGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       287 --~~I~~e~ik~gavVIDvg~n~~  308 (368)
                        ++++. + +.|..|||++....
T Consensus       117 s~~i~~~-~-~~g~~VIDlSs~fR  138 (381)
T PLN02968        117 TQEIIKA-L-PKDLKIVDLSADFR  138 (381)
T ss_pred             HHHHHHH-H-hCCCEEEEcCchhc
Confidence              23333 3 67899999997653

>PRK12828 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.023  Score=51.59  Aligned_cols=38  Identities=21%  Similarity=0.251  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .++||+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~   41 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGA   41 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh
Confidence            46799999999999999999999999999999998754

>PRK07680 late competence protein ComER; Validated

Probab=95.29  E-value=0.03  Score=53.74  Aligned_cols=70  Identities=16%  Similarity=0.239  Sum_probs=51.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCC----CEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc----c
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL----V  289 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~----I  289 (368)
                      ++.|||.|.+ |..++..|.+.|    .+|++++++.                .+..+.+.++|+||.++. |..    +
T Consensus         2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~-p~~~~~vl   79 (273)
T PRK07680          2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVK-PLDIYPLL   79 (273)
T ss_pred             EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecC-HHHHHHHH
Confidence            5899998876 999999999888    3789888752                234456789999999984 332    2


Q ss_pred             c--CCCcCCCcEEEEeec
Q 017679          290 R--GSWLKPGAVVLDVGT  305 (368)
Q Consensus       290 ~--~e~ik~gavVIDvg~  305 (368)
                      .  ...++++.+||++.-
T Consensus        80 ~~l~~~l~~~~~iis~~a   97 (273)
T PRK07680         80 QKLAPHLTDEHCLVSITS   97 (273)
T ss_pred             HHHHhhcCCCCEEEEECC
Confidence            1  135667889999873

>PRK06199 ornithine cyclodeaminase; Validated

Probab=95.28  E-value=0.037  Score=56.35  Aligned_cols=76  Identities=22%  Similarity=0.316  Sum_probs=56.4

Q ss_pred             ccceEEEEccCccchHHHHHHHhh-C-C-CEEEEEeCCC-----------------------CCHhhhccCCCEEEEecC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR-H-H-ATVSIVHALT-----------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~-~-g-AtVti~h~~t-----------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      .-+++.|||.|.- ++.-+..+.. + + .+|.+.+++.                       .+.++.+++|||||++|+
T Consensus       154 da~~l~iiG~G~Q-A~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~  232 (379)
T PRK06199        154 DSKVVGLLGPGVM-GKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNS  232 (379)
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccC
Confidence            4578899998876 8877777665 3 2 4788887652                       245677899999999997


Q ss_pred             CC-------CcccCCCcCCCcEEEEeecCC
Q 017679          285 VA-------NLVRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       285 ~p-------~~I~~e~ik~gavVIDvg~n~  307 (368)
                      ..       -++..+|++||+.|+=+|...
T Consensus       233 s~~~~~s~~Pv~~~~~lkpG~hv~~ig~~e  262 (379)
T PRK06199        233 GETGDPSTYPYVKREWVKPGAFLLMPAACR  262 (379)
T ss_pred             CCCCCCCcCcEecHHHcCCCcEEecCCccc
Confidence            42       257899999999888777643

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.28  E-value=0.044  Score=51.66  Aligned_cols=49  Identities=16%  Similarity=0.148  Sum_probs=39.5

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT  266 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t  266 (368)
                      .++.+.+++.+.+++|++|+|.|.|+ ||+.++.+|.++|+ .|.++.++.
T Consensus         8 ~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211           8 VAMKAAMKHLGDSLEGLTVAVQGLGN-VGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             HHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEcCCC
Confidence            34455567778899999999999988 59999999999987 566676543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed

Probab=95.27  E-value=1  Score=45.34  Aligned_cols=191  Identities=14%  Similarity=0.116  Sum_probs=111.3

Q ss_pred             eeecHHHHHHHHHHHHHHHHHHHHcCC---CCC-EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC-------
Q 017679           76 VIDGKSIAEEIRSGIDKEVRRMKKSIG---KVP-GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG-------  144 (368)
Q Consensus        76 ildGk~ia~~i~~~i~~~v~~l~~~~g---~~P-~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~-------  144 (368)
                      +|+-+.+.++=.+.|-+...+++....   .+- .++.+..  .|.-.+- -.=..++.++|-++.++.-...       
T Consensus         6 ll~i~dl~~~ei~~ll~~A~~~k~~~~~~~L~gk~l~~lF~--epSTRTR-~SFe~A~~~LGg~~i~l~~~~ss~~~e~~   82 (335)
T PRK04523          6 FLNTQDWSRAELDALLTQAAAFKRNKLGSALKGKSIALVFF--NPSLRTR-TSFELGAFQLGGHAVVLQPGKDAWPIEFE   82 (335)
T ss_pred             cCchhhCCHHHHHHHHHHHHHHHhcccCccCCCCEEEEEEc--CCCchhH-HHHHHHHHHcCCeEEEeCcccccchhhcc
Confidence            455555555444455555555553211   111 3344332  3333333 3557789999999877743321       


Q ss_pred             -------CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCC-----HHHHHhcCCcccccCccCcceeeeccccCCcCccc
Q 017679          145 -------CTEDEVLNALSNYNQDSSINGILVQLPLPQHLD-----EGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFI  212 (368)
Q Consensus       145 -------~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id-----~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~  212 (368)
                             ...|.+.+.++-|+.-  +|+|.+-.|-.. .+     ....++.+...-   .+-.+|.     +  .. +.
T Consensus        83 ~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~g-~~~~~~~~~~~~~~~a~~s---~vPVINa-----~--~~-~H  148 (335)
T PRK04523         83 LGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPKF-VDWSKDRQDQVLNSFAKYS---TVPVINM-----E--TI-TH  148 (335)
T ss_pred             cccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCccc-cccccchhHHHHHHHHHhC---CCCEEEC-----C--CC-CC
Confidence                   0125567777777764  789998865321 11     112223332221   2344564     2  23 67


Q ss_pred             cCCHHHHHHHHHHhCCCC-ccceEEEEccC------ccchHHHHHHHhhCCCEEEEEeC-C-------------------
Q 017679          213 PCTPKGCIELLIRSGVEI-MGKNAVVIGRS------NIVGLPTSLLLQRHHATVSIVHA-L-------------------  265 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l-~GK~VvVIG~g------~~VGrpla~lL~~~gAtVti~h~-~-------------------  265 (368)
                      ||=+.+=+--++++...+ +|++++|++.|      ..|.+.++.+|...|++|++++- .                   
T Consensus       149 PtQaLaDl~Ti~e~~g~~~~g~ki~i~~~gd~~~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~  228 (335)
T PRK04523        149 PCQELAHALALQEHFGTTLRGKKYVLTWTYHPKPLNTAVANSALLIATRLGMDVTLLCPTPDYILDERYMDWAEQNAAES  228 (335)
T ss_pred             hHHHHHHHHHHHHHhCCccCCCEEEEEEeccCcccccHHHHHHHHHHHHcCCEEEEECCchhhCCCHHHHHHHHHHHHHc
Confidence            998888444444444468 89999887543      24688888999999999999976 2                   


Q ss_pred             ------CCCHhhhccCCCEEEEec
Q 017679          266 ------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       266 ------t~~L~~~~~~ADIVIsAv  283 (368)
                            +.++.+.+++||+|.+-.
T Consensus       229 g~~~~~~~d~~ea~~~aDvvy~~~  252 (335)
T PRK04523        229 GGSLTVSHDIDSAYAGADVVYAKS  252 (335)
T ss_pred             CCeEEEEcCHHHHhCCCCEEEece
Confidence                  245668899999998643

>PLN02477 glutamate dehydrogenase

Probab=95.26  E-value=0.038  Score=56.92  Aligned_cols=53  Identities=23%  Similarity=0.318  Sum_probs=44.0

Q ss_pred             ccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeCC
Q 017679          212 IPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHAL  265 (368)
Q Consensus       212 ~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~~  265 (368)
                      .+.|.+|+...    +++++.+++|++|+|.|.|+ ||+.++.+|.++|++|+ |+.++
T Consensus       182 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGn-VG~~~A~~L~e~GakVVaVsD~~  239 (410)
T PLN02477        182 EAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGN-VGSWAAQLIHEKGGKIVAVSDIT  239 (410)
T ss_pred             CccchHHHHHHHHHHHHHcCCCccCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECCC
Confidence            36788886554    55678899999999999987 59999999999999877 76654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.26  E-value=0.017  Score=53.66  Aligned_cols=38  Identities=24%  Similarity=0.270  Sum_probs=34.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.+..++.
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~   44 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP   44 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            57899999999988899999999999999999887753

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.019  Score=53.53  Aligned_cols=39  Identities=15%  Similarity=0.193  Sum_probs=35.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      +++||.++|.|+|.-+|+.++..|+++|++|.+++|+..
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~   40 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQS   40 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            478999999999998999999999999999999887653

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.23  E-value=0.02  Score=57.08  Aligned_cols=76  Identities=22%  Similarity=0.246  Sum_probs=52.2

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC---------------CCHh-hhccCCCEEEEecCCCC--ccc
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNPE-QITSEADIVIAAAGVAN--LVR  290 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t---------------~~L~-~~~~~ADIVIsAvG~p~--~I~  290 (368)
                      +++|.|+|++|.+|+-+..+|.+++.   ++....+..               .++. ..+..+|+||.|+|.-.  -+-
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~   80 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA   80 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH
Confidence            46899999999999999999999764   445554331               0111 22468999999997421  122


Q ss_pred             CCCcCCCcEEEEeecCC
Q 017679          291 GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       291 ~e~ik~gavVIDvg~n~  307 (368)
                      +..++.|++|||.+..+
T Consensus        81 ~~~~~~G~~VIDlS~~~   97 (334)
T PRK14874         81 PKAAAAGAVVIDNSSAF   97 (334)
T ss_pred             HHHHhCCCEEEECCchh
Confidence            23456789999998654

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.23  E-value=0.094  Score=56.67  Aligned_cols=34  Identities=24%  Similarity=0.323  Sum_probs=30.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .||+|+|||+|-+ |...|..|.++|++|+++.+.
T Consensus       309 ~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~~  342 (639)
T PRK12809        309 RSEKVAVIGAGPA-GLGCADILARAGVQVDVFDRH  342 (639)
T ss_pred             CCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeCC
Confidence            5999999999877 999999999999999999654

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=95.23  E-value=0.037  Score=57.95  Aligned_cols=73  Identities=16%  Similarity=0.245  Sum_probs=54.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhhcc---CCCEEEEecCCCCc-
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITS---EADIVIAAAGVANL-  288 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~~~---~ADIVIsAvG~p~~-  288 (368)
                      .++.|||.|.. |.++|..|+++|.+|++.+++..                    ++++.+.   ++|+||..+..+.. 
T Consensus         2 ~~IgvIGLG~M-G~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v   80 (470)
T PTZ00142          2 SDIGLIGLAVM-GQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAV   80 (470)
T ss_pred             CEEEEEeEhHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHH
Confidence            36899999986 99999999999999999987531                    3344444   48988877654432 


Q ss_pred             ---cc--CCCcCCCcEEEEeecC
Q 017679          289 ---VR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 ---I~--~e~ik~gavVIDvg~n  306 (368)
                         +.  ...+++|.+|||.|..
T Consensus        81 ~~vi~~l~~~L~~g~iIID~gn~  103 (470)
T PTZ00142         81 DETIDNLLPLLEKGDIIIDGGNE  103 (470)
T ss_pred             HHHHHHHHhhCCCCCEEEECCCC
Confidence               21  2357889999999965

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=95.22  E-value=0.062  Score=53.89  Aligned_cols=76  Identities=20%  Similarity=0.341  Sum_probs=58.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhC-C-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~-g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .-+.+.|||+|.- ++--++.+... + -+|.|..++.                     .+.++.++.|||||++|....
T Consensus       129 da~~laiIGaG~q-A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~  207 (330)
T COG2423         129 DASTLAIIGAGAQ-ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTE  207 (330)
T ss_pred             CCcEEEEECCcHH-HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCC
Confidence            3567899998865 87776666543 3 3788877652                     367788999999999998655


Q ss_pred             -cccCCCcCCCcEEEEeecCC
Q 017679          288 -LVRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 -~I~~e~ik~gavVIDvg~n~  307 (368)
                       +++.+|++||+.|.=+|.+.
T Consensus       208 Pil~~~~l~~G~hI~aiGad~  228 (330)
T COG2423         208 PVLKAEWLKPGTHINAIGADA  228 (330)
T ss_pred             CeecHhhcCCCcEEEecCCCC
Confidence             58999999999999999653

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.033  Score=53.86  Aligned_cols=40  Identities=28%  Similarity=0.335  Sum_probs=35.3

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ...++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~   74 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE   74 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            4567899999999988889999999999999999987753

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.18  E-value=0.027  Score=54.58  Aligned_cols=70  Identities=21%  Similarity=0.231  Sum_probs=51.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------------------------CHhhhcc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------------------NPEQITS  274 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------------------------~L~~~~~  274 (368)
                      ++|.|||.|.. |.++|..|++.|.+|++.+++..                                      ++ +.++
T Consensus         5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~   82 (292)
T PRK07530          5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-EDLA   82 (292)
T ss_pred             CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HHhc
Confidence            68999999876 99999999999999999976421                                      22 3467


Q ss_pred             CCCEEEEecCCCCc-----cc--CCCcCCCcEEE-Eee
Q 017679          275 EADIVIAAAGVANL-----VR--GSWLKPGAVVL-DVG  304 (368)
Q Consensus       275 ~ADIVIsAvG~p~~-----I~--~e~ik~gavVI-Dvg  304 (368)
                      +||+||.+++....     +.  ...++++++++ +.+
T Consensus        83 ~aD~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~s~ts  120 (292)
T PRK07530         83 DCDLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTS  120 (292)
T ss_pred             CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence            89999999974321     21  13467788776 444

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.16  E-value=0.019  Score=53.14  Aligned_cols=36  Identities=25%  Similarity=0.491  Sum_probs=31.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      .|++++|+|||.|++ |..++..|...|. ++++++..
T Consensus        18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecCC
Confidence            478999999999986 9999999999996 89988643

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.13  E-value=0.021  Score=53.04  Aligned_cols=39  Identities=21%  Similarity=0.225  Sum_probs=35.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~   45 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA   45 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH
Confidence            458999999999999999999999999999999998764

>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.13  E-value=0.045  Score=56.81  Aligned_cols=123  Identities=17%  Similarity=0.138  Sum_probs=68.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCc-CCCcEEEEeecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWL-KPGAVVLDVGTCPVD  309 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~i-k~gavVIDvg~n~~~  309 (368)
                      .||+|+|+|.|.. |++++.+|. +|++|++...+.....+.-..-+..+  .|. +  +.+.+ ..+.+|+--|+++..
T Consensus         5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~d~vV~SPgI~~~~   77 (454)
T PRK01368          5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNA--IAA-L--SDSRWQNLDKIVLSPGIPLTH   77 (454)
T ss_pred             CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCce--ecc-C--ChhHhhCCCEEEECCCCCCCC
Confidence            5899999999998 999999999 49999999855432221100001111  111 0  00111 123455555555421


Q ss_pred             CCCCCCCCCCcEEEcccchhh-hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          310 VSVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       310 ~~~d~t~~~~~kl~GDVd~~~-~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      .....-.+.+-++++++++-. ..+.. .+--|-|--|.-|+.-|+.++++.+
T Consensus        78 p~~~~a~~~gi~v~~e~el~~~~~~~~-~~IaVTGTnGKTTTt~ll~~iL~~~  129 (454)
T PRK01368         78 EIVKIAKNFNIPITSDIDLLFEKSKNL-KFIAITGTNGKSTTTALISHILNSN  129 (454)
T ss_pred             HHHHHHHHCCCceecHHHHHHHHhcCC-CEEEEECCCcHHHHHHHHHHHHHhc
Confidence            000000011346888888732 21111 1224568889999999999998764

>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.09  E-value=0.052  Score=56.42  Aligned_cols=126  Identities=17%  Similarity=0.204  Sum_probs=74.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CHhh--hccCCCEEEEecCCCCcccCCCc-CCCcEEEEeec
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQ--ITSEADIVIAAAGVANLVRGSWL-KPGAVVLDVGT  305 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~~--~~~~ADIVIsAvG~p~~I~~e~i-k~gavVIDvg~  305 (368)
                      ++||+|+|+|.|.. |++++.+|.++|+.|++...+.. +..+  .+++ +++....+.+    .+.+ ..+.+|+--|+
T Consensus         6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~----~~~~~~~d~vV~SpgI   79 (468)
T PRK04690          6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALAD-AALLVETEAS----AQRLAAFDVVVKSPGI   79 (468)
T ss_pred             cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhh-cCEEEeCCCC----hHHccCCCEEEECCCC
Confidence            46999999999988 99999999999999999875432 2221  2333 3322222211    1122 12456666666


Q ss_pred             CCCCCCCCCCCCCCcEEEcccch--hhhhc-c--ceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          306 CPVDVSVDPSCEYGYRLMGDVCY--EEAMR-L--ASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       306 n~~~~~~d~t~~~~~kl~GDVd~--~~~~~-~--a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      ++.......-.+.+-++++++++  ....+ .  ...+--|-|-.|.-|+.-|+.++++.+
T Consensus        80 ~~~~p~~~~a~~~~i~i~~~~el~~~~~~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~  140 (468)
T PRK04690         80 SPYRPEALAAAARGTPFIGGTALWFAEHAARDGVVPGTVCVTGTKGKSTTTALLAHLLRAA  140 (468)
T ss_pred             CCCCHHHHHHHHcCCcEEEHHHHHHHHHhhccCCCCCEEEEeCCCCHHHHHHHHHHHHHhc
Confidence            65320000000123368888886  22111 0  011225668899999999999998764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.08  E-value=0.042  Score=56.48  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=35.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~  212 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS  212 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            467899999999999999999999999999999887654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.05  E-value=0.025  Score=51.93  Aligned_cols=38  Identities=24%  Similarity=0.245  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++++|+++|+|+++-+|+.++..|+++|++|++..|+.
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~   39 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE   39 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            36899999999999999999999999999999998764

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.03  E-value=0.042  Score=53.53  Aligned_cols=53  Identities=25%  Similarity=0.359  Sum_probs=43.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------------------CCHhhhccCCCEE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------KNPEQITSEADIV  279 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------------------~~L~~~~~~ADIV  279 (368)
                      ++|.|||.|.+ |.+++..|++.|.+|+++++..                                 .++.+.+++||+|
T Consensus         5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV   83 (311)
T PRK06130          5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV   83 (311)
T ss_pred             cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence            68999999875 9999999999999999997532                                 2344567899999


Q ss_pred             EEecCCC
Q 017679          280 IAAAGVA  286 (368)
Q Consensus       280 IsAvG~p  286 (368)
                      |.++...
T Consensus        84 i~av~~~   90 (311)
T PRK06130         84 IEAVPEK   90 (311)
T ss_pred             EEeccCc
Confidence            9998743

>PRK06444 prephenate dehydrogenase; Provisional

Probab=95.02  E-value=0.024  Score=52.73  Aligned_cols=59  Identities=12%  Similarity=0.241  Sum_probs=43.8

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCC-CcEEEEeecC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKP-GAVVLDVGTC  306 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~-gavVIDvg~n  306 (368)
                      +++|||..|-+|+-++..|.+.|..|+            +++||+||.|++....  .+++++ ..+|+|+|.-
T Consensus         2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~------------~~~~DlVilavPv~~~--~~~i~~~~~~v~Dv~Sv   61 (197)
T PRK06444          2 MEIIIGKNGRLGRVLCSILDDNGLGVY------------IKKADHAFLSVPIDAA--LNYIESYDNNFVEISSV   61 (197)
T ss_pred             EEEEEecCCcHHHHHHHHHHhCCCEEE------------ECCCCEEEEeCCHHHH--HHHHHHhCCeEEecccc
Confidence            689999856679999999999999886            4799999999974322  112211 2378899964

>PLN02858 fructose-bisphosphate aldolase

Probab=95.02  E-value=0.034  Score=65.13  Aligned_cols=73  Identities=18%  Similarity=0.254  Sum_probs=59.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----c-cC--
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-RG--  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I-~~--  291 (368)
                      ++|.+||-|.+ |.+++..|++.|.+|++++++.              .+..+.++++|+||++++.|..    + ..  
T Consensus       325 ~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~g  403 (1378)
T PLN02858        325 KRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDLG  403 (1378)
T ss_pred             CeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchhh
Confidence            88999999986 9999999999999999998753              2456778999999999986652    2 11  


Q ss_pred             --CCcCCCcEEEEeecC
Q 017679          292 --SWLKPGAVVLDVGTC  306 (368)
Q Consensus       292 --e~ik~gavVIDvg~n  306 (368)
                        +.+++|.++||+++.
T Consensus       404 ~~~~l~~g~ivVd~STv  420 (1378)
T PLN02858        404 AVSALPAGASIVLSSTV  420 (1378)
T ss_pred             HHhcCCCCCEEEECCCC
Confidence              235789999999874

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.00  E-value=0.036  Score=52.31  Aligned_cols=52  Identities=23%  Similarity=0.342  Sum_probs=42.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------CHhhh-ccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQI-TSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------~L~~~-~~~ADIVIsAvG~  285 (368)
                      ++++|||.|.. |..+|..|.++|.+|++..++..                       -|++. +.+||++|.+||.
T Consensus         1 m~iiIiG~G~v-G~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGAGRV-GRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECCcHH-HHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            57999999985 99999999999999999976521                       14444 7889999999986

>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]

Probab=95.00  E-value=0.096  Score=51.89  Aligned_cols=139  Identities=19%  Similarity=0.210  Sum_probs=94.4

Q ss_pred             HHHHHHHHcCCeEEEEEcC-----CCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcce
Q 017679          124 NKIKACEEVGIKSIVTEFA-----DGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLN  198 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~-----~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N  198 (368)
                      .=.-++..+|-+..+..=.     ..-+-+|-...+..+     +|||++--.  +|.+.+++-++    -.   +-.+|
T Consensus        61 SFeva~~qlGg~~~~l~~~~~Qlgr~Esi~DTArVLsr~-----~D~I~~R~~--~~~~ve~lA~~----s~---VPViN  126 (310)
T COG0078          61 SFEVAATQLGGHAIYLGPGDSQLGRGESIKDTARVLSRM-----VDAIMIRGF--SHETLEELAKY----SG---VPVIN  126 (310)
T ss_pred             hHHHHHHHcCCCeEEeCCCccccCCCCcHHHHHHHHHhh-----hheEEEecc--cHHHHHHHHHh----CC---CceEc
Confidence            3456788899998766421     111234444444444     889998644  33333332221    11   22233


Q ss_pred             eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------------
Q 017679          199 IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------------  265 (368)
Q Consensus       199 ~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-------------  265 (368)
                             +.++.+.||-..|=+--++++.-.++|++++=+|-|+.|+..+....+..|..|+++.-+             
T Consensus       127 -------gLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ia~Pk~~~p~~~~~~~a~  199 (310)
T COG0078         127 -------GLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAK  199 (310)
T ss_pred             -------ccccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEEEECCCcCCcCHHHHHHHH
Confidence                   236778899999966666666556999999999999999999998888999999998532             


Q ss_pred             ------------CCCHhhhccCCCEEEEec
Q 017679          266 ------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       266 ------------t~~L~~~~~~ADIVIsAv  283 (368)
                                  |.|..+.++.||+|.+-+
T Consensus       200 ~~a~~~g~~i~~t~d~~eAv~gADvvyTDv  229 (310)
T COG0078         200 ENAKESGGKITLTEDPEEAVKGADVVYTDV  229 (310)
T ss_pred             HHHHhcCCeEEEecCHHHHhCCCCEEEecC
Confidence                        357888999999999655

>PRK12939 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.048  Score=50.07  Aligned_cols=37  Identities=30%  Similarity=0.366  Sum_probs=32.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|+++-+|+.++..|.++|++|.++.+.
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~   40 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL   40 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence            3679999999998888999999999999998888654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.94  E-value=0.058  Score=50.50  Aligned_cols=37  Identities=27%  Similarity=0.258  Sum_probs=33.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~   42 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH   42 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999998888999999999999999888654

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=94.94  E-value=0.041  Score=50.71  Aligned_cols=79  Identities=23%  Similarity=0.372  Sum_probs=49.3

Q ss_pred             CccceEEEEc----------------cCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhhc
Q 017679          230 IMGKNAVVIG----------------RSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQIT  273 (368)
Q Consensus       230 l~GK~VvVIG----------------~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~~  273 (368)
                      |+||+|+|-+                .||-.|..+|..+..+||.|+++|..+.                    .+.+.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~   80 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL   80 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence            4788888875                4455699999999999999999997641                    134667


Q ss_pred             cCCCEEEEecCCCCccc----CCCcCC---CcEEEEeecCCC
Q 017679          274 SEADIVIAAAGVANLVR----GSWLKP---GAVVLDVGTCPV  308 (368)
Q Consensus       274 ~~ADIVIsAvG~p~~I~----~e~ik~---gavVIDvg~n~~  308 (368)
                      .++|++|.|+....|-.    ..-+++   ....+.+--+|.
T Consensus        81 ~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~pk  122 (185)
T PF04127_consen   81 PSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTPK  122 (185)
T ss_dssp             GGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-GG
T ss_pred             CcceeEEEecchhheeehhccccccccccCcceEEEEEeChH
Confidence            88999998888777632    234663   357777777663

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.93  E-value=0.026  Score=52.47  Aligned_cols=38  Identities=21%  Similarity=0.278  Sum_probs=34.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~   43 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA   43 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH
Confidence            47899999999999999999999999999999988763

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=94.90  E-value=0.15  Score=53.50  Aligned_cols=156  Identities=17%  Similarity=0.098  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCC---CCCCHHHHHhcCCccc------
Q 017679          119 QTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLP---QHLDEGKILDAVSLEK------  189 (368)
Q Consensus       119 ~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp---~~id~~~il~~I~p~K------  189 (368)
                      .+|++--.+.|+++|+              ++.+.++.++.|+.| |.....|=+   .|--.......+.-.+      
T Consensus       227 Iaf~NEla~lce~~gi--------------D~~eV~~~~~~d~ri-g~~~l~PG~G~GG~ClpkD~~~L~~~a~~~g~~~  291 (473)
T PLN02353        227 ISSVNAMSALCEATGA--------------DVSQVSHAVGKDSRI-GPKFLNASVGFGGSCFQKDILNLVYICECNGLPE  291 (473)
T ss_pred             HHHHHHHHHHHHHhCC--------------CHHHHHHHhCCCCcC-CCCCCCCCCCCCCcchhhhHHHHHHHHHHcCCch


Q ss_pred             ---ccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEc----------cCccchHHHHHHHhhCC
Q 017679          190 ---DVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIG----------RSNIVGLPTSLLLQRHH  256 (368)
Q Consensus       190 ---DVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG----------~g~~VGrpla~lL~~~g  256 (368)
                         -++.+...|...-.             .-+-++.+...-++.|++|+|+|          |.-. ...++..|.++|
T Consensus       292 ~~~l~~~~~~iN~~~~~-------------~vv~~~~~~l~~~~~~~~VavlGlafK~~tdD~R~Sp-a~~li~~L~~~G  357 (473)
T PLN02353        292 VAEYWKQVIKMNDYQKS-------------RFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETP-AIDVCKGLLGDK  357 (473)
T ss_pred             HHHHHHHHHHHHHhhHH-------------HHHHHHHHHhhcccCCCEEEEEeeeecCCCCccccCh-HHHHHHHHHhCC


Q ss_pred             CEEEEEeCC------------------------------------CCCHhhhccCCCEEEEecCCCCc--cc----CCCc
Q 017679          257 ATVSIVHAL------------------------------------TKNPEQITSEADIVIAAAGVANL--VR----GSWL  294 (368)
Q Consensus       257 AtVti~h~~------------------------------------t~~L~~~~~~ADIVIsAvG~p~~--I~----~e~i  294 (368)
                      ++|.+..-.                                    ..++.+.++.||+||.+|..+.|  ++    .+.+
T Consensus       358 ~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~vvi~t~~~ef~~l~~~~~~~~m  437 (473)
T PLN02353        358 AKLSIYDPQVTEEQIQRDLSMNKFDWDHPRHLQPMSPTAVKQVSVVWDAYEATKGAHGICILTEWDEFKTLDYQKIYDNM  437 (473)
T ss_pred             CEEEEECCCCChHHHHHHhhcccccccccccccccccccccceeeeCCHHHHhcCCCEEEECCCChHhcccCHHHHHHhc


Q ss_pred             CCCcEEEEe
Q 017679          295 KPGAVVLDV  303 (368)
Q Consensus       295 k~gavVIDv  303 (368)
                      ++..+|||.
T Consensus       438 ~~~~~viD~  446 (473)
T PLN02353        438 QKPAFVFDG  446 (473)
T ss_pred             cCCCEEEEC

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=94.89  E-value=0.06  Score=52.96  Aligned_cols=70  Identities=24%  Similarity=0.344  Sum_probs=51.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------------------------CCHhhhccCCCEEEEe
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------------------KNPEQITSEADIVIAA  282 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------------------------~~L~~~~~~ADIVIsA  282 (368)
                      .+|+|||.|.+ |.++|..|++.|.+|+++.+..                              .+. +.+..+|+||.+
T Consensus         3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vil~   80 (341)
T PRK08229          3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATADLVLVT   80 (341)
T ss_pred             ceEEEECCCHH-HHHHHHHHHhcCCcEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhccCCCEEEEE
Confidence            47999999875 9999999999999999987631                              011 345789999999


Q ss_pred             cCCCCc---cc--CCCcCCCcEEEEee
Q 017679          283 AGVANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       283 vG~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      +..+..   +.  ...++++.+|+++-
T Consensus        81 vk~~~~~~~~~~l~~~~~~~~iii~~~  107 (341)
T PRK08229         81 VKSAATADAAAALAGHARPGAVVVSFQ  107 (341)
T ss_pred             ecCcchHHHHHHHHhhCCCCCEEEEeC
Confidence            976543   11  12457788898883

>PRK08339 short chain dehydrogenase; Provisional

Probab=94.87  E-value=0.026  Score=53.38  Aligned_cols=38  Identities=24%  Similarity=0.322  Sum_probs=34.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~   41 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN   41 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998888999999999999999998765

>PTZ00317 NADP-dependent malic enzyme; Provisional

Probab=94.87  E-value=0.059  Score=57.40  Aligned_cols=96  Identities=15%  Similarity=0.184  Sum_probs=76.4

Q ss_pred             ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCC-------------
Q 017679          210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHAL-------------  265 (368)
Q Consensus       210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~-------------  265 (368)
                      |---++-.|++..++-.+.+|+..++++.|+|.+ |..+|.+|..    .|.       .+++++++             
T Consensus       275 GTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsA-giGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~  353 (559)
T PTZ00317        275 GTGAVIAAGFLNALKLSGVPPEEQRIVFFGAGSA-AIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAK  353 (559)
T ss_pred             hHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccH
Confidence            3335677889999999999999999999999988 9999998874    665       68888653             


Q ss_pred             ----------------CCCHhhhccCC--CEEEEecCCCCcccCCCcC------CCcEEEEeecCC
Q 017679          266 ----------------TKNPEQITSEA--DIVIAAAGVANLVRGSWLK------PGAVVLDVGTCP  307 (368)
Q Consensus       266 ----------------t~~L~~~~~~A--DIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~  307 (368)
                                      ..+|.+.++.+  |++|-+.|.|+.+++++++      +.-+|+=++ ||
T Consensus       354 ~k~~fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft~evv~~Ma~~~~rPIIFaLS-NP  418 (559)
T PTZ00317        354 HKVPFARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFTEEVVKTMASNVERPIIFPLS-NP  418 (559)
T ss_pred             HHHHHhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CC
Confidence                            11577888888  9999999999999998875      356776666 44

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=94.87  E-value=0.03  Score=55.05  Aligned_cols=58  Identities=34%  Similarity=0.452  Sum_probs=43.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEE----------------eCCC----------CCHhhhccCCCEEEEe
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV----------------HALT----------KNPEQITSEADIVIAA  282 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~----------------h~~t----------~~L~~~~~~ADIVIsA  282 (368)
                      .-.+.||.|+|+++-+|+|++++|. ++-.|+-.                |-.|          ++|++.++.||+||-+
T Consensus        25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP  103 (345)
T KOG1494|consen   25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP  103 (345)
T ss_pred             ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence            3457799999999889999998775 44333333                3322          4689999999999999


Q ss_pred             cCCCC
Q 017679          283 AGVAN  287 (368)
Q Consensus       283 vG~p~  287 (368)
                      +|.|.
T Consensus       104 AGVPR  108 (345)
T KOG1494|consen  104 AGVPR  108 (345)
T ss_pred             CCCCC
Confidence            99765

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.87  E-value=0.12  Score=52.25  Aligned_cols=113  Identities=19%  Similarity=0.197  Sum_probs=68.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhh-CCCE---EEEEeCCC----------C-------CHhhhccCCCEEEEecCCCC--
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR-HHAT---VSIVHALT----------K-------NPEQITSEADIVIAAAGVAN--  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~-~gAt---Vti~h~~t----------~-------~L~~~~~~ADIVIsAvG~p~--  287 (368)
                      .+.+|.|||++|.||+-+..+|.+ .+..   +..+.+..          .       +. +..++.|+|+.|+|.--  
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~~-~~~~~~Divf~a~~~~~s~   82 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAKI-NSFEGVDIAFFSAGGEVSR   82 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCCH-HHhcCCCEEEECCChHHHH
Confidence            356899999999999999999995 5554   55554431          0       11 23478999999986421  


Q ss_pred             cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHH
Q 017679          288 LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLL  354 (368)
Q Consensus       288 ~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl  354 (368)
                      -+-+...+.|++|||.+....-   ++..   .-.+-.|.-+...+..+ +-..||   -.|++|++
T Consensus        83 ~~~~~~~~~G~~VID~Ss~fR~---~~~v---plvvPEvN~e~i~~~~~-iIanPn---C~tt~~~l  139 (347)
T PRK06728         83 QFVNQAVSSGAIVIDNTSEYRM---AHDV---PLVVPEVNAHTLKEHKG-IIAVPN---CSALQMVT  139 (347)
T ss_pred             HHHHHHHHCCCEEEECchhhcC---CCCC---CeEeCCcCHHHHhccCC-EEECCC---CHHHHHHH
Confidence            1222334679999999976542   1111   12344555444433224 335676   56666663

>KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism]

Probab=94.87  E-value=0.048  Score=54.90  Aligned_cols=170  Identities=19%  Similarity=0.260  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhc-CCcccccCcc-Cc
Q 017679          119 QTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDA-VSLEKDVDGF-HP  196 (368)
Q Consensus       119 ~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~-I~p~KDVDgl-~~  196 (368)
                      +.|-+.=.+..++-|++.+.+.   +.+.+|+...|      .+.|+++|.---  +++ .+++++ -.--|=|... .-
T Consensus        13 e~~~~~~~~~l~~~g~~v~~~~---~~~~eel~~~i------~~~~aviVrs~t--kvt-advl~aa~~~lkvVgrag~G   80 (406)
T KOG0068|consen   13 ESLDQACIEILKDNGYQVEFKK---NLSLEELIEKI------KDCDALIVRSKT--KVT-ADVLEAAAGGLKVVGRAGIG   80 (406)
T ss_pred             cccchHHHHHHHhcCceEEEec---cCCHHHHHHHh------ccCCEEEEEeCC--eec-HHHHHhhcCCeEEEEecccC
Confidence            3455556677888888876553   34555776666      357889987653  354 355553 2223333222 11


Q ss_pred             cee---------eeccccCCcCccccCCHHHHHHH-------H-------------------HHhCCCCccceEEEEccC
Q 017679          197 LNI---------GNLAMRGREPLFIPCTPKGCIEL-------L-------------------IRSGVEIMGKNAVVIGRS  241 (368)
Q Consensus       197 ~N~---------G~L~~g~~~~~~~PcTa~gv~~l-------L-------------------~~~~i~l~GK~VvVIG~g  241 (368)
                      +|.         |-+..+  .|.   ..+.++-|+       |                   +..|.++.||+.-|+|.|
T Consensus        81 ~dNVDL~AAte~gi~Vvn--~P~---~Ns~saAEltigli~SLaR~i~~A~~s~k~g~wnr~~~~G~el~GKTLgvlG~G  155 (406)
T KOG0068|consen   81 VDNVDLKAATENGILVVN--TPT---ANSRSAAELTIGLILSLARQIGQASASMKEGKWNRVKYLGWELRGKTLGVLGLG  155 (406)
T ss_pred             ccccChhhHHhCCeEEEe--CCC---CChHHHHHHHHHHHHHHhhhcchhheeeecCceeecceeeeEEeccEEEEeecc
Confidence            111         111111  111   123333332       1                   233678999999999999


Q ss_pred             ccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecC-CC---CcccCC---CcCCCcEEEE
Q 017679          242 NIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAG-VA---NLVRGS---WLKPGAVVLD  302 (368)
Q Consensus       242 ~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG-~p---~~I~~e---~ik~gavVID  302 (368)
                      .+ |.-+|..+...|..|...+--+            -.++|.+..||+|-.-++ .|   +++..+   .+|+|..||.
T Consensus       156 rI-GseVA~r~k~~gm~vI~~dpi~~~~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~lin~~tfA~mKkGVriIN  234 (406)
T KOG0068|consen  156 RI-GSEVAVRAKAMGMHVIGYDPITPMALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLLNDETFAKMKKGVRIIN  234 (406)
T ss_pred             cc-hHHHHHHHHhcCceEEeecCCCchHHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhccCHHHHHHhhCCcEEEE
Confidence            97 9999999999999888776544            257899999999886665 23   356554   4589999999


Q ss_pred             eecC
Q 017679          303 VGTC  306 (368)
Q Consensus       303 vg~n  306 (368)
                      ++--
T Consensus       235 ~aRG  238 (406)
T KOG0068|consen  235 VARG  238 (406)
T ss_pred             ecCC
Confidence            8754

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.86  E-value=0.023  Score=53.45  Aligned_cols=77  Identities=16%  Similarity=0.294  Sum_probs=54.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-----------------------------------------
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-----------------------------------------  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-----------------------------------------  266 (368)
                      .|++++|+|+|.|++ |..++..|.+.|. ++++++...                                         
T Consensus        18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            468899999999996 9999999999996 788874210                                         


Q ss_pred             ------CCHhhhccCCCEEEEecCCCCc---ccCCCcCCCcEEEEeecC
Q 017679          267 ------KNPEQITSEADIVIAAAGVANL---VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       267 ------~~L~~~~~~ADIVIsAvG~p~~---I~~e~ik~gavVIDvg~n  306 (368)
                            .++.+.++++|+||.++..+..   +..-..+.+.-+|+.|..
T Consensus        97 ~~~i~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~~  145 (228)
T cd00757          97 NERLDAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAVL  145 (228)
T ss_pred             cceeCHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEec
Confidence                  1234567889999999886542   332223445556666654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.85  E-value=0.051  Score=49.50  Aligned_cols=31  Identities=23%  Similarity=0.326  Sum_probs=26.4

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +|.|||+|.. |+.+|.+++..|..|+++..+
T Consensus         1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~   31 (180)
T PF02737_consen    1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRS   31 (180)
T ss_dssp             EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SS
T ss_pred             CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECC
Confidence            6899999875 999999999999999999764

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=94.83  E-value=0.11  Score=53.10  Aligned_cols=95  Identities=20%  Similarity=0.304  Sum_probs=63.6

Q ss_pred             cCCHHHHHHHHHHh---CCCCccceEEEEccC----------------ccchHHHHHHHhhCCCEEEEEeCCC-------
Q 017679          213 PCTPKGCIELLIRS---GVEIMGKNAVVIGRS----------------NIVGLPTSLLLQRHHATVSIVHALT-------  266 (368)
Q Consensus       213 PcTa~gv~~lL~~~---~i~l~GK~VvVIG~g----------------~~VGrpla~lL~~~gAtVti~h~~t-------  266 (368)
                      ++++.-++..+.+.   +-+++||+|+|.|.+                |-.|..+|..|..+||+|+++++..       
T Consensus       163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~  242 (390)
T TIGR00521       163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG  242 (390)
T ss_pred             CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence            56667766665543   246999999999873                3459999999999999999988542       


Q ss_pred             ---------CCH-h----hhccCCCEEEEecCCCCccc----CCCcCC--CcEEEEeecCC
Q 017679          267 ---------KNP-E----QITSEADIVIAAAGVANLVR----GSWLKP--GAVVLDVGTCP  307 (368)
Q Consensus       267 ---------~~L-~----~~~~~ADIVIsAvG~p~~I~----~e~ik~--gavVIDvg~n~  307 (368)
                               .++ +    +...+.|++|.++|...+-.    ..-+++  +...+.+--+|
T Consensus       243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~p  303 (390)
T TIGR00521       243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNP  303 (390)
T ss_pred             cEEEEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCc
Confidence                     122 2    23356899999998766522    222443  23455655554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.79  E-value=0.033  Score=52.15  Aligned_cols=39  Identities=36%  Similarity=0.421  Sum_probs=35.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~   42 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDE   42 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence            468899999999998899999999999999999987753

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=94.78  E-value=0.042  Score=50.66  Aligned_cols=37  Identities=22%  Similarity=0.179  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~   38 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS   38 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence            4789999999998889999999999999999888664

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07063 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.031  Score=52.13  Aligned_cols=37  Identities=24%  Similarity=0.338  Sum_probs=33.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~   40 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLD   40 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999988764

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.77  E-value=0.064  Score=51.92  Aligned_cols=93  Identities=13%  Similarity=-0.039  Sum_probs=59.8

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------CCHhhh
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQI  272 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------~~L~~~  272 (368)
                      ||........|.+..---.|.+|+|.|+++.||..+++++...|++|+.+.+..                    .++.+.
T Consensus       120 ~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~  199 (325)
T TIGR02825       120 GMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEET  199 (325)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHH
Confidence            443344444443333334689999999877789999999999999887665421                    122221


Q ss_pred             c-----cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeec
Q 017679          273 T-----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       273 ~-----~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~  305 (368)
                      +     +..|+|+.++|.+.+ ---++++++..++.+|.
T Consensus       200 ~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~  238 (325)
T TIGR02825       200 LKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA  238 (325)
T ss_pred             HHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecc
Confidence            1     236888888886543 12346788878888875

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK06172 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.031  Score=51.85  Aligned_cols=38  Identities=29%  Similarity=0.354  Sum_probs=34.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~   41 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDA   41 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            47899999999999999999999999999999887763

>PLN02253 xanthoxin dehydrogenase

Probab=94.76  E-value=0.055  Score=51.13  Aligned_cols=37  Identities=32%  Similarity=0.472  Sum_probs=33.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~   51 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ   51 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            4689999999999889999999999999999888654

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.75  E-value=0.035  Score=51.18  Aligned_cols=38  Identities=26%  Similarity=0.385  Sum_probs=34.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++.+|+.++..|+++|++|+++.++.
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~   39 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDA   39 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCH
Confidence            47899999999999999999999999999998886653

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=94.73  E-value=0.034  Score=58.14  Aligned_cols=72  Identities=19%  Similarity=0.283  Sum_probs=52.8

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhh---ccCCCEEEEecCCCCc---
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQI---TSEADIVIAAAGVANL---  288 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~---~~~ADIVIsAvG~p~~---  288 (368)
                      ++.+||.|.. |.++|..|+++|.+|++.+++..                   ++++.   ++++|+||..+.....   
T Consensus         1 ~IG~IGLG~M-G~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~   79 (467)
T TIGR00873         1 DIGVIGLAVM-GSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDA   79 (467)
T ss_pred             CEEEEeeHHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHH
Confidence            3789999886 99999999999999999987531                   12222   2468999988765332   


Q ss_pred             -cc--CCCcCCCcEEEEeecC
Q 017679          289 -VR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 -I~--~e~ik~gavVIDvg~n  306 (368)
                       +.  ...+++|.+|||.|..
T Consensus        80 Vi~~l~~~L~~g~iIID~gns  100 (467)
T TIGR00873        80 VINQLLPLLEKGDIIIDGGNS  100 (467)
T ss_pred             HHHHHHhhCCCCCEEEECCCc
Confidence             21  1357889999999963

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PRK05867 short chain dehydrogenase; Provisional

Probab=94.72  E-value=0.03  Score=52.13  Aligned_cols=38  Identities=26%  Similarity=0.343  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.+..
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~   43 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL   43 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence            47899999999988889999999999999999987753

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.72  E-value=0.14  Score=47.39  Aligned_cols=36  Identities=14%  Similarity=0.206  Sum_probs=31.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      .++.++|+|+|.|+ +|-.++..|...|. ++++++..
T Consensus        18 ~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            46889999999999 59999999999996 79999644

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=94.71  E-value=0.041  Score=51.56  Aligned_cols=37  Identities=16%  Similarity=0.203  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   38 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS   38 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999999888999999999999999998765

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12829 short chain dehydrogenase; Provisional

Probab=94.69  E-value=0.049  Score=50.51  Aligned_cols=37  Identities=16%  Similarity=0.210  Sum_probs=34.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++|+++|+|+++.+|+.++..|+++|++|+++.+.
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~   44 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS   44 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            4799999999999999999999999999999888765

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.68  E-value=0.037  Score=51.62  Aligned_cols=39  Identities=28%  Similarity=0.331  Sum_probs=34.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++.+|..++..|+++|++|+++.+..
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~   46 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKA   46 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            457899999999988899999999999999999987753

>PRK06057 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.035  Score=51.76  Aligned_cols=38  Identities=29%  Similarity=0.339  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .++||+++|+|+++-+|+.++..|+++|++|+++.++.
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~   41 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP   41 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            37899999999988899999999999999999987654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.68  E-value=0.065  Score=49.92  Aligned_cols=37  Identities=22%  Similarity=0.298  Sum_probs=32.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~   40 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS   40 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999998889999999999999999887554

>PRK08265 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.04  Score=51.78  Aligned_cols=38  Identities=29%  Similarity=0.385  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~   40 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA   40 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            47899999999988889999999999999999987753

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.67  E-value=0.052  Score=50.64  Aligned_cols=38  Identities=24%  Similarity=0.265  Sum_probs=34.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~   48 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG   48 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999888665

>PRK08628 short chain dehydrogenase; Provisional

Probab=94.66  E-value=0.047  Score=50.77  Aligned_cols=39  Identities=23%  Similarity=0.248  Sum_probs=34.8

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++++||+++|+|+++-+|+.++..|+++|+.|.++.+.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~   40 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS   40 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC
Confidence            367899999999999889999999999999998887654

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.63  E-value=0.2  Score=54.15  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=31.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -.||+|+|||+|-+ |...|..|.+.|++|+|+.+.
T Consensus       325 ~~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~~  359 (654)
T PRK12769        325 KSDKRVAIIGAGPA-GLACADVLARNGVAVTVYDRH  359 (654)
T ss_pred             cCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence            36899999999987 999999999999999999753

>PRK05717 oxidoreductase; Validated

Probab=94.60  E-value=0.04  Score=51.35  Aligned_cols=39  Identities=21%  Similarity=0.160  Sum_probs=34.5

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ...++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~   43 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD   43 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC
Confidence            456899999999999889999999999999999988543

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.59  E-value=0.047  Score=52.11  Aligned_cols=35  Identities=11%  Similarity=0.312  Sum_probs=30.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~  264 (368)
                      .|++++|+|+|.|++ |..++..|.+.|. ++++++.
T Consensus        21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD~   56 (240)
T TIGR02355        21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLDF   56 (240)
T ss_pred             HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEeC
Confidence            467899999999996 9999999999996 7888853

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=94.59  E-value=0.14  Score=50.30  Aligned_cols=82  Identities=15%  Similarity=0.187  Sum_probs=57.3

Q ss_pred             HHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHhhhcc---CCCEE
Q 017679          223 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQITS---EADIV  279 (368)
Q Consensus       223 L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~~~~~---~ADIV  279 (368)
                      +++.+. ..|++|+|+|+| .||..+++++...|+ .|+++.+..                   .++.+.++   ..|+|
T Consensus       162 l~~~~~-~~g~~VlV~G~G-~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~v  239 (343)
T PRK09880        162 AHQAGD-LQGKRVFVSGVG-PIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVS  239 (343)
T ss_pred             HHhcCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEE
Confidence            444433 379999999986 469999999999998 576664321                   12333222   27999


Q ss_pred             EEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          280 IAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       280 IsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      |.++|.+..+  --+.+++|-.++.+|..
T Consensus       240 id~~G~~~~~~~~~~~l~~~G~iv~~G~~  268 (343)
T PRK09880        240 FEVSGHPSSINTCLEVTRAKGVMVQVGMG  268 (343)
T ss_pred             EECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence            9999986543  24578898899999964

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.58  E-value=0.075  Score=50.73  Aligned_cols=92  Identities=17%  Similarity=0.264  Sum_probs=61.8

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCCC-----------------CHh----
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTK-----------------NPE----  270 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t~-----------------~L~----  270 (368)
                      +|....+...+++.+. ..|++|+|+|.|. +|..+++++...|++ |+++.+...                 +..    
T Consensus       103 ~~~~~ta~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~  180 (280)
T TIGR03366       103 GCATATVMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQG  180 (280)
T ss_pred             hhHHHHHHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHH
Confidence            4443444455555544 3899999999875 699999999999986 776643211                 111    


Q ss_pred             hhc--cCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          271 QIT--SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ~~~--~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      +.+  +.+|++|.++|.+..+  --+.++++..++.+|..
T Consensus       181 ~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~  220 (280)
T TIGR03366       181 GLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSV  220 (280)
T ss_pred             HHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccC
Confidence            111  2489999999977643  23577888888888853

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=94.53  E-value=0.058  Score=54.12  Aligned_cols=75  Identities=24%  Similarity=0.315  Sum_probs=52.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhC-CCEEE-EEeCCC---C--------------------CHhhhccCCCEEEEecCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH-HATVS-IVHALT---K--------------------NPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~-gAtVt-i~h~~t---~--------------------~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .+|.|+|++|.+|+-++.+|.++ +.++. ++.++.   +                    +..+...++|+||.|++...
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~~   80 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHGV   80 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCchH
Confidence            37999999889999999999987 56766 544331   1                    11233358999999997432


Q ss_pred             --cccCCCcCCCcEEEEeecCC
Q 017679          288 --LVRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 --~I~~e~ik~gavVIDvg~n~  307 (368)
                        -+-+...+.|..|||++...
T Consensus        81 s~~~~~~~~~~G~~VIDlS~~f  102 (346)
T TIGR01850        81 SAELAPELLAAGVKVIDLSADF  102 (346)
T ss_pred             HHHHHHHHHhCCCEEEeCChhh
Confidence              12333456799999999764

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=94.52  E-value=0.084  Score=52.92  Aligned_cols=71  Identities=23%  Similarity=0.281  Sum_probs=54.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------------CCCHhhhccCCCEEEEecC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAAAG  284 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------------t~~L~~~~~~ADIVIsAvG  284 (368)
                      ++|.|||+|.. |.++|..|.+.|..|++-.++                            |.|+.+.+..||+|+.+++
T Consensus         2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP   80 (329)
T COG0240           2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP   80 (329)
T ss_pred             ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence            57999999987 999999999999988887542                            3478899999999999998


Q ss_pred             CCCc---cc--CCCcCCCcEEEEee
Q 017679          285 VANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       285 ~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      +-.+   ++  ...+++++.++-+.
T Consensus        81 s~~~r~v~~~l~~~l~~~~~iv~~s  105 (329)
T COG0240          81 SQALREVLRQLKPLLLKDAIIVSAT  105 (329)
T ss_pred             hHHHHHHHHHHhhhccCCCeEEEEe
Confidence            6332   11  14566777666654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=94.52  E-value=0.079  Score=48.88  Aligned_cols=38  Identities=21%  Similarity=0.257  Sum_probs=33.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~   41 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA   41 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            35789999999999888999999999999999888654

>PRK07890 short chain dehydrogenase; Provisional

Probab=94.51  E-value=0.037  Score=51.27  Aligned_cols=36  Identities=25%  Similarity=0.238  Sum_probs=32.9

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++|+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~   38 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART   38 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence            578999999999999999999999999999988764

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.50  E-value=0.1  Score=51.89  Aligned_cols=56  Identities=23%  Similarity=0.383  Sum_probs=43.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC--------------------------CCHhhhccCCCEEEEe
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT--------------------------KNPEQITSEADIVIAA  282 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t--------------------------~~L~~~~~~ADIVIsA  282 (368)
                      ++.+||+|||+|. ||..++..|+..| ++|.++....                          .++ +.+++||+||.+
T Consensus         4 ~~~~KI~IIGaG~-vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t   81 (321)
T PTZ00082          4 IKRRKISLIGSGN-IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT   81 (321)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence            3557999999877 5999999999888 4877776432                          244 578999999999


Q ss_pred             cCCCC
Q 017679          283 AGVAN  287 (368)
Q Consensus       283 vG~p~  287 (368)
                      +|.|.
T Consensus        82 ag~~~   86 (321)
T PTZ00082         82 AGLTK   86 (321)
T ss_pred             CCCCC
Confidence            98653

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.50  E-value=0.14  Score=48.80  Aligned_cols=93  Identities=16%  Similarity=0.122  Sum_probs=60.9

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHh---
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE---  270 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~---  270 (368)
                      ++.+..++..++...+ -.|.+|+|.|.++.+|..+++++...|++|+++.+..                   .++.   
T Consensus       122 ~~~~~ta~~~~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i  200 (324)
T cd08292         122 IAMPLSALMLLDFLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKV  200 (324)
T ss_pred             cccHHHHHHHHHhhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHH
Confidence            4444444444544322 3689999999988889999999999999877664322                   1111   


Q ss_pred             -hhc--cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          271 -QIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 -~~~--~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                       +.+  +..|+|+.++|.+..- --+.++++..++++|..
T Consensus       201 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (324)
T cd08292         201 REAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSM  240 (324)
T ss_pred             HHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecC
Confidence             122  2489999888875331 23456778888888853

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=94.50  E-value=0.06  Score=53.58  Aligned_cols=75  Identities=13%  Similarity=0.135  Sum_probs=52.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC----CCHhhhccCCCEEEEecCCCC--cccCCCcCCCcEEEEeec
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT----KNPEQITSEADIVIAAAGVAN--LVRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t----~~L~~~~~~ADIVIsAvG~p~--~I~~e~ik~gavVIDvg~  305 (368)
                      -+|.|+|++|.+|.-+..+|.++. .++.-..+..    .+..+.+.++|++|.|++.-.  -+-+.....|..|||.+.
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~~~~~~~~~~~~~D~vFlalp~~~s~~~~~~~~~~g~~VIDlSa   81 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAVSLVDNPNTCIIDAST   81 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccccCcCCHhHhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence            379999999999999999999885 4544443332    234556688999999986321  111223356899999986


Q ss_pred             CC
Q 017679          306 CP  307 (368)
Q Consensus       306 n~  307 (368)
                      ..
T Consensus        82 df   83 (310)
T TIGR01851        82 AY   83 (310)
T ss_pred             HH
Confidence            54

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.49  E-value=0.073  Score=52.11  Aligned_cols=53  Identities=21%  Similarity=0.239  Sum_probs=43.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------------CCHhhhcc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------------KNPEQITS  274 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------------~~L~~~~~  274 (368)
                      ++|.|||.|-+ |.++|..|+++|.+|++++++.                                      .++.+.++
T Consensus         3 ~~V~VIG~G~m-G~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~   81 (308)
T PRK06129          3 GSVAIIGAGLI-GRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA   81 (308)
T ss_pred             cEEEEECccHH-HHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence            47999997765 9999999999999999997652                                      23445678


Q ss_pred             CCCEEEEecCCC
Q 017679          275 EADIVIAAAGVA  286 (368)
Q Consensus       275 ~ADIVIsAvG~p  286 (368)
                      ++|+||.++...
T Consensus        82 ~ad~Vi~avpe~   93 (308)
T PRK06129         82 DADYVQESAPEN   93 (308)
T ss_pred             CCCEEEECCcCC
Confidence            999999998653

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=94.48  E-value=0.11  Score=49.90  Aligned_cols=93  Identities=15%  Similarity=-0.001  Sum_probs=60.3

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhc
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT  273 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~  273 (368)
                      |+.....+..|.+..-.-.|.+|+|.|+++.||..++.++...|++|+.+.+..                   .++.+.+
T Consensus       125 ~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v  204 (329)
T cd08294         125 GMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEAL  204 (329)
T ss_pred             ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence            454455555554433334799999999877889999999999999887655321                   1222211


Q ss_pred             -----cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeec
Q 017679          274 -----SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGT  305 (368)
Q Consensus       274 -----~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~  305 (368)
                           ...|+|+.++|.+.+- .-+.++++..++.+|.
T Consensus       205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~  242 (329)
T cd08294         205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS  242 (329)
T ss_pred             HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcc
Confidence                 2368888888764321 2345677777777774

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=94.46  E-value=0.085  Score=53.86  Aligned_cols=71  Identities=27%  Similarity=0.357  Sum_probs=51.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------CCHhhhccCCCEEEE
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQITSEADIVIA  281 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------~~L~~~~~~ADIVIs  281 (368)
                      +|.|||.|- ||.|+|.+|+ .|.+|+.++++.                                .+..+..++||+||.
T Consensus         2 kI~VIGlGy-vGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii   79 (388)
T PRK15057          2 KITISGTGY-VGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII   79 (388)
T ss_pred             EEEEECCCH-HHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence            689999886 5999998777 489999997642                                112344689999999


Q ss_pred             ecCCCC----------ccc------CCCcCCCcEEEEeecCC
Q 017679          282 AAGVAN----------LVR------GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       282 AvG~p~----------~I~------~e~ik~gavVIDvg~n~  307 (368)
                      +++.|-          .+.      .. +++|.+||+-++-+
T Consensus        80 ~Vpt~~~~k~~~~dl~~v~~v~~~i~~-~~~g~lVV~~STv~  120 (388)
T PRK15057         80 ATPTDYDPKTNYFNTSSVESVIKDVVE-INPYAVMVIKSTVP  120 (388)
T ss_pred             eCCCCCccCCCCcChHHHHHHHHHHHh-cCCCCEEEEeeecC
Confidence            999761          111      12 47899999887655

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=94.46  E-value=0.083  Score=50.58  Aligned_cols=53  Identities=28%  Similarity=0.362  Sum_probs=41.5

Q ss_pred             EEEEccCccchHHHHHHHhhCC----CEEEEEeCC-------------------------CCCHhhhccCCCEEEEecCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHH----ATVSIVHAL-------------------------TKNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~-------------------------t~~L~~~~~~ADIVIsAvG~  285 (368)
                      |+|||+|+.+|..++..|+..|    .+|+++..+                         +.++++.+++||+||.++|.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799996678999999998888    578877543                         23556888999999999986


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        81 ~~   82 (263)
T cd00650          81 GR   82 (263)
T ss_pred             CC
Confidence            53

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.45  E-value=0.056  Score=52.39  Aligned_cols=32  Identities=25%  Similarity=0.292  Sum_probs=28.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++|.|||.|.+ |.++|..|++.|..|++++++
T Consensus         4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~   35 (291)
T PRK06035          4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS   35 (291)
T ss_pred             cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence            68999999876 999999999999999999764

>PRK08223 hypothetical protein; Validated

Probab=94.45  E-value=0.075  Score=52.34  Aligned_cols=35  Identities=17%  Similarity=0.205  Sum_probs=31.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~  264 (368)
                      .|+.++|+|||.|+. |-+++.+|++.|. ++++++.
T Consensus        24 kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD~   59 (287)
T PRK08223         24 RLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIADF   59 (287)
T ss_pred             HHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEeC
Confidence            478899999999996 9999999999996 8888853

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=94.44  E-value=0.059  Score=51.27  Aligned_cols=71  Identities=20%  Similarity=0.244  Sum_probs=49.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC----------------CCHhhhccCCCEEEEecCCCC---cccC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVRG  291 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~---~I~~  291 (368)
                      ++.+||.|.+ |.+++..|.+.|.   .+.+++++.                .+..+.++++|+||.++....   ++..
T Consensus         2 ~IgiIG~G~m-G~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~~~~vl~~   80 (258)
T PRK06476          2 KIGFIGTGAI-TEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQIAEEVLRA   80 (258)
T ss_pred             eEEEECcCHH-HHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHHHHHHHHH
Confidence            5899999886 9999999988774   356666532                244556789999999998322   1222


Q ss_pred             CCcCCCcEEEEeec
Q 017679          292 SWLKPGAVVLDVGT  305 (368)
Q Consensus       292 e~ik~gavVIDvg~  305 (368)
                      -++++|.+||++.-
T Consensus        81 l~~~~~~~vis~~a   94 (258)
T PRK06476         81 LRFRPGQTVISVIA   94 (258)
T ss_pred             hccCCCCEEEEECC
Confidence            24567888888763

>PRK05872 short chain dehydrogenase; Provisional

Probab=94.42  E-value=0.038  Score=53.24  Aligned_cols=39  Identities=23%  Similarity=0.294  Sum_probs=34.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|.++|++|.++.++.
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~   43 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE   43 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            357899999999988899999999999999999887753

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.40  E-value=0.11  Score=50.31  Aligned_cols=36  Identities=25%  Similarity=0.023  Sum_probs=31.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -+||+|+|.|+++.+|+.++..|+++|.+|+++.+.
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD   38 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            468999999999999999999999999999876543

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.40  E-value=0.068  Score=49.67  Aligned_cols=36  Identities=14%  Similarity=0.203  Sum_probs=31.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      .|+.++|+|+|.|+. |..++..|++.|. +++++...
T Consensus        18 ~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECCC
Confidence            468899999999986 9999999999997 79998643

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06182 short chain dehydrogenase; Validated

Probab=94.38  E-value=0.073  Score=50.20  Aligned_cols=35  Identities=29%  Similarity=0.139  Sum_probs=31.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~   36 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR   36 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            57999999998888999999999999999988765

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=94.36  E-value=0.11  Score=51.46  Aligned_cols=93  Identities=17%  Similarity=0.199  Sum_probs=62.2

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------Hhh
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQ  271 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~~  271 (368)
                      +|........+...+....|.+++|.|.|. +|..+++++...|+.|+++.+....                     +.+
T Consensus       162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~  240 (357)
T PLN02514        162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE  240 (357)
T ss_pred             hhhHHHHHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence            444444455555555556799999999765 6999999999999987766443211                     112


Q ss_pred             hccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          272 ITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      ....+|++|.++|.+..+  --+.++++..++.+|..
T Consensus       241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~  277 (357)
T PLN02514        241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVI  277 (357)
T ss_pred             hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence            223469999988865433  23567888888888864

>PRK09186 flagellin modification protein A; Provisional

Probab=94.35  E-value=0.049  Score=50.36  Aligned_cols=37  Identities=14%  Similarity=0.209  Sum_probs=33.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~   38 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK   38 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh
Confidence            5799999999988899999999999999998887653

>PRK06841 short chain dehydrogenase; Provisional

Probab=94.35  E-value=0.066  Score=49.60  Aligned_cols=38  Identities=26%  Similarity=0.376  Sum_probs=34.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|..++..|+++|++|+++.+.
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~   48 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS   48 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998889999999999999999988765

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=94.35  E-value=0.063  Score=45.12  Aligned_cols=74  Identities=22%  Similarity=0.210  Sum_probs=47.5

Q ss_pred             eEEEEccCccchHHHHHHHhhC-CCEEEEE-eCCC---CC-------H--------h-hhc--cCCCEEEEecCCCCc--
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRH-HATVSIV-HALT---KN-------P--------E-QIT--SEADIVIAAAGVANL--  288 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~-gAtVti~-h~~t---~~-------L--------~-~~~--~~ADIVIsAvG~p~~--  288 (368)
                      ++.|+|+++.+|+-++..|... +.+++.+ .+..   +.       +        . +.+  .++|+||.+++....  
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~   80 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKE   80 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHHH
Confidence            4788998777788888888774 6665555 3221   00       0        0 112  489999999985432  


Q ss_pred             -cc--CCCcCCCcEEEEeecCC
Q 017679          289 -VR--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       289 -I~--~e~ik~gavVIDvg~n~  307 (368)
                       +.  ...+++|.+|||++...
T Consensus        81 ~~~~~~~~~~~g~~viD~s~~~  102 (122)
T smart00859       81 IAPLLPKAAEAGVKVIDLSSAF  102 (122)
T ss_pred             HHHHHHhhhcCCCEEEECCccc
Confidence             11  22357899999999764

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=94.35  E-value=0.39  Score=49.39  Aligned_cols=134  Identities=22%  Similarity=0.289  Sum_probs=0.0

Q ss_pred             HHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhC--
Q 017679          150 VLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSG--  227 (368)
Q Consensus       150 l~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~--  227 (368)
                      +++.|..+.+-             -+.|..++.+.|-.++.+.. |..|.|-   |+.-.+| |=+-.|.+...++++  
T Consensus       219 FiNEia~ice~-------------~g~D~~~V~~gIGlD~RIG~-~fl~aG~---GyGGsCf-PKD~~AL~~~a~~~~~~  280 (414)
T COG1004         219 FINEIANICEK-------------VGADVKQVAEGIGLDPRIGN-HFLNAGF---GYGGSCF-PKDTKALIANAEELGYD  280 (414)
T ss_pred             HHHHHHHHHHH-------------hCCCHHHHHHHcCCCchhhH-hhCCCCC---CCCCcCC-cHhHHHHHHHHHhcCCc


Q ss_pred             -------------------------CCCccceEEEEc----------cCccchHHHHHHHhhCCCEEEEEeCCC------
Q 017679          228 -------------------------VEIMGKNAVVIG----------RSNIVGLPTSLLLQRHHATVSIVHALT------  266 (368)
Q Consensus       228 -------------------------i~l~GK~VvVIG----------~g~~VGrpla~lL~~~gAtVti~h~~t------  266 (368)
                                               ..++||+|.|.|          |.-. ..+++..|+++||+|.+..-.-      
T Consensus       281 ~~ll~avv~vN~~qk~~~~~~i~~~~~l~Gk~iavlgLafKpnTDD~ReSp-a~~vi~~L~~~Ga~V~aYDP~a~~~~~~  359 (414)
T COG1004         281 PNLLEAVVEVNERRKDKLAEKILNHLGLKGKTIAVLGLAFKPNTDDMRESP-ALDIIKRLQEKGAEVIAYDPVAMENAFR  359 (414)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEEeecCCCccchhch-HHHHHHHHHHCCCEEEEECchhhHHHHh


Q ss_pred             --------CCHhhhccCCCEEEEecCCCCcccCCCcC---CCcEEEE
Q 017679          267 --------KNPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLD  302 (368)
Q Consensus       267 --------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik---~gavVID  302 (368)
                              .++++.++.||++|..+....|-..+|-+   ++.+|||
T Consensus       360 ~~~~~~~~~~~~~~~~~aDaivi~tew~ef~~~d~~~~~m~~~~v~D  406 (414)
T COG1004         360 NFPDVELESDAEEALKGADAIVINTEWDEFRDLDFEKLLMKTPVVID  406 (414)
T ss_pred             cCCCceEeCCHHHHHhhCCEEEEeccHHHHhccChhhhhccCCEEEe

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=94.35  E-value=0.075  Score=52.12  Aligned_cols=36  Identities=14%  Similarity=0.095  Sum_probs=31.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCC--CEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~  265 (368)
                      ++||+++|.|+++.+|+.++..|+++|  ++|+++.+.
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~   39 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD   39 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence            578999999999999999999999886  688887653

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.32  E-value=0.068  Score=53.60  Aligned_cols=36  Identities=19%  Similarity=0.343  Sum_probs=31.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~  264 (368)
                      -.|++++|+|||.|+. |.+++..|.+.|. ++++++.
T Consensus        20 ~~L~~~~VlIiG~Ggl-Gs~va~~La~aGvg~i~lvD~   56 (338)
T PRK12475         20 RKIREKHVLIVGAGAL-GAANAEALVRAGIGKLTIADR   56 (338)
T ss_pred             HhhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence            3578999999999985 9999999999997 8888864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.30  E-value=0.077  Score=48.53  Aligned_cols=37  Identities=27%  Similarity=0.378  Sum_probs=32.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++++|+++|.|+++-+|+.++..|.++|+.|++..++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~   39 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR   39 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence            4689999999998889999999999999988776554

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.28  E-value=0.12  Score=50.33  Aligned_cols=93  Identities=13%  Similarity=-0.009  Sum_probs=59.7

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhh
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQ  271 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~  271 (368)
                      +|.....+..|.+..---.|.+|+|.|+++.||..+++++...|++|+.+.+...                     ++.+
T Consensus       133 ~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~  212 (338)
T cd08295         133 GMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDA  212 (338)
T ss_pred             ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHH
Confidence            5544555556654433347999999999777899999999999998776543211                     2221


Q ss_pred             hc-----cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeec
Q 017679          272 IT-----SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGT  305 (368)
Q Consensus       272 ~~-----~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~  305 (368)
                      .+     ..+|+|+.++|...+- .-+.++++..++.+|.
T Consensus       213 ~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         213 ALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             HHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence            11     2367777777753221 2345677777777774

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=94.28  E-value=0.074  Score=53.33  Aligned_cols=63  Identities=11%  Similarity=0.112  Sum_probs=48.8

Q ss_pred             hHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhccCCCEEEEecCCCCcc----c--CCCcCCCcE
Q 017679          245 GLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGVANLV----R--GSWLKPGAV  299 (368)
Q Consensus       245 Grpla~lL~~~gAtVti~h~~t-------------------~~L~~~~~~ADIVIsAvG~p~~I----~--~e~ik~gav  299 (368)
                      |.++|..|++.|.+|++.+++.                   .+..+.++++|+||+.++.+.-+    .  .+.+++|++
T Consensus        32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~GaI  111 (341)
T TIGR01724        32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENAV  111 (341)
T ss_pred             HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCCE
Confidence            7888888888888888886531                   24568889999999999876532    2  245788999


Q ss_pred             EEEeecCC
Q 017679          300 VLDVGTCP  307 (368)
Q Consensus       300 VIDvg~n~  307 (368)
                      |||.++..
T Consensus       112 VID~STIs  119 (341)
T TIGR01724       112 ICNTCTVS  119 (341)
T ss_pred             EEECCCCC
Confidence            99998764

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.28  E-value=0.068  Score=49.21  Aligned_cols=38  Identities=24%  Similarity=0.203  Sum_probs=34.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~   40 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ   40 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence            47899999999999999999999999999999988765

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.24  E-value=0.061  Score=50.22  Aligned_cols=37  Identities=16%  Similarity=0.279  Sum_probs=33.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|.++-+|+.++..|+++|++|.++.++
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~   40 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD   40 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            4789999999998888999999999999999998765

>PRK09291 short chain dehydrogenase; Provisional

Probab=94.24  E-value=0.073  Score=49.26  Aligned_cols=34  Identities=21%  Similarity=0.225  Sum_probs=30.9

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +|+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~   35 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI   35 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            6789999999999999999999999999887764

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.24  E-value=0.11  Score=51.84  Aligned_cols=73  Identities=21%  Similarity=0.158  Sum_probs=53.1

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------------------CCCHhhhccCCCE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------------TKNPEQITSEADI  278 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------------------t~~L~~~~~~ADI  278 (368)
                      ++|.|||+|-+ |..+|..++..|..|++....                                  +.++++.+.+||+
T Consensus         8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl   86 (321)
T PRK07066          8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF   86 (321)
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence            68999998865 999999999999999998653                                  1356677899999


Q ss_pred             EEEecCCCCcccC-------CCcCCCcEEEEeecCC
Q 017679          279 VIAAAGVANLVRG-------SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       279 VIsAvG~p~~I~~-------e~ik~gavVIDvg~n~  307 (368)
                      ||-++.-.--++.       +..++++ ||+..++.
T Consensus        87 ViEavpE~l~vK~~lf~~l~~~~~~~a-IlaSnTS~  121 (321)
T PRK07066         87 IQESAPEREALKLELHERISRAAKPDA-IIASSTSG  121 (321)
T ss_pred             EEECCcCCHHHHHHHHHHHHHhCCCCe-EEEECCCc
Confidence            9998863221222       2346666 66655443

>PRK08264 short chain dehydrogenase; Validated

Probab=94.24  E-value=0.063  Score=49.18  Aligned_cols=38  Identities=24%  Similarity=0.173  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t  266 (368)
                      ++.+|+++|+|+++-+|+.++..|+++|+ +|+++.+..
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~   41 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP   41 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh
Confidence            36789999999988899999999999999 999998754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.22  E-value=0.052  Score=50.98  Aligned_cols=39  Identities=21%  Similarity=0.255  Sum_probs=35.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.+..+..
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~   44 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ   44 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence            467999999999999999999999999999998887654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.21  E-value=0.093  Score=48.29  Aligned_cols=35  Identities=31%  Similarity=0.382  Sum_probs=31.7

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ||+++|.|+++.+|+.++..|+++|++|+++.|..
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~   35 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGE   35 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            57899999999999999999999999999997753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07774 short chain dehydrogenase; Provisional

Probab=94.20  E-value=0.063  Score=49.48  Aligned_cols=38  Identities=24%  Similarity=0.253  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.+..|..
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~   40 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINA   40 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            46899999999988889999999999999999998753

>PRK09242 tropinone reductase; Provisional

Probab=94.20  E-value=0.044  Score=51.01  Aligned_cols=39  Identities=26%  Similarity=0.252  Sum_probs=34.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..++||+++|+|+++-+|+.++..|.++|++|+++.++.
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~   43 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDA   43 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            357899999999988889999999999999999887653

>PRK07478 short chain dehydrogenase; Provisional

Probab=94.18  E-value=0.051  Score=50.52  Aligned_cols=38  Identities=26%  Similarity=0.345  Sum_probs=33.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|.++|++|.++.+..
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~   40 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQ   40 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            46899999999988889999999999999999887653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.18  E-value=0.1  Score=48.69  Aligned_cols=36  Identities=25%  Similarity=0.252  Sum_probs=32.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +++||.++|.|.++-+|+.++..|+++|++|..+++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~   42 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI   42 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence            578999999999988999999999999999887654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.17  E-value=0.056  Score=50.10  Aligned_cols=38  Identities=34%  Similarity=0.412  Sum_probs=33.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++.+|+.++..|+++|++|.++.+..
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~   41 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQ   41 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCh
Confidence            36799999999999999999999999999998886643

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.17  E-value=0.072  Score=50.93  Aligned_cols=34  Identities=21%  Similarity=0.388  Sum_probs=30.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEe
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH  263 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h  263 (368)
                      .|+.++|+|||.|++ |.+++..|+..|. ++++++
T Consensus        29 ~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD   63 (245)
T PRK05690         29 KLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVD   63 (245)
T ss_pred             HhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEc
Confidence            478899999999986 9999999999996 788885

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=94.17  E-value=0.071  Score=58.22  Aligned_cols=73  Identities=27%  Similarity=0.327  Sum_probs=55.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC--CEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc---cc-
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL---VR-  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~---I~-  290 (368)
                      ++|.|||.|.+ |..++..|.+.|  ..|++++++.                .++.+.+.++|+||.+++...+   +. 
T Consensus         4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~   82 (735)
T PRK14806          4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLAD   82 (735)
T ss_pred             cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence            68999999886 999999999988  4788887653                2355567899999999984321   21 


Q ss_pred             -CCCcCCCcEEEEeecC
Q 017679          291 -GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 -~e~ik~gavVIDvg~n  306 (368)
                       .+.++++.+|+|++..
T Consensus        83 l~~~~~~~~ii~d~~sv   99 (735)
T PRK14806         83 LKPLLSEHAIVTDVGST   99 (735)
T ss_pred             HHHhcCCCcEEEEcCCC
Confidence             1346788999999864

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.17  E-value=0.22  Score=50.15  Aligned_cols=78  Identities=21%  Similarity=0.275  Sum_probs=54.9

Q ss_pred             cccCCHHHHHHHHHHhC------CCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCC------------------
Q 017679          211 FIPCTPKGCIELLIRSG------VEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHAL------------------  265 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~------i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~------------------  265 (368)
                      -+|+++.-.++.|-+..      -.-+|+.|+|+|+|+.||..+.+++...| +.|+.+.+.                  
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~  210 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYK  210 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCC
Confidence            34666655666665555      45679999999999999999999999999 555555433                  


Q ss_pred             CCCHhhhccC-----CCEEEEecCCCCc
Q 017679          266 TKNPEQITSE-----ADIVIAAAGVANL  288 (368)
Q Consensus       266 t~~L~~~~~~-----ADIVIsAvG~p~~  288 (368)
                      +.+..+.+++     .|+|+-++|.+.+
T Consensus       211 ~~~~~e~~kk~~~~~~DvVlD~vg~~~~  238 (347)
T KOG1198|consen  211 DENVVELIKKYTGKGVDVVLDCVGGSTL  238 (347)
T ss_pred             CHHHHHHHHhhcCCCccEEEECCCCCcc
Confidence            1234455554     7888888887543

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.15  E-value=0.049  Score=50.48  Aligned_cols=38  Identities=29%  Similarity=0.345  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++++|+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~   42 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL   42 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            57899999999999999999999999999999887753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.15  E-value=0.057  Score=49.49  Aligned_cols=36  Identities=25%  Similarity=0.338  Sum_probs=33.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++|+++|.|+++.+|+.++..|+++|++|+++.|+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~   39 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC   39 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            578999999999999999999999999999988765

>PRK07060 short chain dehydrogenase; Provisional

Probab=94.14  E-value=0.064  Score=49.16  Aligned_cols=39  Identities=23%  Similarity=0.309  Sum_probs=34.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++.+|+.++..|+++|++|+++.++.
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~   43 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA   43 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            357899999999988889999999999999999887753

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.14  E-value=0.14  Score=51.47  Aligned_cols=93  Identities=15%  Similarity=0.163  Sum_probs=62.0

Q ss_pred             cCCHHHHHHHHHHhCCC-CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------Hh
Q 017679          213 PCTPKGCIELLIRSGVE-IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PE  270 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~-l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~  270 (368)
                      +|....+...+...+.. -.|+.|+|.|.|. +|..+++++...|++|+++.+....                     +.
T Consensus       159 ~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~  237 (375)
T PLN02178        159 LCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMK  237 (375)
T ss_pred             hccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHH
Confidence            45444455555555443 3699999999865 6999999999999988776543211                     11


Q ss_pred             hhccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          271 QITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ~~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      +.+..+|+||.++|.+..+  --+.+++|..++.+|..
T Consensus       238 ~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~  275 (375)
T PLN02178        238 EAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLP  275 (375)
T ss_pred             HhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccC
Confidence            1223479999988876432  23467888888888864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.13  E-value=0.064  Score=50.27  Aligned_cols=37  Identities=16%  Similarity=0.251  Sum_probs=33.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .+++||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~   40 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN   40 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            3578999999999988999999999999999988864

>CHL00194 ycf39 Ycf39; Provisional

Probab=94.13  E-value=0.088  Score=51.22  Aligned_cols=51  Identities=14%  Similarity=0.077  Sum_probs=41.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAG  284 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG  284 (368)
                      +|+|.|++|.+|+.++..|.++|.+|+++.|+..                     ++.+.++.+|+||.+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            7999999999999999999999999998876521                     24456777888887665

>PRK06196 oxidoreductase; Provisional

Probab=94.13  E-value=0.054  Score=52.61  Aligned_cols=39  Identities=31%  Similarity=0.381  Sum_probs=35.4

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~   59 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR   59 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            567899999999998888999999999999999998775

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.12  E-value=0.081  Score=48.85  Aligned_cols=52  Identities=13%  Similarity=0.050  Sum_probs=43.0

Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------------CCHhhhccCCCEEEEecCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      |+|+|+.|.+|++++..|++.+.+|+++.|..                       +.|.+.++.+|.||..++..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence            68999988899999999999999999998864                       13556788889998888743

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.09  E-value=0.11  Score=48.33  Aligned_cols=54  Identities=19%  Similarity=0.137  Sum_probs=44.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~~~~ADIVIsAvG~p  286 (368)
                      +|+.|||+||-+|.-++.-+.++|.+||-+-|+..                   .+.+.+..-|+||+|.|.+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence            47999999999999999999999999998876531                   2335677889999999854

>PRK05854 short chain dehydrogenase; Provisional

Probab=94.09  E-value=0.049  Score=53.14  Aligned_cols=38  Identities=32%  Similarity=0.295  Sum_probs=34.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|++.-+|+.++..|+++|++|+++.|+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~   47 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN   47 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998888999999999999999998775

>PRK07825 short chain dehydrogenase; Provisional

Probab=94.07  E-value=0.053  Score=51.07  Aligned_cols=38  Identities=26%  Similarity=0.293  Sum_probs=33.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~   39 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDE   39 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence            46799999999999899999999999999999887653

>PRK12743 oxidoreductase; Provisional

Probab=94.07  E-value=0.11  Score=48.39  Aligned_cols=35  Identities=23%  Similarity=0.313  Sum_probs=31.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+|+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~   35 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHS   35 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            36899999999999999999999999999888543

>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A

Probab=94.06  E-value=0.072  Score=47.67  Aligned_cols=37  Identities=24%  Similarity=0.406  Sum_probs=31.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+|+|||.|.. |.-++..|++.|.+|++++|+.
T Consensus       164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~~  200 (203)
T PF13738_consen  164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRSP  200 (203)
T ss_dssp             GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS-
T ss_pred             hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecCC
Confidence            578999999999988 9999999999999999999864

...

>PRK06179 short chain dehydrogenase; Provisional

Probab=94.06  E-value=0.1  Score=48.89  Aligned_cols=35  Identities=29%  Similarity=0.131  Sum_probs=31.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~   37 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN   37 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46889999999999999999999999999988775

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=94.06  E-value=0.11  Score=53.56  Aligned_cols=74  Identities=20%  Similarity=0.219  Sum_probs=54.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------------CHhhhccCCCEEEEec
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVIAAA  283 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------------~L~~~~~~ADIVIsAv  283 (368)
                      .+|.|||-|. ||.|+|..|++ +.+|+.++.+..                             .-.+.+++||++|.++
T Consensus         7 mkI~vIGlGy-vGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~V   84 (425)
T PRK15182          7 VKIAIIGLGY-VGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITV   84 (425)
T ss_pred             CeEEEECcCc-chHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEc
Confidence            5799999987 59999999876 689999976521                             0123578999999999


Q ss_pred             CCCC---------ccc------CCCcCCCcEEEEeecCCC
Q 017679          284 GVAN---------LVR------GSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       284 G~p~---------~I~------~e~ik~gavVIDvg~n~~  308 (368)
                      +.|.         .+-      ...+++|.+|||-.+-+.
T Consensus        85 ptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~p  124 (425)
T PRK15182         85 PTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYP  124 (425)
T ss_pred             CCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence            9772         121      134678999999887653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=94.05  E-value=0.054  Score=50.70  Aligned_cols=36  Identities=17%  Similarity=0.234  Sum_probs=33.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS   39 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            689999999998888999999999999999988775

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.051  Score=51.86  Aligned_cols=37  Identities=27%  Similarity=0.344  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~   39 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD   39 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            3789999999999889999999999999999988765

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=94.03  E-value=0.12  Score=54.02  Aligned_cols=52  Identities=25%  Similarity=0.197  Sum_probs=43.4

Q ss_pred             cCCHHHHHH----HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeCC
Q 017679          213 PCTPKGCIE----LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHAL  265 (368)
Q Consensus       213 PcTa~gv~~----lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~~  265 (368)
                      +.|.+|++.    +|++.+.+++||+|+|=|.|+ ||..++..|.+.||+|+ ++.++
T Consensus       214 eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~Gn-Vg~~aa~~L~e~GakVVavSD~~  270 (454)
T PTZ00079        214 EATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGN-VAQYAVEKLLQLGAKVLTMSDSD  270 (454)
T ss_pred             cccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcCC
Confidence            568888654    456778899999999999887 59999999999999877 77665

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=94.03  E-value=0.11  Score=54.55  Aligned_cols=53  Identities=15%  Similarity=0.086  Sum_probs=43.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------CCHhhhccCCCE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI  278 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------~~L~~~~~~ADI  278 (368)
                      ++|.|||.|.+ |.++|..|++.|..|++++++.                                  .++.+.+++||+
T Consensus         5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~   83 (495)
T PRK07531          5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW   83 (495)
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence            57999999876 9999999999999999987542                                  245567899999


Q ss_pred             EEEecCCC
Q 017679          279 VIAAAGVA  286 (368)
Q Consensus       279 VIsAvG~p  286 (368)
                      ||.++...
T Consensus        84 Vieavpe~   91 (495)
T PRK07531         84 IQESVPER   91 (495)
T ss_pred             EEEcCcCC
Confidence            99988744

>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.02  E-value=0.1  Score=53.73  Aligned_cols=35  Identities=29%  Similarity=0.253  Sum_probs=32.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||+|.|+|.|+. |+++|.+|.++|++|+++...
T Consensus         7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~   41 (460)
T PRK01390          7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDN   41 (460)
T ss_pred             cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCC
Confidence            67999999999998 999999999999999999865

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=94.02  E-value=0.13  Score=49.39  Aligned_cols=35  Identities=26%  Similarity=0.116  Sum_probs=30.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +||+|+|.|+++.+|+.++..|+++|.+|+++.+.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~   37 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD   37 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence            47899999998889999999999999998876543

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=94.01  E-value=0.08  Score=53.28  Aligned_cols=77  Identities=18%  Similarity=0.220  Sum_probs=51.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC---------------CCHh-hhccCCCEEEEecCCCCc--c
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNPE-QITSEADIVIAAAGVANL--V  289 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t---------------~~L~-~~~~~ADIVIsAvG~p~~--I  289 (368)
                      ...+|.|+|++|.+|+-+..+|.+++.   ++..+.+..               .++. +.+.++|+||.|+|.-..  +
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~~~   85 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISKKF   85 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHHHH
Confidence            457899999999999999999998653   443333221               0111 345789999999974311  2


Q ss_pred             cCCCcCCCcEEEEeecCC
Q 017679          290 RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       290 ~~e~ik~gavVIDvg~n~  307 (368)
                      -++..+.|+.|||.+-..
T Consensus        86 ~~~~~~~g~~VIDlS~~f  103 (344)
T PLN02383         86 GPIAVDKGAVVVDNSSAF  103 (344)
T ss_pred             HHHHHhCCCEEEECCchh
Confidence            222346799999998654

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=94.01  E-value=0.14  Score=50.62  Aligned_cols=39  Identities=15%  Similarity=0.078  Sum_probs=34.2

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ...-+++|+|+|.|++|.+|..++..|+++|.+|+.+.+
T Consensus         9 ~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~   47 (348)
T PRK15181          9 TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN   47 (348)
T ss_pred             hcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence            345678899999999999999999999999999988754

>PLN02427 UDP-apiose/xylose synthase

Probab=94.00  E-value=0.11  Score=51.84  Aligned_cols=59  Identities=20%  Similarity=0.220  Sum_probs=45.5

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCC----------------------------CHhhhccCC
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK----------------------------NPEQITSEA  276 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~----------------------------~L~~~~~~A  276 (368)
                      .|..++.++|+|.|++|.+|+.++..|+++ |..|..+.+...                            .+.+.++.+
T Consensus         8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   87 (386)
T PLN02427          8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA   87 (386)
T ss_pred             CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence            355677889999999999999999999988 588887764321                            134556789


Q ss_pred             CEEEEecC
Q 017679          277 DIVIAAAG  284 (368)
Q Consensus       277 DIVIsAvG  284 (368)
                      |+||..++
T Consensus        88 d~ViHlAa   95 (386)
T PLN02427         88 DLTINLAA   95 (386)
T ss_pred             CEEEEccc
Confidence            99997765

>PRK08589 short chain dehydrogenase; Validated

Probab=94.00  E-value=0.061  Score=50.93  Aligned_cols=37  Identities=27%  Similarity=0.315  Sum_probs=33.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~   39 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA   39 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence            3689999999998888999999999999999998765

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.00  E-value=0.13  Score=53.78  Aligned_cols=126  Identities=21%  Similarity=0.297  Sum_probs=69.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CHhhhccCC--CEEEEecC--CCCcccCCCcCCCcEEEEee
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQITSEA--DIVIAAAG--VANLVRGSWLKPGAVVLDVG  304 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~~~~~~A--DIVIsAvG--~p~~I~~e~ik~gavVIDvg  304 (368)
                      +.+|+|.|+|-|+. |+++|.+|.++|+.|+.++.... ...+.++..  .+-+.. |  .+..++    ....+|+.-|
T Consensus         5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~~-g~~~~~~~~----~~d~vv~sp~   78 (498)
T PRK02006          5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFVG-GPFDPALLD----GVDLVALSPG   78 (498)
T ss_pred             cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEEe-CCCchhHhc----CCCEEEECCC
Confidence            57899999999998 99999999999999999986532 111223222  111111 1  111121    1245666656


Q ss_pred             cCCCCCCCCC----CCCCCcEEEcccchh-hhhcc------ceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          305 TCPVDVSVDP----SCEYGYRLMGDVCYE-EAMRL------ASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       305 ~n~~~~~~d~----t~~~~~kl~GDVd~~-~~~~~------a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      +++...+.-+    -...+-++.+++++- ...+.      ...+--|-|=-|.-|+..|+.++++.+
T Consensus        79 I~~~~~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGKTTTt~ml~~iL~~~  146 (498)
T PRK02006         79 LSPLEAALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGKTTTTALTGLLCERA  146 (498)
T ss_pred             CCCcccccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence            5542000000    001133567777642 11110      001113457788999999999998764

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=93.99  E-value=0.14  Score=50.48  Aligned_cols=53  Identities=28%  Similarity=0.449  Sum_probs=41.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ++|.|||+|. ||..+|..|+.+|. +|+++....                          .++++ +++||+||.++|.
T Consensus         2 ~KV~VIGaG~-vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGAGF-VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECcCH-HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            4799999876 69999999998874 788886531                          23433 7999999999996


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        80 p~   81 (305)
T TIGR01763        80 PR   81 (305)
T ss_pred             CC
Confidence            53

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=93.98  E-value=0.07  Score=49.89  Aligned_cols=37  Identities=24%  Similarity=0.308  Sum_probs=33.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|+|+++-+|+.++..|.++|+.|.++.+.
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~   40 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS   40 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999998887664

>PRK06194 hypothetical protein; Provisional

Probab=93.98  E-value=0.062  Score=50.85  Aligned_cols=37  Identities=19%  Similarity=0.240  Sum_probs=33.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~   39 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ   39 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3578999999998888999999999999999988765

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=93.97  E-value=0.077  Score=45.53  Aligned_cols=34  Identities=21%  Similarity=0.346  Sum_probs=28.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      +.++|+|+|.|++ |..++..|.+.|. .++++...
T Consensus         1 r~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    1 RNKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             HT-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCCEEEEECcCHH-HHHHHHHHHHhCCCceeecCCc
Confidence            3589999999986 9999999999997 89999643

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=93.97  E-value=0.056  Score=51.03  Aligned_cols=38  Identities=29%  Similarity=0.378  Sum_probs=34.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~   43 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN   43 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998888999999999999999998775

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=93.95  E-value=0.15  Score=49.56  Aligned_cols=76  Identities=12%  Similarity=0.186  Sum_probs=53.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCCCCHh-----------h-hccCCCEEEEecCCCCccc--CCCc
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTKNPE-----------Q-ITSEADIVIAAAGVANLVR--GSWL  294 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t~~L~-----------~-~~~~ADIVIsAvG~p~~I~--~e~i  294 (368)
                      ..|++|+|+|.|. ||..+++++...|++ |.++.+....++           + .-..+|+||-++|.+..+.  -+.+
T Consensus       143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l  221 (308)
T TIGR01202       143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRL  221 (308)
T ss_pred             cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHHHHHHHHhh
Confidence            4688999999876 599999988889997 444533221111           0 1134799999999876543  3678


Q ss_pred             CCCcEEEEeecC
Q 017679          295 KPGAVVLDVGTC  306 (368)
Q Consensus       295 k~gavVIDvg~n  306 (368)
                      +++..++-+|..
T Consensus       222 ~~~G~iv~~G~~  233 (308)
T TIGR01202       222 AKGGEIVLAGFY  233 (308)
T ss_pred             hcCcEEEEEeec
Confidence            888888888864

>PRK06223 malate dehydrogenase; Reviewed

Probab=93.94  E-value=0.15  Score=49.73  Aligned_cols=53  Identities=26%  Similarity=0.404  Sum_probs=41.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      +||.|||+|. ||..++..|+..|. +|.+++...                          .+. +.+++||+||.++|.
T Consensus         3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~   80 (307)
T PRK06223          3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV   80 (307)
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence            5899999965 59999999998764 888887531                          233 457999999999987


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        81 p~   82 (307)
T PRK06223         81 PR   82 (307)
T ss_pred             CC
Confidence            64

>PRK07856 short chain dehydrogenase; Provisional

Probab=93.92  E-value=0.094  Score=48.76  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=33.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~   39 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR   39 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999989999999999999999888764

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=93.92  E-value=0.13  Score=50.69  Aligned_cols=52  Identities=21%  Similarity=0.279  Sum_probs=41.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCC--CEEEEEeCCCC-------CH----------------hhhccCCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK-------NP----------------EQITSEADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t~-------~L----------------~~~~~~ADIVIsAvG~p  286 (368)
                      +|.|||.|. ||.+++..|+.+|  ..|.++.+...       ++                .+.+++||+||.++|.|
T Consensus         2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~   78 (308)
T cd05292           2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN   78 (308)
T ss_pred             EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence            699999976 6999999999999  47888876531       01                24578999999999975

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07576 short chain dehydrogenase; Provisional

Probab=93.91  E-value=0.07  Score=50.30  Aligned_cols=37  Identities=27%  Similarity=0.413  Sum_probs=33.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~   42 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS   42 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999998889999999999999999998765

>cd08293 PTGR2 Prostaglandin reductase

Probab=93.91  E-value=0.14  Score=49.73  Aligned_cols=74  Identities=14%  Similarity=0.068  Sum_probs=51.1

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------CCHhhhc-----cCCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------KNPEQIT-----SEADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------~~L~~~~-----~~ADIVIsAvG~  285 (368)
                      |.+|+|.|+++.||..+++++...|+ .|+.+.+..                    .++.+.+     +..|+|+.++|.
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~  234 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG  234 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence            48999999977789999999999998 787764431                    1222211     247888888886


Q ss_pred             CCcc-cCCCcCCCcEEEEeec
Q 017679          286 ANLV-RGSWLKPGAVVLDVGT  305 (368)
Q Consensus       286 p~~I-~~e~ik~gavVIDvg~  305 (368)
                      +.+- .-+.++++..++.+|.
T Consensus       235 ~~~~~~~~~l~~~G~iv~~G~  255 (345)
T cd08293         235 EISDTVISQMNENSHIILCGQ  255 (345)
T ss_pred             HHHHHHHHHhccCCEEEEEee
Confidence            5431 2345778878888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=93.91  E-value=0.18  Score=46.27  Aligned_cols=94  Identities=28%  Similarity=0.362  Sum_probs=63.7

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhh-
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQI-  272 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~-  272 (368)
                      |+....++..+.....-..|++++|.|.|. +|..++.++...|++|+.+.+...                   +..+. 
T Consensus       116 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  194 (271)
T cd05188         116 PEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEEL  194 (271)
T ss_pred             cCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHH
Confidence            444444555555555446799999999999 899999999999999887765421                   11111 


Q ss_pred             ----ccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecCC
Q 017679          273 ----TSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       273 ----~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n~  307 (368)
                          -...|++|.++|.+..+  ..+.++++..++++|...
T Consensus       195 ~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         195 RLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             HHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence                24579999888863322  234667777888888653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=93.90  E-value=0.062  Score=50.04  Aligned_cols=37  Identities=22%  Similarity=0.224  Sum_probs=33.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++|+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~   40 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP   40 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCH
Confidence            6789999999988899999999999999999887653

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.89  E-value=0.13  Score=50.07  Aligned_cols=72  Identities=17%  Similarity=0.209  Sum_probs=52.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------------CCHhhhcc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------------KNPEQITS  274 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------------~~L~~~~~  274 (368)
                      ++|.|||+|.. |.++|..|+..|..|+++++..                                      .++ +.++
T Consensus         6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~   83 (286)
T PRK07819          6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFA   83 (286)
T ss_pred             cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhC
Confidence            48999999875 9999999999999999997542                                      133 4478


Q ss_pred             CCCEEEEecCCCCcccC-------CCc-CCCcEEEEeecC
Q 017679          275 EADIVIAAAGVANLVRG-------SWL-KPGAVVLDVGTC  306 (368)
Q Consensus       275 ~ADIVIsAvG~p~~I~~-------e~i-k~gavVIDvg~n  306 (368)
                      +||+||-++.--.-++.       .+. ++++++..-.+.
T Consensus        84 ~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS~  123 (286)
T PRK07819         84 DRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTSS  123 (286)
T ss_pred             CCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence            99999999863221222       345 678888665443

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=93.88  E-value=0.067  Score=53.75  Aligned_cols=77  Identities=18%  Similarity=0.220  Sum_probs=53.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhhC---CCEEEEEeCCC---------------CCHhhhc-cCCCEEEEecCCCC--cc
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRH---HATVSIVHALT---------------KNPEQIT-SEADIVIAAAGVAN--LV  289 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~---gAtVti~h~~t---------------~~L~~~~-~~ADIVIsAvG~p~--~I  289 (368)
                      ++.+|.|||++|.||+-+..+|.++   ..++..+.+..               .++.+.. .++|+++.|+|..-  -+
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~~~s~~~   82 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGREASAAY   82 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCHHHHHHH
Confidence            4678999999999999999999984   35666665542               1222222 67899999996421  13


Q ss_pred             cCCCcCCCcEEEEeecCC
Q 017679          290 RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       290 ~~e~ik~gavVIDvg~n~  307 (368)
                      -++..+.|+.|||.+-..
T Consensus        83 ~~~~~~~g~~VIDlS~~f  100 (336)
T PRK08040         83 AEEATNAGCLVIDSSGLF  100 (336)
T ss_pred             HHHHHHCCCEEEECChHh
Confidence            333456799999998654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=93.88  E-value=0.081  Score=48.79  Aligned_cols=37  Identities=32%  Similarity=0.422  Sum_probs=33.3

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++||+++|.|.++.+|+.++..|+++|++|.++.|+.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~   38 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLND   38 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence            5789999999999999999999999999999887753

>PRK05225 ketol-acid reductoisomerase; Validated

Probab=93.86  E-value=0.056  Score=56.48  Aligned_cols=78  Identities=23%  Similarity=0.247  Sum_probs=55.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhccCCCEEEEecCCCC--
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGVAN--  287 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~~~ADIVIsAvG~p~--  287 (368)
                      .|+||+|+|||.|.. |+.-|..|...|.+|++.-|..                   .++.+.+++||+|+..++--.  
T Consensus        33 ~LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~  111 (487)
T PRK05225         33 YLKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHS  111 (487)
T ss_pred             HhCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHH
Confidence            368999999999986 9988888888899888554431                   257788999999999987321  


Q ss_pred             cccC---CCcCCCcE-EEEeecCC
Q 017679          288 LVRG---SWLKPGAV-VLDVGTCP  307 (368)
Q Consensus       288 ~I~~---e~ik~gav-VIDvg~n~  307 (368)
                      .|-.   ..+|+|++ .+-=|+|-
T Consensus       112 ~v~~~i~p~LK~Ga~L~fsHGFni  135 (487)
T PRK05225        112 DVVRAVQPLMKQGAALGYSHGFNI  135 (487)
T ss_pred             HHHHHHHhhCCCCCEEEecCCcee
Confidence            2222   35677753 33444443

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.84  E-value=0.14  Score=52.42  Aligned_cols=124  Identities=18%  Similarity=0.211  Sum_probs=68.9

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC-HhhhccC--CCEEEEecCCCCcccCCCc-CCCcEEEEeec
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-PEQITSE--ADIVIAAAGVANLVRGSWL-KPGAVVLDVGT  305 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~-L~~~~~~--ADIVIsAvG~p~~I~~e~i-k~gavVIDvg~  305 (368)
                      +.||+++|+|.|+. |+.+|.+|.++|++|++.+..... ..+.++.  .-+.+. .|..   ..+.+ ..+.+|+--|+
T Consensus         3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~-~g~~---~~~~~~~~d~vv~spgi   77 (445)
T PRK04308          3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFY-TGRL---KDALDNGFDILALSPGI   77 (445)
T ss_pred             CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEE-eCCC---CHHHHhCCCEEEECCCC
Confidence            57899999999987 999999999999999998754321 1111221  011111 1110   00001 12445555555


Q ss_pred             CCCCCCCCCCCCCCcEEEcccchh-hhhc----cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          306 CPVDVSVDPSCEYGYRLMGDVCYE-EAMR----LASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       306 n~~~~~~d~t~~~~~kl~GDVd~~-~~~~----~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      ++.....-.-.+.+-++.++.++- ...+    ..-   -|-|=-|.-|+..|+.++++.+
T Consensus        78 ~~~~p~~~~a~~~~i~v~~~~~~~~~~~~~~~~~~I---~ITGT~GKTTTt~li~~iL~~~  135 (445)
T PRK04308         78 SERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVI---AITGSNGKTTVTSLVGYLCIKC  135 (445)
T ss_pred             CCCCHHHHHHHHcCCcEEEhHHHHHHhhhcCCCCEE---EEECCCcHHHHHHHHHHHHHHc
Confidence            543100000001234577777762 2111    223   3457788999999999988764

>PRK06500 short chain dehydrogenase; Provisional

Probab=93.83  E-value=0.064  Score=49.32  Aligned_cols=36  Identities=28%  Similarity=0.361  Sum_probs=32.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||+++|.|+++-+|+.++..|+++|++|++..++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~   39 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRD   39 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence            579999999999999999999999999999887654

>PRK07814 short chain dehydrogenase; Provisional

Probab=93.82  E-value=0.062  Score=50.46  Aligned_cols=38  Identities=24%  Similarity=0.232  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~   44 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTE   44 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            47899999999999899999999999999998887653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=93.82  E-value=0.085  Score=49.35  Aligned_cols=37  Identities=22%  Similarity=0.267  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~   41 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA   41 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc
Confidence            5789999999999999999999999999999887653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.81  E-value=0.079  Score=48.45  Aligned_cols=38  Identities=24%  Similarity=0.329  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|..++..|.++|++|++..++.
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~   39 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE   39 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            36899999999999999999999999999999887754

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=93.76  E-value=0.095  Score=49.52  Aligned_cols=52  Identities=15%  Similarity=0.188  Sum_probs=42.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC------HhhhccCC--CEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------PEQITSEA--DIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~------L~~~~~~A--DIVIsAvG~  285 (368)
                      +|+|+|+++.+|+.++..|+++|.+|+++.+...|      +.+.+..+  |+||..+|.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAY   60 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence            58999998899999999999999999998876432      44556655  999988774

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.76  E-value=0.099  Score=47.52  Aligned_cols=38  Identities=32%  Similarity=0.368  Sum_probs=33.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++.+|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~   39 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNE   39 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            35689999999999999999999999999999888764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=93.69  E-value=0.11  Score=51.06  Aligned_cols=59  Identities=20%  Similarity=0.111  Sum_probs=45.3

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------------CHhhhccCCCEEE
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------NPEQITSEADIVI  280 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------------~L~~~~~~ADIVI  280 (368)
                      +-+-++++|+|.|+++.+|+.++..|+++|++|+++.+...                          .+.+.++..|+||
T Consensus         5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (353)
T PLN02896          5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF   84 (353)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence            34567899999999999999999999999999988754321                          1234456789999


Q ss_pred             EecCC
Q 017679          281 AAAGV  285 (368)
Q Consensus       281 sAvG~  285 (368)
                      ..++.
T Consensus        85 h~A~~   89 (353)
T PLN02896         85 HVAAS   89 (353)
T ss_pred             ECCcc
Confidence            77764

>cd08230 glucose_DH Glucose dehydrogenase

Probab=93.68  E-value=0.13  Score=50.58  Aligned_cols=77  Identities=27%  Similarity=0.359  Sum_probs=55.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC---C------------------CCHh--hhccCCCEEEEecCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---T------------------KNPE--QITSEADIVIAAAGVA  286 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~---t------------------~~L~--~~~~~ADIVIsAvG~p  286 (368)
                      ..|++|+|+|.|. ||..+++++...|++|+++.+.   .                  .++.  .....+|+||.++|.+
T Consensus       171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~  249 (355)
T cd08230         171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP  249 (355)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence            4799999999865 6999999999999998887652   1                  0111  1123479999999987


Q ss_pred             Cccc--CCCcCCCcEEEEeecCC
Q 017679          287 NLVR--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       287 ~~I~--~e~ik~gavVIDvg~n~  307 (368)
                      ..+.  -+.++++..++-+|...
T Consensus       250 ~~~~~~~~~l~~~G~~v~~G~~~  272 (355)
T cd08230         250 PLAFEALPALAPNGVVILFGVPG  272 (355)
T ss_pred             HHHHHHHHHccCCcEEEEEecCC
Confidence            5432  35678877777777643

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN00198 anthocyanidin reductase; Provisional

Probab=93.64  E-value=0.18  Score=49.14  Aligned_cols=36  Identities=22%  Similarity=0.146  Sum_probs=31.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +.++|+|+|.|+++-+|+.++..|+++|++|.++.+
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r   41 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR   41 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence            567999999999999999999999999999876643

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=93.64  E-value=0.086  Score=51.15  Aligned_cols=40  Identities=33%  Similarity=0.373  Sum_probs=36.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      ..++||.++|-|++.-+|+++|.+|++.||+|+++.|+..
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~   43 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEE   43 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4589999999999888899999999999999999988753

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.64  E-value=0.088  Score=52.45  Aligned_cols=76  Identities=16%  Similarity=0.153  Sum_probs=51.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-C---CHhhhccCCCEEEEecCCCC--cccCCCcCCCcEEEEeec
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-K---NPEQITSEADIVIAAAGVAN--LVRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-~---~L~~~~~~ADIVIsAvG~p~--~I~~e~ik~gavVIDvg~  305 (368)
                      -+|.|||+++.+|.-+..+|.++.- ++.-..+.. .   +.++...++|+||.|++.-.  -+-+...+.|..|||.+.
T Consensus         3 ~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~~~~~~~~~~~~DvvFlalp~~~s~~~~~~~~~~g~~VIDlSa   82 (313)
T PRK11863          3 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKDAAARRELLNAADVAILCLPDDAAREAVALIDNPATRVIDAST   82 (313)
T ss_pred             cEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCcccCchhhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence            3799999999999999999998863 433332321 1   22334478999999985311  122233467899999997


Q ss_pred             CCC
Q 017679          306 CPV  308 (368)
Q Consensus       306 n~~  308 (368)
                      ...
T Consensus        83 dfR   85 (313)
T PRK11863         83 AHR   85 (313)
T ss_pred             hhh
Confidence            653

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.63  E-value=0.089  Score=48.32  Aligned_cols=38  Identities=21%  Similarity=0.411  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++++|+++|.|+++-+|+.++..|+++|++|.+++|+.
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~   41 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE   41 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            35789999999999999999999999999999998764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.62  E-value=0.091  Score=48.00  Aligned_cols=38  Identities=34%  Similarity=0.429  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEE-eCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV-HALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~-h~~t  266 (368)
                      ++.+|+++|+|+++-+|+.++..|+++|++|++. .++.
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~   40 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE   40 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence            4788999999998889999999999999999888 6653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.62  E-value=0.17  Score=46.55  Aligned_cols=36  Identities=19%  Similarity=0.251  Sum_probs=31.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ++++|+++|.|+++-+|+.++..|+++|+.|++..+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~   38 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK   38 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            357899999999999999999999999999876543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=93.61  E-value=0.12  Score=51.84  Aligned_cols=54  Identities=11%  Similarity=0.055  Sum_probs=42.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------C------HhhhccCCCEEEEecC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------N------PEQITSEADIVIAAAG  284 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~------L~~~~~~ADIVIsAvG  284 (368)
                      ++|+|+|.|++|.||+.++..|.++|.+|+.+.+...               |      +...++++|+||..++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            6799999999999999999999999999998865321               1      2234567899997765

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=93.58  E-value=0.13  Score=51.75  Aligned_cols=70  Identities=17%  Similarity=0.205  Sum_probs=52.0

Q ss_pred             eEEEEccCccchHHHHHHHhhCC--------CEEEEEeC-----C----------------------------CCCHhhh
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH--------ATVSIVHA-----L----------------------------TKNPEQI  272 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g--------AtVti~h~-----~----------------------------t~~L~~~  272 (368)
                      +|+|||+|.. |.++|..|.++|        .+|++..+     .                            +.++++.
T Consensus         1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea   79 (342)
T TIGR03376         1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA   79 (342)
T ss_pred             CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence            5899999886 999999999888        78988865     1                            1357788


Q ss_pred             ccCCCEEEEecCCCCc---cc--CCCcCCCcEEEEee
Q 017679          273 TSEADIVIAAAGVANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      +++||+||.|++.-.+   +.  ..+++++..+|-+.
T Consensus        80 l~~ADiIIlAVPs~~i~~vl~~l~~~l~~~~~iVs~t  116 (342)
T TIGR03376        80 AKGADILVFVIPHQFLEGICKQLKGHVKPNARAISCI  116 (342)
T ss_pred             HhcCCEEEEECChHHHHHHHHHHHhhcCCCCEEEEEe
Confidence            9999999999975322   11  23567777676653

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=93.57  E-value=0.16  Score=47.57  Aligned_cols=54  Identities=11%  Similarity=0.095  Sum_probs=41.0

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCC---CE-EEEEeCCC----------------CCHhhhccCCCEEEEecCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHH---AT-VSIVHALT----------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~g---At-Vti~h~~t----------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ++.+|.|||.|.. |..++..|.+.+   .+ ++++++..                .+.++.+.++|+||.+++.
T Consensus         3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~   76 (245)
T PRK07634          3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP   76 (245)
T ss_pred             CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence            4578999999886 999999998776   23 66666531                2455677899999999874

>PRK06139 short chain dehydrogenase; Provisional

Probab=93.57  E-value=0.061  Score=53.33  Aligned_cols=38  Identities=21%  Similarity=0.262  Sum_probs=34.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++++|+++|.|+|+-+|+.++..|+++|++|.++.++.
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~   41 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDE   41 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            46899999999988889999999999999999998753

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.54  E-value=0.087  Score=50.77  Aligned_cols=31  Identities=19%  Similarity=0.190  Sum_probs=27.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ++|.|||.|.+ |.+++..|++.|.+|++++.
T Consensus         4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~   34 (282)
T PRK05808          4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDI   34 (282)
T ss_pred             cEEEEEccCHH-HHHHHHHHHHCCCceEEEeC
Confidence            57999999875 99999999999999999974

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=93.53  E-value=0.13  Score=52.07  Aligned_cols=39  Identities=21%  Similarity=0.140  Sum_probs=34.6

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +...+|++|+|+|+++-+|+.++..|+++|..|+++.|.
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~   93 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE   93 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence            456789999999999999999999999999999888764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.52  E-value=0.097  Score=49.07  Aligned_cols=36  Identities=22%  Similarity=0.261  Sum_probs=31.4

Q ss_pred             CccceEEEEccC--ccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g--~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||.++|.|+|  .-+|+.++..|+++|++|.++.++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~   42 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN   42 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence            689999999997  335999999999999999988654

>cd00704 MDH Malate dehydrogenase

Probab=93.50  E-value=0.17  Score=50.44  Aligned_cols=54  Identities=13%  Similarity=0.331  Sum_probs=40.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC-------EEEEEeCCC--------------------------CCHhhhccCCCEEE
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA-------TVSIVHALT--------------------------KNPEQITSEADIVI  280 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA-------tVti~h~~t--------------------------~~L~~~~~~ADIVI  280 (368)
                      ||+|+|++|.||..++..|+..+.       ++.+.....                          .+..+.+++||+||
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV   81 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI   81 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence            799999966679999999987662       266665432                          23457889999999


Q ss_pred             EecCCCC
Q 017679          281 AAAGVAN  287 (368)
Q Consensus       281 sAvG~p~  287 (368)
                      .+.|.|.
T Consensus        82 itAG~~~   88 (323)
T cd00704          82 LVGAFPR   88 (323)
T ss_pred             EeCCCCC
Confidence            9999754

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=93.48  E-value=0.12  Score=48.32  Aligned_cols=36  Identities=14%  Similarity=0.233  Sum_probs=31.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      .|+.++|+|||.|++ |..++..|.+.|. ++++++..
T Consensus        25 ~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence            468899999999986 9999999999997 68888643

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.47  E-value=0.1  Score=52.87  Aligned_cols=36  Identities=25%  Similarity=0.455  Sum_probs=31.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      .+++++|+|+|.|++ |..++..|.+.|. ++++++..
T Consensus       132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence            367899999999996 9999999999997 78888653

>PRK12742 oxidoreductase; Provisional

Probab=93.46  E-value=0.11  Score=47.37  Aligned_cols=36  Identities=25%  Similarity=0.299  Sum_probs=31.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|.+..+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~   38 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA   38 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence            368999999999888899999999999999877644

>PRK07326 short chain dehydrogenase; Provisional

Probab=93.43  E-value=0.08  Score=48.38  Aligned_cols=37  Identities=24%  Similarity=0.273  Sum_probs=33.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +.|++++|+|+++-+|+.++..|+++|++|+++.|+.
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~   40 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQ   40 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCH
Confidence            4689999999989899999999999999999988653

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=93.43  E-value=0.37  Score=45.16  Aligned_cols=94  Identities=20%  Similarity=0.196  Sum_probs=62.1

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CC----H
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KN----P  269 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~----L  269 (368)
                      +|....++..+.+..--.+|++++|.|.++.+|..++.++...|++|++..++.                   .+    +
T Consensus       126 ~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  205 (325)
T cd08253         126 GIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRI  205 (325)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHH
Confidence            444455555555433344799999999877789999999999999987765421                   11    1


Q ss_pred             hhhc--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          270 EQIT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       270 ~~~~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      .+.+  +..|+++.++|.... ...++++++..++++|..
T Consensus       206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~  245 (325)
T cd08253         206 LAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSG  245 (325)
T ss_pred             HHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeec
Confidence            1222  247888888776543 233566777778888864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.42  E-value=0.08  Score=48.58  Aligned_cols=36  Identities=17%  Similarity=0.249  Sum_probs=32.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++|++++|+|.++-+|+.++..|.++|++|+++.+.
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~   38 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN   38 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            689999999997778999999999999999888765

>PRK06114 short chain dehydrogenase; Provisional

Probab=93.33  E-value=0.13  Score=47.99  Aligned_cols=38  Identities=24%  Similarity=0.309  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||.++|.|.++-+|+.++..|.++|++|.++.++.
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~   42 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRT   42 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence            57899999999998899999999999999999987653

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=93.32  E-value=0.17  Score=49.16  Aligned_cols=93  Identities=26%  Similarity=0.292  Sum_probs=61.6

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCCC-------------------C---
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTK-------------------N---  268 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t~-------------------~---  268 (368)
                      ++|.....+..++..++ ..|.+|+|+|.| .+|..+++++...|+. |+++.+...                   +   
T Consensus       145 l~~~~~ta~~~l~~~~~-~~g~~vlV~G~G-~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~  222 (339)
T cd08239         145 LLCGIGTAYHALRRVGV-SGRDTVLVVGAG-PVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQE  222 (339)
T ss_pred             hcchHHHHHHHHHhcCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHH
Confidence            34444444555555444 359999999975 5699999999999998 877654311                   1   


Q ss_pred             Hhhhcc--CCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679          269 PEQITS--EADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       269 L~~~~~--~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      +.+.+.  .+|+||.++|.+..+.  -+.++++..++-+|..
T Consensus       223 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  264 (339)
T cd08239         223 IRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEG  264 (339)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence            112222  4799999988765432  3567787777778864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=93.29  E-value=0.18  Score=48.83  Aligned_cols=52  Identities=12%  Similarity=0.104  Sum_probs=40.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC----CEEEEEeCCC-----------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT-----------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t-----------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      .++.|||.|.+ |..++..|.+.|    .+|+++.++.                 .+..+.++++|+||.++..
T Consensus         2 ~~I~iIG~G~m-G~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp   74 (277)
T PRK06928          2 EKIGFIGYGSM-ADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPP   74 (277)
T ss_pred             CEEEEECccHH-HHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCH
Confidence            36899999876 999999999887    5788876542                 2334557889999999873

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=93.28  E-value=0.28  Score=50.01  Aligned_cols=76  Identities=22%  Similarity=0.281  Sum_probs=55.6

Q ss_pred             CCCccceEEEEccC---------ccchHHHHHHHhhCCCEEEEEeCCC-----------CCHhhhccCCCEEEEecCCCC
Q 017679          228 VEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       228 i~l~GK~VvVIG~g---------~~VGrpla~lL~~~gAtVti~h~~t-----------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .++.||+|.|+|-+         +.-...++..|.++|++|.+..-.-           .++.+.++.||+||.++..+.
T Consensus       309 ~~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~~v~~t~~~~  388 (411)
T TIGR03026       309 GPLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADALVILTDHDE  388 (411)
T ss_pred             hcccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCEEEEecCCHH
Confidence            36899999999932         2236788999999999999886431           366778999999999999887


Q ss_pred             cccCC--CcCC---CcEEEEe
Q 017679          288 LVRGS--WLKP---GAVVLDV  303 (368)
Q Consensus       288 ~I~~e--~ik~---gavVIDv  303 (368)
                      |-..+  .+++   ..+|||.
T Consensus       389 ~~~~~~~~~~~~~~~~~v~D~  409 (411)
T TIGR03026       389 FKDLDLEKIKDLMKGKVVVDT  409 (411)
T ss_pred             HhccCHHHHHHhcCCCEEEeC
Confidence            73322  2321   3478883

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.28  E-value=0.14  Score=46.60  Aligned_cols=37  Identities=32%  Similarity=0.282  Sum_probs=32.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++|+++|.|.++-+|+.++..|+++|++|++..++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~   38 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS   38 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4688999999999999999999999999999777654

>PRK05875 short chain dehydrogenase; Provisional

Probab=93.27  E-value=0.084  Score=49.66  Aligned_cols=37  Identities=22%  Similarity=0.154  Sum_probs=33.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~   40 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN   40 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence            4689999999998888999999999999999988764

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=93.25  E-value=0.18  Score=50.09  Aligned_cols=93  Identities=22%  Similarity=0.278  Sum_probs=58.0

Q ss_pred             cCCHHHHHHHHHH-hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhh
Q 017679          213 PCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI  272 (368)
Q Consensus       213 PcTa~gv~~lL~~-~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~  272 (368)
                      |++..-.+.+|.. ++... |.+|+|.|+++.||..+.+++...|++|.+.-+..                   .++.+.
T Consensus       124 ~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~  202 (326)
T COG0604         124 PLAGLTAWLALFDRAGLKP-GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQ  202 (326)
T ss_pred             HHHHHHHHHHHHHhcCCCC-CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHH
Confidence            4444444555554 33333 99999999888899999999999996544433221                   123332


Q ss_pred             c------cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          273 T------SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ~------~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                      +      +..|+|+..+|...+- .-..++++-.++.+|..
T Consensus       203 v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~  243 (326)
T COG0604         203 VRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL  243 (326)
T ss_pred             HHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecC
Confidence            2      2478888888866542 34456666666666653

>PRK08643 acetoin reductase; Validated

Probab=93.25  E-value=0.097  Score=48.59  Aligned_cols=34  Identities=26%  Similarity=0.257  Sum_probs=31.3

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ||.++|+|+++-+|+.++..|+++|++|.++.+.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~   35 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN   35 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            7899999999999999999999999999888765

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=93.22  E-value=0.24  Score=49.16  Aligned_cols=53  Identities=21%  Similarity=0.429  Sum_probs=40.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      .||.|||+|. ||..+|..|+..|.  ++.+++.+.                         .+. +.+++|||||.++|.
T Consensus         4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy-~~~~~adivvitaG~   81 (312)
T cd05293           4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY-SVTANSKVVIVTAGA   81 (312)
T ss_pred             CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH-HHhCCCCEEEECCCC
Confidence            4899999976 59999999988874  677776432                         133 458999999999996


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        82 ~~   83 (312)
T cd05293          82 RQ   83 (312)
T ss_pred             CC
Confidence            43

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02214 cinnamoyl-CoA reductase

Probab=93.20  E-value=0.21  Score=49.28  Aligned_cols=35  Identities=20%  Similarity=0.100  Sum_probs=31.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +++|+|+|.|+++.+|+.++..|+++|..|+.+.+
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r   42 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR   42 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            57899999999889999999999999999887755

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=93.20  E-value=0.14  Score=47.72  Aligned_cols=37  Identities=27%  Similarity=0.292  Sum_probs=33.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~   41 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS   41 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence            3689999999999889999999999999999988764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.19  E-value=0.12  Score=49.21  Aligned_cols=36  Identities=17%  Similarity=0.258  Sum_probs=31.2

Q ss_pred             CccceEEEEccCc--cchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~--~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||.++|.|+|.  -+|+.+|..|+++|++|.++.++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~   42 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQG   42 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCc
Confidence            6899999999973  34999999999999999988654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.16  E-value=0.14  Score=48.09  Aligned_cols=37  Identities=16%  Similarity=0.266  Sum_probs=32.1

Q ss_pred             CCCccceEEEEccC---ccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g---~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+|   ++ |+.++..|+++|++|.++.++
T Consensus         6 ~~~~~k~~lItGas~g~GI-G~a~a~~la~~G~~v~l~~r~   45 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSI-AWGCARAFRALGAELAVTYLN   45 (258)
T ss_pred             cccCCCEEEEECCCCCCcH-HHHHHHHHHHcCCEEEEEeCC
Confidence            35789999999986   55 999999999999999988665

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=93.11  E-value=0.32  Score=46.32  Aligned_cols=94  Identities=16%  Similarity=0.091  Sum_probs=63.2

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------C--C----H
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------K--N----P  269 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------~--~----L  269 (368)
                      ++.+..++..+...+....|.+++|.|.++.+|..++.++..+|+.|++..+..                 .  +    +
T Consensus       120 ~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  199 (323)
T cd05282         120 YINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRV  199 (323)
T ss_pred             hccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHH
Confidence            344444454555444445788999999988889999999999999877664421                 1  1    1


Q ss_pred             hhhc--cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          270 EQIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       270 ~~~~--~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                      .+.+  +..|+|+.++|.+... -.++++++..++++|..
T Consensus       200 ~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~  239 (323)
T cd05282         200 KEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL  239 (323)
T ss_pred             HHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence            1122  3579999888865432 23567888888888854

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.11  E-value=0.15  Score=51.47  Aligned_cols=35  Identities=23%  Similarity=0.469  Sum_probs=30.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~  264 (368)
                      .|++++|+|||.|+. |.+++..|+..|. ++++++.
T Consensus        25 ~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD~   60 (355)
T PRK05597         25 SLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIIDD   60 (355)
T ss_pred             HHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence            468899999999996 9999999999996 7888864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=93.11  E-value=0.14  Score=47.13  Aligned_cols=36  Identities=22%  Similarity=0.250  Sum_probs=32.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||+++|.|+++-+|+.++..|+++|++|.+..++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~   36 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN   36 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence            578999999999999999999999999999887654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=93.05  E-value=0.14  Score=51.97  Aligned_cols=36  Identities=19%  Similarity=0.390  Sum_probs=31.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~  264 (368)
                      ..|++++|+|||.|++ |.+++..|...|. ++++++.
T Consensus        37 ~~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD~   73 (370)
T PRK05600         37 ERLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLIDD   73 (370)
T ss_pred             HHhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEeC
Confidence            3478899999999996 9999999999996 8999864

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=93.04  E-value=0.12  Score=52.05  Aligned_cols=70  Identities=23%  Similarity=0.310  Sum_probs=47.5

Q ss_pred             EEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------------CCHhhhccCCCEEEEecCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      |+|+|+ |.||+.++..|.+++-  +|++..++.                         .+|.+.++++|+||+++|...
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~   79 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF   79 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence            689999 5569999999998873  789987752                         136788999999999998641


Q ss_pred             c--ccCCCcCCCcEEEEeec
Q 017679          288 L--VRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       288 ~--I~~e~ik~gavVIDvg~  305 (368)
                      -  |-...++-|.-.||.++
T Consensus        80 ~~~v~~~~i~~g~~yvD~~~   99 (386)
T PF03435_consen   80 GEPVARACIEAGVHYVDTSY   99 (386)
T ss_dssp             HHHHHHHHHHHT-EEEESS-
T ss_pred             hHHHHHHHHHhCCCeeccch
Confidence            1  33344566778888544

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06198 short chain dehydrogenase; Provisional

Probab=93.02  E-value=0.11  Score=48.18  Aligned_cols=38  Identities=21%  Similarity=0.243  Sum_probs=33.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t  266 (368)
                      .+++|+++|+|+++-+|+.++..|.++|++ |+++.++.
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~   41 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNA   41 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCH
Confidence            368999999999988999999999999998 88887653

>PLN02778 3,5-epimerase/4-reductase

Probab=93.02  E-value=0.26  Score=47.95  Aligned_cols=55  Identities=20%  Similarity=0.159  Sum_probs=41.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---Hhhhcc--CCCEEEEecCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---PEQITS--EADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---L~~~~~--~ADIVIsAvG~  285 (368)
                      ..++|+|.|++|.+|..++..|.++|.+|+.....-.+   +...++  +.|+||.++|.
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~   67 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGV   67 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcc
Confidence            34789999999999999999999999998765433222   233333  68999977763

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.02  E-value=0.16  Score=47.29  Aligned_cols=34  Identities=24%  Similarity=0.326  Sum_probs=30.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~   34 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN   34 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999998889999999999999999998875

>PRK11303 DNA-binding transcriptional regulator FruR; Provisional

Probab=92.98  E-value=2.4  Score=40.65  Aligned_cols=93  Identities=15%  Similarity=0.282  Sum_probs=55.2

Q ss_pred             eeeecHH----HHHHHHHHHHHHHHHHH-------H--cCCCCCEEEEEEeC-CCcccHHHHHHHHHHHHHcCCeEEEEE
Q 017679           75 TVIDGKS----IAEEIRSGIDKEVRRMK-------K--SIGKVPGLAVILVG-ERRDSQTYVRNKIKACEEVGIKSIVTE  140 (368)
Q Consensus        75 ~ildGk~----ia~~i~~~i~~~v~~l~-------~--~~g~~P~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~~  140 (368)
                      ++|+|++    |+++-++.+.+.+++|-       .  +.++...+++|.-. +++--....+...+.|++.|.+..+..
T Consensus        19 rvLn~~~~~~~Vs~~tr~rV~~~a~elgY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~l~~gi~~~~~~~g~~~~~~~   98 (328)
T PRK11303         19 YVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLIIPDLENTSYARIAKYLERQARQRGYQLLIAC   98 (328)
T ss_pred             HHHcCCCCCCCcCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence            4678874    78877777777776651       0  01223345554422 223233344567788999999987654


Q ss_pred             cCCCCCHHHHHHHHHHhhhccCccEEEEeC
Q 017679          141 FADGCTEDEVLNALSNYNQDSSINGILVQL  170 (368)
Q Consensus       141 l~~~~~~~el~~~I~~LN~D~~V~GIlVql  170 (368)
                      ...  ..+...+.++.+.. .+++||++.-
T Consensus        99 ~~~--~~~~~~~~~~~l~~-~~vdgiIi~~  125 (328)
T PRK11303         99 SDD--QPDNEMRCAEHLLQ-RQVDALIVST  125 (328)
T ss_pred             CCC--CHHHHHHHHHHHHH-cCCCEEEEcC
Confidence            432  33334456666654 4799999953

>PRK12827 short chain dehydrogenase; Provisional

Probab=92.96  E-value=0.16  Score=46.53  Aligned_cols=36  Identities=17%  Similarity=0.268  Sum_probs=31.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ++++|+++|+|+++-+|+.++..|+++|++|++..+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~   38 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI   38 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence            367899999999999999999999999999888543

>PRK06197 short chain dehydrogenase; Provisional

Probab=92.95  E-value=0.087  Score=50.76  Aligned_cols=37  Identities=27%  Similarity=0.284  Sum_probs=33.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.|+|.|+++-+|+.++..|+++|++|+++.++
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~   49 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN   49 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999998888999999999999999888664

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=92.95  E-value=0.25  Score=49.27  Aligned_cols=53  Identities=28%  Similarity=0.376  Sum_probs=40.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-C-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-A-TVSIVHALT--------------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-A-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      +||+|||+|+ ||.++|++|..++ + ++.+.....                          .+ .+.++.||+||-+.|
T Consensus         1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence            5899999966 5999999998877 3 677776431                          12 577999999998888


Q ss_pred             CCC
Q 017679          285 VAN  287 (368)
Q Consensus       285 ~p~  287 (368)
                      .|.
T Consensus        79 ~pr   81 (313)
T COG0039          79 VPR   81 (313)
T ss_pred             CCC
Confidence            653

>PRK12937 short chain dehydrogenase; Provisional

Probab=92.94  E-value=0.16  Score=46.50  Aligned_cols=37  Identities=24%  Similarity=0.196  Sum_probs=32.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|+++-+|+.++..|.++|++|+++.+.
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~   38 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG   38 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence            4689999999998889999999999999998877553

>PRK08226 short chain dehydrogenase; Provisional

Probab=92.90  E-value=0.15  Score=47.46  Aligned_cols=36  Identities=22%  Similarity=0.379  Sum_probs=33.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||+++|.|.++-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~   39 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDIS   39 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence            678999999999999999999999999999988765

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=92.88  E-value=0.19  Score=47.98  Aligned_cols=52  Identities=17%  Similarity=0.224  Sum_probs=41.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAG  284 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG  284 (368)
                      ++++|+|+++.+|+.++..|.++|++|+++.++..                     ++.+.++.+|+||..++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            47999999888999999999999999998876421                     23455667899887665

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.86  E-value=0.22  Score=49.31  Aligned_cols=59  Identities=17%  Similarity=0.271  Sum_probs=46.6

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------------------CCHhhhc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------KNPEQIT  273 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------------------~~L~~~~  273 (368)
                      ..+++|+.|+|-|+|.-+||.+|..++++|+++.+...+.                                 +.+++..
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999776654331                                 1234566


Q ss_pred             cCCCEEEEecCC
Q 017679          274 SEADIVIAAAGV  285 (368)
Q Consensus       274 ~~ADIVIsAvG~  285 (368)
                      ..-||+|+.+|.
T Consensus       113 G~V~ILVNNAGI  124 (300)
T KOG1201|consen  113 GDVDILVNNAGI  124 (300)
T ss_pred             CCceEEEecccc
Confidence            778999988883

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=92.83  E-value=0.15  Score=47.80  Aligned_cols=37  Identities=16%  Similarity=0.031  Sum_probs=32.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +..+|+++|+|+++-+|+.++..|+++|++|+.+.|+
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~   50 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD   50 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC
Confidence            4678999999998888999999999999999876554

>PRK08263 short chain dehydrogenase; Provisional

Probab=92.82  E-value=0.2  Score=47.37  Aligned_cols=35  Identities=17%  Similarity=-0.009  Sum_probs=31.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+|.++|.|+++-+|+.++..|+++|+.|+++.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~   36 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARD   36 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999999999999999999999988765

>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]

Probab=92.79  E-value=0.14  Score=53.05  Aligned_cols=37  Identities=22%  Similarity=0.294  Sum_probs=34.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+|+|||+|.. |--++-.|.+.|++||+..|.
T Consensus       171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs  207 (443)
T COG2072         171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRS  207 (443)
T ss_pred             cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecC
Confidence            5799999999999998 999999999999999999875

>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional

Probab=92.78  E-value=0.17  Score=52.10  Aligned_cols=115  Identities=22%  Similarity=0.218  Sum_probs=64.9

Q ss_pred             EEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH
Q 017679          139 TEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG  218 (368)
Q Consensus       139 ~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g  218 (368)
                      ...|..+.-.+.+..|.+=|-+....=|.-..|||      .++..|-|... .+...++.+..  +  .+.-++|.-..
T Consensus        52 ~~cp~~~~~~~~~~~~~~~~~~~a~~~~~~~~p~~------~~~g~vc~~~~-~C~~~C~~~~~--~--~~v~i~~l~~~  120 (457)
T PRK11749         52 KACPVSIDIPEFIRLIAEGNLKGAAETILETNPLP------AVCGRVCPQER-LCEGACVRGKK--G--EPVAIGRLERY  120 (457)
T ss_pred             ccCCCcCCHHHHHHHHHCCCHHHHHHHHHHhCCch------hhhcCcCCCcc-CHHHHhcCCCC--C--CCcchHHHHHH
Confidence            34455555555555554443333333344456888      36777776331 11111222211  1  23334554444


Q ss_pred             HHHHHHHhCC------CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          219 CIELLIRSGV------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       219 v~~lL~~~~i------~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +.+.-..++.      .-.+|+|+|||+|-+ |..+|..|.++|.+|+++.+.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~VvIIGgGpa-Gl~aA~~l~~~g~~V~lie~~  172 (457)
T PRK11749        121 ITDWAMETGWVLFKRAPKTGKKVAVIGAGPA-GLTAAHRLARKGYDVTIFEAR  172 (457)
T ss_pred             HHHHHHhcCCCCCCCCccCCCcEEEECCCHH-HHHHHHHHHhCCCeEEEEccC
Confidence            4433222221      246899999998876 999999999999999998654

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=92.78  E-value=0.21  Score=38.88  Aligned_cols=32  Identities=25%  Similarity=0.332  Sum_probs=28.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +|+|||.|-+ |--+|..|.+.|.+||++++..
T Consensus         1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~   32 (80)
T PF00070_consen    1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD   32 (80)
T ss_dssp             EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred             CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence            6899998765 9999999999999999999875

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK06914 short chain dehydrogenase; Provisional

Probab=92.76  E-value=0.16  Score=47.96  Aligned_cols=36  Identities=31%  Similarity=0.204  Sum_probs=32.0

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++|.++|.|+++.+|+.++..|+++|++|+++.++.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~   37 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNP   37 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCH
Confidence            578999999999999999999999999998886653

>PRK09620 hypothetical protein; Provisional

Probab=92.75  E-value=0.26  Score=46.82  Aligned_cols=59  Identities=22%  Similarity=0.265  Sum_probs=44.0

Q ss_pred             CccceEEEEccC----------------ccchHHHHHHHhhCCCEEEEEeCCCC-------------------C----Hh
Q 017679          230 IMGKNAVVIGRS----------------NIVGLPTSLLLQRHHATVSIVHALTK-------------------N----PE  270 (368)
Q Consensus       230 l~GK~VvVIG~g----------------~~VGrpla~lL~~~gAtVti~h~~t~-------------------~----L~  270 (368)
                      ++||+|+|-+.+                |-+|..+|..|.++|++|++++....                   +    +.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~   80 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK   80 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHH
Confidence            479999998654                67899999999999999998875321                   1    12


Q ss_pred             hhc--cCCCEEEEecCCCCc
Q 017679          271 QIT--SEADIVIAAAGVANL  288 (368)
Q Consensus       271 ~~~--~~ADIVIsAvG~p~~  288 (368)
                      +.+  .++|+||-++..+.|
T Consensus        81 ~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         81 SIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHhcccCCCEEEECccccce
Confidence            334  358999988776665

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=92.75  E-value=0.15  Score=53.87  Aligned_cols=32  Identities=16%  Similarity=0.161  Sum_probs=29.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++|.|||.|.. |.++|..|++.|..|++.+++
T Consensus         6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~   37 (503)
T TIGR02279         6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR   37 (503)
T ss_pred             cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence            67999999865 999999999999999999865

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.72  E-value=0.17  Score=49.21  Aligned_cols=39  Identities=33%  Similarity=0.354  Sum_probs=35.0

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~   45 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA   45 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence            467899999999999989999999999999999888653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=92.72  E-value=0.15  Score=47.41  Aligned_cols=37  Identities=19%  Similarity=0.284  Sum_probs=33.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|+|.++-+|+.++..|.++|++|.++.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~   44 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN   44 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            3679999999999999999999999999998887654

>PRK08278 short chain dehydrogenase; Provisional

Probab=92.72  E-value=0.17  Score=48.03  Aligned_cols=37  Identities=27%  Similarity=0.384  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT   39 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            3689999999999999999999999999999988764

>PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=92.71  E-value=0.18  Score=56.01  Aligned_cols=122  Identities=19%  Similarity=0.140  Sum_probs=72.1

Q ss_pred             ceEEEEccCccchHHH-HHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCCCCC
Q 017679          233 KNAVVIGRSNIVGLPT-SLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCPVDV  310 (368)
Q Consensus       233 K~VvVIG~g~~VGrpl-a~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~~~~  310 (368)
                      +++.|||.|+. |+.. |.+|.++|++|+++..+.....+.++...|-+.. |..    .+.+. .+.+|+--|+++...
T Consensus         5 ~~i~viG~G~s-G~salA~~L~~~G~~V~~sD~~~~~~~~~L~~~gi~~~~-g~~----~~~~~~~d~vV~SpgI~~~~p   78 (809)
T PRK14573          5 LFYHFIGIGGI-GMSALAHILLDRGYSVSGSDLSEGKTVEKLKAKGARFFL-GHQ----EEHVPEDAVVVYSSSISKDNV   78 (809)
T ss_pred             ceEEEEEecHH-hHHHHHHHHHHCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHcCCCCEEEECCCcCCCCH
Confidence            57999999998 9998 9999999999999986543222334444443322 211    12221 245565555554320


Q ss_pred             CCCCCCCCCcEEEcccchhh-hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          311 SVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       311 ~~d~t~~~~~kl~GDVd~~~-~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      ....-...+-++.+++++-. ..+..-.| -|-|=-|.-|+..|+.++++.+
T Consensus        79 ~~~~a~~~gi~v~~~~el~~~~~~~~~~I-aITGTnGKTTTt~li~~iL~~~  129 (809)
T PRK14573         79 EYLSAKSRGNRLVHRAELLAELMQEQISI-LVSGSHGKTTVSSLITAIFQEA  129 (809)
T ss_pred             HHHHHHHCCCcEEeHHHHHHHHHcCCCEE-EEECCCCHHHHHHHHHHHHHhC
Confidence            00000011336888888732 21210112 4568888999999999998764

>PRK09135 pteridine reductase; Provisional

Probab=92.71  E-value=0.16  Score=46.39  Aligned_cols=36  Identities=19%  Similarity=0.138  Sum_probs=32.7

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++++++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~   39 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR   39 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            467899999999999999999999999999988764

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.71  E-value=0.18  Score=51.74  Aligned_cols=125  Identities=22%  Similarity=0.214  Sum_probs=69.4

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CHh---hhccCCCEEEEecCCCCc---ccCCCcCCCcEEEEeecC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPE---QITSEADIVIAAAGVANL---VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~---~~~~~ADIVIsAvG~p~~---I~~e~ik~gavVIDvg~n  306 (368)
                      +|+|||.|+. |+.+|.+|.++|++|+++.+... ...   +.+....+-+-. |....   ++..+-..+.+|+--|++
T Consensus         2 ~v~viG~G~s-G~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~-g~~~~~~~~~~~~~~~d~vv~s~gi~   79 (459)
T PRK02705          2 IAHVIGLGRS-GIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKL-GKPLELESFQPWLDQPDLVVVSPGIP   79 (459)
T ss_pred             eEEEEccCHH-HHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEE-CCccchhhhhHHhhcCCEEEECCCCC
Confidence            6899999998 99999999999999999986532 121   234343443321 22110   001111234566655555


Q ss_pred             CCCCCCCCCCCCCcEEEcccchhh-hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          307 PVDVSVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       307 ~~~~~~d~t~~~~~kl~GDVd~~~-~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      +..+....-.+.+-+++++.++.. .....-.| -|-|=.|.-|+.-|+.++++.+
T Consensus        80 ~~~~~~~~a~~~~i~v~~~~~~~~~~~~~~~~I-~VTGT~GKTTTt~ml~~iL~~~  134 (459)
T PRK02705         80 WDHPTLVELRERGIEVIGEIELAWRALKHIPWV-GITGTNGKTTVTALLAHILQAA  134 (459)
T ss_pred             CCCHHHHHHHHcCCcEEEhHHHHHHhhcCCCEE-EEeCCCchHHHHHHHHHHHHHc
Confidence            432000000011335677776532 11111112 4557788999999999988764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=92.68  E-value=0.19  Score=49.57  Aligned_cols=35  Identities=20%  Similarity=0.315  Sum_probs=31.0

Q ss_pred             CCCCccceEEEEcc---CccchHHHHHHHhhCCCEEEEE
Q 017679          227 GVEIMGKNAVVIGR---SNIVGLPTSLLLQRHHATVSIV  262 (368)
Q Consensus       227 ~i~l~GK~VvVIG~---g~~VGrpla~lL~~~gAtVti~  262 (368)
                      ..+++||.++|-|+   +++ |+.+|..|+++||+|.+.
T Consensus         4 ~~~l~gk~alITGa~~s~GI-G~a~A~~la~~Ga~Vv~~   41 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGY-GWAIAKALAAAGAEILVG   41 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcH-HHHHHHHHHHCCCEEEEE
Confidence            45689999999999   565 999999999999999883

>PRK10727 DNA-binding transcriptional regulator GalR; Provisional

Probab=92.67  E-value=4.2  Score=39.45  Aligned_cols=88  Identities=11%  Similarity=0.143  Sum_probs=52.3

Q ss_pred             eeeecHH-HHHHHHHHHHHHHHHHHHcCCCCC-------------EEEEEEeC-CCcccHHHHHHHHHHHHHcCCeEEEE
Q 017679           75 TVIDGKS-IAEEIRSGIDKEVRRMKKSIGKVP-------------GLAVILVG-ERRDSQTYVRNKIKACEEVGIKSIVT  139 (368)
Q Consensus        75 ~ildGk~-ia~~i~~~i~~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~  139 (368)
                      ++|+|+. |+++-++.+.+.+++|    |.+|             .+++|.-. .++--....+...+.|++.|......
T Consensus        20 rvLn~~~~Vs~~tr~rV~~~a~el----gY~pn~~ar~l~~~~~~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~   95 (343)
T PRK10727         20 RVINNSPKASEASRLAVHSAMESL----SYHPNANARALAQQSTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIG   95 (343)
T ss_pred             HHhCCCCCCCHHHHHHHHHHHHHH----CCCCCHHHHhhhhCCCCeEEEEeCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence            4677764 6666666666665554    4444             34444322 12222334556778899999887654


Q ss_pred             EcCCCCCHHHHHHHHHHhhhccCccEEEEe
Q 017679          140 EFADGCTEDEVLNALSNYNQDSSINGILVQ  169 (368)
Q Consensus       140 ~l~~~~~~~el~~~I~~LN~D~~V~GIlVq  169 (368)
                      ....  ++++..+.++.+.. .+++||++.
T Consensus        96 ~~~~--~~~~~~~~i~~l~~-~~vdgiIi~  122 (343)
T PRK10727         96 NGYH--NEQKERQAIEQLIR-HRCAALVVH  122 (343)
T ss_pred             eCCC--CHHHHHHHHHHHHh-cCCCEEEEe
Confidence            4332  33444566777654 479999997

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=92.66  E-value=0.31  Score=48.41  Aligned_cols=76  Identities=22%  Similarity=0.215  Sum_probs=52.2

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHhh----hcc-CCCEEEEecC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQ----ITS-EADIVIAAAG  284 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~~----~~~-~ADIVIsAvG  284 (368)
                      -.|++|+|.|.| .+|..+++++...|+ .|+++.+..                   .++.+    .+. .+|+||.++|
T Consensus       190 ~~g~~VlV~G~G-~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G  268 (371)
T cd08281         190 RPGQSVAVVGLG-GVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAG  268 (371)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence            368999999976 569999999999999 577664321                   12212    111 4799999998


Q ss_pred             CCCccc--CCCcCCCcEEEEeecC
Q 017679          285 VANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       285 ~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      .+..+.  -+.++++..++-+|..
T Consensus       269 ~~~~~~~~~~~l~~~G~iv~~G~~  292 (371)
T cd08281         269 SVPALETAYEITRRGGTTVTAGLP  292 (371)
T ss_pred             ChHHHHHHHHHHhcCCEEEEEccC
Confidence            765432  3467777777778754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.65  E-value=0.18  Score=46.39  Aligned_cols=35  Identities=23%  Similarity=0.237  Sum_probs=31.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +++|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~   37 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH   37 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence            57899999999988999999999999999987654

>PRK07677 short chain dehydrogenase; Provisional

Probab=92.62  E-value=0.16  Score=47.24  Aligned_cols=35  Identities=20%  Similarity=0.192  Sum_probs=31.5

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ||+++|.|.++-+|+.++..|+++|++|+++.++.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~   35 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTK   35 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            68999999999999999999999999999887653

>PRK06701 short chain dehydrogenase; Provisional

Probab=92.61  E-value=0.16  Score=48.90  Aligned_cols=38  Identities=24%  Similarity=0.360  Sum_probs=34.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|..++..|+++|++|+++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~   79 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD   79 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999989999999999999999988765

>PRK05993 short chain dehydrogenase; Provisional

Probab=92.61  E-value=0.15  Score=48.47  Aligned_cols=36  Identities=19%  Similarity=0.125  Sum_probs=32.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .||.++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~   38 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE   38 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            478999999988889999999999999999988753

>PRK07577 short chain dehydrogenase; Provisional

Probab=92.60  E-value=0.21  Score=45.51  Aligned_cols=36  Identities=22%  Similarity=0.230  Sum_probs=32.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~   37 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSA   37 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence            579999999999999999999999999999887753

>PRK07806 short chain dehydrogenase; Provisional

Probab=92.59  E-value=0.2  Score=46.16  Aligned_cols=36  Identities=31%  Similarity=0.333  Sum_probs=32.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~   39 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ   39 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            678999999998888999999999999999888664

>PRK10423 transcriptional repressor RbsR; Provisional

Probab=92.58  E-value=3.1  Score=39.78  Aligned_cols=88  Identities=17%  Similarity=0.362  Sum_probs=55.9

Q ss_pred             eeeecHH-HHHHHHHHHHHHHHHHHHcCCCCC-------------EEEEEEeC-CCcccHHHHHHHHHHHHHcCCeEEEE
Q 017679           75 TVIDGKS-IAEEIRSGIDKEVRRMKKSIGKVP-------------GLAVILVG-ERRDSQTYVRNKIKACEEVGIKSIVT  139 (368)
Q Consensus        75 ~ildGk~-ia~~i~~~i~~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~  139 (368)
                      ++|+|++ ++++.++.+.+.+++|    |.+|             .+++|.-. +++--..+.+...+.|++.|.+..+.
T Consensus        17 rvLn~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~   92 (327)
T PRK10423         17 HVINKDRFVSEAITAKVEAAIKEL----NYAPSALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLC   92 (327)
T ss_pred             HHhCCCCCCCHHHHHHHHHHHHHH----CCCccHHHHHHhhCCCCeEEEEeCCCCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence            4577664 6666666666655554    4444             45554422 23444566678889999999987765


Q ss_pred             EcCCCCCHHHHHHHHHHhhhccCccEEEEe
Q 017679          140 EFADGCTEDEVLNALSNYNQDSSINGILVQ  169 (368)
Q Consensus       140 ~l~~~~~~~el~~~I~~LN~D~~V~GIlVq  169 (368)
                      ....  +.++..+.++.+.+ .+++||++.
T Consensus        93 ~~~~--~~~~~~~~~~~l~~-~~vdGiI~~  119 (327)
T PRK10423         93 NTEG--DEQRMNRNLETLMQ-KRVDGLLLL  119 (327)
T ss_pred             eCCC--CHHHHHHHHHHHHH-cCCCEEEEe
Confidence            4332  44455577777755 479999996

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.58  E-value=0.22  Score=47.00  Aligned_cols=36  Identities=22%  Similarity=0.260  Sum_probs=30.9

Q ss_pred             CCccceEEEEccC--ccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g--~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +++||.++|.|++  .-+|+.++..|+++|++|+++.+
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r   41 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA   41 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence            5789999999985  33499999999999999998854

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=92.57  E-value=0.11  Score=47.96  Aligned_cols=37  Identities=24%  Similarity=0.315  Sum_probs=33.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|.++-+|..++..|+++|++|+++.++
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~   45 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT   45 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence            3689999999999999999999999999999888765

>PRK07201 short chain dehydrogenase; Provisional

Probab=92.52  E-value=0.18  Score=53.75  Aligned_cols=38  Identities=26%  Similarity=0.340  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~  405 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNG  405 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            57799999999988889999999999999999987753

>PLN00106 malate dehydrogenase

Probab=92.51  E-value=0.39  Score=48.00  Aligned_cols=57  Identities=26%  Similarity=0.362  Sum_probs=42.4

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC--EEEEEeC-----------------------CCCCHhhhccCCCEEEEecCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHA-----------------------LTKNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~-----------------------~t~~L~~~~~~ADIVIsAvG~  285 (368)
                      ..+||+|||+.|.||..++..|+.++.  ++.++..                       .+.++.+.+++||+||.+.|.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~   96 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV   96 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence            347999999944479999999986552  5665542                       123567889999999999996


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        97 ~~   98 (323)
T PLN00106         97 PR   98 (323)
T ss_pred             CC
Confidence            53

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=92.50  E-value=0.17  Score=53.41  Aligned_cols=72  Identities=17%  Similarity=0.203  Sum_probs=52.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------------------------CHhhhcc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------------------NPEQITS  274 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------------------------~L~~~~~  274 (368)
                      ++|.|||.|.. |.++|..|++.|..|++.+++..                                      ++ +.+.
T Consensus         8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~~~   85 (507)
T PRK08268          8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEAL-ADLA   85 (507)
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HHhC
Confidence            68999999865 99999999999999999976531                                      22 2357


Q ss_pred             CCCEEEEecCCCCcccCC-------CcCCCcEE-EEeecC
Q 017679          275 EADIVIAAAGVANLVRGS-------WLKPGAVV-LDVGTC  306 (368)
Q Consensus       275 ~ADIVIsAvG~p~~I~~e-------~ik~gavV-IDvg~n  306 (368)
                      +||+||.++....-++..       ..++++++ .|.++-
T Consensus        86 ~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl  125 (507)
T PRK08268         86 DCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSL  125 (507)
T ss_pred             CCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence            999999998754323322       34677776 366543

>PRK07109 short chain dehydrogenase; Provisional

Probab=92.48  E-value=0.12  Score=51.16  Aligned_cols=37  Identities=27%  Similarity=0.231  Sum_probs=33.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++|.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~   41 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG   41 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4688999999998889999999999999999998875

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=92.48  E-value=0.3  Score=48.25  Aligned_cols=94  Identities=22%  Similarity=0.186  Sum_probs=59.3

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC-------------------CCHh-
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT-------------------KNPE-  270 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t-------------------~~L~-  270 (368)
                      ++|.....+..+....---.|++|+|.|.| .+|..++.++...|++ |+.+.+..                   .+.. 
T Consensus       157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g-~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~  235 (358)
T TIGR03451       157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCG-GVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVE  235 (358)
T ss_pred             hcccchhhHHHHHhccCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHH
Confidence            344433334333322222369999999975 5699999999999985 76664321                   1221 


Q ss_pred             ---hhc--cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679          271 ---QIT--SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ---~~~--~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                         +.+  ..+|+||.++|.+..+.  -+.+++|-.++-+|..
T Consensus       236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~  278 (358)
T TIGR03451       236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVP  278 (358)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCC
Confidence               222  24799999999765432  2467888888888864

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02602 lactate dehydrogenase

Probab=92.43  E-value=0.32  Score=49.14  Aligned_cols=52  Identities=21%  Similarity=0.393  Sum_probs=40.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      +||.|||+|. ||..+|..|+..+.  ++.++....                         .+ .+.+++|||||.+.|.
T Consensus        38 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d-y~~~~daDiVVitAG~  115 (350)
T PLN02602         38 TKVSVVGVGN-VGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD-YAVTAGSDLCIVTAGA  115 (350)
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC-HHHhCCCCEEEECCCC
Confidence            6999999976 59999999988873  577776432                         12 2458999999999997


Q ss_pred             C
Q 017679          286 A  286 (368)
Q Consensus       286 p  286 (368)
                      |
T Consensus       116 ~  116 (350)
T PLN02602        116 R  116 (350)
T ss_pred             C
Confidence            5

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=92.42  E-value=0.27  Score=48.31  Aligned_cols=51  Identities=25%  Similarity=0.390  Sum_probs=40.6

Q ss_pred             EEEEccCccchHHHHHHHhhCC--CEEEEEeCCC-------------------------CCHhhhccCCCEEEEecCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT-------------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      +.|||+|. ||.+++..|+..|  .++++++.+.                         .+ .+.+++|||||.++|.|.
T Consensus         1 i~iiGaG~-VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIGAGN-VGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR   78 (300)
T ss_pred             CEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence            47999987 6999999999888  4788887532                         12 467899999999999753

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=92.37  E-value=0.28  Score=46.97  Aligned_cols=88  Identities=19%  Similarity=0.129  Sum_probs=57.6

Q ss_pred             HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------CH-hh----hc-cC
Q 017679          219 CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NP-EQ----IT-SE  275 (368)
Q Consensus       219 v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------~L-~~----~~-~~  275 (368)
                      .+..+.+.++.-.|.+|+|.|.++.+|..++.++...|++|+++.+...                 +. .+    .. ..
T Consensus       134 ~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  213 (326)
T cd08289         134 SIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQR  213 (326)
T ss_pred             HHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCC
Confidence            3443444444445789999999777899999999999998876654321                 10 11    11 34


Q ss_pred             CCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          276 ADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       276 ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                      .|+|+.++|...+- --..++++..+|++|..
T Consensus       214 ~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~  245 (326)
T cd08289         214 WAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLT  245 (326)
T ss_pred             cCEEEECCcHHHHHHHHHHhhcCCEEEEEeec
Confidence            78888888864321 12346778888999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.36  E-value=0.32  Score=49.67  Aligned_cols=103  Identities=17%  Similarity=0.249  Sum_probs=65.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHh--------------hhccCCCEEEEecCCCCcccCCC---
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPE--------------QITSEADIVIAAAGVANLVRGSW---  293 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~--------------~~~~~ADIVIsAvG~p~~I~~e~---  293 (368)
                      ..++|+|||-|.+ |..+|++|.++|++|+.+..+...+.              ....++|++|...|.+..  .++   
T Consensus         2 ~~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~~~--~~~l~~   78 (418)
T PRK00683          2 GLQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIKKE--HPWVQA   78 (418)
T ss_pred             CCCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCCCC--cHHHHH
Confidence            3578999999997 99999999999999999886543211              113557877777665421  111   


Q ss_pred             -cCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhh-----ccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          294 -LKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAM-----RLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       294 -ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~-----~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                       .+.|+                      +++.|.++.-..     ...-   -|-|-.|.-|+.-|+.++++.+
T Consensus        79 A~~~g~----------------------~vv~~~~~~~~~~~~~~~~~I---~ITGT~GKTTTt~ml~~iL~~~  127 (418)
T PRK00683         79 AIASHI----------------------PVVTDIQLAFQTPEFTRYPSL---GITGSTGKTTTILFLEHLLKRL  127 (418)
T ss_pred             HHHCCC----------------------cEEEHHHHHHhhhhcCCCCEE---EEECCCChHHHHHHHHHHHHHc
Confidence             12332                      234444331110     0112   3458889999999999998764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.35  E-value=0.17  Score=48.10  Aligned_cols=36  Identities=17%  Similarity=0.264  Sum_probs=30.8

Q ss_pred             CccceEEEEccCc--cchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~--~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||.++|.|+|.  -+|+.++..|+++|++|.++.+.
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~   41 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN   41 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence            6899999999862  34999999999999999887654

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=92.34  E-value=0.29  Score=48.45  Aligned_cols=53  Identities=21%  Similarity=0.245  Sum_probs=40.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------C------CHhhhccCCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------K------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------~------~L~~~~~~ADIVIsAvG~p  286 (368)
                      ||.|||+|. ||.++|..|+.++.  ++.+++...                   .      .-.+.+++|||||.++|.|
T Consensus         1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~   79 (307)
T cd05290           1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS   79 (307)
T ss_pred             CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence            589999976 59999999988773  577775431                   0      1247789999999999975


Q ss_pred             C
Q 017679          287 N  287 (368)
Q Consensus       287 ~  287 (368)
                      .
T Consensus        80 ~   80 (307)
T cd05290          80 I   80 (307)
T ss_pred             C
Confidence            3

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08267 short chain dehydrogenase; Provisional

Probab=92.29  E-value=0.16  Score=47.29  Aligned_cols=34  Identities=21%  Similarity=0.233  Sum_probs=30.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |+++|+|+++-+|+.++..|+++|++|.++.++.
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~   35 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINE   35 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence            7899999999999999999999999999987643

>TIGR01082 murC UDP-N-acetylmuramate--alanine ligase

Probab=92.28  E-value=0.22  Score=51.29  Aligned_cols=121  Identities=19%  Similarity=0.183  Sum_probs=67.3

Q ss_pred             eEEEEccCccchHH-HHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCCCCCC
Q 017679          234 NAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCPVDVS  311 (368)
Q Consensus       234 ~VvVIG~g~~VGrp-la~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~~~~~  311 (368)
                      ++.+||.|++ |+. +|.+|.++|++|+++..+.....+.+++..+-+. .|.    +.+.+. ...+|+--|+++..+.
T Consensus         1 ~~~~iGiggs-Gm~~la~~L~~~G~~v~~~D~~~~~~~~~l~~~gi~~~-~g~----~~~~~~~~d~vV~spgi~~~~p~   74 (448)
T TIGR01082         1 KIHFVGIGGI-GMSGIAEILLNRGYQVSGSDIAENATTKRLEALGIPIY-IGH----SAENLDDADVVVVSAAIKDDNPE   74 (448)
T ss_pred             CEEEEEECHH-HHHHHHHHHHHCCCeEEEECCCcchHHHHHHHCcCEEe-CCC----CHHHCCCCCEEEECCCCCCCCHH
Confidence            3789999998 997 9999999999999998654222222333232221 111    111121 2345555555442100


Q ss_pred             CCCCCCCCcEEEcccchh-hhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          312 VDPSCEYGYRLMGDVCYE-EAMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       312 ~d~t~~~~~kl~GDVd~~-~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      ...-.+.+-.++++.++- ...+.. .+--|-|=-|.-|+..|+.++++.+
T Consensus        75 ~~~a~~~~i~v~~~~el~~~~~~~~-~~IaITGTnGKTTTt~ll~~iL~~~  124 (448)
T TIGR01082        75 IVEAKERGIPVIRRAEMLAELMRFR-HSIAVAGTHGKTTTTAMIAVILKEA  124 (448)
T ss_pred             HHHHHHcCCceEeHHHHHHHHHhcC-cEEEEECCCChHHHHHHHHHHHHHc
Confidence            000001133578888763 221111 1224557788999999999998765

UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by TIGR01081.

>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase

Probab=92.27  E-value=0.34  Score=49.37  Aligned_cols=121  Identities=20%  Similarity=0.252  Sum_probs=70.0

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CHh---hhcc-CCCEEEEecCCCCcccCCCcC-CCcEEEEeecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPE---QITS-EADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCP  307 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~---~~~~-~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~  307 (368)
                      ++.|||-|+. |+++|.+|.++|++|+++..... ...   ..++ ...|.+. .|..    .+.+. ...+|+--|+++
T Consensus         1 ~~~~iG~G~~-G~a~a~~l~~~G~~V~~sD~~~~~~~~~~~~~~~~~~gi~~~-~g~~----~~~~~~~d~vv~sp~i~~   74 (433)
T TIGR01087         1 KILILGLGKT-GRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLH-TGLH----LEDLNNADLVVKSPGIPP   74 (433)
T ss_pred             CEEEEEeCHh-HHHHHHHHHHCCCEEEEEeCCCCccchhHHHHHhhccCcEEE-ecCc----hHHhccCCEEEECCCCCC
Confidence            4789999998 99999999999999999986542 121   1222 1244332 2211    11221 245676666665


Q ss_pred             CCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          308 VDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       308 ~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      .......-.+.+-++.++.++-...-.. .+--|-|--|.-|+..|+.++++.+
T Consensus        75 ~~p~~~~a~~~~i~i~~~~e~~~~~~~~-~~I~VTGT~GKTTTt~li~~iL~~~  127 (433)
T TIGR01087        75 DHPLVQAAAKRGIPVVGDIELFLRLVPL-PVVAITGTNGKTTTTSLLYHLLKAA  127 (433)
T ss_pred             CCHHHHHHHHCCCcEEEHHHHHHhhcCC-CEEEEECCCCHHHHHHHHHHHHHhc
Confidence            3200000001133577777762211111 1124568889999999999999765

>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]

Probab=92.25  E-value=0.27  Score=48.94  Aligned_cols=78  Identities=23%  Similarity=0.222  Sum_probs=57.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC---CCccc--
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV---ANLVR--  290 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~---p~~I~--  290 (368)
                      |+||+|+|||.|.- |++=|..|...|.+|+|--+..              .+..+.+++||+|..-++-   +....  
T Consensus        16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~   94 (338)
T COG0059          16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE   94 (338)
T ss_pred             hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence            68999999999986 9999999999999999987653              2567899999999998862   22222  


Q ss_pred             -CCCcCCCc-EEEEeecCCC
Q 017679          291 -GSWLKPGA-VVLDVGTCPV  308 (368)
Q Consensus       291 -~e~ik~ga-vVIDvg~n~~  308 (368)
                       ...+++|+ +.+-=|+|..
T Consensus        95 I~p~Lk~G~aL~FaHGfNih  114 (338)
T COG0059          95 IAPNLKEGAALGFAHGFNIH  114 (338)
T ss_pred             hhhhhcCCceEEecccccee
Confidence             12345554 4444455543

>PRK07985 oxidoreductase; Provisional

Probab=92.24  E-value=0.21  Score=48.27  Aligned_cols=36  Identities=22%  Similarity=0.335  Sum_probs=32.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~   81 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL   81 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence            589999999999988999999999999999988754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=92.21  E-value=0.28  Score=46.04  Aligned_cols=52  Identities=21%  Similarity=0.298  Sum_probs=41.8

Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC----------------HhhhccCCCEEEEecCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN----------------PEQITSEADIVIAAAGVA  286 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~----------------L~~~~~~ADIVIsAvG~p  286 (368)
                      |+|.|++|.+|..++..|+++|.+|+...|....                +.+.+...|+||..+|.+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~   68 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEP   68 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCC
Confidence            5899999999999999999999999998875321                224567799999888754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=92.20  E-value=0.3  Score=44.20  Aligned_cols=31  Identities=19%  Similarity=0.314  Sum_probs=26.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      +|+|||.|++ |..++..|.+.|. ++++++..
T Consensus         1 ~VlViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D   32 (174)
T cd01487           1 KVGIAGAGGL-GSNIAVLLARSGVGNLKLVDFD   32 (174)
T ss_pred             CEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence            5899999886 9999999999997 68888643

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12744 short chain dehydrogenase; Provisional

Probab=92.20  E-value=0.19  Score=46.83  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=30.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|.+++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~   39 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIH   39 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEe
Confidence            46899999999999999999999999999865554

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=92.18  E-value=0.36  Score=47.98  Aligned_cols=77  Identities=21%  Similarity=0.282  Sum_probs=58.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCcc-----
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANLV-----  289 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I-----  289 (368)
                      +-+-+++=-||-|.. |.+++..|.+.|.+||+.+++-              ....|..+++|+||+.++.|.-+     
T Consensus        32 ~~s~~~iGFIGLG~M-G~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v~~v~~  110 (327)
T KOG0409|consen   32 TPSKTRIGFIGLGNM-GSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKDVKDVLL  110 (327)
T ss_pred             CcccceeeEEeeccc-hHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhhHHHhc
Confidence            345788999999986 9999999999999999999873              23568899999999999977532     


Q ss_pred             cCC----CcCCCcEE-EEeecC
Q 017679          290 RGS----WLKPGAVV-LDVGTC  306 (368)
Q Consensus       290 ~~e----~ik~gavV-IDvg~n  306 (368)
                      ...    -+++|... ||..+-
T Consensus       111 g~~Gvl~g~~~g~~~~vDmSTi  132 (327)
T KOG0409|consen  111 GKSGVLSGIRPGKKATVDMSTI  132 (327)
T ss_pred             CCCcceeeccCCCceEEecccc
Confidence            221    23455544 787653

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=92.18  E-value=0.71  Score=47.48  Aligned_cols=75  Identities=11%  Similarity=0.128  Sum_probs=55.1

Q ss_pred             CCCCccceEEEEccC---------ccchHHHHHHHhhCC-CEEEEEeCC-------------CCCHhhhccCCCEEEEec
Q 017679          227 GVEIMGKNAVVIGRS---------NIVGLPTSLLLQRHH-ATVSIVHAL-------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g---------~~VGrpla~lL~~~g-AtVti~h~~-------------t~~L~~~~~~ADIVIsAv  283 (368)
                      +.+++||+|.|+|-+         +.-...++..|.++| +.|.+..-.             ..++.+.++.||+||..|
T Consensus       315 ~~~~~~~~v~vlGlafK~~t~d~r~Sp~~~l~~~L~~~gg~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t  394 (415)
T PRK11064        315 DKRASEVKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLDGLVTLVSLDEALATADVLVMLV  394 (415)
T ss_pred             ccCcCCCEEEEEeeEECCCCcchhhChHHHHHHHHHhcCCcEEEEECCCCCchhhhccCceeeCCHHHHHhCCCEEEECC
Confidence            567899999999932         223778999999996 999886432             135778889999999999


Q ss_pred             CCCCcccCC--CcCCCcEEEE
Q 017679          284 GVANLVRGS--WLKPGAVVLD  302 (368)
Q Consensus       284 G~p~~I~~e--~ik~gavVID  302 (368)
                      ..+.|-..+  -++. .+|||
T Consensus       395 ~~~~~~~~~~~~~~~-~~v~D  414 (415)
T PRK11064        395 DHSQFKAINGDNVHQ-QWVVD  414 (415)
T ss_pred             CCHHhccCCHHHhCC-CEEEe
Confidence            988773333  2443 37777

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=92.17  E-value=0.37  Score=47.56  Aligned_cols=54  Identities=30%  Similarity=0.445  Sum_probs=41.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC----------------------------CCHhhhccCCCEEEEe
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------------------KNPEQITSEADIVIAA  282 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t----------------------------~~L~~~~~~ADIVIsA  282 (368)
                      .+|.|+|+++.||..++..|+..|.  +|+.+.+..                            .+ .+.+++|||||.+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence            4799999866679999999998874  577776521                            12 2458999999999


Q ss_pred             cCCCC
Q 017679          283 AGVAN  287 (368)
Q Consensus       283 vG~p~  287 (368)
                      +|.|.
T Consensus        80 ag~p~   84 (309)
T cd05294          80 AGVPR   84 (309)
T ss_pred             cCCCC
Confidence            99764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=92.15  E-value=0.22  Score=56.90  Aligned_cols=88  Identities=14%  Similarity=0.147  Sum_probs=52.6

Q ss_pred             HhhhccCCCEEEEecC----CCCcccCC-C---cCCCc----EEEEeecCCC---CCCCCCCCCCCcEEE----------
Q 017679          269 PEQITSEADIVIAAAG----VANLVRGS-W---LKPGA----VVLDVGTCPV---DVSVDPSCEYGYRLM----------  323 (368)
Q Consensus       269 L~~~~~~ADIVIsAvG----~p~~I~~e-~---ik~ga----vVIDvg~n~~---~~~~d~t~~~~~kl~----------  323 (368)
                      +++++..||++|+++-    .|.+|+.+ |   +|+|.    +|+||.+...   +++..+|+..+ .+.          
T Consensus       291 ~~~~~~~advlIn~i~~~~~~P~lvt~~~~~~~mk~G~~~l~vI~DVs~D~gG~ie~~~~~Tt~~~-P~~~~~~~~~~~~  369 (1042)
T PLN02819        291 HEKIAPYASVIVNCMYWEKRFPRLLTTKQLQDLTRKGGCPLVGVCDITCDIGGSIEFLNKTTSIEK-PFFRYNPSNNSYH  369 (1042)
T ss_pred             HHHhHhhCCEEEeeeecCCCCCceeCHHHHHHhhcCCCccceEEEEEccCCCCCeeecccCCCCcC-CeEeecccccccc
Confidence            4568899999999983    57789888 3   46787    9999997653   21111222111 121          


Q ss_pred             cccchhhhhccceEeccCCCcccHHHHHHHHHHHHHH
Q 017679          324 GDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS  360 (368)
Q Consensus       324 GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a  360 (368)
                      .+++.+.+  ..-++.-.|+-+ |.|...-+.|.+--
T Consensus       370 ~~~~~~gv--~~~~VdNlP~~l-Pr~AS~~f~n~llp  403 (1042)
T PLN02819        370 DDMDGDGI--LCMAVDILPTEF-AKEASQHFGNILSP  403 (1042)
T ss_pred             cccCCCCe--EEEEECCccccC-HHHHHHHHHHHHHH
Confidence            11111111  133455677766 88888888876643

>PRK05086 malate dehydrogenase; Provisional

Probab=92.11  E-value=0.39  Score=47.58  Aligned_cols=55  Identities=27%  Similarity=0.432  Sum_probs=39.6

Q ss_pred             ceEEEEccCccchHHHHHHHhh-CC--CEEEEEeCC-----------------------CCCHhhhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQR-HH--ATVSIVHAL-----------------------TKNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~-~g--AtVti~h~~-----------------------t~~L~~~~~~ADIVIsAvG~p  286 (368)
                      +|++|||+++.||..++..|.. .+  ..++++.+.                       ..++.+.++++|+||.+.|.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~   80 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA   80 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence            5899999966679999988844 33  356665421                       124457788999999999975


Q ss_pred             C
Q 017679          287 N  287 (368)
Q Consensus       287 ~  287 (368)
                      +
T Consensus        81 ~   81 (312)
T PRK05086         81 R   81 (312)
T ss_pred             C
Confidence            4

>PLN02206 UDP-glucuronate decarboxylase

Probab=92.10  E-value=0.34  Score=50.20  Aligned_cols=37  Identities=24%  Similarity=0.251  Sum_probs=32.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ..-++++|+|.|++|.||+.++..|+++|.+|.++.+
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~  151 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN  151 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence            4457899999999999999999999999999988754

>PRK08303 short chain dehydrogenase; Provisional

Probab=92.09  E-value=0.23  Score=48.51  Aligned_cols=38  Identities=26%  Similarity=0.218  Sum_probs=33.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|++.-+|+.++..|+++|++|.++.++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            35789999999998778999999999999999998765

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=92.08  E-value=0.32  Score=49.46  Aligned_cols=71  Identities=20%  Similarity=0.216  Sum_probs=51.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-------CEEEEEeCC---------------------------------CCCHhhh
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHAL---------------------------------TKNPEQI  272 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-------AtVti~h~~---------------------------------t~~L~~~  272 (368)
                      .+|+|||+|.. |.++|..|.+.|       .+|++..++                                 +.++.+.
T Consensus        12 ~ki~ViGaG~w-GtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~ea   90 (365)
T PTZ00345         12 LKVSVIGSGNW-GSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKEA   90 (365)
T ss_pred             CeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHHH
Confidence            58999999887 999999999886       578876433                                 2356788


Q ss_pred             ccCCCEEEEecCCCCc------ccCC-CcCCCcEEEEee
Q 017679          273 TSEADIVIAAAGVANL------VRGS-WLKPGAVVLDVG  304 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~------I~~e-~ik~gavVIDvg  304 (368)
                      +++||+||.|++...+      +.+- .+++++++|-+.
T Consensus        91 v~~aDiIvlAVPsq~l~~vl~~l~~~~~l~~~~~iIS~a  129 (365)
T PTZ00345         91 VEDADLLIFVIPHQFLESVLSQIKENNNLKKHARAISLT  129 (365)
T ss_pred             HhcCCEEEEEcChHHHHHHHHHhccccccCCCCEEEEEe
Confidence            9999999999975332      2321 456666666553

>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional

Probab=92.05  E-value=0.24  Score=56.15  Aligned_cols=35  Identities=23%  Similarity=0.318  Sum_probs=32.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -.||+|+|||+|-+ |..+|..|.++|..|||..+.
T Consensus       304 ~~gkkVaVIGsGPA-GLsaA~~Lar~G~~VtVfE~~  338 (944)
T PRK12779        304 AVKPPIAVVGSGPS-GLINAYLLAVEGFPVTVFEAF  338 (944)
T ss_pred             CCCCeEEEECCCHH-HHHHHHHHHHCCCeEEEEeeC
Confidence            46999999999998 999999999999999999754

>PRK06180 short chain dehydrogenase; Provisional

Probab=92.04  E-value=0.18  Score=47.79  Aligned_cols=35  Identities=14%  Similarity=-0.082  Sum_probs=31.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   37 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS   37 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC
Confidence            47899999999989999999999999999998875

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=92.04  E-value=0.32  Score=46.17  Aligned_cols=52  Identities=19%  Similarity=0.189  Sum_probs=41.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC---CEEEEEeCCC---------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALT---------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g---AtVti~h~~t---------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      .++.|||.|.+ |..++..|.+.|   ..|+++.++.               .+..+.+.++|+||.++..
T Consensus         3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~   72 (267)
T PRK11880          3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP   72 (267)
T ss_pred             CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence            47999999876 999999999888   6788887752               2344567899999998853

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=92.03  E-value=0.25  Score=48.24  Aligned_cols=36  Identities=17%  Similarity=0.045  Sum_probs=32.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +++||+|+|.|+++.+|+.++..|+++|++|+++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r   38 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIR   38 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEec
Confidence            578999999999999999999999999999987644

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=92.00  E-value=0.51  Score=45.59  Aligned_cols=94  Identities=15%  Similarity=0.117  Sum_probs=60.3

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------------
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------  267 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------------  267 (368)
                      ||........+.....--.|++|+|.|.++.+|..++.++...|++|++..+...                         
T Consensus       128 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  207 (341)
T cd08290         128 SVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRS  207 (341)
T ss_pred             hccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCccccc
Confidence            4444444444444333346899999998777899999999999998766554321                         


Q ss_pred             -CHhhhcc-----CCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          268 -NPEQITS-----EADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       268 -~L~~~~~-----~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                       +..+.++     ..|+|+.++|...+. -.+.++++..++++|..
T Consensus       208 ~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (341)
T cd08290         208 LLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGM  253 (341)
T ss_pred             ccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEecc
Confidence             1111111     368888888865432 23456788888888853

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK06128 oxidoreductase; Provisional

Probab=92.00  E-value=0.24  Score=47.78  Aligned_cols=36  Identities=19%  Similarity=0.410  Sum_probs=32.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~   87 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYL   87 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence            478999999999888999999999999999987653

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=91.98  E-value=0.22  Score=49.83  Aligned_cols=75  Identities=20%  Similarity=0.189  Sum_probs=50.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhC-CCEEEE-EeCCCC--C-------H-----------hh-hccCCCEEEEecCCCC--
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH-HATVSI-VHALTK--N-------P-----------EQ-ITSEADIVIAAAGVAN--  287 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~-gAtVti-~h~~t~--~-------L-----------~~-~~~~ADIVIsAvG~p~--  287 (368)
                      ++|.|||++|.+|+-++.+|.++ +++++. +.+...  .       +           .+ ...++|+|+.|++...  
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~vD~Vf~alP~~~~~   82 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPEILAGADVVFLALPHGVSM   82 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHHHhcCCCEEEECCCcHHHH
Confidence            58999999888899999999876 567544 432210  0       1           11 3357899999987422  


Q ss_pred             cccCCCcCCCcEEEEeecCC
Q 017679          288 LVRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 ~I~~e~ik~gavVIDvg~n~  307 (368)
                      -+-....+.|..|||.+...
T Consensus        83 ~~v~~a~~aG~~VID~S~~f  102 (343)
T PRK00436         83 DLAPQLLEAGVKVIDLSADF  102 (343)
T ss_pred             HHHHHHHhCCCEEEECCccc
Confidence            13334556799999998654

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=91.97  E-value=0.34  Score=49.32  Aligned_cols=76  Identities=17%  Similarity=0.184  Sum_probs=51.9

Q ss_pred             ceEEEEccCccchHHHHHHHh-hCCC---EEEEEeCC-C--------------CCHhh--hccCCCEEEEecCCC--Ccc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQ-RHHA---TVSIVHAL-T--------------KNPEQ--ITSEADIVIAAAGVA--NLV  289 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~-~~gA---tVti~h~~-t--------------~~L~~--~~~~ADIVIsAvG~p--~~I  289 (368)
                      |+|.|||+.|.||+-+..+|. +++.   ++....+. .              .++.+  ..++.||++.++|.-  .-+
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~~~v~~~~~~~~~~~vDivffa~g~~~s~~~   80 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDIDALKALDIIITCQGGDYTNEI   80 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCcceEEcCcccccccCCCEEEEcCCHHHHHHH
Confidence            579999999999999999888 5443   33333331 0              12322  467899999999753  123


Q ss_pred             cCCCcCCC--cEEEEeecCCC
Q 017679          290 RGSWLKPG--AVVLDVGTCPV  308 (368)
Q Consensus       290 ~~e~ik~g--avVIDvg~n~~  308 (368)
                      -+...+.|  ++|||-.....
T Consensus        81 ~p~~~~aG~~~~VIDnSSa~R  101 (366)
T TIGR01745        81 YPKLRESGWQGYWIDAASSLR  101 (366)
T ss_pred             HHHHHhCCCCeEEEECChhhh
Confidence            34455779  89999987653

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=91.96  E-value=0.26  Score=48.42  Aligned_cols=36  Identities=28%  Similarity=0.159  Sum_probs=32.3

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||+++|.|+++.+|+.++..|+++|++|+++.++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~   37 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD   37 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence            478999999998888999999999999999988654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07831 short chain dehydrogenase; Provisional

Probab=91.95  E-value=0.23  Score=46.35  Aligned_cols=38  Identities=21%  Similarity=0.155  Sum_probs=31.5

Q ss_pred             CCccceEEEEccCc-cchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSN-IVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~-~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .++||+++|.|+++ -+|+.++..|+++|++|+++.++.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~   52 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHE   52 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCH
Confidence            35789999999853 359999999999999999886643

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=91.94  E-value=0.12  Score=58.91  Aligned_cols=115  Identities=17%  Similarity=0.215  Sum_probs=73.3

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCC-CE-------------EEEEeCCC-----------------------CCHhhh
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHH-AT-------------VSIVHALT-----------------------KNPEQI  272 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~g-At-------------Vti~h~~t-----------------------~~L~~~  272 (368)
                      .+.|+|+|||+|.+ |++.+..|++.. +.             |+++....                       .++.+.
T Consensus       567 ~~~~rIlVLGAG~V-G~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~  645 (1042)
T PLN02819        567 KKSQNVLILGAGRV-CRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY  645 (1042)
T ss_pred             ccCCcEEEECCCHH-HHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence            35789999999885 999999998753 34             88886431                       124455


Q ss_pred             ccCCCEEEEecCCC-Cc-ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCC-cccHHH
Q 017679          273 TSEADIVIAAAGVA-NL-VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMT  349 (368)
Q Consensus       273 ~~~ADIVIsAvG~p-~~-I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPG-GVGp~T  349 (368)
                      ++++|+||++++.. |. +-...++-|.-++|..+...+     .    ..+.     +.+ +.++. +=+++ |.-|--
T Consensus       646 v~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e-----~----~~L~-----e~A-k~AGV-~~m~e~GlDPGi  709 (1042)
T PLN02819        646 VSQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEE-----M----SALD-----SKA-KEAGI-TILCEMGLDPGI  709 (1042)
T ss_pred             hcCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHH-----H----HHHH-----HHH-HHcCC-EEEECCccCHHH
Confidence            57899999999853 22 455667778778887643211     0    0111     333 34442 12222 467878


Q ss_pred             HHHHHHHHHHHH
Q 017679          350 VAMLLSNTLDSA  361 (368)
Q Consensus       350 ~amLl~N~v~a~  361 (368)
                      ..|+..++++..
T Consensus       710 d~~lA~~~Id~~  721 (1042)
T PLN02819        710 DHMMAMKMIDDA  721 (1042)
T ss_pred             HHHHHHHHHHhh
Confidence            888888888765

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=91.93  E-value=0.93  Score=46.88  Aligned_cols=78  Identities=19%  Similarity=0.299  Sum_probs=54.9

Q ss_pred             hCCCCccceEEEEccC---------ccchHHHHHHHhhCCCEEEEEeCCCC--------C---Hhh-hccCCCEEEEecC
Q 017679          226 SGVEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALTK--------N---PEQ-ITSEADIVIAAAG  284 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g---------~~VGrpla~lL~~~gAtVti~h~~t~--------~---L~~-~~~~ADIVIsAvG  284 (368)
                      ++.+++|++|.|+|-+         +.-+..++..|.++|++|.+..-.-.        .   +.. .++.||+||..|.
T Consensus       308 ~~~~~~~~~V~vlGlafK~~t~D~R~Spa~~ii~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~  387 (425)
T PRK15182        308 KGINVEGSSVLILGFTFKENCPDIRNTRIIDVVKELGKYSCKVDIFDPWVDAEEVRREYGIIPVSEVKSSHYDAIIVAVG  387 (425)
T ss_pred             cCCCCCCCEEEEEEeEeCCCCCccccCcHHHHHHHHHhCCCEEEEECCCCChhHHHHhcCcccchhhhhcCCCEEEEccC
Confidence            3567899999999932         23488999999999999998865410        0   112 3578999999999


Q ss_pred             CCCc--ccCCCc----CCCcEEEEe
Q 017679          285 VANL--VRGSWL----KPGAVVLDV  303 (368)
Q Consensus       285 ~p~~--I~~e~i----k~gavVIDv  303 (368)
                      .+.|  ++.+++    +...+|||.
T Consensus       388 h~~f~~~~~~~~~~~~~~~~~iiD~  412 (425)
T PRK15182        388 HQQFKQMGSEDIRGFGKDKHVLYDL  412 (425)
T ss_pred             CHHhhcCCHHHHHHhcCCCCEEEEC
Confidence            8887  333333    323588993

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=91.92  E-value=0.36  Score=46.26  Aligned_cols=94  Identities=17%  Similarity=0.092  Sum_probs=59.2

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhh-
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQ-  271 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~-  271 (368)
                      +|.....+..+.+....-.|.+++|.|.++.+|..++.++.+.|+.|+.+.+...                    ++.+ 
T Consensus       127 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  206 (329)
T cd05288         127 GMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEA  206 (329)
T ss_pred             ccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHH
Confidence            4444444555544444457899999997777899999999999998877654321                    1111 


Q ss_pred             ---hc-cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          272 ---IT-SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ---~~-~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                         .. +..|+++.++|.+.+- .-+.++++..++.+|..
T Consensus       207 v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         207 LKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             HHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeec
Confidence               11 3478888877754221 12346677777788753

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK06483 dihydromonapterin reductase; Provisional

Probab=91.88  E-value=0.23  Score=45.60  Aligned_cols=35  Identities=14%  Similarity=0.167  Sum_probs=31.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~   36 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTH   36 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc
Confidence            68899999988889999999999999999987764

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=91.83  E-value=0.36  Score=47.15  Aligned_cols=51  Identities=24%  Similarity=0.404  Sum_probs=38.5

Q ss_pred             EEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      |.|||+|. ||..++..|+.+|. +|+++....                          .+. +.+++||+||.++|.|.
T Consensus         1 I~IIGaG~-vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g~p~   78 (300)
T cd01339           1 ISIIGAGN-VGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAGIPR   78 (300)
T ss_pred             CEEECCCH-HHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecCCCC
Confidence            57899966 59999998887764 888886431                          233 45899999999998653

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK04663 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=91.82  E-value=0.49  Score=48.58  Aligned_cols=123  Identities=22%  Similarity=0.280  Sum_probs=71.4

Q ss_pred             Ccc-ceEEEEccCccchHHHHHHHhhC--CCEEEEEeCCCCC-HhhhccCCCEEEEecC-CCCcccCCCcCCCcEEEEee
Q 017679          230 IMG-KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTKN-PEQITSEADIVIAAAG-VANLVRGSWLKPGAVVLDVG  304 (368)
Q Consensus       230 l~G-K~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t~~-L~~~~~~ADIVIsAvG-~p~~I~~e~ik~gavVIDvg  304 (368)
                      +.| |+|.|+|.|+. |+..+.+|++.  |+.|+++...... ..+.+++ .+-+..-+ .+..+.    ..+.+|+--|
T Consensus         4 ~~~~~~v~viG~G~s-G~s~~~~l~~~~~~~~v~~~D~~~~~~~~~~l~~-g~~~~~g~~~~~~~~----~~d~vV~Spg   77 (438)
T PRK04663          4 WQGIKNVVVVGLGIT-GLSVVKHLRKYQPQLTVKVIDTRETPPGQEQLPE-DVELHSGGWNLEWLL----EADLVVTNPG   77 (438)
T ss_pred             ccCCceEEEEeccHH-HHHHHHHHHhcCCCCeEEEEeCCCCchhHHHhhc-CCEEEeCCCChHHhc----cCCEEEECCC
Confidence            456 88999999998 99999999887  5889999865421 1122332 44332211 121121    1345666666


Q ss_pred             cCCCCCCCCCCCCCCcEEEcccchhh-hhc-cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          305 TCPVDVSVDPSCEYGYRLMGDVCYEE-AMR-LASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       305 ~n~~~~~~d~t~~~~~kl~GDVd~~~-~~~-~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      +++.......-.+.+-+++++.++-. ..+ +.-   -|-|=-|.-|+..|+.++++.+
T Consensus        78 I~~~~p~~~~a~~~gi~i~~~~el~~~~~~~~~I---~VTGTnGKTTTt~ll~~iL~~~  133 (438)
T PRK04663         78 IALATPEIQQVLAAGIPVVGDIELFAWAVDKPVI---AITGSNGKSTVTDLTGVMAKAA  133 (438)
T ss_pred             CCCCCHHHHHHHHCCCcEEEHHHHHHhhcCCCEE---EEeCCCCHHHHHHHHHHHHHHC
Confidence            65532000000012346888887632 111 222   4557788999999999988754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	368
4a26_A	300	The Crystal Structure Of Leishmania Major N5,N10- M		3e-75
4a5o_A	286	Crystal Structure Of Pseudomonas Aeruginosa N5, N10		2e-66
1dia_A	306	Human Methylenetetrahydrofolate Dehydrogenase Cyclo		5e-66
1a4i_A	301	Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE		6e-66
3p2o_A	285	Crystal Structure Of Fold Bifunctional Protein From		8e-64
1b0a_A	288	5,10, Methylene-Tetrahydropholate DehydrogenaseCYCL		2e-63
3l07_A	285	Methylenetetrahydrofolate DehydrogenaseMETHENYLTETR		4e-57
4b4u_A	303	Crystal Structure Of Acinetobacter Baumannii N5, N1		2e-54
2c2x_A	281	Three Dimensional Structure Of Bifunctional Methyle		1e-50
3ngl_A	276	Crystal Structure Of Bifunctional 5,10-Methylenetet		3e-33
1edz_A	320	Structure Of The Nad-Dependent 5,10- Methylenetetra		1e-11

>pdb|4A26|A Chain A, The Crystal Structure Of Leishmania Major N5,N10- Methylenetetrahydrofolate DehydrogenaseCYCLOHYDROLASE Length = 300

Iteration: 1
 Score =  278 bits (712), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 149/302 (49%), Positives = 204/302 (67%), Gaps = 6/302 (1%)
Query: 70  NLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIG-KVPGLAVILVGERRDSQTYVRNKIKA 128
           ++ +A +IDGK+IA  IRS +  +V  +++  G +VPGLA I+VG+R DS+ YV+ K KA
Sbjct: 2   HMPSAQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKA 61
Query: 129 CEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLE 188
             EVG+ S   E  +  +++ +   +   N D + +GI+VQLPLP+HL+E + ++ +   
Sbjct: 62  AAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPH 121
Query: 189 KDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPT 248
           KD D   P+N+G L  +GREP F PCT KG I LL R G+E+ GK AVV+GRSNIVG P 
Sbjct: 122 KDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPV 181
Query: 249 SLLLQRHHATVSIVHALTKNPEQIT--SEADIVIAAAGVANLVRGSWLKPGAVVLDVGTC 306
           + LL + +ATV+IVH+ T   + I     ADIVIAA G    V+G W+K GA V+DVGT 
Sbjct: 182 AALLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTT 241
Query: 307 PVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
           PV    DPS + GYRL+GDVC+EEA   A+ I+PVPGGVGPMT+AMLL NTL++ K A G
Sbjct: 242 PVP---DPSRKDGYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALG 298
Query: 367 FT 368
            +
Sbjct: 299 VS 300

>pdb|4A5O|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa N5, N10- Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase (Fold) Length = 286

Iteration: 1
 Score =  249 bits (636), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/293 (47%), Positives = 184/293 (62%), Gaps = 11/293 (3%)
Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
           TA +IDGK+IA  +R  I + V   ++   +VPGLAVILVG    SQ YV +K K CEEV
Sbjct: 4   TAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEV 63
Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G  S   +     ++D++L  +   N D +I+GILVQLPLP HLD   +L+ +  +KDVD
Sbjct: 64  GFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVD 123
Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHP NIG LA   R PL  PCTPKG + LL  +G ++ G +AVV+G SNIVG P +L L
Sbjct: 124 GFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALEL 181
Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
                TV++ H  T++     S AD+V+ AAG   LV+G W+K GA+V+DVG        
Sbjct: 182 LLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGI------- 234
Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
             + +   RL+GDV YE A + AS ITPVPGGVGPMT A LL NTL +A+  +
Sbjct: 235 --NRQADGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLH 285

>pdb|1DIA|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase Cyclohydrolase Complexed With Nadp And Inhibitor Ly249543 Length = 306

Iteration: 1
 Score =  248 bits (632), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 128/293 (43%), Positives = 196/293 (66%), Gaps = 6/293 (2%)
Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
           A +++GK I+ +IR+ +  +V ++K+ + G  P LA++ VG R DS  Y+  K+KA EE+
Sbjct: 4   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 63
Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQH--LDEGKILDAVSLEKD 190
           GIK+   +     TE EV+  +++ N+DS+++G LVQLPL     ++  ++++A++ EKD
Sbjct: 64  GIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKD 123
Query: 191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSL 250
           VDG   +N G LA       FIPCTPKGC+EL+  +GV I G++AVV+GRS IVG P   
Sbjct: 124 VDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHD 183
Query: 251 LLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310
           LL  ++ATV+  H+ T + ++  ++ DI++ A G   +V+G W+KPGA+V+D   C ++ 
Sbjct: 184 LLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVID---CGINY 240
Query: 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
             D     G +++GDV Y+EA   AS ITPVPGGVGPMTVAML+ +T++SAKR
Sbjct: 241 VPDDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKR 293

>pdb|1A4I|A Chain A, Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE Length = 301

Iteration: 1
 Score =  247 bits (631), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 128/293 (43%), Positives = 196/293 (66%), Gaps = 6/293 (2%)
Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
           A +++GK I+ +IR+ +  +V ++K+ + G  P LA++ VG R DS  Y+  K+KA EE+
Sbjct: 4   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 63
Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQH--LDEGKILDAVSLEKD 190
           GIK+   +     TE EV+  +++ N+DS+++G LVQLPL     ++  ++++A++ EKD
Sbjct: 64  GIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKD 123
Query: 191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSL 250
           VDG   +N G LA       FIPCTPKGC+EL+  +GV I G++AVV+GRS IVG P   
Sbjct: 124 VDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHD 183
Query: 251 LLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310
           LL  ++ATV+  H+ T + ++  ++ DI++ A G   +V+G W+KPGA+V+D   C ++ 
Sbjct: 184 LLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVID---CGINY 240
Query: 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
             D     G +++GDV Y+EA   AS ITPVPGGVGPMTVAML+ +T++SAKR
Sbjct: 241 VPDDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKR 293

>pdb|3P2O|A Chain A, Crystal Structure Of Fold Bifunctional Protein From Campylobacter Jejuni Length = 285

Iteration: 1
 Score =  240 bits (613), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 133/288 (46%), Positives = 189/288 (65%), Gaps = 11/288 (3%)
Query: 75  TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGI 134
           T++DGK+++ +I+  + KE  +  KS G    LAVILVG+   SQTYV++K KACEE GI
Sbjct: 5   TLLDGKALSAKIKEEL-KEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGI 63
Query: 135 KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194
           KS+V    +  T++E+L  ++  N D S++GILVQLPLP H+ +  IL+++   KDVDGF
Sbjct: 64  KSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGF 123
Query: 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR 254
           HP+N+G L + G E  F+PCTP G  +LL    +++ GK+AV+IG SNIVG P +  L  
Sbjct: 124 HPINVGYLNL-GLESGFLPCTPLGVXKLLKAYEIDLEGKDAVIIGASNIVGRPXATXLLN 182
Query: 255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
             ATVS+ H  TK+    T +AD++I AAG  NL+R   +K G +V+DVG   ++     
Sbjct: 183 AGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDXVKEGVIVVDVGINRLESG--- 239
Query: 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                 +++GDV +EE  + +S ITPVPGGVGP T+A LL NT+ SAK
Sbjct: 240 ------KIVGDVDFEEVSKKSSYITPVPGGVGPXTIAXLLENTVKSAK 281

>pdb|1B0A|A Chain A, 5,10, Methylene-Tetrahydropholate DehydrogenaseCYCLOHYDROLASE FROM E COLI Length = 288

Iteration: 1
 Score =  239 bits (610), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 131/287 (45%), Positives = 179/287 (62%), Gaps = 11/287 (3%)
Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           A +IDGK+IA+++RS + ++V+    +  + PGLAV+LVG    SQ YV +K KACEEVG
Sbjct: 3   AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVG 62
Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
             S   +  +  +E E+L  +   N D++I+GILVQLPLP  +D  K+L+ +  +KDVDG
Sbjct: 63  FVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG 122
Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           FHP N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L 
Sbjct: 123 FHPYNVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL 180
Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
               T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG         
Sbjct: 181 LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGIN------- 233
Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 360
              E G +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct: 234 -RLENG-KVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278

>pdb|3L07|A Chain A, Methylenetetrahydrofolate DehydrogenaseMETHENYLTETRAHYDROFOLATE Cyclohydrolase, Putative Bifunctional Protein Fold From Francisella Tularensis. Length = 285

Iteration: 1
 Score =  218 bits (555), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/288 (41%), Positives = 171/288 (59%), Gaps = 11/288 (3%)
Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           +IDGKS++++++  +  +V+  K      P L  I+VG    S+TYV +K KAC +VGI 
Sbjct: 6   LIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGID 65
Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
           S V    +  TE E+L  +   N DSS++ ILVQLPLP H+++  ++ ++  EKDVDGFH
Sbjct: 66  SQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFH 125
Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P N+G L +R ++ L   CTPKG + +L   G++  G  AVV+G SN+VG P S LL   
Sbjct: 126 PTNVGRLQLRDKKCLE-SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA 184
Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
            ATV+  H  T + +  T++ADI+I A G  N +    +K GAVV+DVG   VD      
Sbjct: 185 KATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD------ 238
Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                +++GDV +       + ITPVPGGVGPMT+  LL NT   A+ 
Sbjct: 239 ----GKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQE 282

>pdb|4B4U|A Chain A, Crystal Structure Of Acinetobacter Baumannii N5, N10-Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase (Fold) Complexed With Nadp Cofactor Length = 303

Iteration: 1
 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/295 (38%), Positives = 175/295 (59%), Gaps = 12/295 (4%)
Query: 72  QTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEE 131
             A V+DG+++A++I   +   V  +K   G+ P LA ILVG+   S TYVR K  AC  
Sbjct: 21  HMALVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRR 80
Query: 132 VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV 191
           VG+ S+  E     T +++L  +   N +  ++GIL+Q P+P  +DE    DA+SL KDV
Sbjct: 81  VGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDV 140
Query: 192 DGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLL 251
           DG   L  G +AM   E  +   TP G + +L  + +EI GK+AVV+GRS I+G P +++
Sbjct: 141 DGVTCLGFGRMAM--GEAAYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMM 198
Query: 252 LQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311
           L + +ATV+I H+ T+N  ++  +ADI++ A G A L++  W+K GAVV+D G  P D  
Sbjct: 199 LLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGFHPRDGG 258
Query: 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
                      +GD+  +    +AS  TPVPGGVGPMT+  L+  T+++A++A G
Sbjct: 259 G----------VGDIQLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAAEKALG 303

>pdb|2C2X|A Chain A, Three Dimensional Structure Of Bifunctional Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase From Mycobacterium Tuberculosis Length = 281

Iteration: 1
 Score =  196 bits (499), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/292 (40%), Positives = 166/292 (56%), Gaps = 16/292 (5%)
Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           A ++DGK+  +EI   + + V  +  + G+ PGL  ILVG+   SQ YVR K   C +VG
Sbjct: 3   AIMLDGKATRDEIFGDLKQRVAALDAA-GRTPGLGTILVGDDPGSQAYVRGKHADCAKVG 61
Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
           I SI  +     +   +   +   N +    G +VQLPLP+HLDE   L+ V   KD DG
Sbjct: 62  ITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADG 121
Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
            HP N+G L +    PL  PCTP+G + LL R  + I G + VVIGR   VG P  LLL 
Sbjct: 122 LHPTNLGRLVLGTPAPL--PCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLT 179
Query: 254 R--HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311
           R   +ATV++ H  T++   +T +ADIV+AA GVA+L+    ++PGA V+DVG    D  
Sbjct: 180 RRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDDG 239
Query: 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                     L+GDV + +   LA  ++P PGGVGP+T A LL+N ++ A+R
Sbjct: 240 ----------LVGDV-HPDVWELAGHVSPNPGGVGPLTRAFLLTNVVELAER 280

>pdb|3NGL|A Chain A, Crystal Structure Of Bifunctional 5,10-Methylenetetrahydrofolate Dehydrogenase CYCLOHYDROLASE FROM THERMOPLASMA ACIDOPHILUM Length = 276

Iteration: 1
 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           ++ G+ IAE+    +   + R     G  P L +I +G+   +  Y R KI+  +++GI 
Sbjct: 3   ILRGEEIAEKKAENLHGIIERS----GLEPSLKLIQIGDNEAASIYARAKIRRGKKIGIA 58
Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
             + ++ D   +D +L  + +  +D  INGI+++ PLP+  D  +I+  +   KDVD   
Sbjct: 59  VDLEKYDDISMKD-LLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALS 117
Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAV-VIGRSNIVGLPTSLLLQR 254
           P N G +A+  RE   +P TP+  I+++   G     +N V ++ RS +VG P S++L  
Sbjct: 118 PYNQGLIAL-NRE-FLVPATPRAVIDIMDYYGYH---ENTVTIVNRSPVVGRPLSMMLLN 172
Query: 255 HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314
            + TVS+ H+ TK+   +T  + IV+ A G    +    + PG+VV+DVG   V+  V  
Sbjct: 173 RNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINYVNDKV-- 230
Query: 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362
                   +GD  +E+       ITPVPGGVGP+T   +L N + +A+
Sbjct: 231 --------VGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAE 270

>pdb|1EDZ|A Chain A, Structure Of The Nad-Dependent 5,10- Methylenetetrahydrofolate Dehydrogenase From Saccharomyces Cerevisiae Length = 320

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 81  SIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVT 139
            +AE   + I   V   KK+  G+ P L   L      ++ Y     K  E +G +  + 
Sbjct: 12  KVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLR 71
Query: 140 EFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPL-- 197
              D   +D +  A+   N D S+NGI+V  P+  +  +  +   V  EKDV+G + +  
Sbjct: 72  VIED---KDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYY 128
Query: 198 -----NIGNLAMRGREPLFIPCTPKGCIEL---------LIRSGVEIMGKNAVVIGRSNI 243
                N+  L    R    +PCTP   +++         L+  G  + GK  +VI RS I
Sbjct: 129 QNLYHNVRYLDKENRLKSILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEI 188
Query: 244 VGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGS--WLKPGAVVL 301
           VG P + LL    ATV  V     N ++ T    + +    V +L   S   LK  ++  
Sbjct: 189 VGRPLAALLANDGATVYSVDV--NNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246
Query: 302 DVGTCPVDVSVDPSCEYG----YRLMGDVCY---------EEAMRLASVITPVPGGVGPM 348
           DV    V     PS  Y     Y   G VC          ++    AS+  P+ G V   
Sbjct: 247 DVVITGV-----PSENYKFPTEYIKEGAVCINFACTKNFSDDVKEKASLYVPMTGKV--- 298
Query: 349 TVAMLLSNTL 358
           T+AMLL N L
Sbjct: 299 TIAMLLRNML 308

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	368
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	1e-171
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	1e-169
3l07_A	285	Bifunctional protein fold; structural genomics, ID	1e-156
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	1e-156
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	1e-156
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	1e-155
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	1e-145
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	1e-145
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	1e-124
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	2e-09
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	2e-04

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} Length = 300

 Score =  478 bits (1234), Expect = e-171
 Identities = 148/297 (49%), Positives = 201/297 (67%), Gaps = 6/297 (2%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEE 131
           +A +IDGK+IA  IRS +  +V  +++   G+VPGLA I+VG+R DS+ YV+ K KA  E
Sbjct: 5   SAQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAE 64

Query: 132 VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV 191
           VG+ S   E  +  +++ +   +   N D + +GI+VQLPLP+HL+E + ++ +   KD 
Sbjct: 65  VGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDA 124

Query: 192 DGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLL 251
           D   P+N+G L  +GREP F PCT KG I LL R G+E+ GK AVV+GRSNIVG P + L
Sbjct: 125 DALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAAL 184

Query: 252 LQRHHATVSIVHAL--TKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD 309
           L + +ATV+IVH+   T++       ADIVIAA G    V+G W+K GA V+DVGT PV 
Sbjct: 185 LMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVP 244

Query: 310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
              DPS + GYRL+GDVC+EEA   A+ I+PVPGGVGPMT+AMLL NTL++ K A G
Sbjct: 245 ---DPSRKDGYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALG 298

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* Length = 301

 Score =  472 bits (1218), Expect = e-169
 Identities = 129/297 (43%), Positives = 194/297 (65%), Gaps = 6/297 (2%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMK-KSIGKVPGLAVILVGERRDSQTYVRNKIKACEE 131
            A +++GK I+ +IR+ +  +V ++K +  G  P LA++ VG R DS  Y+  K+KA EE
Sbjct: 3   PAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEE 62

Query: 132 VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQH--LDEGKILDAVSLEK 189
           +GIK+   +     TE EV+  +++ N+DS+++G LVQLPL     ++  ++++A++ EK
Sbjct: 63  IGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEK 122

Query: 190 DVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTS 249
           DVDG   +N G LA       FIPCTPKGC+EL+  +GV I G++AVV+GRS IVG P  
Sbjct: 123 DVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMH 182

Query: 250 LLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD 309
            LL  ++ATV+  H+ T + ++  ++ DI++ A G   +V+G W+KPGA+V+D G   V 
Sbjct: 183 DLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVP 242

Query: 310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366
              D     G +++GDV Y+EA   AS ITPVPGGVGPMTVAML+ +T++SAKR   
Sbjct: 243 ---DDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE 296

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} Length = 285

 Score =  440 bits (1134), Expect = e-156
 Identities = 118/293 (40%), Positives = 169/293 (57%), Gaps = 11/293 (3%)

Query: 72  QTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEE 131
               +IDGKS++++++  +  +V+  K      P L  I+VG    S+TYV +K KAC +
Sbjct: 2   NAMILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQ 61

Query: 132 VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV 191
           VGI S V    +  TE E+L  +   N DSS++ ILVQLPLP H+++  ++ ++  EKDV
Sbjct: 62  VGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDV 121

Query: 192 DGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLL 251
           DGFHP N+G L +R  +     CTPKG + +L   G++  G  AVV+G SN+VG P S L
Sbjct: 122 DGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQL 180

Query: 252 LQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311
           L    ATV+  H  T + +  T++ADI+I A G  N +    +K GAVV+DVG   VD  
Sbjct: 181 LLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD-- 238

Query: 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 364
                    +++GDV +       + ITPVPGGVGPMT+  LL NT   A+  
Sbjct: 239 --------GKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQEL 283

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} Length = 286

 Score =  439 bits (1132), Expect = e-156
 Identities = 140/293 (47%), Positives = 182/293 (62%), Gaps = 11/293 (3%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
           TA +IDGK+IA  +R  I + V   ++   +VPGLAVILVG    SQ YV +K K CEEV
Sbjct: 4   TAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEV 63

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G  S   +     ++D++L  +   N D +I+GILVQLPLP HLD   +L+ +  +KDVD
Sbjct: 64  GFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVD 123

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHP NIG LA   R PL  PCTPKG + LL  +G ++ G +AVV+G SNIVG P +L L
Sbjct: 124 GFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALEL 181

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
                TV++ H  T++     S AD+V+ AAG   LV+G W+K GA+V+DVG        
Sbjct: 182 LLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQA--- 238

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
                   RL+GDV YE A + AS ITPVPGGVGPMT A LL NTL +A+  +
Sbjct: 239 ------DGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLH 285

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 Length = 288

 Score =  439 bits (1132), Expect = e-156
 Identities = 129/295 (43%), Positives = 181/295 (61%), Gaps = 11/295 (3%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
            A +IDGK+IA+++RS + ++V+    +  + PGLAV+LVG    SQ YV +K KACEEV
Sbjct: 2   AAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEV 61

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           G  S   +  +  +E E+L  +   N D++I+GILVQLPLP  +D  K+L+ +  +KDVD
Sbjct: 62  GFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVD 121

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHP N+G L    R P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L
Sbjct: 122 GFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMEL 179

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
                T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++   
Sbjct: 180 LLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE--- 236

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367
           +       +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +    +  
Sbjct: 237 NG------KVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDP 285

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} Length = 285

 Score =  436 bits (1123), Expect = e-155
 Identities = 132/291 (45%), Positives = 193/291 (66%), Gaps = 11/291 (3%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
             T++DGK+++ +I+  + ++ + +K   G    LAVILVG+   SQTYV++K KACEE 
Sbjct: 3   AMTLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEEC 61

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           GIKS+V    +  T++E+L  ++  N D S++GILVQLPLP H+ +  IL+++   KDVD
Sbjct: 62  GIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVD 121

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           GFHP+N+G L + G E  F+PCTP G ++LL    +++ GK+AV+IG SNIVG P + +L
Sbjct: 122 GFHPINVGYLNL-GLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATML 180

Query: 253 QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312
               ATVS+ H  TK+    T +AD++I AAG  NL+R   +K G +V+DVG   ++   
Sbjct: 181 LNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLE--- 237

Query: 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                   +++GDV +EE  + +S ITPVPGGVGPMT+AMLL NT+ SAK 
Sbjct: 238 SG------KIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKN 282

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A Length = 276

 Score =  411 bits (1058), Expect = e-145
 Identities = 83/288 (28%), Positives = 149/288 (51%), Gaps = 19/288 (6%)

Query: 76  VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIK 135
           ++ G+ IAE+      + +  + +  G  P L +I +G+   +  Y R KI+  +++GI 
Sbjct: 3   ILRGEEIAEKKA----ENLHGIIERSGLEPSLKLIQIGDNEAASIYARAKIRRGKKIGIA 58

Query: 136 SIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195
             + ++ D  +  ++L  + +  +D  INGI+++ PLP+  D  +I+  +   KDVD   
Sbjct: 59  VDLEKYDD-ISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALS 117

Query: 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH 255
           P N G +A+       +P TP+  I+++   G         ++ RS +VG P S++L   
Sbjct: 118 PYNQGLIALN--REFLVPATPRAVIDIMDYYGYH--ENTVTIVNRSPVVGRPLSMMLLNR 173

Query: 256 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
           + TVS+ H+ TK+   +T  + IV+ A G    +    + PG+VV+DVG   V+      
Sbjct: 174 NYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINYVND----- 228

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                +++GD  +E+       ITPVPGGVGP+T   +L N + +A+ 
Sbjct: 229 -----KVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAEF 271

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A Length = 281

 Score =  410 bits (1056), Expect = e-145
 Identities = 117/293 (39%), Positives = 166/293 (56%), Gaps = 16/293 (5%)

Query: 73  TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
            A ++DGK+  +EI   + + V  +  + G+ PGL  ILVG+   SQ YVR K   C +V
Sbjct: 2   GAIMLDGKATRDEIFGDLKQRVAALDAA-GRTPGLGTILVGDDPGSQAYVRGKHADCAKV 60

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192
           GI SI  +     +   +   +   N +    G +VQLPLP+HLDE   L+ V   KD D
Sbjct: 61  GITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDAD 120

Query: 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 252
           G HP N+G L +    P  +PCTP+G + LL R  + I G + VVIGR   VG P  LLL
Sbjct: 121 GLHPTNLGRLVL--GTPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLL 178

Query: 253 QR--HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310
            R   +ATV++ H  T++   +T +ADIV+AA GVA+L+    ++PGA V+DVG    D 
Sbjct: 179 TRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDD 238

Query: 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                      L+GDV + +   LA  ++P PGGVGP+T A LL+N ++ A+R
Sbjct: 239 ----------GLVGDV-HPDVWELAGHVSPNPGGVGPLTRAFLLTNVVELAER 280

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Length = 320

 Score =  359 bits (924), Expect = e-124
 Identities = 76/335 (22%), Positives = 122/335 (36%), Gaps = 67/335 (20%)

Query: 72  QTATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACE 130
           +    I    +AE   + I   V   KK+  G+ P L   L      ++ Y     K  E
Sbjct: 3   KPGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSE 62

Query: 131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKD 190
            +G +  +        +D +  A+   N D S+NGI+V  P+  +  +  +   V  EKD
Sbjct: 63  SMGFRYDLRVIE---DKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKD 119

Query: 191 VDGFHPLNIGNL-------AMRGREPLFIPCTPKGCIELL---------IRSGVEIMGKN 234
           V+G + +   NL           R    +PCTP   +++L         +  G  + GK 
Sbjct: 120 VEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKK 179

Query: 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-------------------------P 269
            +VI RS IVG P + LL    ATV  V                                
Sbjct: 180 CIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLL 239

Query: 270 EQITSEADIVIAAAGVAN-LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCY 328
           ++ + ++D+VI      N      ++K GAV ++                          
Sbjct: 240 KKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTKNF------------------S 281

Query: 329 EEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
           ++    AS+  P+ G V   T+AMLL N L   + 
Sbjct: 282 DDVKEKASLYVPMTGKV---TIAMLLRNMLRLVRN 313

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 56.9 bits (137), Expect = 2e-09
 Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 33/163 (20%)

Query: 215 TPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQIT 273
           T +G I + I+ +   I G N  V+G   + G+  +       A V +    +    +I 
Sbjct: 137 TAEGTIMMAIQHTDFTIHGANVAVLGLGRV-GMSVARKFAALGAKVKVGARESDLLARIA 195

Query: 274 S----------------EADIVIAA--AGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPS 315
                            + D+ I    A V      + +     V+D+ + P       +
Sbjct: 196 EMGMEPFHISKAAQELRDVDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTDFRYA 255

Query: 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 358
            + G + +              +  +PG V P T   +L++ L
Sbjct: 256 EKRGIKALL-------------VPGLPGIVAPKTAGRILADVL 285

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 41/167 (24%)

Query: 215 TPKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV----------- 262
           T +G I L I  +   I G    V+G     G+  +       A V +            
Sbjct: 139 TVEGTIMLAIQHTDYTIHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARIT 197

Query: 263 -----HALTKNPEQITSEADIVIAAAGVANLVRG--SWLKPGAVVLDVGTCPVDVSVDPS 315
                   T   ++   + DI I       L +   S + P  ++       +D++  P 
Sbjct: 198 EMGLVPFHTDELKEHVKDIDICINTIPSMILNQTVLSSMTPKTLI-------LDLASRPG 250

Query: 316 CEYGYRLMGDVCYEEAMRLASVI----TPVPGGVGPMTVAMLLSNTL 358
                         +      +       +PG V P T   +L+N L
Sbjct: 251 G----------TDFKYAEKQGIKALLAPGLPGIVAPKTAGQILANVL 287

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	368
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	100.0
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	100.0
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	100.0
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	100.0
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	100.0
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	100.0
3l07_A	285	Bifunctional protein fold; structural genomics, ID	100.0
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	100.0
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	100.0
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	100.0
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	99.96
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	99.94
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	99.94
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	99.94
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	99.94
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	99.94
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	99.93
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	99.92
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	99.9
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	99.9
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	99.89
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	99.89
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	99.88
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	99.85
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	99.84
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	99.84
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	99.82
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	99.54
2dvm_A	439	Malic enzyme, 439AA long hypothetical malate oxido	99.42
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.16
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	99.07
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.95
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.95
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	98.78
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	98.74
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	98.71
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.67
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.61
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.57
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	98.45
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	98.42
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	98.39
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.33
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.29
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.22
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	98.19
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	98.18
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.16
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	98.14
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	98.1
2o4c_A	380	Erythronate-4-phosphate dehydrogenase; erythronate	98.07
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.07
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	98.07
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	98.06
2qrj_A	394	Saccharopine dehydrogenase, NAD+, L-lysine- formin	98.05
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	98.05
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	98.05
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	98.04
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	98.04
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.04
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	98.03
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	98.03
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	98.02
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	98.02
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	98.02
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	98.01
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.99
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	97.98
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	97.98
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	97.97
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.97
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	97.96
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	97.93
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	97.92
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	97.91
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	97.91
1ygy_A	529	PGDH, D-3-phosphoglycerate dehydrogenase; oxidored	97.9
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	97.89
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	97.89
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	97.89
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	97.85
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	97.84
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	97.82
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	97.8
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	97.8
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	97.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.76
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	97.73
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	97.71
3kb6_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	97.67
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.66
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.6
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.58
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.57
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.57
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.53
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.51
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.5
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.47
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.45
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.43
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.41
3nv9_A	487	Malic enzyme; rossmann fold, oxidoreductase; 2.25A	97.39
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.37
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.36
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.35
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.34
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.34
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	97.33
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.31
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.27
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.27
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	97.2
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.18
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	97.16
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.14
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.12
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.07
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.06
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.04
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.03
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.99
3csu_A	310	Protein (aspartate carbamoyltransferase); transfer	96.98
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.97
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.95
3sds_A	353	Ornithine carbamoyltransferase, mitochondrial; str	96.93
3gd5_A	323	Otcase, ornithine carbamoyltransferase; structural	96.93
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	96.92
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.87
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	95.91
1pg5_A	299	Aspartate carbamoyltransferase; 2.60A {Sulfolobus	96.86
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.85
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.84
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.82
3tpf_A	307	Otcase, ornithine carbamoyltransferase; structural	96.79
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.78
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.74
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.71
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	96.7
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.69
4f2g_A	309	Otcase 1, ornithine carbamoyltransferase 1; struct	96.67
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.66
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.65
1ml4_A	308	Aspartate transcarbamoylase; beta pleated sheet, p	96.65
4ep1_A	340	Otcase, ornithine carbamoyltransferase; structural	96.62
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.61
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.6
3d6n_B	291	Aspartate carbamoyltransferase; reactor, chamber,	96.6
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	96.6
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.59
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.59
2ef0_A	301	Ornithine carbamoyltransferase; TTHA1199, thermus	96.59
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.58
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.56
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.56
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.54
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.54
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.54
1dxh_A	335	Ornithine carbamoyltransferase; transcarbamylase;	96.54
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.53
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.52
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.51
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	96.49
1pvv_A	315	Otcase, ornithine carbamoyltransferase; dodecamer;	96.48
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.48
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.47
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.46
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.45
3r7f_A	304	Aspartate carbamoyltransferase; aspartate transcar	96.45
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.44
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.44
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.43
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.43
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.43
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.42
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	96.42
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.41
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.4
4a8t_A	339	Putrescine carbamoyltransferase; trabnsferase PALO	96.39
4ekn_B	306	Aspartate carbamoyltransferase; atcase, aspartate	96.38
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.38
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.37
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	96.35
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.35
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.34
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.33
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.32
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	96.32
1vlv_A	325	Otcase, ornithine carbamoyltransferase; TM1097, st	96.31
2i6u_A	307	Otcase, ornithine carbamoyltransferase; X-RAY crys	96.3
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.3
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.29
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.29
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.29
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.29
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.29
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.28
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.28
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.28
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.28
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.26
2w37_A	359	Ornithine carbamoyltransferase, catabolic; transca	96.25
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	96.25
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.21
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.2
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.2
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.2
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.2
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	96.19
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.17
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.16
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	96.16
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.15
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.15
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.14
1duv_G	333	Octase-1, ornithine transcarbamoylase; enzyme-inhi	96.14
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.14
4a8p_A	355	Putrescine carbamoyltransferase; ornithine agmatin	96.14
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	96.14
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.14
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.11
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.11
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.11
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.1
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	96.1
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.1
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.09
3kzn_A	359	Aotcase, N-acetylornithine carbamoyltransferase; t	96.08
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.07
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.07
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.06
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.05
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	96.05
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.05
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.05
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.02
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.02
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.01
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.01
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.01
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	96.01
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.0
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.99
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	95.99
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.98
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.96
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	95.96
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	95.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.94
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.93
1gtm_A	419	Glutamate dehydrogenase; oxidoreductase, NAD, NADP	95.93
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.92
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	95.91
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	95.91
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.91
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	95.91
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	95.9
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.89
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	95.89
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	95.89
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	95.88
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	95.88
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.88
1oth_A	321	Protein (ornithine transcarbamoylase); transferase	95.88
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	95.87
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	95.87
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.87
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	95.87
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	95.87
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	95.87
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	95.86
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.86
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.86
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	95.86
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	95.86
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	95.86
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	95.85
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	95.85
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	95.85
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	95.84
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	95.84
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.84
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	95.83
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	95.83
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	95.83
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	95.82
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.81
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.81
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	95.81
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	95.8
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.8
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	95.79
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.79
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.78
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	95.77
4h31_A	358	Otcase, ornithine carbamoyltransferase; structural	95.76
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	95.76
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.76
4amu_A	365	Ornithine carbamoyltransferase, catabolic; ornithi	95.76
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	95.76
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.75
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	95.75
1gq2_A	555	Malic enzyme; oxidoreductase, pigeon liver, NADP-d	95.75
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.74
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	95.74
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.74
3grf_A	328	Ornithine carbamoyltransferase; ornithine transcar	95.73
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	95.73
4dqx_A	277	Probable oxidoreductase protein; structural genomi	95.73
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	95.72
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	95.72
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	95.71
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	95.71
4hv4_A	494	UDP-N-acetylmuramate--L-alanine ligase; MURC, yers	95.71
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.71
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.7
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.67
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	95.67
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.67
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.66
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.66
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.65
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.65
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.64
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	95.63
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	95.63
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.63
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.62
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.61
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.61
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.61
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.6
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.6
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.59
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.58
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	95.57
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.56
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.55
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.54
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.52
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.52
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	95.51
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	95.51
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.5
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	95.5
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.49
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.49
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	95.49
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	95.49
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.49
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.48
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.48
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	95.48
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	95.47
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.46
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	95.46
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.46
1o0s_A	605	NAD-ME, NAD-dependent malic enzyme; oxidoreductase	95.44
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	95.43
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.43
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	95.43
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	95.4
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.39
3fr7_A	525	Putative ketol-acid reductoisomerase (OS05G057370	95.38
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	95.36
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	95.36
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.36
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.35
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.35
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.35
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	95.35
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	95.35
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	95.34
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.34
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.33
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	95.32
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	95.31
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	95.31
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	95.31
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	95.31
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.3
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.29
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	95.28
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.27
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	95.26
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.26
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.25
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.25
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	95.25
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.22
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.21
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	95.21
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.21
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	95.2
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.19
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	95.19
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	95.19
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.18
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	95.17
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	95.16
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.15
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	95.15
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.15
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	95.15
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	95.14
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.13
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.12
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.12
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	95.11
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	95.11
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	95.1
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.08
1pj3_A	564	NAD-dependent malic enzyme, mitochondrial; oxidati	95.07
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	95.07
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.06
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	95.06
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	95.06
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.05
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.04
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	95.03
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	95.02
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	95.01
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	94.99
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	94.98
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.98
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	94.98
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	94.98
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.98
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	94.97
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	94.97
3rih_A	293	Short chain dehydrogenase or reductase; structural	94.95
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	94.95
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	94.95
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	94.94
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	94.94
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	94.94
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	94.94
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.93
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	94.92
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	94.9
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	94.88
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	94.86
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	94.86
3imf_A	257	Short chain dehydrogenase; structural genomics, in	94.84
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	94.84
2x5o_A	439	UDP-N-acetylmuramoylalanine--D-glutamate ligase; A	94.83
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	94.83
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	94.83
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.83
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	94.81
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	94.8
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	94.78
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	94.78
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.77
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	94.76
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	94.75
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	94.75
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	94.75
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	94.74
1zq6_A	359	Otcase, ornithine carbamoyltransferase; alpha/beta	94.74
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	94.74
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	94.73
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	94.72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	94.71
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	94.71
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	94.7
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	94.7
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.7
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	94.7
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	94.66
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	94.66
3tl2_A	315	Malate dehydrogenase; center for structural genomi	94.66
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	94.66
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	94.65
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	94.65
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	94.65
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	94.64
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	94.64
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	94.63
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	94.63
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.62
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	94.62
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.61
3aog_A	440	Glutamate dehydrogenase; NAD(H), oxidoreducta; HET	94.61
4f6c_A	427	AUSA reductase domain protein; thioester reductase	94.61
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	94.57
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	94.57
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.56
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	94.55
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	94.53
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	94.5
3hn7_A	524	UDP-N-acetylmuramate-L-alanine ligase; ATP-binding	94.49
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	94.49
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	94.49
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	94.49
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	94.46
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	94.46
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	94.45
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	94.45

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=100.00  E-value=6.8e-98  Score=722.33  Aligned_cols=292  Identities=39%  Similarity=0.661  Sum_probs=276.7

Q ss_pred             CCCCCcccccceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcC
Q 017679           63 LPQRNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFA  142 (368)
Q Consensus        63 ~~~~~~~~~~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~  142 (368)
                      +...+.++.+||+|||||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||
T Consensus        12 ~~~~~~~~~~Ma~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp   91 (303)
T 4b4u_A           12 SGENLYFQGHMALVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRVGMDSLKIELP   91 (303)
T ss_dssp             ----------CCEECCHHHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CcccccccCCCCEEeehHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEecC
Confidence            55556677789999999999999999999999999988899999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHH
Q 017679          143 DGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIEL  222 (368)
Q Consensus       143 ~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~l  222 (368)
                      ++++|+||++.|++||+|++|||||||+|||+|+|+++++++|+|+||||||||.|.|+|+.|  .+.|+||||.||+++
T Consensus        92 ~~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g--~~~~~PcTp~gv~~l  169 (303)
T 4b4u_A           92 QETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMTI  169 (303)
T ss_dssp             TTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTT--CCCCCCHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCC--CCcccCccHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999987  689999999999999


Q ss_pred             HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEE
Q 017679          223 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLD  302 (368)
Q Consensus       223 L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVID  302 (368)
                      |++|+++++||+|+|||||++||+|++++|+++|||||+||++|++|++++++|||||+|+|+|++|+++|+|||++|||
T Consensus       170 L~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G~p~~i~~d~vk~GavVID  249 (303)
T 4b4u_A          170 LKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVD  249 (303)
T ss_dssp             HHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHHTCSEEEECSCSTTCBCGGGSCTTCEEEE
T ss_pred             HHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhhcCCeEEeccCCCCccccccccCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          303 VGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       303 vg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                      +|+|+.+          ++++|||||+++.++|++||||||||||||++|||+|++++++|++|
T Consensus       250 VGin~~~----------~~~vGDVdf~~v~~~a~~iTPVPGGVGPmTiamLl~Ntv~aa~r~~G  303 (303)
T 4b4u_A          250 AGFHPRD----------GGGVGDIQLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAAEKALG  303 (303)
T ss_dssp             CCCBCCT----------TSCBCSBCCTTGGGTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             eceecCC----------CCeECCcCHHHHhhhCcEECCCCCCchHHHHHHHHHHHHHHHHHhcC
Confidence            9999864          47899999999999999999999999999999999999999999876

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=100.00  E-value=2e-92  Score=685.09  Aligned_cols=292  Identities=51%  Similarity=0.843  Sum_probs=281.3

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcCC-CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIG-KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL  151 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g-~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~  151 (368)
                      ||++||||++|++|++++++++++|+++.| ++|+||+|+||+||+|.+|+++|.|+|+++||++++++||++++|+||+
T Consensus         5 ma~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell   84 (300)
T 4a26_A            5 SAQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLE   84 (300)
T ss_dssp             CCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHH
T ss_pred             ccEEeehHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence            588999999999999999999999998877 9999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCc
Q 017679          152 NALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIM  231 (368)
Q Consensus       152 ~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~  231 (368)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|+|+|+.|+..++|+||||+|++++|++|+++++
T Consensus        85 ~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~i~l~  164 (300)
T 4a26_A           85 VNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMA  164 (300)
T ss_dssp             HHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHTCCCT
T ss_pred             HHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcCCCCC
Confidence            99999999999999999999999999999999999999999999999999998755689999999999999999999999


Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHh--hhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPE--QITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~--~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~  309 (368)
                      ||+|+|||||++||+|+|++|+++||+||+||++|.+++  +++++|||||+|+|.|++|+.+|+|+|++|||+|+|+++
T Consensus       165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~  244 (300)
T 4a26_A          165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVP  244 (300)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHHHHHHHTCSEEEECSCCTTCBCGGGSCTTCEEEECCCEEES
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhhccCCEEEECCCCCCCCcHHhcCCCcEEEEEeccCCc
Confidence            999999999999999999999999999999999999999  999999999999999999999999999999999999987


Q ss_pred             CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                         |+++++++|++|||||+++.++|++||||||||||||++|||+|+++++++|.+.
T Consensus       245 ---~~~~~~g~kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~~  299 (300)
T 4a26_A          245 ---DPSRKDGYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALGV  299 (300)
T ss_dssp             ---CSCSTTSCEEECSBCHHHHTTTCSEEECTTTSSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ---CCcccCCceeecCccHHHHHhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHhcC
Confidence               5544445699999999999999999999999999999999999999999999875

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.3e-92  Score=679.19  Aligned_cols=284  Identities=49%  Similarity=0.776  Sum_probs=275.3

Q ss_pred             cceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679           72 QTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL  151 (368)
Q Consensus        72 ~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~  151 (368)
                      ++|++||||++|++|++++++++++|+++.+++|+||+|+||+||+|++|+++|.|+|+++||++++++||++++|+||+
T Consensus         3 m~a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell   82 (286)
T 4a5o_A            3 MTAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLL   82 (286)
T ss_dssp             -CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHH
T ss_pred             cccEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence            34789999999999999999999999988778899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCc
Q 017679          152 NALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIM  231 (368)
Q Consensus       152 ~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~  231 (368)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|.|+|+.|  .++|+||||.|++++|++|+++++
T Consensus        83 ~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~g~l~~g--~~~~~PcTp~gv~~lL~~~~i~l~  160 (286)
T 4a5o_A           83 ALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRLAQR--MPLLRPCTPKGIMTLLASTGADLY  160 (286)
T ss_dssp             HHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCT
T ss_pred             HHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999999999999999999999987  678999999999999999999999


Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS  311 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~  311 (368)
                      ||+|+|||||++||+|+|++|+++||+||+||++|++|++++++|||||+|+|+|++|+.+|+|||++|||+|+|+++  
T Consensus       161 Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~--  238 (286)
T 4a5o_A          161 GMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQA--  238 (286)
T ss_dssp             TCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHTCSEEEECCCCTTCBCGGGSCTTCEEEECCSCSSC--
T ss_pred             CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHhccCCEEEECCCCCCCCCHHHcCCCeEEEEecccccc--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999986  


Q ss_pred             CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                             +||++|||||+++.++|++||||||||||||++|||+|++++++++.+
T Consensus       239 -------~gkl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~~~~  286 (286)
T 4a5o_A          239 -------DGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD  286 (286)
T ss_dssp             -------CCCSSCSBCHHHHHHHCSEECCSSCSHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             -------cCCcccCccHHHHHhhceEeCCCCCcchHHHHHHHHHHHHHHHHHhcC
Confidence                   369999999999999999999999999999999999999999998764

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=100.00  E-value=5.9e-92  Score=678.02  Aligned_cols=284  Identities=45%  Similarity=0.754  Sum_probs=275.0

Q ss_pred             cceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679           72 QTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL  151 (368)
Q Consensus        72 ~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~  151 (368)
                      +||++||||++|++|++++++++++|+++++++|+||+|+||+||+|.+|+++|.|+|+++||+++.++||++++|+||+
T Consensus         1 ~ma~iidGk~ia~~i~~~~~~~v~~l~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell   80 (288)
T 1b0a_A            1 MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELL   80 (288)
T ss_dssp             -CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHH
T ss_pred             CCCeEecHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            36889999999999999999999999987558899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCc
Q 017679          152 NALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIM  231 (368)
Q Consensus       152 ~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~  231 (368)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+||||||||.|.|+|+.|  .++|+||||.|++++|++|+++++
T Consensus        81 ~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g--~~~~~PcTp~gi~~ll~~~~i~l~  158 (288)
T 1b0a_A           81 ELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTF  158 (288)
T ss_dssp             HHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCT
T ss_pred             HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhHHhCC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999999999999999999999987  579999999999999999999999


Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS  311 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~  311 (368)
                      ||+|+|||+|++||+|+|++|+++||+||+||++|.+|.+++++|||||+|+|+|++|+++|+|+|++|||+|+|+.+  
T Consensus       159 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~lI~~~~vk~GavVIDVgi~r~~--  236 (288)
T 1b0a_A          159 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE--  236 (288)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEECT--
T ss_pred             CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhccCCEEEECCCCcCcCCHHHcCCCcEEEEccCCccC--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999875  


Q ss_pred             CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                             +|+++|||||+++.++|++||||||||||||++|||+|+++++++|+.
T Consensus       237 -------~g~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~  284 (288)
T 1b0a_A          237 -------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHD  284 (288)
T ss_dssp             -------TSCEECSBCHHHHHHHCSEECCSSSSSHHHHHHHHHHHHHHHHHHTTS
T ss_pred             -------CCCccCCcCHHHHhhhccEecCCCCCccHHHHHHHHHHHHHHHHHhhc
Confidence                   358999999999999999999999999999999999999999998764

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=100.00  E-value=1.1e-91  Score=679.86  Aligned_cols=291  Identities=44%  Similarity=0.773  Sum_probs=273.2

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL  151 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~  151 (368)
                      ++++||||++|++|++++++++++|+++. +++|+||+|+||+||+|.+|+++|.|+|+++||+++.++||++++|+||+
T Consensus         3 ~a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell   82 (301)
T 1a4i_A            3 PAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVM   82 (301)
T ss_dssp             CCEECCHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHH
T ss_pred             CCEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence            37899999999999999999999999875 47899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCccEEEEeCCCCCC--CCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCC
Q 017679          152 NALSNYNQDSSINGILVQLPLPQH--LDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVE  229 (368)
Q Consensus       152 ~~I~~LN~D~~V~GIlVqlPLp~~--id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~  229 (368)
                      +.|++||+|++|||||||+|||+|  +|+++++++|+|+||||||||.|.|+|+.|...++|+||||.|++++|++|+++
T Consensus        83 ~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~~~i~  162 (301)
T 1a4i_A           83 KYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVP  162 (301)
T ss_dssp             HHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTTTCC
T ss_pred             HHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHHcCCC
Confidence            999999999999999999999999  999999999999999999999999999988544799999999999999999999


Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD  309 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~  309 (368)
                      ++||+|+|||+|++||+|+|++|+++||+||+||++|.+|.+++++|||||+|+|+|++|+++|+|||++|||+|+|+++
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~~  242 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVP  242 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC--
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHhccCCEEEECCCCcccCCHHHcCCCcEEEEccCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                         |++++++++++|||||+++.++|++||||||||||||++|||+|+++++++|+.
T Consensus       243 ---d~~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGpmTiamLl~Ntv~aa~~~~~  296 (301)
T 1a4i_A          243 ---DDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE  296 (301)
T ss_dssp             -----------CCBCSBCHHHHTTTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ---cccccCCCeeeccccHHHhhhhceEeCCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence               443333458999999999999999999999999999999999999999998764

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=100.00  E-value=9.3e-92  Score=676.15  Aligned_cols=283  Identities=46%  Similarity=0.759  Sum_probs=273.4

Q ss_pred             cceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679           72 QTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL  151 (368)
Q Consensus        72 ~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~  151 (368)
                      +++++||||++|++|++++++++++|+++ |.+|+||+|+||+||+|.+|+++|.|+|+++||++++++||++++|+||+
T Consensus         2 ~~~~iidGk~~a~~i~~~~~~~v~~l~~~-~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell   80 (285)
T 3p2o_A            2 NAMTLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELL   80 (285)
T ss_dssp             CCCEECCHHHHHHHHHHHHHHHHHHHHTT-TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHH
T ss_pred             CCCEEeehHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence            45789999999999999999999999876 56999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc-cccCCHHHHHHHHHHhCCCC
Q 017679          152 NALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL-FIPCTPKGCIELLIRSGVEI  230 (368)
Q Consensus       152 ~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~-~~PcTa~gv~~lL~~~~i~l  230 (368)
                      +.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|+|+|+.|  .+. |+||||+|++++|++|++++
T Consensus        81 ~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g--~~~g~~PcTp~gv~~lL~~~~i~l  158 (285)
T 3p2o_A           81 ALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLG--LESGFLPCTPLGVMKLLKAYEIDL  158 (285)
T ss_dssp             HHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTT--CCSSCCCHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcccccccCCHhhhhhhhcC--CCCCCCCCCHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999999999999999999999999987  466 99999999999999999999


Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV  310 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~  310 (368)
                      +||+|+|||||++||+|+|++|+++||+||+||++|++|++++++|||||+|+|+|++|+++|+|+|++|||+|+|+++ 
T Consensus       159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~~-  237 (285)
T 3p2o_A          159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLE-  237 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHTTCSEEEECSSCTTCBCGGGSCTTEEEEECCCEECT-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHHhhcCCEEEECCCCCCcCCHHHcCCCeEEEEeccCccc-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999976 


Q ss_pred             CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679          311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~  366 (368)
                              +||++|||||+++.++|++||||||||||||++|||+|++++++++++
T Consensus       238 --------~gkl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~~~~  285 (285)
T 3p2o_A          238 --------SGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRLN  285 (285)
T ss_dssp             --------TSCEECSBCHHHHTTTEEEECCSSSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred             --------CCCEeccccHHHHHhhheEeCCCCCcCcHHHHHHHHHHHHHHHHHhhC
Confidence                    369999999999999999999999999999999999999999998764

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=100.00  E-value=6.2e-91  Score=670.41  Aligned_cols=281  Identities=42%  Similarity=0.699  Sum_probs=272.9

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      +++||||++|++|++++++++++|+++.+++|+||+|+||+||+|.+|+++|.|+|+++||++++++||++++|+||++.
T Consensus         4 ~~ildGk~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~   83 (285)
T 3l07_A            4 MILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLEL   83 (285)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHH
T ss_pred             CEEeehHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHH
Confidence            57999999999999999999999998878999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      |++||+|++|||||||+|||+|+|+++++++|+|+|||||||++|.|+|+.|. .++|+||||.|++++|++|+++++||
T Consensus        84 I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~-~~~~~PcTp~gv~~lL~~~~i~l~Gk  162 (285)
T 3l07_A           84 IDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGA  162 (285)
T ss_dssp             HHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTC-TTCCCCHHHHHHHHHHHHTTCCCTTC
T ss_pred             HHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcccccccCChhheeehhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999873 28899999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD  313 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d  313 (368)
                      +|+|||||++||+|+|++|+++||+||+|||+|++|++++++|||||+|+|+|++|+++|+|+|++|||+|+|+++    
T Consensus       163 ~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~----  238 (285)
T 3l07_A          163 YAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD----  238 (285)
T ss_dssp             EEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCEEET----
T ss_pred             EEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHhcccCCEEEECCCCCCCCCHHHcCCCcEEEEecccCcC----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999875    


Q ss_pred             CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                            |+++|||||+++.++|++||||||||||||++|||+|++++++++.
T Consensus       239 ------g~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~~~  284 (285)
T 3l07_A          239 ------GKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN  284 (285)
T ss_dssp             ------TEEECSBCHHHHTTTCSEECCSSSSSHHHHHHHHHHHHHHHHHHTC
T ss_pred             ------CceecCccHHHHHhhheEeCCCCCcChHHHHHHHHHHHHHHHHHhh
Confidence                  5999999999999999999999999999999999999999998764

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=100.00  E-value=3e-89  Score=655.72  Aligned_cols=272  Identities=31%  Similarity=0.567  Sum_probs=264.7

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL  154 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I  154 (368)
                      ++||||++|++|++++++++++|    |++|+||+|+||+||+|.+|+++|.|+|+++|| ++.++||++++|+||++.|
T Consensus         2 ~ildGk~~a~~i~~~~~~~v~~l----~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I   76 (276)
T 3ngx_A            2 KILRGEEIAEKKAENLHGIIERS----GLEPSLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRI   76 (276)
T ss_dssp             CBCCCHHHHHHHHHHHHHHHHHT----TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHH
T ss_pred             EEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHH
Confidence            47999999999999999999987    799999999999999999999999999999999 9999999999999999999


Q ss_pred             HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679          155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN  234 (368)
Q Consensus       155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~  234 (368)
                      ++||+|++||||+||+|||+|+|+++++++|+|+||||||||+|.|+|+.|  .++|+||||.|++++|++|+  ++||+
T Consensus        77 ~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g--~~~~~PcTp~gv~~lL~~~~--l~Gk~  152 (276)
T 3ngx_A           77 DDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALN--REFLVPATPRAVIDIMDYYG--YHENT  152 (276)
T ss_dssp             HHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHHT--CCSCE
T ss_pred             HHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcC--CCCCCCCcHHHHHHHHHHhC--cCCCE
Confidence            999999999999999999999999999999999999999999999999987  68999999999999999999  99999


Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      |+|||||++||+|+|++|+++||+||+||++|.++++++++|||||+|+|+|++|+++|+|+|++|||+|+|+ +     
T Consensus       153 vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~-~-----  226 (276)
T 3ngx_A          153 VTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINY-V-----  226 (276)
T ss_dssp             EEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHHSSEEEECSSCTTCBCGGGCCTTCEEEECCCEE-E-----
T ss_pred             EEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhccCCEEEECCCCCccccHhhccCCcEEEEeccCc-c-----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999998 5     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                          +||++|||||+++.++|++||||||||||||++|||+|++++++++.
T Consensus       227 ----~gkl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~n~v~a~~~~~  273 (276)
T 3ngx_A          227 ----NDKVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAEFQK  273 (276)
T ss_dssp             ----TTEEECSBCHHHHHTTSSEECCTTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCceeccccHHHHhhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence                36999999999999999999999999999999999999999998654

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=100.00  E-value=5.2e-89  Score=655.50  Aligned_cols=276  Identities=42%  Similarity=0.736  Sum_probs=269.0

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      +++||||++|++|++++++++++|+++ |++|+||+|+||+||+|.+|+++|.|+|+++||+++.++||++++|+||++.
T Consensus         3 a~iidGk~ia~~i~~~~~~~v~~l~~~-g~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~   81 (281)
T 2c2x_A            3 AIMLDGKATRDEIFGDLKQRVAALDAA-GRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNET   81 (281)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHH
T ss_pred             CEEeeHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence            679999999999999999999999877 7889999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK  233 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK  233 (368)
                      |++||+|++||||+||+|||+|+|+++++++|+|+||||||||.|.|+|+.|  .++|+||||+|++++|++|+++++||
T Consensus        82 i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g--~~~~~PcTp~gi~~ll~~~~i~l~gk  159 (281)
T 2c2x_A           82 IDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLG--TPAPLPCTPRGIVHLLRRYDISIAGA  159 (281)
T ss_dssp             HHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHT--CCCCCCHHHHHHHHHHHHTTCCCTTC
T ss_pred             HHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHHHhCC--CCCCCCChHHHHHHHHHHcCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999987  57999999999999999999999999


Q ss_pred             eEEEEccCccchHHHHHHHhhC--CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS  311 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~  311 (368)
                      +|+|||+|++||+|++++|+++  |||||+|||+|.+|.+++++|||||+|+|+|++|+++|+|+|++|||+|+|+.+  
T Consensus       160 ~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~r~~--  237 (281)
T 2c2x_A          160 HVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTD--  237 (281)
T ss_dssp             EEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHHHTTCSEEEECSCCTTCBCGGGSCTTCEEEECCEEEET--
T ss_pred             EEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEccCCCCC--
Confidence            9999999999999999999999  999999999999999999999999999999999999999999999999999875  


Q ss_pred             CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHH
Q 017679          312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR  363 (368)
Q Consensus       312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~  363 (368)
                             +| ++|||| +++.++|++||||||||||||++|||+|+++++++
T Consensus       238 -------~g-lvGDVd-~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~  280 (281)
T 2c2x_A          238 -------DG-LVGDVH-PDVWELAGHVSPNPGGVGPLTRAFLLTNVVELAER  280 (281)
T ss_dssp             -------TE-EEESBC-GGGGGTCSEEECSSSSSHHHHHHHHHHHHHHHHHH
T ss_pred             -------CC-ccCccc-cchhhheeeecCCCCCccHHHHHHHHHHHHHHHHh
Confidence                   35 999999 99999999999999999999999999999999985

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=100.00  E-value=9.6e-74  Score=559.81  Aligned_cols=269  Identities=28%  Similarity=0.410  Sum_probs=249.8

Q ss_pred             cceeeeecHHHHHHHHHHHHHHHHHHHHcCC-CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH
Q 017679           72 QTATVIDGKSIAEEIRSGIDKEVRRMKKSIG-KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEV  150 (368)
Q Consensus        72 ~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g-~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el  150 (368)
                      +++++||||++|++|++++++++++|+++++ ++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++   +||
T Consensus         3 ~~~~~idgk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~l~~~---~~l   79 (320)
T 1edz_A            3 KPGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLRVIEDK---DFL   79 (320)
T ss_dssp             CCCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEEEECSSG---GGH
T ss_pred             CCCEEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEEECCchhHHHHHHHHHHHHHHcCCEEEEEECCCh---HHH
Confidence            3478999999999999999999999998744 789999999999999999999999999999999999999985   679


Q ss_pred             HHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCC-------cCccccCCHHHHHHHH
Q 017679          151 LNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGR-------EPLFIPCTPKGCIELL  223 (368)
Q Consensus       151 ~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~-------~~~~~PcTa~gv~~lL  223 (368)
                      ++.|++||+|++|||||||+|||+|+|+++++++|+|+||||||||.|.|+|+.|.+       .++|+||||+|++++|
T Consensus        80 ~~~i~~lN~d~~v~GIlvqlPlp~~~~~~~i~~~I~p~KDVDG~~~~n~g~l~~~~~~l~~~~~~~~~~PcTp~a~v~ll  159 (320)
T 1edz_A           80 EEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKIL  159 (320)
T ss_dssp             HHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTTCCBSSSSSCSBCCCCHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCcCChhhhHHHhcCCccccccccCCCcCCCcHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999997732       2689999999999999


Q ss_pred             HH---------hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC------------------C-----C--CCH
Q 017679          224 IR---------SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA------------------L-----T--KNP  269 (368)
Q Consensus       224 ~~---------~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~------------------~-----t--~~L  269 (368)
                      ++         |+++++||+|+|||+|++||+|+|++|++.||+||+|++                  .     +  .++
T Consensus       160 ~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L  239 (320)
T 1edz_A          160 EFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLL  239 (320)
T ss_dssp             HHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHH
T ss_pred             HhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHH
Confidence            99         899999999999999999999999999999999999954                  3     3  689


Q ss_pred             hhhccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHH
Q 017679          270 EQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPM  348 (368)
Q Consensus       270 ~~~~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~  348 (368)
                      ++++++|||||+|||+|++ |+.+|+|+|++|||+|+++                 |+| +++.+++++||||   ||||
T Consensus       240 ~e~l~~ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~r-----------------D~d-~~v~~~a~~itPv---VGpm  298 (320)
T 1edz_A          240 KKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTK-----------------NFS-DDVKEKASLYVPM---TGKV  298 (320)
T ss_dssp             HHHHHHCSEEEECCCCTTCCBCTTTSCTTEEEEECSSSC-----------------CBC-GGGGTTEEEEESC---CHHH
T ss_pred             HHHhccCCEEEECCCCCcceeCHHHcCCCeEEEEcCCCc-----------------ccc-hhHHhhCCeeCCC---ccHH
Confidence            9999999999999999999 9999999999999999874                 222 5677899999998   9999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 017679          349 TVAMLLSNTLDSAKRA  364 (368)
Q Consensus       349 T~amLl~N~v~a~~~~  364 (368)
                      |++|||+|+++++++.
T Consensus       299 T~a~Ll~n~~~a~~~~  314 (320)
T 1edz_A          299 TIAMLLRNMLRLVRNV  314 (320)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=99.96  E-value=2.7e-29  Score=238.63  Aligned_cols=220  Identities=15%  Similarity=0.145  Sum_probs=179.3

Q ss_pred             eCCCcccHHHHH-HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcc-c
Q 017679          112 VGERRDSQTYVR-NKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLE-K  189 (368)
Q Consensus       112 vG~d~aS~~Yv~-~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~-K  189 (368)
                      +| +|-+++|-- +++++|+++|+++.|..|+  +++++|.+.|+.++ +++++|++||+|+|.++  ..+++.++|. |
T Consensus         7 iG-~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~-~~~~~G~nVT~P~K~~~--~~~ld~~~~~A~   80 (271)
T 1nyt_A            7 FG-NPIAHSKSPFIHQQFAQQLNIEHPYGRVL--APINDFINTLNAFF-SAGGKGANVTVPFKEEA--FARADELTERAA   80 (271)
T ss_dssp             EE-SSCTTCSHHHHHHHHHHHHTCCCCEEEEE--CCTTCHHHHHHHHH-HTTCCEEEECTTCHHHH--HHHCSEECHHHH
T ss_pred             EC-CCcccccCHHHHHHHHHHCCCCcEEEEEE--cCHHHHHHHHHHHH-hCCCCeEEEccCCHHHH--HHHHhhcCHHHH
Confidence            56 677788776 9999999999999999995  46789999999999 67999999999999544  6778888895 9


Q ss_pred             ccCccCcc---eeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          190 DVDGFHPL---NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       190 DVDgl~~~---N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++++++.+   +.|++. |+      +|++.|+++.|++++++++||+++|+|+|++ |++++..|.+.|++|++++|+.
T Consensus        81 ~igavNti~~~~~g~l~-G~------ntD~~G~~~~L~~~~~~l~~k~vlViGaGg~-g~a~a~~L~~~G~~V~v~~R~~  152 (271)
T 1nyt_A           81 LAGAVNTLMRLEDGRLL-GD------NTDGVGLLSDLERLSFIRPGLRILLIGAGGA-SRGVLLPLLSLDCAVTITNRTV  152 (271)
T ss_dssp             HHTCCSEEEECTTSCEE-EE------CCHHHHHHHHHHHHTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSH
T ss_pred             HhCCceEEEEcCCCeEE-Ee------CCCHHHHHHHHHhcCcCcCCCEEEEECCcHH-HHHHHHHHHHcCCEEEEEECCH
Confidence            99999776   467774 64      4667999999999999999999999999985 9999999999999999999874


Q ss_pred             CC---Hhh--------------hc--cCCCEEEEecCCCCc-----ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEE
Q 017679          267 KN---PEQ--------------IT--SEADIVIAAAGVANL-----VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRL  322 (368)
Q Consensus       267 ~~---L~~--------------~~--~~ADIVIsAvG~p~~-----I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl  322 (368)
                      ..   +.+              .+  .++|+||+++|.+..     ++.++++++.+|+|+.|+|.+          +. 
T Consensus       153 ~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~----------t~-  221 (271)
T 1nyt_A          153 SRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGK----------TP-  221 (271)
T ss_dssp             HHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSC----------CH-
T ss_pred             HHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccCCcC----------CH-
Confidence            22   111              12  379999999996554     677889999999999998754          12 


Q ss_pred             EcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          323 MGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       323 ~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                           |....+.+|+ +|+.+|.+     ||++|.+++++.|+|.
T Consensus       222 -----~~~~a~~~G~-~~~~~G~~-----mLv~Q~~~af~~w~g~  255 (271)
T 1nyt_A          222 -----FLAWCEQRGS-KRNADGLG-----MLVAQAAHAFLLWHGV  255 (271)
T ss_dssp             -----HHHHHHHTTC-CEEECTHH-----HHHHHHHHHHHHHHSS
T ss_pred             -----HHHHHHHcCC-CeecCCHH-----HHHHHHHHHHHHHhCC
Confidence                 2333356676 33666765     9999999999999985

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=99.94  E-value=7.2e-28  Score=230.30  Aligned_cols=219  Identities=18%  Similarity=0.232  Sum_probs=177.3

Q ss_pred             EeCCCcccHHHHHHH-HHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679          111 LVGERRDSQTYVRNK-IKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E  188 (368)
Q Consensus       111 ~vG~d~aS~~Yv~~k-~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~  188 (368)
                      ++| +|.+++|...+ +++|+++|+++.|..|  ++++++|.+.|+.+|++ +++|++||+|+|+++  ..+++.+++ .
T Consensus        16 viG-~pi~hS~Sp~~h~~~~~~~gi~~~y~~~--~~~~~~l~~~i~~l~~~-~~~G~nVtiP~k~~i--~~~~d~~~~~a   89 (287)
T 1nvt_A           16 LIG-HPVEHSFSPIMHNAAFKDKGLNYVYVAF--DVLPENLKYVIDGAKAL-GIVGFNVTIPHKIEI--MKYLDEIDKDA   89 (287)
T ss_dssp             EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEE--ECCGGGGGGHHHHHHHH-TCCEEEECTTSTTGG--GGGCSEECHHH
T ss_pred             EEC-CCcccccCHHHHHHHHHHcCCCcEEEEE--EcCHHHHHHHHHHHHhC-CCCEEEEccCCHHHH--HHHHHhcCHHH
Confidence            356 78888888755 9999999999999999  45789999999999975 899999999999766  567777888 6


Q ss_pred             cccCccCcc--eeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          189 KDVDGFHPL--NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       189 KDVDgl~~~--N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++++++++  +.|++. |+      .+|+.|+++.|++++++++||+++|+|+|++ |++++..|++.| +|++++|+.
T Consensus        90 ~~igavnt~~~~~g~l~-g~------nTd~~G~~~~L~~~~~~l~~k~vlV~GaGgi-G~aia~~L~~~G-~V~v~~r~~  160 (287)
T 1nvt_A           90 QLIGAVNTIKIEDGKAI-GY------NTDGIGARMALEEEIGRVKDKNIVIYGAGGA-ARAVAFELAKDN-NIIIANRTV  160 (287)
T ss_dssp             HHHTCCCEEEEETTEEE-EE------CCHHHHHHHHHHHHHCCCCSCEEEEECCSHH-HHHHHHHHTSSS-EEEEECSSH
T ss_pred             HHhCceeeEEeeCCEEE-Ee------cCCHHHHHHHHHHhCCCcCCCEEEEECchHH-HHHHHHHHHHCC-CEEEEECCH
Confidence            999998766  466665 54      3477999999999999999999999999965 999999999999 999999874


Q ss_pred             CC---H---------------------hhhccCCCEEEEecCCCC-------cc-cCCCcCCCcEEEEeecCCCCCCCCC
Q 017679          267 KN---P---------------------EQITSEADIVIAAAGVAN-------LV-RGSWLKPGAVVLDVGTCPVDVSVDP  314 (368)
Q Consensus       267 ~~---L---------------------~~~~~~ADIVIsAvG~p~-------~I-~~e~ik~gavVIDvg~n~~~~~~d~  314 (368)
                      ..   +                     .+.+.++|+||+++|...       .+ +.++++++.+|+|++|+|.+     
T Consensus       161 ~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~-----  235 (287)
T 1nvt_A          161 EKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLE-----  235 (287)
T ss_dssp             HHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSS-----
T ss_pred             HHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCcc-----
Confidence            31   1                     234567999999998543       25 67889999999999998754     


Q ss_pred             CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                           +++.     +.+ +.+|+.  +.+|++     ||++|.+++++.|+|.
T Consensus       236 -----t~ll-----~~a-~~~G~~--~~~Gl~-----mL~~Qa~~af~~w~g~  270 (287)
T 1nvt_A          236 -----TVLL-----KEA-KKVNAK--TINGLG-----MLIYQGAVAFKIWTGV  270 (287)
T ss_dssp             -----CHHH-----HHH-HTTTCE--EECTHH-----HHHHHHHHHHHHHHSS
T ss_pred             -----CHHH-----HHH-HHCCCE--EeCcHH-----HHHHHHHHHHHHHhCC
Confidence                 2444     333 556763  345665     9999999999999985

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=99.94  E-value=1.8e-27  Score=226.34  Aligned_cols=211  Identities=15%  Similarity=0.117  Sum_probs=170.3

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCcc---e
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPL---N  198 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~---N  198 (368)
                      .+++++|+++|+++.|..|+  +++++|.+.|+.++ +++++|++||+|+|.++  .++++.++| .|++++++.+   +
T Consensus        18 ~~hn~~~~~~gl~~~y~~~~--~~~~~l~~~i~~~~-~~~~~G~nVT~P~K~~v--~~~ld~~~~~A~~igavNti~~~~   92 (272)
T 1p77_A           18 LIQNKLAAQTHQTMEYIAKL--GDLDAFEQQLLAFF-EEGAKGCNITSPFKERA--YQLADEYSQRAKLAEACNTLKKLD   92 (272)
T ss_dssp             HHHHHHHHHTTCCEEEEEEE--CCTTTHHHHHHHHH-HTTCCEEEECTTCHHHH--HHHCSEECHHHHHHTCCSEEEECT
T ss_pred             HHHHHHHHHCCcCeEEEEEE--cCHHHHHHHHHHHH-hCCCCEEEECcCCHHHH--HHHHhhcCHHHHHhCCceEEEEcc
Confidence            47999999999999999994  46789999999999 57999999999999544  778889999 5999999876   5


Q ss_pred             eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---Hh-----
Q 017679          199 IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---PE-----  270 (368)
Q Consensus       199 ~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---L~-----  270 (368)
                      .|++. |++++      +.|+++.|++++++++||+++|+|+|++ |++++..|.+.|++|++++|+...   +.     
T Consensus        93 ~g~l~-g~NTD------~~G~~~~L~~~~~~~~~~~vlvlGaGg~-g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~  164 (272)
T 1p77_A           93 DGKLY-ADNTD------GIGLVTDLQRLNWLRPNQHVLILGAGGA-TKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP  164 (272)
T ss_dssp             TSCEE-EECCH------HHHHHHHHHHTTCCCTTCEEEEECCSHH-HHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCEEE-EecCC------HHHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc
Confidence            67775 65554      5999999999999999999999999986 999999999999999999997521   11     


Q ss_pred             ---------hhc-c-CCCEEEEecCCCCc-----ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc
Q 017679          271 ---------QIT-S-EADIVIAAAGVANL-----VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL  334 (368)
Q Consensus       271 ---------~~~-~-~ADIVIsAvG~p~~-----I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~  334 (368)
                               +.+ + ++|+||+++|.+..     ++.++++++.+|+|+.|+|.+               +..|....+.
T Consensus       165 ~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~---------------~t~ll~~a~~  229 (272)
T 1p77_A          165 YGNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGT---------------DTPFIALCKS  229 (272)
T ss_dssp             GSCEEEEEGGGCCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTS---------------CCHHHHHHHH
T ss_pred             cCCeEEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCc---------------CCHHHHHHHH
Confidence                     122 3 89999999996543     556678889999999998743               1122233356


Q ss_pred             ceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          335 ASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       335 a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      +|+.|+++|      ..||+.|.+.+++.|+|.
T Consensus       230 ~G~~~~v~G------~~mLv~Qa~~af~~w~g~  256 (272)
T 1p77_A          230 LGLTNVSDG------FGMLVAQAAHSFHLWRGV  256 (272)
T ss_dssp             TTCCCEECS------HHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEeeCC------HHHHHHHHHHHHHHHhCC
Confidence            777557775      559999999999999985

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=99.94  E-value=9.3e-27  Score=224.70  Aligned_cols=219  Identities=21%  Similarity=0.254  Sum_probs=179.7

Q ss_pred             eCCCcccHHHHHH-HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679          112 VGERRDSQTYVRN-KIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK  189 (368)
Q Consensus       112 vG~d~aS~~Yv~~-k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K  189 (368)
                      +| +|.+++|... ++++|+++|+++.|..|+  +++++|.+.|+.|+. .+++|++||+|+|.++  ..+++.++| .|
T Consensus        29 iG-~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~--~~~~~l~~~v~~l~~-~~~~G~nVTiP~K~~i--~~~ld~~~~~A~  102 (297)
T 2egg_A           29 IG-FPVEHSLSPLMHNDAFARLGIPARYHLFS--VEPGQVGAAIAGVRA-LGIAGVNVTIPHKLAV--IPFLDEVDEHAR  102 (297)
T ss_dssp             EE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCTTCHHHHHHHHHH-HTCCEEEECTTCTTTT--GGGCSEECHHHH
T ss_pred             EC-CCcccccCHHHHHHHHHHcCcCcEEEEEE--cCHHHHHHHHHHHhh-CCCCeEEECCcCHHHH--HHHHHHHhHHHH
Confidence            46 6778877764 559999999999999994  467889999999984 5899999999999776  678899999 59


Q ss_pred             ccCccCcc--eeeeccccCCcCccccCCHHHHHHHHHHhC-CCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          190 DVDGFHPL--NIGNLAMRGREPLFIPCTPKGCIELLIRSG-VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       190 DVDgl~~~--N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~-i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      ++++++.+  +.|++. |+++++      .|+++.|++++ ++++||+|+|||+|++ |++++..|.+.|+ +|++++|+
T Consensus       103 ~iGavNti~~~~g~l~-g~nTd~------~G~~~~l~~~~~~~l~~~~vlVlGaGg~-g~aia~~L~~~G~~~V~v~nR~  174 (297)
T 2egg_A          103 RIGAVNTIINNDGRLV-GYNTDG------LGYVQALEEEMNITLDGKRILVIGAGGG-ARGIYFSLLSTAAERIDMANRT  174 (297)
T ss_dssp             HHTCCCEEEEETTEEE-EECCHH------HHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHTTTCSEEEEECSS
T ss_pred             HhCCCCeEECcCCeEe-eccCCH------HHHHHHHHHhCCCCCCCCEEEEECcHHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence            99999876  577776 665554      99999999998 8999999999999986 9999999999998 99999987


Q ss_pred             CC--------------------CHhhhccCCCEEEEecCCCC-------cccCCCcCCCcEEEEeecCCCCCCCCCCCCC
Q 017679          266 TK--------------------NPEQITSEADIVIAAAGVAN-------LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEY  318 (368)
Q Consensus       266 t~--------------------~L~~~~~~ADIVIsAvG~p~-------~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~  318 (368)
                      ..                    ++.+.+.++|+||++++.+.       .+..+++++|.+|+|+.|+|.+         
T Consensus       175 ~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~---------  245 (297)
T 2egg_A          175 VEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLE---------  245 (297)
T ss_dssp             HHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSS---------
T ss_pred             HHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCC---------
Confidence            31                    23455688999999998543       2567889999999999998754         


Q ss_pred             CcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          319 GYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       319 ~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                       ++|.     +.+ +.+|+ +.++|      ..||+.|.+++++.|+|.
T Consensus       246 -T~ll-----~~A-~~~G~-~~v~G------l~MLv~Qa~~af~~w~g~  280 (297)
T 2egg_A          246 -TKWL-----KEA-KARGA-RVQNG------VGMLVYQGALAFEKWTGQ  280 (297)
T ss_dssp             -CHHH-----HHH-HHTTC-EEECS------HHHHHHHHHHHHHHHHSC
T ss_pred             -CHHH-----HHH-HHCcC-EEECC------HHHHHHHHHHHHHHHhCC
Confidence             2444     444 45675 46776      559999999999999985

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=99.94  E-value=1.5e-26  Score=217.90  Aligned_cols=217  Identities=18%  Similarity=0.247  Sum_probs=180.5

Q ss_pred             EeCCCcccHHHH-HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679          111 LVGERRDSQTYV-RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E  188 (368)
Q Consensus       111 ~vG~d~aS~~Yv-~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~  188 (368)
                      ++| +|.+++|. .+++++|+++|+++.|..+  ++++++|.+.++.++.+  ++|++||+|+|+++  ..+++.+++ .
T Consensus         6 ~~G-~pi~hs~sp~~h~~~~~~~g~~~~y~~~--~~~~~~l~~~i~~l~~~--~~G~~vt~P~k~~i--~~~~~~l~~~a   78 (263)
T 2d5c_A            6 VLG-HPVAHSLSPAMHAFALESLGLEGSYEAW--DTPLEALPGRLKEVRRA--FRGVNLTLPLKEAA--LAHLDWVSPEA   78 (263)
T ss_dssp             EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEE--ECCGGGHHHHHHHHHHH--CSEEEECTTCTTGG--GGGCSEECHHH
T ss_pred             EEC-CCcccccCHHHHHHHHHHcCCCCEEEEE--eCCHHHHHHHHHhcccc--CceEEEcccCHHHH--HHHHHHHhHHH
Confidence            356 78888888 8999999999999999988  45788999999999987  99999999999766  667888999 9


Q ss_pred             cccCccCcc--eeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          189 KDVDGFHPL--NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       189 KDVDgl~~~--N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |+++|++.+  +.|++. |++++.      .|++..|++++++++| +++|||+|++ |++++..|.+.|++|++++++.
T Consensus        79 ~~~gavn~i~~~~g~~~-g~ntd~------~g~~~~l~~~~~~l~~-~v~iiG~G~~-g~~~a~~l~~~g~~v~v~~r~~  149 (263)
T 2d5c_A           79 QRIGAVNTVLQVEGRLF-GFNTDA------PGFLEALKAGGIPLKG-PALVLGAGGA-GRAVAFALREAGLEVWVWNRTP  149 (263)
T ss_dssp             HHHTCCCEEEEETTEEE-EECCHH------HHHHHHHHHTTCCCCS-CEEEECCSHH-HHHHHHHHHHTTCCEEEECSSH
T ss_pred             HHhCCCCcEEccCCeEE-EeCCCH------HHHHHHHHHhCCCCCC-eEEEECCcHH-HHHHHHHHHHCCCEEEEEECCH
Confidence            999999888  778775 544443      7999999999999999 9999999985 9999999999999999999874


Q ss_pred             C--------------CHhhhccCCCEEEEecCCC------CcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEccc
Q 017679          267 K--------------NPEQITSEADIVIAAAGVA------NLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDV  326 (368)
Q Consensus       267 ~--------------~L~~~~~~ADIVIsAvG~p------~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDV  326 (368)
                      .              ++.+. +++|+||++++..      ..+..+++++|.+|+|+++++.+          +++.   
T Consensus       150 ~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~----------t~l~---  215 (263)
T 2d5c_A          150 QRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLW----------TRFL---  215 (263)
T ss_dssp             HHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSS----------CHHH---
T ss_pred             HHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCcc----------cHHH---
Confidence            2              34455 8899999999865      33566789999999999998643          1332   


Q ss_pred             chhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          327 CYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       327 d~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                        +.+ +..++ ++++|      ..||+.|.+.+++.|+|.
T Consensus       216 --~~a-~~~g~-~~v~g------~~mlv~q~~~a~~~w~g~  246 (263)
T 2d5c_A          216 --REA-KAKGL-KVQTG------LPMLAWQGALAFRLWTGL  246 (263)
T ss_dssp             --HHH-HHTTC-EEECS------HHHHHHHHHHHHHHHHSC
T ss_pred             --HHH-HHCcC-EEECc------HHHHHHHHHHHHHHHhCC
Confidence              333 44564 57776      679999999999999985

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=99.94  E-value=2.1e-26  Score=221.76  Aligned_cols=217  Identities=18%  Similarity=0.225  Sum_probs=176.7

Q ss_pred             eCCCcccHHHH-HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679          112 VGERRDSQTYV-RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK  189 (368)
Q Consensus       112 vG~d~aS~~Yv-~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K  189 (368)
                      +| +|-++++- .+++++|+++|+++.|..|+.  ++++|.+.++.++. +++.|++|++|+|  .+..++++.++| .+
T Consensus        11 iG-~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~v~~l~~-~~~~G~nVTiP~K--~~v~~~ld~ls~~A~   84 (282)
T 3fbt_A           11 IG-EKLGHSHSSYIHKLIFEKVGIKGIYNLFEV--PKEKLKESVDTFKI-IKCGGLNVTIPYK--VEVMKELYEISEKAR   84 (282)
T ss_dssp             EE-SSCCCCHHHHHHHHHHHHHTCCEEEEEEEC--CGGGHHHHHHHHHH-TTCCEEEECTTCT--TGGGGGCSEECHHHH
T ss_pred             EC-CCccccchHHHHHHHHHHcCCCcEEEEEEC--CHHHHHHHHHHHhc-CCCCEEEEcCCCH--HHHHHHHHhcCHHHH
Confidence            45 45566555 477799999999999999954  66899999999987 6899999999999  666788999999 69


Q ss_pred             ccCccCcce--eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679          190 DVDGFHPLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT  266 (368)
Q Consensus       190 DVDgl~~~N--~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t  266 (368)
                      .+++++.+.  -|++. |+++++      .|+++.|++++++++||+|+|+|+|++ |++++..|.+.|+ +|++++|+.
T Consensus        85 ~iGAVNTv~~~~g~l~-G~NTD~------~G~~~~L~~~~~~~~~k~vlvlGaGGa-araia~~L~~~G~~~v~v~nRt~  156 (282)
T 3fbt_A           85 KIGAVNTLKFSREGIS-GFNTDY------IGFGKMLSKFRVEIKNNICVVLGSGGA-ARAVLQYLKDNFAKDIYVVTRNP  156 (282)
T ss_dssp             HHTCCCEEEECSSCEE-EECCHH------HHHHHHHHHTTCCCTTSEEEEECSSTT-HHHHHHHHHHTTCSEEEEEESCH
T ss_pred             HcCCcceEEeeCCEEE-eeCCcH------HHHHHHHHHcCCCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCH
Confidence            999987654  36664 666665      999999999999999999999999997 9999999999998 999999874


Q ss_pred             CC---------------HhhhccCCCEEEEecCC---CC----cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEc
Q 017679          267 KN---------------PEQITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMG  324 (368)
Q Consensus       267 ~~---------------L~~~~~~ADIVIsAvG~---p~----~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~G  324 (368)
                      ..               +.+ + ++|+||++|+.   |+    .++.++++++.+|+|+.|+|.+          +.|. 
T Consensus       157 ~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~----------T~ll-  223 (282)
T 3fbt_A          157 EKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVE----------TLFL-  223 (282)
T ss_dssp             HHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSS----------CHHH-
T ss_pred             HHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCC----------CHHH-
Confidence            22               122 3 89999999953   43    3677889999999999999965          3555 


Q ss_pred             ccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          325 DVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       325 DVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                          ..+ +..|+  ++-+|.+     ||+.|.+++++.|+|.
T Consensus       224 ----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~  254 (282)
T 3fbt_A          224 ----KYA-RESGV--KAVNGLY-----MLVSQAAASEEIWNDI  254 (282)
T ss_dssp             ----HHH-HHTTC--EEECSHH-----HHHHHHHHHHHHHHTC
T ss_pred             ----HHH-HHCcC--eEeCcHH-----HHHHHHHHHHHHHcCC
Confidence                555 45676  3445666     9999999999999985

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=99.93  E-value=5.3e-26  Score=216.33  Aligned_cols=218  Identities=17%  Similarity=0.264  Sum_probs=180.3

Q ss_pred             EeCCCcccHHHHH-HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679          111 LVGERRDSQTYVR-NKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E  188 (368)
Q Consensus       111 ~vG~d~aS~~Yv~-~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~  188 (368)
                      ++| +|.|++|.. +++++|+++|+++.|..++  +++++|.+.|+.++. ++++|++||+|+|.++  ..+++.+++ .
T Consensus        17 liG-~pi~hs~sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~~-~~~~G~nvtiP~k~~i--~~~ld~l~~~A   90 (275)
T 2hk9_A           17 VIG-FPVKHSLSPVFQNALIRYAGLNAVYLAFE--INPEELKKAFEGFKA-LKVKGINVTVPFKEEI--IPLLDYVEDTA   90 (275)
T ss_dssp             EEE-SSCTTCSHHHHHHHHHHHHTCSEEEEEEE--CCGGGHHHHHHHHHH-HTCCEEEECTTSTTTT--GGGCSEECHHH
T ss_pred             EEC-CCcccccCHHHHHHHHHHcCCCcEEEEEE--CCHHHHHHHHHHHHh-CCCCEEEECccCHHHH--HHHHHHhhHHH
Confidence            578 999999996 7789999999999999995  578899999999995 6899999999999765  667888888 5


Q ss_pred             cccCccCcc--eeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          189 KDVDGFHPL--NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       189 KDVDgl~~~--N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |++++++.+  +.|++. |+      ++++.|++..|++++++++|++++|||+|++ |++++..|.+.|++|++++++.
T Consensus        91 ~~~gavnti~~~~g~~~-g~------nTd~~G~~~~l~~~~~~~~~~~v~iiGaG~~-g~aia~~L~~~g~~V~v~~r~~  162 (275)
T 2hk9_A           91 KEIGAVNTVKFENGKAY-GY------NTDWIGFLKSLKSLIPEVKEKSILVLGAGGA-SRAVIYALVKEGAKVFLWNRTK  162 (275)
T ss_dssp             HHHTCCCEEEEETTEEE-EE------CCHHHHHHHHHHHHCTTGGGSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSH
T ss_pred             HHhCCcceEEeeCCEEE-ee------cCCHHHHHHHHHHhCCCcCCCEEEEECchHH-HHHHHHHHHHcCCEEEEEECCH
Confidence            999999776  456664 43      4677999999999999999999999999986 9999999999999999999863


Q ss_pred             C---------------CHhhhccCCCEEEEecCCCC------cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcc
Q 017679          267 K---------------NPEQITSEADIVIAAAGVAN------LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGD  325 (368)
Q Consensus       267 ~---------------~L~~~~~~ADIVIsAvG~p~------~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GD  325 (368)
                      .               ++.+.++++|+||++++...      .++.+++++|.+|+|+++  ..          .++.  
T Consensus       163 ~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~--~~----------t~ll--  228 (275)
T 2hk9_A          163 EKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY--KE----------TKLL--  228 (275)
T ss_dssp             HHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS--SC----------CHHH--
T ss_pred             HHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC--Ch----------HHHH--
Confidence            1               56677889999999998542      355678899999999998  22          2333  


Q ss_pred             cchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          326 VCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       326 Vd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                         +.+ +..++ +.+||      ..||+.|.+.++++|+|.
T Consensus       229 ---~~a-~~~g~-~~v~g------~~mlv~q~~~a~~~w~g~  259 (275)
T 2hk9_A          229 ---KKA-KEKGA-KLLDG------LPMLLWQGIEAFKIWNGC  259 (275)
T ss_dssp             ---HHH-HHTTC-EEECS------HHHHHHHHHHHHHHHHCC
T ss_pred             ---HHH-HHCcC-EEECC------HHHHHHHHHHHHHHHHCC
Confidence               344 33454 46777      679999999999999985

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=99.92  E-value=2.6e-25  Score=217.10  Aligned_cols=220  Identities=20%  Similarity=0.258  Sum_probs=175.8

Q ss_pred             EeCCCcccHHHH-HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679          111 LVGERRDSQTYV-RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E  188 (368)
Q Consensus       111 ~vG~d~aS~~Yv-~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~  188 (368)
                      ++| +|-++++- .+++.+|+++|+++.|..|+  +++++|.+.++.++. +++.|++|++|+|  .+..++++.++| .
T Consensus        42 viG-~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~--v~~~~l~~~~~~l~~-~~~~G~nVTiP~K--~~v~~~lD~ls~~A  115 (315)
T 3tnl_A           42 LIA-TPIRHSLSPTMHNEAFAKLGLDYVYLAFE--VGDKELKDVVQGFRA-MNLRGWNVSMPNK--TNIHKYLDKLSPAA  115 (315)
T ss_dssp             EEE-SSCTTCSHHHHHHHHHHHHTCCEEEEEEE--CCHHHHHHHHHHHHH-TTCCEEEECTTST--TTGGGGCSEECHHH
T ss_pred             EEC-CCccccccHHHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHhc-CCCCEEEEcCCCh--HHHHHHHHhcCHHH
Confidence            356 34444433 47788999999999999994  478899999999986 6899999999999  566788899999 6


Q ss_pred             cccCccCcce--eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          189 KDVDGFHPLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       189 KDVDgl~~~N--~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      +.+.+++.+.  -|++. |++++      ..|+++.|++++++++||+|+|+|+|++ |++++..|.+.|+ +|++++|+
T Consensus       116 ~~iGAVNTi~~~~g~l~-G~NTD------~~Gf~~~L~~~~~~l~gk~~lVlGaGG~-g~aia~~L~~~Ga~~V~i~nR~  187 (315)
T 3tnl_A          116 ELVGAVNTVVNDDGVLT-GHITD------GTGYMRALKEAGHDIIGKKMTICGAGGA-ATAICIQAALDGVKEISIFNRK  187 (315)
T ss_dssp             HHHTCCSEEEEETTEEE-EECCH------HHHHHHHHHHTTCCCTTSEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECS
T ss_pred             HHhCccceEEecCCEEE-EeCCC------HHHHHHHHHHcCCCccCCEEEEECCChH-HHHHHHHHHHCCCCEEEEEECC
Confidence            9998886543  35554 66555      4999999999999999999999999987 9999999999998 99999998


Q ss_pred             CC-----------------------------CHhhhccCCCEEEEecCC---CC----cc-cCCCcCCCcEEEEeecCCC
Q 017679          266 TK-----------------------------NPEQITSEADIVIAAAGV---AN----LV-RGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       266 t~-----------------------------~L~~~~~~ADIVIsAvG~---p~----~I-~~e~ik~gavVIDvg~n~~  308 (368)
                      .+                             ++.+.+.++|+||++|+.   |+    .+ ..++++++.+|+|+.|+|.
T Consensus       188 ~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~  267 (315)
T 3tnl_A          188 DDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPT  267 (315)
T ss_dssp             STTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSS
T ss_pred             CchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCC
Confidence            21                             123446789999999963   33    35 6778999999999999986


Q ss_pred             CCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          309 DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       309 ~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      +          ++|.     ..+ +..|+  ++-+|.+     ||++|.+++++.|+|.
T Consensus       268 ~----------T~ll-----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~af~lwtG~  303 (315)
T 3tnl_A          268 K----------TRLL-----EIA-EEQGC--QTLNGLG-----MMLWQGAKAFEIWTHK  303 (315)
T ss_dssp             S----------CHHH-----HHH-HHTTC--EEECSHH-----HHHHHHHHHHHHHHSS
T ss_pred             C----------CHHH-----HHH-HHCCC--eEeCcHH-----HHHHHHHHHHHHHhCC
Confidence            5          3555     555 45676  4456666     9999999999999985

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=99.90  E-value=9.5e-24  Score=202.95  Aligned_cols=211  Identities=17%  Similarity=0.176  Sum_probs=167.5

Q ss_pred             HHHHHHHHHcCCeEEEEEcCC---CCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCcc-
Q 017679          123 RNKIKACEEVGIKSIVTEFAD---GCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPL-  197 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~---~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~-  197 (368)
                      .+++.+++++|+++.|..|+.   +++.++|.+.++.+.. +++.|++|++|++  .+..++++.+++ .+-+.+++.+ 
T Consensus        21 ~~hn~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~-~~~~G~nVTiP~K--~~v~~~lD~l~~~A~~iGAVNTv~   97 (283)
T 3jyo_A           21 AMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALY-LGFNGLNITHPYK--QAVLPLLDEVSEQATQLGAVNTVV   97 (283)
T ss_dssp             HHHHHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHH-TTCCEEEECTTCT--TTTGGGSSEECHHHHHHTCCCEEE
T ss_pred             HHHHHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhh-CCCCEEEECcccH--HHHHHHhhhCCHHHHHhCcceEEE
Confidence            589999999999999999843   2455678888888765 6899999999998  444667788888 6777666432 


Q ss_pred             e--eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC-------
Q 017679          198 N--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-------  267 (368)
Q Consensus       198 N--~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~-------  267 (368)
                      +  -|++. |+++++      .|+++.|++.+.+++||+|+|+|+|++ |++++..|.+.|+ +|++++|+..       
T Consensus        98 ~~~~g~l~-G~NTD~------~G~~~~l~~~~~~l~~k~vlVlGaGG~-g~aia~~L~~~G~~~v~i~~R~~~~a~~la~  169 (283)
T 3jyo_A           98 IDATGHTT-GHNTDV------SGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVADLDTSRAQALAD  169 (283)
T ss_dssp             ECTTSCEE-EECHHH------HHHHHHHHHHCTTCCCSEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSSHHHHHHHHH
T ss_pred             ECCCCeEE-EecCCH------HHHHHHHHHhCcCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEECCHHHHHHHHH
Confidence            3  24554 665555      999999999999999999999999987 9999999999998 7999988631       


Q ss_pred             -----------------CHhhhccCCCEEEEecCC---CC---cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEc
Q 017679          268 -----------------NPEQITSEADIVIAAAGV---AN---LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMG  324 (368)
Q Consensus       268 -----------------~L~~~~~~ADIVIsAvG~---p~---~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~G  324 (368)
                                       ++.+.++++|+||++|+.   |+   .++.++++++.+|+|+.|+|.+          +.|. 
T Consensus       170 ~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~----------T~ll-  238 (283)
T 3jyo_A          170 VINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIE----------TELL-  238 (283)
T ss_dssp             HHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSS----------CHHH-
T ss_pred             HHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCC----------CHHH-
Confidence                             444566789999999963   22   3678899999999999999865          3555 


Q ss_pred             ccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          325 DVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       325 DVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                          ..+ +..|+  ++-+|.+     ||++|.+++++.|+|.
T Consensus       239 ----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~  269 (283)
T 3jyo_A          239 ----KAA-RALGC--ETLDGTR-----MAIHQAVDAFRLFTGL  269 (283)
T ss_dssp             ----HHH-HHHTC--CEECTHH-----HHHHHHHHHHHHHHSC
T ss_pred             ----HHH-HHCcC--eEeCcHH-----HHHHHHHHHHHHHcCC
Confidence                555 45676  4556676     9999999999999985

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=99.90  E-value=5.9e-24  Score=204.02  Aligned_cols=209  Identities=16%  Similarity=0.155  Sum_probs=163.9

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCcc-e-e
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPL-N-I  199 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~-N-~  199 (368)
                      .+++.+++++|+++.|..|+.  .+++|.+.++.+.. .++.|++|++|++  .+...+++.++| .+-+.+++.+ + -
T Consensus        17 ~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~K--~~v~~~~d~l~~~A~~iGAVNTv~~~~   91 (277)
T 3don_A           17 LMHHANFQSLNLENTYEAINV--PVNQFQDIKKIISE-KSIDGFNVTIPHK--ERIIPYLDDINEQAKSVGAVNTVLVKD   91 (277)
T ss_dssp             HHHHHHHHHTTCCCEEEEEEC--CGGGGGGHHHHHHH-TTCSEEEECTTCT--TTTGGGCSEECHHHHHHTCCCEEEEET
T ss_pred             HHHHHHHHHcCcCcEEEEEEc--CHHHHHHHHHHHhh-CCCCEEEECcCCH--HHHHHHhhhCCHHHHHhCceeEEEecC
Confidence            478999999999999999854  56678788887765 4799999999998  444667777887 6666665432 2 3


Q ss_pred             eeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC-----------
Q 017679          200 GNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------  267 (368)
Q Consensus       200 G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~-----------  267 (368)
                      |++. |++++      ..|+++.|++.+++++||+++|+|+|++ |++++..|.+.|+ +|++++|+..           
T Consensus        92 g~l~-G~NTD------~~G~~~~L~~~~~~l~~k~vlvlGaGg~-g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~  163 (277)
T 3don_A           92 GKWI-GYNTD------GIGYVNGLKQIYEGIEDAYILILGAGGA-SKGIANELYKIVRPTLTVANRTMSRFNNWSLNINK  163 (277)
T ss_dssp             TEEE-EECCH------HHHHHHHHHHHSTTGGGCCEEEECCSHH-HHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEE
T ss_pred             CEEE-EECCh------HHHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhccc
Confidence            4444 65555      4999999999999999999999999987 9999999999998 8999998742           


Q ss_pred             ----CHhhhccCCCEEEEecCC---CC---cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceE
Q 017679          268 ----NPEQITSEADIVIAAAGV---AN---LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASV  337 (368)
Q Consensus       268 ----~L~~~~~~ADIVIsAvG~---p~---~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~  337 (368)
                          ++.+.+.++|+||++|+.   |+   .++.++++++.+|+|+.|+|.+          ++|.     +.+ +..|+
T Consensus       164 ~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~----------T~ll-----~~A-~~~G~  227 (277)
T 3don_A          164 INLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYK----------TPIL-----IEA-EQRGN  227 (277)
T ss_dssp             ECHHHHHHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSS----------CHHH-----HHH-HHTTC
T ss_pred             ccHhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCC----------CHHH-----HHH-HHCcC
Confidence                234557899999999874   32   2577889999999999999864          2343     444 55675


Q ss_pred             eccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          338 ITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       338 iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                        .+-+|.+     ||+.|.+.+++.|+|.
T Consensus       228 --~~~~Gl~-----MLv~Qa~~~f~lwtg~  250 (277)
T 3don_A          228 --PIYNGLD-----MFVHQGAESFKIWTNL  250 (277)
T ss_dssp             --CEECTHH-----HHHHHHHHHHHHHHSS
T ss_pred             --EEeCCHH-----HHHHHHHHHHHHHcCC
Confidence              4455666     9999999999999985

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=99.89  E-value=1e-23  Score=202.57  Aligned_cols=222  Identities=14%  Similarity=0.146  Sum_probs=166.3

Q ss_pred             EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679          111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK  189 (368)
Q Consensus       111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K  189 (368)
                      ++|+.-+-..-=.+++.+++++|+++.|..|+.  +.++|.+.++.+.. .++.|++|++|++  .+...+++.++| .+
T Consensus        13 viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~K--~~v~~~ld~l~~~A~   87 (281)
T 3o8q_A           13 VFGNPINHSKSPFIHTLFARQTQQSMIYTAQCV--PVDGFTEAAKHFFA-QGGRGCNVTVPFK--EEAYRFADRLTERAR   87 (281)
T ss_dssp             EECCSSSCCCHHHHHHHHHHHTTCCEEEEEECC--CTTCHHHHHHHHHH-TTCCEEEECTTSH--HHHHHHCSEECHHHH
T ss_pred             EECCCCCccCcHHHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHHh-CCCCEEEECCccH--HHHHHHHhhcCHHHH
Confidence            356543222223589999999999999999854  55778888888875 5899999999998  344555666666 56


Q ss_pred             ccCccCcc--e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          190 DVDGFHPL--N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       190 DVDgl~~~--N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      -+.+++.+  + -|++. |++++      ..|+++.|++.+++++||+++|+|+|++ |++++..|.+.|+ +|++++|+
T Consensus        88 ~iGAVNTv~~~~~g~l~-G~NTD------~~G~~~~L~~~~~~l~~k~vlvlGaGg~-g~aia~~L~~~G~~~v~v~~R~  159 (281)
T 3o8q_A           88 LAGAVNTLKKLDDGEIL-GDNTD------GEGLVQDLLAQQVLLKGATILLIGAGGA-ARGVLKPLLDQQPASITVTNRT  159 (281)
T ss_dssp             HHTCCSEEEECTTSCEE-EECCH------HHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHTTCCSEEEEEESS
T ss_pred             hhCeeeEEEEcCCCcEE-EEecH------HHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHhcCCCeEEEEECC
Confidence            66555432  1 24444 55555      4999999999999999999999999987 9999999999996 99999997


Q ss_pred             CCCH------------------hhhccCCCEEEEecCCCC-----cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEE
Q 017679          266 TKNP------------------EQITSEADIVIAAAGVAN-----LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRL  322 (368)
Q Consensus       266 t~~L------------------~~~~~~ADIVIsAvG~p~-----~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl  322 (368)
                      ....                  .+...++|+||++|+...     .++.++++++.+|+|+.|+|.+          ++|
T Consensus       160 ~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~----------T~l  229 (281)
T 3o8q_A          160 FAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGY----------TVF  229 (281)
T ss_dssp             HHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSC----------CHH
T ss_pred             HHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCcc----------CHH
Confidence            4221                  122267999999997531     3677899999999999999854          245


Q ss_pred             EcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          323 MGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       323 ~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      .     ..+ +..|+- .+-+|.+     ||++|.+++++.|+|.
T Consensus       230 l-----~~A-~~~G~~-~~~~Gl~-----Mlv~Qa~~~f~lwtg~  262 (281)
T 3o8q_A          230 N-----QWA-RQHGCA-QAIDGLG-----MLVGQAAESFMLWRGL  262 (281)
T ss_dssp             H-----HHH-HHTTCS-EEECTHH-----HHHHHHHHHHHHHHSC
T ss_pred             H-----HHH-HHCCCC-EEECcHH-----HHHHHHHHHHHHHhCC
Confidence            4     455 445652 1445666     9999999999999985

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=99.89  E-value=1e-23  Score=201.68  Aligned_cols=210  Identities=13%  Similarity=0.102  Sum_probs=161.0

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCcc-e-e
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPL-N-I  199 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~-N-~  199 (368)
                      .+++.+++++|+++.|..++.  ..++|.+.++.+.. +++.|++|++|++  .+..++++.+++ .+-+.+++.+ + -
T Consensus        19 ~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~K--~~v~~~~d~l~~~A~~iGAvNTv~~~~   93 (272)
T 3pwz_A           19 LIHGLFAQASNQQLEYGAIEG--SLDDFEAQVLQFRS-EGGKGMNITAPFK--LRAFELADRRSERAQLARAANALKFED   93 (272)
T ss_dssp             HHHHHHHHHTTCCEEEEEEEC--CTTTHHHHHHHHHH-TTCCEEEECTTCH--HHHHHHCSEECHHHHHHTCCSEEEEET
T ss_pred             HHHHHHHHHcCCCcEEEEEEc--CHHHHHHHHHHHhh-CCCCEEEECchhH--HHHHHHHhhCCHHHHHhCccceEEccC
Confidence            489999999999999998854  45678888888875 6899999999998  344556666666 5665555322 2 2


Q ss_pred             eeccccCCcCccccCCHHHHHHH-HHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCCCHh-------
Q 017679          200 GNLAMRGREPLFIPCTPKGCIEL-LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTKNPE-------  270 (368)
Q Consensus       200 G~L~~g~~~~~~~PcTa~gv~~l-L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~~L~-------  270 (368)
                      |++. |++++      ..|+++. |++.+++++||+++|+|+|++ |++++..|.+.|+ +|++++|+....+       
T Consensus        94 g~l~-G~NTD------~~G~~~~lL~~~~~~l~~k~~lvlGaGg~-~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A           94 GRIV-AENFD------GIGLLRDIEENLGEPLRNRRVLLLGAGGA-VRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             TEEE-EECCH------HHHHHHHHHTTSCCCCTTSEEEEECCSHH-HHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CeEE-EecCC------HHHHHHHHHHHcCCCccCCEEEEECccHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            3443 55555      4999996 998999999999999999987 9999999999996 9999998742211       


Q ss_pred             ----------hhc-cCCCEEEEecCCC---C--cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc
Q 017679          271 ----------QIT-SEADIVIAAAGVA---N--LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL  334 (368)
Q Consensus       271 ----------~~~-~~ADIVIsAvG~p---~--~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~  334 (368)
                                +.- .++|+||++|+..   +  .++.++++++.+|+|+.|+|.+          ++|.     ..+ +.
T Consensus       166 ~~~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~----------T~ll-----~~A-~~  229 (272)
T 3pwz_A          166 HSRLRISRYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGL----------TPFL-----RLA-RE  229 (272)
T ss_dssp             CTTEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCS----------CHHH-----HHH-HH
T ss_pred             cCCeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCC----------CHHH-----HHH-HH
Confidence                      111 6899999999742   1  3678899999999999999865          2454     455 55


Q ss_pred             ceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          335 ASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       335 a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      .|+- .+-+|.+     ||++|.+++++.|+|.
T Consensus       230 ~G~~-~~~~Gl~-----ML~~Qa~~~f~lwtg~  256 (272)
T 3pwz_A          230 QGQA-RLADGVG-----MLVEQAAEAFAWWRGV  256 (272)
T ss_dssp             HSCC-EEECTHH-----HHHHHHHHHHHHHHSC
T ss_pred             CCCC-EEECCHH-----HHHHHHHHHHHHHhCC
Confidence            6652 1445666     9999999999999985

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=99.88  E-value=4.2e-23  Score=201.24  Aligned_cols=220  Identities=19%  Similarity=0.200  Sum_probs=165.5

Q ss_pred             eCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccc
Q 017679          112 VGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKD  190 (368)
Q Consensus       112 vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KD  190 (368)
                      +|+.-+-..-=.+++.+++++|+++.|..|+.  .+++|.+.++.+.. .++.|++|++|++  .+..++++.++| .+-
T Consensus        37 iG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~K--~~v~~~lD~ls~~A~~  111 (312)
T 3t4e_A           37 MAYPIRHSLSPEMQNKALEKAGLPYTYMAFEV--DNTTFASAIEGLKA-LKMRGTGVSMPNK--QLACEYVDELTPAAKL  111 (312)
T ss_dssp             EESCCTTCSHHHHHHHHHHHHTCSEEEEEEEC--CTTTHHHHHHHHHH-TTCCEEEECTTSH--HHHGGGCSEECHHHHH
T ss_pred             ECCCccccccHHHHHHHHHHcCCCcEEEeEec--CHHHHHHHHHHHhh-CCCCEEEECchhH--HHHHHHhhhcCHHHHH
Confidence            46443222233589999999999999999854  55678888888876 4799999999998  333445555555 555


Q ss_pred             cCccCc-ce-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC
Q 017679          191 VDGFHP-LN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK  267 (368)
Q Consensus       191 VDgl~~-~N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~  267 (368)
                      +.+++. ++ -|++. |+++++      .|+++.|++.+++++||+|+|+|+|++ |++++..|.+.|+ +|+|++|+..
T Consensus       112 iGAVNTi~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~l~gk~~lVlGAGGa-araia~~L~~~G~~~v~v~nRt~~  183 (312)
T 3t4e_A          112 VGAINTIVNDDGYLR-GYNTDG------TGHIRAIKESGFDMRGKTMVLLGAGGA-ATAIGAQAAIEGIKEIKLFNRKDD  183 (312)
T ss_dssp             HTCCSEEEEETTEEE-EECHHH------HHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECSST
T ss_pred             hCceeEEEecCCEEE-EeCCcH------HHHHHHHHhcCCCcCCCEEEEECcCHH-HHHHHHHHHHcCCCEEEEEECCCc
Confidence            555532 22 34444 655555      999999999999999999999999997 9999999999998 8999999821


Q ss_pred             --------------------------CH---hhhccCCCEEEEecCC---CC---cc--cCCCcCCCcEEEEeecCCCCC
Q 017679          268 --------------------------NP---EQITSEADIVIAAAGV---AN---LV--RGSWLKPGAVVLDVGTCPVDV  310 (368)
Q Consensus       268 --------------------------~L---~~~~~~ADIVIsAvG~---p~---~I--~~e~ik~gavVIDvg~n~~~~  310 (368)
                                                ++   .+.+.++|+||++|+.   |.   .+  +.++++++.+|+|+.|+|.+ 
T Consensus       184 ~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~-  262 (312)
T 3t4e_A          184 FFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHM-  262 (312)
T ss_dssp             HHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSS-
T ss_pred             hHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCC-
Confidence                                      11   3346789999999874   22   12  55789999999999999965 


Q ss_pred             CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                               ++|.     ..+ +..|+  ++-+|.+     ||++|.+++++.|+|.
T Consensus       263 ---------T~ll-----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~af~lwtg~  297 (312)
T 3t4e_A          263 ---------TKLL-----QQA-QQAGC--KTIDGYG-----MLLWQGAEQFELWTGK  297 (312)
T ss_dssp             ---------CHHH-----HHH-HHTTC--EEECHHH-----HHHHHHHHHHHHHHSS
T ss_pred             ---------CHHH-----HHH-HHCCC--eEECcHH-----HHHHHHHHHHHHHhCC
Confidence                     3565     555 45676  4456677     9999999999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=99.84  E-value=1e-21  Score=187.96  Aligned_cols=202  Identities=15%  Similarity=0.141  Sum_probs=150.0

Q ss_pred             HHHHHHH----HHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCcc
Q 017679          123 RNKIKAC----EEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPL  197 (368)
Q Consensus       123 ~~k~k~a----~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~  197 (368)
                      .+++.++    +++|+++.|..++.    +++.+.++.+.. .++.|++|++|++  .+..++++.++| .+-+.+++.+
T Consensus        20 ~~hn~~f~~~~~~~gl~~~Y~~~~v----~~l~~~~~~~~~-~~~~G~nVTiP~K--~~v~~~~d~l~~~A~~iGAVNTi   92 (269)
T 3phh_A           20 LIHNACFLTFQKELRFLGHYHPILL----PLESHIKSEFLH-LGLSGANVTLPFK--ERAFQVCDKIKGIALECGAVNTL   92 (269)
T ss_dssp             HHHHHHHHHHHHHHSSEEEEEEEEC----CSSSCHHHHHHH-TTEEEEEECTTCH--HHHHHHSSEECGGGGGTTCCCEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEeeEEh----hhHHHHHHHHhh-CCCCEEEEccccH--HHHHHHHhhcCHHHHHhCceeEE
Confidence            4788999    99999999999865    345555666654 6799999999998  444556666666 5555554322


Q ss_pred             -e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhh---
Q 017679          198 -N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI---  272 (368)
Q Consensus       198 -N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~---  272 (368)
                       + -|++. |++++      ..|+++.|++.+    ||+++|||+|++ |++++..|.+.|++|++++|+....++.   
T Consensus        93 ~~~~g~l~-G~NTD------~~Gf~~~L~~~~----~k~vlvlGaGGa-araia~~L~~~G~~v~V~nRt~~ka~~la~~  160 (269)
T 3phh_A           93 VLENDELV-GYNTD------ALGFYLSLKQKN----YQNALILGAGGS-AKALACELKKQGLQVSVLNRSSRGLDFFQRL  160 (269)
T ss_dssp             EEETTEEE-EECCH------HHHHHHHCC-------CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCTTHHHHHHH
T ss_pred             EeeCCEEE-EecCh------HHHHHHHHHHcC----CCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence             2 24443 55544      499999998755    999999999997 9999999999999999999987554332   


Q ss_pred             ---------ccCCCEEEEecCCC---C-cccCC----CcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccc
Q 017679          273 ---------TSEADIVIAAAGVA---N-LVRGS----WLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLA  335 (368)
Q Consensus       273 ---------~~~ADIVIsAvG~p---~-~I~~e----~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a  335 (368)
                               +.++|+||++|+..   + .++.+    .++++.+|+|+.|+| +          ++|.     +.+ +..
T Consensus       161 ~~~~~~~~~l~~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P-~----------T~ll-----~~A-~~~  223 (269)
T 3phh_A          161 GCDCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF-L----------TPFL-----SLA-KEL  223 (269)
T ss_dssp             TCEEESSCCSSCCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS-C----------CHHH-----HHH-HHT
T ss_pred             CCeEecHHHhccCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC-c----------hHHH-----HHH-HHC
Confidence                     23799999998742   2 35656    678899999999998 7          2444     445 456


Q ss_pred             eEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          336 SVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       336 ~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      |+  ++-+|.+     ||+.|.+++++.|+|.
T Consensus       224 G~--~~~~Gl~-----MLv~Qa~~~f~lw~g~  248 (269)
T 3phh_A          224 KT--PFQDGKD-----MLIYQAALSFEKFSAS  248 (269)
T ss_dssp             TC--CEECSHH-----HHHHHHHHHHHHHTTT
T ss_pred             cC--EEECCHH-----HHHHHHHHHHHHHhCC
Confidence            75  4556666     9999999999999985

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=99.84  E-value=3.9e-21  Score=183.70  Aligned_cols=217  Identities=14%  Similarity=0.222  Sum_probs=163.5

Q ss_pred             EEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679          110 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E  188 (368)
Q Consensus       110 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~  188 (368)
                      -++|+. .|.+=. +++.+++++|+++.|..++    +++|.+.++.+.. .++.|++|++|++..+  ..+++.+++ .
T Consensus        11 ~viG~P-hS~SP~-~hn~~~~~~gl~~~Y~~~~----~~~l~~~~~~~~~-~~~~G~nVTiP~K~~i--~~~~d~~~~~A   81 (271)
T 1npy_A           11 SLSGRP-SNFGTT-FHNYLYDKLGLNFIYKAFT----TQDIEHAIKGVRA-LGIRGCAVSMPFKETC--MPFLDEIHPSA   81 (271)
T ss_dssp             EECSSC-CSHHHH-HHHHHHHHHTCCEEEEEEC----CSCHHHHHHHHHH-HTCCEEEECTTCTTTT--GGGCSEECHHH
T ss_pred             EEECCC-CcccHH-HHHHHHHHcCCCcEEEeec----hhhHHHHHHHhcc-CCCCeEEECcCCHHHH--HHHHHHhhHHH
Confidence            357876 777764 8999999999999999997    2456666666665 3689999999999443  567777777 6


Q ss_pred             cccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          189 KDVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       189 KDVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      +.+.+++.+ | .|++. |+++++      .|++..|++.+.+ .+|+|+|||+|++ |++++..|...|+ +|+|++|+
T Consensus        82 ~~iGAvNTi~~~~g~l~-g~NTD~------~G~~~~l~~~~~~-~~~~vlvlGaGga-arav~~~L~~~G~~~i~v~nRt  152 (271)
T 1npy_A           82 QAIESVNTIVNDNGFLR-AYNTDY------IAIVKLIEKYHLN-KNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKIYARN  152 (271)
T ss_dssp             HTTTCCCEEEEETTEEE-EECHHH------HHHHHHHHHTTCC-TTSCEEEECSSTT-HHHHHHHHHHTTCCCEEEECSC
T ss_pred             HHhCCCCceECcCCEEE-eecCCH------HHHHHHHHHhCCC-CCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence            777666433 3 34554 655554      9999999988775 7899999999998 9999999999997 79999997


Q ss_pred             CCC---Hh---------h-hccCCCEEEEecCCCC--------c-ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEE
Q 017679          266 TKN---PE---------Q-ITSEADIVIAAAGVAN--------L-VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLM  323 (368)
Q Consensus       266 t~~---L~---------~-~~~~ADIVIsAvG~p~--------~-I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~  323 (368)
                      ...   +.         + .+.++|+||++|+...        . ++.++++++.+|+|+.|+|.+          +.|.
T Consensus       153 ~~ka~~la~~~~~~~~~~~~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~----------T~ll  222 (271)
T 1npy_A          153 VKTGQYLAALYGYAYINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVE----------TPFI  222 (271)
T ss_dssp             HHHHHHHHHHHTCEEESCCTTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSS----------CHHH
T ss_pred             HHHHHHHHHHcCCccchhhhcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCC----------CHHH
Confidence            421   11         0 1367999999998532        1 344567789999999998864          2444


Q ss_pred             cccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          324 GDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       324 GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                           +.+ +..|+-  +-+|.+     ||+.|.+++++.|+|.
T Consensus       223 -----~~A-~~~G~~--~i~Gl~-----MLv~Qa~~~f~lw~g~  253 (271)
T 1npy_A          223 -----RYA-QARGKQ--TISGAA-----VIVLQAVEQFELYTHQ  253 (271)
T ss_dssp             -----HHH-HHTTCE--EECHHH-----HHHHHHHHHHHHHHSC
T ss_pred             -----HHH-HHCCCE--EECCHH-----HHHHHHHHHHHHHhCC
Confidence                 444 456753  345666     9999999999999985

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=99.82  E-value=1.3e-20  Score=178.50  Aligned_cols=200  Identities=15%  Similarity=0.123  Sum_probs=153.6

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCcceeee
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPLNIGN  201 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~N~G~  201 (368)
                      .+++.+++++|+++.|..++.  ++++|.+.++.+.  +++.|++|++|++  .+..++++. +| .+-+.+   +|+-.
T Consensus        17 ~~hn~~~~~~gl~~~Y~~~~v--~~~~l~~~~~~~~--~~~~G~nVT~P~K--~~v~~~~d~-~~~A~~iGA---vNTi~   86 (253)
T 3u62_A           17 RLYNEYFKRAGMNHSYGMEEI--PPESFDTEIRRIL--EEYDGFNATIPHK--ERVMRYVEP-SEDAQRIKA---VNCVF   86 (253)
T ss_dssp             HHHHHHHHHHTCCCEEEEEEC--CGGGHHHHHHHHH--HHCSEEEECTTCT--TGGGGGSEE-CHHHHHHTC---CCEEE
T ss_pred             HHHHHHHHHcCCCCEEEeEec--CHHHHHHHHHHHh--hCCCceeecCChH--HHHHHHhCC-CHHHHHcCc---ceEee
Confidence            579999999999999998854  6678888898887  6799999999998  344556666 66 455544   45322


Q ss_pred             ccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------
Q 017679          202 LAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------  266 (368)
Q Consensus       202 L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------  266 (368)
                      ...|+++++      .|+++.|++.  +++| +++|||+|++ |++++..|.+.|+ +|++++|+.              
T Consensus        87 ~~~G~NTD~------~G~~~~l~~~--~~~~-~vliiGaGg~-a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~  156 (253)
T 3u62_A           87 RGKGYNTDW------VGVVKSLEGV--EVKE-PVVVVGAGGA-ARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFS  156 (253)
T ss_dssp             TTEEECCHH------HHHHHHTTTC--CCCS-SEEEECCSHH-HHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEE
T ss_pred             cCEEEcchH------HHHHHHHHhc--CCCC-eEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCC
Confidence            114665555      9999999876  5689 9999999997 9999999999998 899999863              


Q ss_pred             -CCHhhhccCCCEEEEecCC---CC--cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEec-
Q 017679          267 -KNPEQITSEADIVIAAAGV---AN--LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT-  339 (368)
Q Consensus       267 -~~L~~~~~~ADIVIsAvG~---p~--~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iT-  339 (368)
                       .++.+.++++|+||++|+.   |+  .++.++++++.+|+|+.|+  +          +.+.     +++ +..|+ . 
T Consensus       157 ~~~~~~~~~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~Divy~--~----------T~ll-----~~A-~~~G~-~~  217 (253)
T 3u62_A          157 LDQLDEVVKKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF--D----------TPLV-----VKA-RKLGV-KH  217 (253)
T ss_dssp             GGGHHHHHHTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS--C----------CHHH-----HHH-HHHTC-SE
T ss_pred             HHHHHhhhcCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC--C----------cHHH-----HHH-HHCCC-cE
Confidence             2344667899999999863   43  3566788999999999998  3          1343     455 34453 2 


Q ss_pred             cCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          340 PVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       340 PVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      -+||      ..||+.|.+.+++.|+|.
T Consensus       218 ~~~G------l~MLv~Qa~~af~~wtg~  239 (253)
T 3u62_A          218 IIKG------NLMFYYQAMENLKIWGIY  239 (253)
T ss_dssp             EECT------HHHHHHHHHHHHHHTTCC
T ss_pred             EECC------HHHHHHHHHHHHHHHhCC
Confidence            3555      559999999999999986

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=99.54  E-value=4.7e-15  Score=153.01  Aligned_cols=218  Identities=18%  Similarity=0.226  Sum_probs=146.7

Q ss_pred             EeCCCc-ccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679          111 LVGERR-DSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E  188 (368)
Q Consensus       111 ~vG~d~-aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~  188 (368)
                      ++|+.- -|.+- .+++.+++++|+++.|..+..+    ++.+.++.+.. +++.|++|++|++  .....+++.+++ .
T Consensus       239 viG~pi~hS~SP-~~hn~~f~~~gl~~~Y~~~~~~----~l~~~~~~~~~-~~~~G~nVTiP~K--~~i~~~ld~~~~~A  310 (523)
T 2o7s_A          239 IIGKPVSHSKSP-IVHNQAFKSVDFNGVYVHLLVD----NLVSFLQAYSS-SDFAGFSCTIPHK--EAALQCCDEVDPLA  310 (523)
T ss_dssp             EEESSCTTCCHH-HHHHHHHHHTTCSEEEEEEECS----CHHHHHHHTCS-TTEEEEEECTTCH--HHHHHHCSEECHHH
T ss_pred             EECCCccCCccH-HHHHHHHHHcCCCcEEEeEEcc----hHHHHHHHHhc-CCCCEEEECCCCH--HHHHHHhcccCHHH
Confidence            356432 44444 5799999999999999998763    56677777654 5799999999998  233445566666 6


Q ss_pred             cccCccCcc-e---eeeccccCCcCccccCCHHHHHHHHHHh-------------CCCCccceEEEEccCccchHHHHHH
Q 017679          189 KDVDGFHPL-N---IGNLAMRGREPLFIPCTPKGCIELLIRS-------------GVEIMGKNAVVIGRSNIVGLPTSLL  251 (368)
Q Consensus       189 KDVDgl~~~-N---~G~L~~g~~~~~~~PcTa~gv~~lL~~~-------------~i~l~GK~VvVIG~g~~VGrpla~l  251 (368)
                      +.+.+++.+ |   .|++. |++++      ..|++..|+..             ..+++||+++|+|+|++ |+.++..
T Consensus       311 ~~iGAvNti~~~~~~gk~~-g~nTD------~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGi-g~aia~~  382 (523)
T 2o7s_A          311 KSIGAVNTILRRKSDGKLL-GYNTD------CIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGA-GKALAYG  382 (523)
T ss_dssp             HHHTCCSEEEECTTTCCEE-EECCH------HHHHHHHHHHHC-------------------CEEEECCSHH-HHHHHHH
T ss_pred             HHhCCCeEEEEecCCCeEE-EEcCC------HHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHH-HHHHHHH
Confidence            777666433 3   24554 54444      47888888764             13688999999999987 9999999


Q ss_pred             HhhCCCEEEEEeCCCCC-----------------Hhh-hccCCCEEEEecCC---C----CcccCCCcCCCcEEEEeecC
Q 017679          252 LQRHHATVSIVHALTKN-----------------PEQ-ITSEADIVIAAAGV---A----NLVRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       252 L~~~gAtVti~h~~t~~-----------------L~~-~~~~ADIVIsAvG~---p----~~I~~e~ik~gavVIDvg~n  306 (368)
                      |+++|++|++++|+...                 +.+ .....|+||+++|.   |    ..+....+.+...++|+-++
T Consensus       383 L~~~G~~V~i~~R~~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~  462 (523)
T 2o7s_A          383 AKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYT  462 (523)
T ss_dssp             HHHHCC-CEEEESSHHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCS
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHcCCceeeHHHhhhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeC
Confidence            99999999999986321                 111 12347999999984   2    12444556667899999887


Q ss_pred             CCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          307 PVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       307 ~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      +.+          ++++     ..+ +..|+.  +-+|.+     ||++|.+.+++.|+|.
T Consensus       463 p~~----------T~ll-----~~a-~~~G~~--~i~Gl~-----mlv~Qa~~~f~lwtg~  500 (523)
T 2o7s_A          463 PRI----------TRLL-----REA-EESGAI--TVSGSE-----MFVRQAYEQFEIFTGL  500 (523)
T ss_dssp             SSS----------CHHH-----HHH-HTTTCE--EECHHH-----HHHHHHHHHHHHHHSS
T ss_pred             Ccc----------CHHH-----HHH-HHCCCE--EECcHH-----HHHHHHHHHHHHHhCC
Confidence            654          2333     333 334553  345555     9999999999999985

>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*

Probab=99.42  E-value=3.6e-13  Score=136.71  Aligned_cols=164  Identities=18%  Similarity=0.294  Sum_probs=126.8

Q ss_pred             HHHHH--HHHc-CCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEE---eCCCCCCCCHHHHHhcCCcccccCccCcc
Q 017679          124 NKIKA--CEEV-GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILV---QLPLPQHLDEGKILDAVSLEKDVDGFHPL  197 (368)
Q Consensus       124 ~k~k~--a~~~-GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlV---qlPLp~~id~~~il~~I~p~KDVDgl~~~  197 (368)
                      ++.|+  ++++ ||++.|+.|..+ +.+||.+.++.+.  +++.||+|   +.|++     .++++.++.  -|+  +++
T Consensus        90 mh~ka~lf~~~gGid~~yi~ldv~-d~de~~~~v~~l~--~~f~GinvED~T~P~k-----~~il~~l~~--avN--t~v  157 (439)
T 2dvm_A           90 MEGKALLFKRFGGVDAFPIMIKEQ-EPNKFIDIVKAIA--PTFGGINLEDIASPKC-----FYILERLRE--ELD--IPV  157 (439)
T ss_dssp             HHHHHHHHHHHHCCEEEEEECSCC-SHHHHHHHHHHTG--GGCSEEEECSCCTTHH-----HHHHHHHHH--HCS--SCE
T ss_pred             HHHHHHHHHHhCCCCCeeeeeecC-CHHHHHHHHHHhC--ccCcEEEEEeCCCchH-----HHHHHHHHH--hcC--EEE
Confidence            55655  9999 899999999542 6789999999987  68999999   99988     557776653  111  222


Q ss_pred             e--eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEe----CC---
Q 017679          198 N--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVH----AL---  265 (368)
Q Consensus       198 N--~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h----~~---  265 (368)
                      +  -|+.        .-..+..|++..|+..+.++++++|+|+|+|++ |+.++.+|...|+   +|++++    |+   
T Consensus       158 f~dD~~g--------tgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgA-g~aia~~L~~~G~~~~~I~vvd~~~~R~G~~  228 (439)
T 2dvm_A          158 FHDDQQG--------TAAVVLAGLLNALKVVGKKISEITLALFGAGAA-GFATLRILTEAGVKPENVRVVELVNGKPRIL  228 (439)
T ss_dssp             EEHHHHH--------HHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHH-HHHHHHHHHHTTCCGGGEEEEEEETTEEEEC
T ss_pred             EeCCCcE--------EeehHHHHHHHHHHHhCCCccCCEEEEECccHH-HHHHHHHHHHcCCCcCeEEEEEccCCCcCcc
Confidence            2  1111        114455899999999999999999999999998 9999999999998   799999    65   


Q ss_pred             -C-CC-----------------------HhhhccCCCEEEEecCCC-CcccCCC---cCCCcEEEEeecCCCC
Q 017679          266 -T-KN-----------------------PEQITSEADIVIAAAGVA-NLVRGSW---LKPGAVVLDVGTCPVD  309 (368)
Q Consensus       266 -t-~~-----------------------L~~~~~~ADIVIsAvG~p-~~I~~e~---ik~gavVIDvg~n~~~  309 (368)
                       . .+                       +.+.++++|++|++++.| +.+++++   +.++.+|+|+ +||.+
T Consensus       229 ~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDL-ynP~~  300 (439)
T 2dvm_A          229 TSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPL-ANPVP  300 (439)
T ss_dssp             CTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEEC-CSSSC
T ss_pred             ccccchhHHHHHHHHHhhccccccccccHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEEC-CCCCC
Confidence             1 12                       345567899999999984 6666544   5678999999 89864

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.16  E-value=7.5e-12  Score=118.83  Aligned_cols=170  Identities=16%  Similarity=0.108  Sum_probs=122.8

Q ss_pred             HcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc
Q 017679          131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL  210 (368)
Q Consensus       131 ~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~  210 (368)
                      +.|++..|..+  +++.++|.+.++.+--.....|++++.|+....+...+.+.++..+ ..-+.++|...+. .  ..+
T Consensus        24 ~~g~~~~y~~~--~v~~~~~~~~~~~~~~~~~~~g~~~t~~~~~G~~~~~~~~~~~~~~-~~~~gavnt~~~~-~--~~G   97 (287)
T 1lu9_A           24 DGGADHITGYG--NVTPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAVK-KRFFGPFRVSCML-D--SNG   97 (287)
T ss_dssp             HTTCSEEEEES--SCCTTTHHHHHHHHHSSCCGGGGGGEEEEEECSCHHHHHHHHHHHH-HHCBTTBCCEEEE-C--STT
T ss_pred             ccCcceEeccC--CcCHHHHHhhhcceEEecCccccccceEEEccchHHHHHHHHHHHH-HhcCCCeEEEEec-C--CCc
Confidence            79999999988  4577889999999744456889999999876667665555554332 1223555654322 1  122


Q ss_pred             cccCCHHHHHHHHHHh-CCCCccceEEEEc-cCccchHHHHHHHhhCCCEEEEEeCCCC---------------------
Q 017679          211 FIPCTPKGCIELLIRS-GVEIMGKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK---------------------  267 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~-~i~l~GK~VvVIG-~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------  267 (368)
                       .+++..|+++.|++. +.+++||+++|+| +|++ |+.++..|+++|++|++++|+..                     
T Consensus        98 -~nTd~~g~~~~l~~~~~~~l~gk~vlVtGaaGGi-G~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D  175 (287)
T 1lu9_A           98 -SNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPV-GMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE  175 (287)
T ss_dssp             -HHHHHHHHHHHHHHHTTSCCTTCEEEEETCSSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred             -CCchHHHHHHHHHHhhccCCCCCEEEEECCCcHH-HHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEec
Confidence             256779999999988 8899999999999 5664 99999999999999999987621                     


Q ss_pred             -----CHhhhccCCCEEEEecCCCC---cc-cCCCcCCCcEEEEeecCCC
Q 017679          268 -----NPEQITSEADIVIAAAGVAN---LV-RGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       268 -----~L~~~~~~ADIVIsAvG~p~---~I-~~e~ik~gavVIDvg~n~~  308 (368)
                           ++.+.+.++|+||+++|...   .+ +.+.+.+...++|+-+.+.
T Consensus       176 ~~~~~~~~~~~~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~  225 (287)
T 1lu9_A          176 TADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPP  225 (287)
T ss_dssp             CCSHHHHHHHTTTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSS
T ss_pred             CCCHHHHHHHHHhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhh
Confidence                 12345677899999997421   12 3344577789999987753

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=99.07  E-value=3.9e-10  Score=107.87  Aligned_cols=120  Identities=21%  Similarity=0.328  Sum_probs=92.9

Q ss_pred             HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCC
Q 017679          224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       224 ~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      +..+.++.||++.|||.|++ |+.++..|...|++|++++++.                .++.+.+++||+||++++. +
T Consensus       149 ~~~~~~l~g~~v~IiG~G~i-G~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~  226 (300)
T 2rir_A          149 QHTDYTIHGSQVAVLGLGRT-GMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-M  226 (300)
T ss_dssp             HTCSSCSTTSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-C
T ss_pred             HhcCCCCCCCEEEEEcccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-h
Confidence            44578999999999999886 9999999999999999998753                2456678899999999986 4


Q ss_pred             cccC---CCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEe---cc-CCCcccHHHHHHHHHHHHHH
Q 017679          288 LVRG---SWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI---TP-VPGGVGPMTVAMLLSNTLDS  360 (368)
Q Consensus       288 ~I~~---e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~i---TP-VPGGVGp~T~amLl~N~v~a  360 (368)
                      ++..   +.+++|+++||+++.+.                +++++.+ +..+..   .| +||+++|.+.+.|+.|.+..
T Consensus       227 ~i~~~~~~~mk~g~~lin~a~g~~----------------~~~~~~a-~~~G~~~i~~pg~~g~v~~a~a~~l~~~~~~~  289 (300)
T 2rir_A          227 ILNQTVLSSMTPKTLILDLASRPG----------------GTDFKYA-EKQGIKALLAPGLPGIVAPKTAGQILANVLSK  289 (300)
T ss_dssp             CBCHHHHTTSCTTCEEEECSSTTC----------------SBCHHHH-HHHTCEEEECCCHHHHHCHHHHHHHHHHHHHH
T ss_pred             hhCHHHHHhCCCCCEEEEEeCCCC----------------CcCHHHH-HHCCCEEEECCCCCCcHHHHHHHHHHHHHHHH
Confidence            5544   45789999999997642                2234333 222322   26 88999999999999998876


Q ss_pred             HH
Q 017679          361 AK  362 (368)
Q Consensus       361 ~~  362 (368)
                      +-
T Consensus       290 ~l  291 (300)
T 2rir_A          290 LL  291 (300)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.95  E-value=2.1e-09  Score=102.56  Aligned_cols=129  Identities=20%  Similarity=0.294  Sum_probs=95.6

Q ss_pred             CHHHHHH-HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------CCHhhhccCCC
Q 017679          215 TPKGCIE-LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEAD  277 (368)
Q Consensus       215 Ta~gv~~-lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------~~L~~~~~~AD  277 (368)
                      ++..++. +|...+.++.||+|.|||.|++ |+.++..|...|++|++++++.                .++.+.++++|
T Consensus       137 vae~a~~~~l~~~~~~l~g~~v~IiG~G~i-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aD  215 (293)
T 3d4o_A          137 TAEGTIMMAIQHTDFTIHGANVAVLGLGRV-GMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVD  215 (293)
T ss_dssp             HHHHHHHHHHHHCSSCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCS
T ss_pred             HHHHHHHHHHHhcCCCCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCC
Confidence            3444454 4566778999999999999986 9999999999999999998763                14556789999


Q ss_pred             EEEEecCCCCcccCC---CcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc-ceE--eccCCCcccHHHHH
Q 017679          278 IVIAAAGVANLVRGS---WLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL-ASV--ITPVPGGVGPMTVA  351 (368)
Q Consensus       278 IVIsAvG~p~~I~~e---~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~-a~~--iTPVPGGVGp~T~a  351 (368)
                      +||.+++. +++..+   .+++|+++||++..+.                +++++.+.+. ..+  +.-.||.++|.|.+
T Consensus       216 vVi~~~p~-~~i~~~~l~~mk~~~~lin~ar~~~----------------~~~~~~a~~~Gv~~~~~~~l~~~v~p~~a~  278 (293)
T 3d4o_A          216 VCINTIPA-LVVTANVLAEMPSHTFVIDLASKPG----------------GTDFRYAEKRGIKALLVPGLPGIVAPKTAG  278 (293)
T ss_dssp             EEEECCSS-CCBCHHHHHHSCTTCEEEECSSTTC----------------SBCHHHHHHHTCEEEECCCHHHHHCHHHHH
T ss_pred             EEEECCCh-HHhCHHHHHhcCCCCEEEEecCCCC----------------CCCHHHHHHCCCEEEECCCCCcccCHHHHH
Confidence            99999964 455443   4689999999997642                2344333221 122  24567888999999


Q ss_pred             HHHHHHHHHH
Q 017679          352 MLLSNTLDSA  361 (368)
Q Consensus       352 mLl~N~v~a~  361 (368)
                      .++.|.+..+
T Consensus       279 ~~~~~~~~~~  288 (293)
T 3d4o_A          279 RILADVLVKL  288 (293)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.95  E-value=1.8e-09  Score=91.89  Aligned_cols=90  Identities=17%  Similarity=0.351  Sum_probs=75.6

Q ss_pred             CCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------CCHhhhccCC
Q 017679          214 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------KNPEQITSEA  276 (368)
Q Consensus       214 cTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------~~L~~~~~~A  276 (368)
                      +.+...++.++...    |++|+|||.|.+ |+.++..|...|++|++++++.                 .++.+.++++
T Consensus         7 sv~~~a~~~~~~~~----~~~v~iiG~G~i-G~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~   81 (144)
T 3oj0_A            7 SIPSIVYDIVRKNG----GNKILLVGNGML-ASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNN   81 (144)
T ss_dssp             SHHHHHHHHHHHHC----CCEEEEECCSHH-HHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTC
T ss_pred             cHHHHHHHHHHhcc----CCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCC
Confidence            45566777777664    999999999876 9999999999999999998752                 3566778899


Q ss_pred             CEEEEecCCCCc-ccCCCcCCCcEEEEeecCCC
Q 017679          277 DIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       277 DIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~~  308 (368)
                      |+||+++|.++. ++.+++++|.+++|++.++.
T Consensus        82 Divi~at~~~~~~~~~~~l~~g~~vid~~~p~~  114 (144)
T 3oj0_A           82 DVIITATSSKTPIVEERSLMPGKLFIDLGNPPN  114 (144)
T ss_dssp             SEEEECSCCSSCSBCGGGCCTTCEEEECCSSCS
T ss_pred             CEEEEeCCCCCcEeeHHHcCCCCEEEEccCCcc
Confidence            999999998775 68899999999999998654

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=98.78  E-value=1.3e-08  Score=103.18  Aligned_cols=96  Identities=21%  Similarity=0.311  Sum_probs=81.3

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCC
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEAD  277 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~AD  277 (368)
                      +++|+...+-.+++..+..+.||+|+|+|.|.+ |+++|..|...|++|++++++.             .++.+.+++||
T Consensus       190 ~~Gt~~slldgi~ratg~~L~GktVgIiG~G~I-G~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~AD  268 (436)
T 3h9u_A          190 LYGCRESLVDGIKRATDVMIAGKTACVCGYGDV-GKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAH  268 (436)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCS
T ss_pred             cccchHHHHHHHHHhcCCcccCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCC
Confidence            345655555555667899999999999999986 9999999999999999998752             36889999999


Q ss_pred             EEEEecCCCCcccCCCc---CCCcEEEEeecCC
Q 017679          278 IVIAAAGVANLVRGSWL---KPGAVVLDVGTCP  307 (368)
Q Consensus       278 IVIsAvG~p~~I~~e~i---k~gavVIDvg~n~  307 (368)
                      |||.++|..++|+.+++   |+|++|||+|...
T Consensus       269 VVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~  301 (436)
T 3h9u_A          269 IFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFD  301 (436)
T ss_dssp             EEEECSSCSCSBCTTTGGGCCTTEEEEECSSSG
T ss_pred             EEEECCCCcCccCHHHHhhcCCCcEEEEeCCCC
Confidence            99999999999988776   8999999999543

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=98.74  E-value=4.5e-08  Score=97.84  Aligned_cols=164  Identities=18%  Similarity=0.265  Sum_probs=120.0

Q ss_pred             HHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCH---HHHHhcCCcccccCccCcce
Q 017679          123 RNKIKACEE-VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE---GKILDAVSLEKDVDGFHPLN  198 (368)
Q Consensus       123 ~~k~k~a~~-~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~---~~il~~I~p~KDVDgl~~~N  198 (368)
                      ..|...++. -||++.-+++... +.+|+.+.++.+-  |.+.||.+.     .+..   -++++.+..+-|+--||.--
T Consensus        97 egK~~Lf~~~agid~~pi~ldv~-~~dE~v~~vk~~~--p~f~~i~lE-----D~~~p~af~il~r~r~~~~Ipvf~DDi  168 (388)
T 1vl6_A           97 EGKAFLFKAFADIDAFPICLSES-EEEKIISIVKSLE--PSFGGINLE-----DIGAPKCFRILQRLSEEMNIPVFHDDQ  168 (388)
T ss_dssp             HHHHHHHHHHHCCEEEEEECSCC-CHHHHHHHHHHTG--GGCSEEEEC-----SCCTTHHHHHHHHHHHHCSSCEEEHHH
T ss_pred             hCHHHHHHhccCCceEeEEeCCC-CHHHHHHHHHHcC--CcceEeCHh-----hcCCHHHHHHHHHhhhhcCcceecccc
Confidence            456666664 6899888888665 5889999998876  567787542     2322   23333433333444444222


Q ss_pred             eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC----C-------
Q 017679          199 IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL----T-------  266 (368)
Q Consensus       199 ~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~----t-------  266 (368)
                      .|.          .-.+..|++..++-.+.++++.+|+|+|+|.+ |..++.+|...|+ +|++|+++    .       
T Consensus       169 qGT----------asV~lAal~~A~~i~g~~l~~~kVVv~GAGaA-G~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L  237 (388)
T 1vl6_A          169 QGT----------AVVVSAAFLNALKLTEKKIEEVKVVVNGIGAA-GYNIVKFLLDLGVKNVVAVDRKGILNENDPETCL  237 (388)
T ss_dssp             HHH----------HHHHHHHHHHHHHHHTCCTTTCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCS
T ss_pred             ccH----------HHHHHHHHHHHHHHhCCCCCCcEEEEECCCHH-HHHHHHHHHhCCCCeEEEEECCCcccCCCccccc
Confidence            222          22344667777777888999999999999886 9999999999998 89999987    1       


Q ss_pred             -----------------CCHhhhccCCCEEEEecCCCCcccCCCcC---CCcEEEEeecC
Q 017679          267 -----------------KNPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVGTC  306 (368)
Q Consensus       267 -----------------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik---~gavVIDvg~n  306 (368)
                                       .+|.+.++.||++|.+++ |+.|++||++   ++.+|+|++-+
T Consensus       238 ~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~Sa-p~l~t~emVk~Ma~~pIIfalSNP  296 (388)
T 1vl6_A          238 NEYHLEIARITNPERLSGDLETALEGADFFIGVSR-GNILKPEWIKKMSRKPVIFALANP  296 (388)
T ss_dssp             SHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEECSC-SSCSCHHHHTTSCSSCEEEECCSS
T ss_pred             CHHHHHHHHhhhccCchhhHHHHHccCCEEEEeCC-CCccCHHHHHhcCCCCEEEEcCCC
Confidence                             248899999999999998 8999999885   57899999943

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=98.71  E-value=2.1e-08  Score=101.98  Aligned_cols=94  Identities=22%  Similarity=0.278  Sum_probs=78.0

Q ss_pred             CCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEE
Q 017679          214 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVI  280 (368)
Q Consensus       214 cTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVI  280 (368)
                      |.-..+-.+.+.++..+.||+|+|+|.|.+ |+.+|..|...|++|+++++..             .++.+.+++|||||
T Consensus       229 ~~eslvdgI~Ratg~~L~GKTVgVIG~G~I-Gr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv  307 (464)
T 3n58_A          229 CKESLVDGIRRGTDVMMAGKVAVVCGYGDV-GKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVV  307 (464)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEE
T ss_pred             chHHHHHHHHHhcCCcccCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEE
Confidence            333333344456889999999999999985 9999999999999999997632             36888999999999


Q ss_pred             EecCCCCcccCCCc---CCCcEEEEeecCCC
Q 017679          281 AAAGVANLVRGSWL---KPGAVVLDVGTCPV  308 (368)
Q Consensus       281 sAvG~p~~I~~e~i---k~gavVIDvg~n~~  308 (368)
                      +++|.+++|+.+.+   |+|+++|++|....
T Consensus       308 ~atgt~~lI~~e~l~~MK~GAILINvGRgdv  338 (464)
T 3n58_A          308 TTTGNKDVITIDHMRKMKDMCIVGNIGHFDN  338 (464)
T ss_dssp             ECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred             ECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence            99999999987765   99999999997654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.67  E-value=6e-08  Score=96.81  Aligned_cols=123  Identities=22%  Similarity=0.259  Sum_probs=86.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------------------------CHh
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------------------------NPE  270 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------------------------~L~  270 (368)
                      +.+++|+|||.|.+ |..++..|...|++|++++++..                                       ++.
T Consensus       182 v~~~kV~ViG~G~i-G~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          182 VKPASALVLGVGVA-GLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             ECCCEEEEESCSHH-HHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             cCCCEEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            58899999999875 99999999999999999987531                                       245


Q ss_pred             hhccCCCEEEEecCC-----CCcccCCCc---CCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCC
Q 017679          271 QITSEADIVIAAAGV-----ANLVRGSWL---KPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVP  342 (368)
Q Consensus       271 ~~~~~ADIVIsAvG~-----p~~I~~e~i---k~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVP  342 (368)
                      +.+++|||||+++..     |.+|+.+++   |+|++|||++..+.- ... ++..+ ..   +....+  ..-+.+-.|
T Consensus       261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG-~~e-~t~~~-~~---~~~~gV--~~~~v~nlP  332 (381)
T 3p2y_A          261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGG-NCE-LTEPG-RT---IVHHGV--TITSPLNLP  332 (381)
T ss_dssp             HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTC-SBT-TCCTT-CE---EEETTE--EEECCSCTG
T ss_pred             HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCC-ccc-cccCC-Ce---EEECCE--EEEeeCCCc
Confidence            778999999998743     457888875   789999999987521 000 11001 11   011111  122355689


Q ss_pred             CcccHHHHHHHHHHHHHHHH
Q 017679          343 GGVGPMTVAMLLSNTLDSAK  362 (368)
Q Consensus       343 GGVGp~T~amLl~N~v~a~~  362 (368)
                      |-+ |.|...++.|.+..+-
T Consensus       333 ~~v-p~tAS~~~s~~l~~~l  351 (381)
T 3p2y_A          333 ATM-PEHASELYAKNVTALL  351 (381)
T ss_dssp             GGS-HHHHHHHHHHHHHHHH
T ss_pred             hhh-HHHHHHHHHHHHHHHH
Confidence            988 9999988888775543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.61  E-value=7.2e-08  Score=97.62  Aligned_cols=94  Identities=21%  Similarity=0.306  Sum_probs=77.8

Q ss_pred             CHHHHHHHHH-HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEE
Q 017679          215 TPKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVI  280 (368)
Q Consensus       215 Ta~gv~~lL~-~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVI  280 (368)
                      |...++.-+. ..+..+.||+|+|+|.|.+ |+.+|..|...|++|+++++..             .++.+.+++|||||
T Consensus       202 t~~s~~~gi~rat~~~L~GktV~ViG~G~I-Gk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi  280 (435)
T 3gvp_A          202 CRESILDGLKRTTDMMFGGKQVVVCGYGEV-GKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVI  280 (435)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEE
T ss_pred             hHHHHHHHHHHhhCceecCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEE
Confidence            3444444443 4678999999999999986 9999999999999999998642             36788999999999


Q ss_pred             EecCCCCcccCCCc---CCCcEEEEeecCCCC
Q 017679          281 AAAGVANLVRGSWL---KPGAVVLDVGTCPVD  309 (368)
Q Consensus       281 sAvG~p~~I~~e~i---k~gavVIDvg~n~~~  309 (368)
                      +++|.+++|+.+++   |+|++||++|....+
T Consensus       281 ~atgt~~lI~~e~l~~MK~gailINvgrg~~E  312 (435)
T 3gvp_A          281 TCTGNKNVVTREHLDRMKNSCIVCNMGHSNTE  312 (435)
T ss_dssp             ECSSCSCSBCHHHHHHSCTTEEEEECSSTTTT
T ss_pred             ECCCCcccCCHHHHHhcCCCcEEEEecCCCcc
Confidence            99999999987764   999999999976543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.57  E-value=1.9e-07  Score=93.86  Aligned_cols=123  Identities=23%  Similarity=0.247  Sum_probs=84.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------------------------
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------------------  267 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------------------------  267 (368)
                      .+.+.+|+|||.|.+ |..++.+|...||.|+++.++..                                         
T Consensus       187 ~v~~~kV~ViG~G~i-G~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          187 TVPAAKIFVMGAGVA-GLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             EECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHH
T ss_pred             CcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhh
Confidence            467899999999865 99999999999999999976531                                         


Q ss_pred             --CHhhhccCCCEEEEecC-----CCCcccCCCc---CCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceE
Q 017679          268 --NPEQITSEADIVIAAAG-----VANLVRGSWL---KPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASV  337 (368)
Q Consensus       268 --~L~~~~~~ADIVIsAvG-----~p~~I~~e~i---k~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~  337 (368)
                        ++.+.+++|||||+++.     .|.+|+.+++   |+|++|||++..+.- ..+ ++..+..+.    ...+  ..-+
T Consensus       266 ~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG-~~e-~t~~~~~~~----~~GV--~~~g  337 (405)
T 4dio_A          266 AALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGG-NIE-GAEAGKVTE----VGGV--RIVG  337 (405)
T ss_dssp             HHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTC-SBT-TCCTTEEEE----ETTE--EEEE
T ss_pred             HhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCC-Ccc-ccCCCCeEE----ECCE--EEEE
Confidence              24566789999999864     3557888775   789999999986521 001 111011111    1121  1223


Q ss_pred             eccCCCcccHHHHHHHHHHHHHHH
Q 017679          338 ITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       338 iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      ++-.||-+ |.|...++.|.+..+
T Consensus       338 v~nlP~~v-p~tAS~~ls~~~~~~  360 (405)
T 4dio_A          338 HLNVAGRI-AASASLLYAKNLVTF  360 (405)
T ss_dssp             CSSGGGGG-HHHHHHHHHHHHHHH
T ss_pred             eCCCCccC-HHHHHHHHHHHHHHH
Confidence            45568888 888888888766544

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=98.45  E-value=2.8e-07  Score=94.83  Aligned_cols=83  Identities=27%  Similarity=0.332  Sum_probs=72.3

Q ss_pred             HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCcccC
Q 017679          225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVRG  291 (368)
Q Consensus       225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~I~~  291 (368)
                      ..+.++.||+|+|||.|.+ |+.+|..|...|++|++++++.             .++.+.+++||+||++++.+++|+.
T Consensus       270 ~~g~~L~GktVgIIG~G~I-G~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~  348 (494)
T 3d64_A          270 ATDVMIAGKIAVVAGYGDV-GKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINH  348 (494)
T ss_dssp             HHCCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCH
T ss_pred             ccccccCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCH
Confidence            4677899999999999885 9999999999999999998753             2577889999999999988888987


Q ss_pred             CC---cCCCcEEEEeecCCC
Q 017679          292 SW---LKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 e~---ik~gavVIDvg~n~~  308 (368)
                      ++   +|+|+++||+|....
T Consensus       349 ~~l~~MK~gAilINvgrg~v  368 (494)
T 3d64_A          349 DHMKAMRHNAIVCNIGHFDS  368 (494)
T ss_dssp             HHHHHCCTTEEEEECSSSSC
T ss_pred             HHHhhCCCCcEEEEcCCCcc
Confidence            65   589999999997654

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=98.42  E-value=4.6e-07  Score=90.74  Aligned_cols=165  Identities=18%  Similarity=0.282  Sum_probs=120.1

Q ss_pred             HHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHH---HHhcCCcccccCccCcce
Q 017679          123 RNKIKACEE-VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK---ILDAVSLEKDVDGFHPLN  198 (368)
Q Consensus       123 ~~k~k~a~~-~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~---il~~I~p~KDVDgl~~~N  198 (368)
                      ..|...++. -||++.-+++... +.+|+.+.++.+-  |.+-||.+.     .+...+   +++.....-|+--||.--
T Consensus        93 eGK~~Lf~~~agid~~pi~Ldv~-~~dEfv~~v~~~~--p~F~~I~lE-----D~~~p~~f~il~~~r~~~~ipvf~DDi  164 (398)
T 2a9f_A           93 EGKAALFKAFAGVDAIPIVLDTK-DTEEIISIVKALA--PTFGGINLE-----DISAPRCFEIEQRLIKECHIPVFHDDQ  164 (398)
T ss_dssp             HHHHHHHHHHSSCEEEEEECCCC-CHHHHHHHHHHHG--GGCSEEEEC-----SCCTTHHHHHHHHHHHHCSSCEEEHHH
T ss_pred             hCHHHHHHhccCCceeeeEeCCC-CHHHHHHHHHHcC--CceeEeccc-----cCCChHHHHHHHHhhhcCCcceecchh
Confidence            457666665 6899888888664 5888999998876  677887764     332333   333332222344444222


Q ss_pred             eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC--------C---
Q 017679          199 IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL--------T---  266 (368)
Q Consensus       199 ~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~--------t---  266 (368)
                      .|.          .-.+-.|.+..++-.|..++..+|||+|+|-+ |..++.+|...|+ +|++|.++        +   
T Consensus       165 qGT----------a~V~lAall~al~l~g~~l~d~kVVi~GAGaA-G~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~  233 (398)
T 2a9f_A          165 HGT----------AIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSA-GLSITRKLLAAGATKVTVVDKFGIINEQEAAQLA  233 (398)
T ss_dssp             HHH----------HHHHHHHHHHHHHTTTCCTTSCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCC
T ss_pred             hhH----------HHHHHHHHHHHHHHhCCCCCccEEEEECCCHH-HHHHHHHHHHcCCCeEEEEECCCcccCCccccch
Confidence            222          12344677777888899999999999999875 9999999999999 99999875        1   


Q ss_pred             ----------------CCHhhhccCCCEEEEecCCCCcccCCCc---CCCcEEEEeecCCC
Q 017679          267 ----------------KNPEQITSEADIVIAAAGVANLVRGSWL---KPGAVVLDVGTCPV  308 (368)
Q Consensus       267 ----------------~~L~~~~~~ADIVIsAvG~p~~I~~e~i---k~gavVIDvg~n~~  308 (368)
                                      .+|.+.++.||++|-+.+ |+.+++||+   +++.+|+|+. ||.
T Consensus       234 ~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma~~pIIfals-NPt  292 (398)
T 2a9f_A          234 PHHLDIAKVTNREFKSGTLEDALEGADIFIGVSA-PGVLKAEWISKMAARPVIFAMA-NPI  292 (398)
T ss_dssp             C---CHHHHHSCTTCCCSCSHHHHTTCSEEECCS-TTCCCHHHHHTSCSSCEEEECC-SSS
T ss_pred             HHHHHHhhccCcccchhhHHHHhccCCEEEecCC-CCCCCHHHHHhhCCCCEEEECC-CCC
Confidence                            237788899999998876 999999997   5799999998 554

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=98.39  E-value=4e-07  Score=93.34  Aligned_cols=83  Identities=22%  Similarity=0.280  Sum_probs=71.8

Q ss_pred             HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCcccC
Q 017679          225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVRG  291 (368)
Q Consensus       225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~I~~  291 (368)
                      ..+..+.||+|+|||.|.+ |+.+|..|...|++|++++++.             .++.+.+++||+||++++.+++|+.
T Consensus       250 ~~~~~l~GktVgIIG~G~I-G~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~  328 (479)
T 1v8b_A          250 ATDFLISGKIVVICGYGDV-GKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKL  328 (479)
T ss_dssp             HHCCCCTTSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSSSBCH
T ss_pred             ccccccCCCEEEEEeeCHH-HHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhhhcCH
Confidence            4677899999999999886 9999999999999999998753             2577889999999999988888876


Q ss_pred             C---CcCCCcEEEEeecCCC
Q 017679          292 S---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 e---~ik~gavVIDvg~n~~  308 (368)
                      +   .+|+|+++||+|....
T Consensus       329 ~~l~~MK~gailiNvgrg~~  348 (479)
T 1v8b_A          329 EHLLKMKNNAVVGNIGHFDD  348 (479)
T ss_dssp             HHHTTCCTTCEEEECSSTTT
T ss_pred             HHHhhcCCCcEEEEeCCCCc
Confidence            5   4689999999997644

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.33  E-value=2.3e-06  Score=84.70  Aligned_cols=78  Identities=23%  Similarity=0.296  Sum_probs=63.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC----------------------------------------
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN----------------------------------------  268 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~----------------------------------------  268 (368)
                      ++.|++|+|+|.|.+ |+.++..+...|++|++++++...                                        
T Consensus       169 ~l~g~~V~ViGaG~i-G~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          169 TVPPARVLVFGVGVA-GLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             EECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred             CCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            678999999999875 999999999999999999865311                                        


Q ss_pred             ---HhhhccCCCEEEEec---CC--CCcccCC---CcCCCcEEEEeecCC
Q 017679          269 ---PEQITSEADIVIAAA---GV--ANLVRGS---WLKPGAVVLDVGTCP  307 (368)
Q Consensus       269 ---L~~~~~~ADIVIsAv---G~--p~~I~~e---~ik~gavVIDvg~n~  307 (368)
                         +.+.++.+|+||.++   |.  |++++.+   .+++|.+|||+++++
T Consensus       248 ~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~  297 (384)
T 1l7d_A          248 AEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA  297 (384)
T ss_dssp             HHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCC
Confidence               556678999999999   53  4466654   458999999999865

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.29  E-value=1.9e-06  Score=88.48  Aligned_cols=84  Identities=29%  Similarity=0.386  Sum_probs=71.5

Q ss_pred             HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCc
Q 017679          222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      +.+..+..+.||+|+|+|.|++ |+.+|..|...||+|+++.++.             .++.+....+|+|+.++|.++.
T Consensus       255 i~r~tg~~L~GKtVvVtGaGgI-G~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~v  333 (488)
T 3ond_A          255 LMRATDVMIAGKVAVVAGYGDV-GKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDI  333 (488)
T ss_dssp             HHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCS
T ss_pred             HHHHcCCcccCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhh
Confidence            3456788999999999999964 9999999999999999997752             2466778899999999999988


Q ss_pred             ccC---CCcCCCcEEEEeecC
Q 017679          289 VRG---SWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 I~~---e~ik~gavVIDvg~n  306 (368)
                      +..   +.+++|++|+++|..
T Consensus       334 l~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          334 IMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             BCHHHHTTSCTTEEEEESSST
T ss_pred             hhHHHHHhcCCCeEEEEcCCC
Confidence            865   456899999999975

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.22  E-value=1.5e-06  Score=86.71  Aligned_cols=90  Identities=14%  Similarity=0.211  Sum_probs=66.9

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-----------------CCHhhhccCCCE
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-----------------KNPEQITSEADI  278 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-----------------~~L~~~~~~ADI  278 (368)
                      ...+++.+....++.|++|+|||+|++ |+.++..|...|+ +|++++++.                 .++.+.+..+|+
T Consensus       152 ~~av~~a~~~~~~l~g~~VlIiGaG~i-G~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDv  230 (404)
T 1gpj_A          152 SAAVELAERELGSLHDKTVLVVGAGEM-GKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDV  230 (404)
T ss_dssp             HHHHHHHHHHHSCCTTCEEEEESCCHH-HHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSE
T ss_pred             HHHHHHHHHHhccccCCEEEEEChHHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCE
Confidence            444454442222679999999999886 9999999999998 999998763                 134456678999


Q ss_pred             EEEecCCCCc-ccCCC-----c----CCCcEEEEeecCC
Q 017679          279 VIAAAGVANL-VRGSW-----L----KPGAVVLDVGTCP  307 (368)
Q Consensus       279 VIsAvG~p~~-I~~e~-----i----k~gavVIDvg~n~  307 (368)
                      ||+++|.+.. ++.++     +    .++.++||++.++
T Consensus       231 Vi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~  269 (404)
T 1gpj_A          231 VVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR  269 (404)
T ss_dssp             EEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred             EEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence            9999998775 44333     2    2468999999865

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=98.19  E-value=2.3e-06  Score=85.40  Aligned_cols=142  Identities=18%  Similarity=0.219  Sum_probs=98.2

Q ss_pred             HHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC---------CCCHhhhccCCCEEEEecC-------
Q 017679          221 ELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------TKNPEQITSEADIVIAAAG-------  284 (368)
Q Consensus       221 ~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~---------t~~L~~~~~~ADIVIsAvG-------  284 (368)
                      .+.++.+.++.||++.|||.|.+ |+.+|..|...|++|+.+++.         ..++.+.+++||+|+.+++       
T Consensus       108 ~l~r~~g~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~  186 (381)
T 3oet_A          108 MLAERDGFSLRDRTIGIVGVGNV-GSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPY  186 (381)
T ss_dssp             HHHHHTTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTT
T ss_pred             HHHHhcCCccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccc
Confidence            44567789999999999999987 999999999999999999742         2468899999999998886       


Q ss_pred             -CCCcccCC---CcCCCcEEEEeecCCCCCCCCCCC----CCCcEEEc---ccchhh------hhccceEeccCCCcccH
Q 017679          285 -VANLVRGS---WLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLMG---DVCYEE------AMRLASVITPVPGGVGP  347 (368)
Q Consensus       285 -~p~~I~~e---~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~G---DVd~~~------~~~~a~~iTPVPGGVGp  347 (368)
                       ..+++..+   .+|+|+++||++.-.+.   |...    -..+++.|   ||-..+      ..+..-.+||=-||.-.
T Consensus       187 ~T~~li~~~~l~~mk~gailIN~aRG~vv---de~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~  263 (381)
T 3oet_A          187 KTLHLADETLIRRLKPGAILINACRGPVV---DNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTL  263 (381)
T ss_dssp             CCTTSBCHHHHHHSCTTEEEEECSCGGGB---CHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCH
T ss_pred             cchhhcCHHHHhcCCCCcEEEECCCCccc---CHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCCEEECCccCcCcH
Confidence             22356544   36899999999976543   1100    00123322   552111      11122368998888877


Q ss_pred             HHHHHHHHHHHHHHHHHhC
Q 017679          348 MTVAMLLSNTLDSAKRAYG  366 (368)
Q Consensus       348 ~T~amLl~N~v~a~~~~~~  366 (368)
                      -+..-+...+++...++++
T Consensus       264 e~~~~~~~~~~~~l~~~l~  282 (381)
T 3oet_A          264 EGKARGTTQVFEAYSAFIG  282 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHc
Confidence            6666666666666666654

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=98.18  E-value=1.7e-05  Score=77.54  Aligned_cols=134  Identities=16%  Similarity=0.103  Sum_probs=92.3

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCCC----Cccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~p----~~I~  290 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.            .++.+.+++||+|+.+++..    +++.
T Consensus       160 ~~~l~g~tvgIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~  238 (335)
T 2g76_A          160 GTELNGKTLGILGLGRI-GREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLN  238 (335)
T ss_dssp             BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBC
T ss_pred             CcCCCcCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhC
Confidence            35799999999999987 9999999999999999998753            25778899999999998743    3454


Q ss_pred             C---CCcCCCcEEEEeecCCCCCCCCCC--C--CCCcEEEc---ccch-------hhhhccceEeccCCCcccHHHHHHH
Q 017679          291 G---SWLKPGAVVLDVGTCPVDVSVDPS--C--EYGYRLMG---DVCY-------EEAMRLASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~~~~~d~t--~--~~~~kl~G---DVd~-------~~~~~~a~~iTPVPGGVGp~T~amL  353 (368)
                      .   +.+|+|+++||+|...+.   |..  .  -..+++-|   ||-.       +-.....-.+||-.+|.-.-+..-+
T Consensus       239 ~~~l~~mk~gailIN~arg~vv---d~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~  315 (335)
T 2g76_A          239 DNTFAQCKKGVRVVNCARGGIV---DEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRC  315 (335)
T ss_dssp             HHHHTTSCTTEEEEECSCTTSB---CHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHH
T ss_pred             HHHHhhCCCCcEEEECCCcccc---CHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHH
Confidence            3   457999999999986543   110  0  00123433   4311       1111124568999999877766555


Q ss_pred             HHHHHHHHHHH
Q 017679          354 LSNTLDSAKRA  364 (368)
Q Consensus       354 l~N~v~a~~~~  364 (368)
                      ...+++..+++
T Consensus       316 ~~~~~~nl~~~  326 (335)
T 2g76_A          316 GEEIAVQFVDM  326 (335)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            55555555544

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.16  E-value=1.2e-06  Score=87.54  Aligned_cols=78  Identities=21%  Similarity=0.272  Sum_probs=62.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------------------------
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------------------  267 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------------------------  267 (368)
                      .+.|++|+|+|.|.+ |+.++.++...|++|++++++..                                         
T Consensus       169 ~l~g~~V~ViGaG~i-G~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  247 (401)
T 1x13_A          169 KVPPAKVMVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME  247 (401)
T ss_dssp             EECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred             CcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence            367999999999875 99999999999999999987531                                         


Q ss_pred             CHhhhccCCCEEEEecCC-----CCcccCCC---cCCCcEEEEeecCC
Q 017679          268 NPEQITSEADIVIAAAGV-----ANLVRGSW---LKPGAVVLDVGTCP  307 (368)
Q Consensus       268 ~L~~~~~~ADIVIsAvG~-----p~~I~~e~---ik~gavVIDvg~n~  307 (368)
                      ++.+.++.+|+||.+++.     |.+++.++   +++|.+|||+++.+
T Consensus       248 ~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~  295 (401)
T 1x13_A          248 LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQN  295 (401)
T ss_dssp             HHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred             HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCC
Confidence            145667789999999644     35676554   57899999999764

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=98.14  E-value=5.6e-06  Score=80.82  Aligned_cols=81  Identities=20%  Similarity=0.306  Sum_probs=67.1

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCC----CCccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~----p~~I~  290 (368)
                      +.++.||++.|||.|.+ |+++|..|...|++|+.++++.            .++.+.+++||+|+.+++.    .+++.
T Consensus       135 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~  213 (324)
T 3hg7_A          135 YQGLKGRTLLILGTGSI-GQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFT  213 (324)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBC
T ss_pred             CcccccceEEEEEECHH-HHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhH
Confidence            46899999999999987 9999999999999999998753            2577889999999999873    23565


Q ss_pred             CCC---cCCCcEEEEeecCCC
Q 017679          291 GSW---LKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~e~---ik~gavVIDvg~n~~  308 (368)
                      .+.   +|+|+++||+|.-..
T Consensus       214 ~~~l~~mk~gailIN~aRG~~  234 (324)
T 3hg7_A          214 ASRFEHCKPGAILFNVGRGNA  234 (324)
T ss_dssp             TTTTTCSCTTCEEEECSCGGG
T ss_pred             HHHHhcCCCCcEEEECCCchh
Confidence            544   689999999996554

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=98.10  E-value=4.3e-06  Score=82.28  Aligned_cols=135  Identities=16%  Similarity=0.168  Sum_probs=93.2

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCC----CCccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~----p~~I~  290 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.            .++.+.+++||+|+.+++.    .++|.
T Consensus       168 g~~l~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~  246 (345)
T 4g2n_A          168 GMGLTGRRLGIFGMGRI-GRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLD  246 (345)
T ss_dssp             BCCCTTCEEEEESCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBC
T ss_pred             ccccCCCEEEEEEeChh-HHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhC
Confidence            46799999999999987 9999999999999999998753            3688899999999999973    24565


Q ss_pred             CC---CcCCCcEEEEeecCCCCCCCCCCC----CCCcEEEc---ccchhh-------hhccceEeccCCCcccHHHHHHH
Q 017679          291 GS---WLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLMG---DVCYEE-------AMRLASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       291 ~e---~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~G---DVd~~~-------~~~~a~~iTPVPGGVGp~T~amL  353 (368)
                      .+   .+|+|+++||++.-.+.   |...    -..|++-|   ||-..+       ..-..-.+||=-||.-.-+..-+
T Consensus       247 ~~~l~~mk~gailIN~aRG~~v---de~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~  323 (345)
T 4g2n_A          247 HDRIAKIPEGAVVINISRGDLI---NDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDAM  323 (345)
T ss_dssp             HHHHHHSCTTEEEEECSCGGGB---CHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHHH
T ss_pred             HHHHhhCCCCcEEEECCCCchh---CHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHHH
Confidence            54   46899999999965542   1100    00134443   442111       01113468888888877666666


Q ss_pred             HHHHHHHHHHHh
Q 017679          354 LSNTLDSAKRAY  365 (368)
Q Consensus       354 l~N~v~a~~~~~  365 (368)
                      ...+++..++++
T Consensus       324 ~~~~~~ni~~~l  335 (345)
T 4g2n_A          324 GWLLIQGIEALN  335 (345)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            666665555543

>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}

Probab=98.07  E-value=6.1e-06  Score=82.29  Aligned_cols=142  Identities=16%  Similarity=0.130  Sum_probs=95.9

Q ss_pred             HHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC---------CCCHhhhccCCCEEEEecCC-----
Q 017679          220 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------TKNPEQITSEADIVIAAAGV-----  285 (368)
Q Consensus       220 ~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~---------t~~L~~~~~~ADIVIsAvG~-----  285 (368)
                      +.+.++.+.++.||+|.|||.|.+ |+.+|..|...|++|+.+++.         ..++.+.+++||+|+.+++.     
T Consensus       104 L~l~r~~~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~  182 (380)
T 2o4c_A          104 LAMAEVRGADLAERTYGVVGAGQV-GGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGE  182 (380)
T ss_dssp             HHHHHHHTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSS
T ss_pred             HHHHhhhhcccCCCEEEEEeCCHH-HHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccc
Confidence            344566788999999999999986 999999999999999998642         24688889999999998862     


Q ss_pred             ---CCcccCC---CcCCCcEEEEeecCCCCCCCCCCC----CCCcE---EEcccchhh------hhccceEeccCCCccc
Q 017679          286 ---ANLVRGS---WLKPGAVVLDVGTCPVDVSVDPSC----EYGYR---LMGDVCYEE------AMRLASVITPVPGGVG  346 (368)
Q Consensus       286 ---p~~I~~e---~ik~gavVIDvg~n~~~~~~d~t~----~~~~k---l~GDVd~~~------~~~~a~~iTPVPGGVG  346 (368)
                         .++++.+   .+|+|+++||++...+.   |...    -..++   ..=||-..+      ..+..-.+||=-+|.-
T Consensus       183 ~~T~~li~~~~l~~mk~gailIN~sRG~vv---d~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~nvi~TPHiag~t  259 (380)
T 2o4c_A          183 HPTRHLLDEPRLAALRPGTWLVNASRGAVV---DNQALRRLLEGGADLEVALDVWEGEPQADPELAARCLIATPHIAGYS  259 (380)
T ss_dssp             SCCTTSBCHHHHHTSCTTEEEEECSCGGGB---CHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTTCSEECSSCTTCC
T ss_pred             cchhhhcCHHHHhhCCCCcEEEECCCCccc---CHHHHHHHHHhCCCceEEeeeeccCCCCchhhccCCEEEccccCcCC
Confidence               2345443   46899999999976543   1100    00112   223442111      1122346899888887


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 017679          347 PMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       347 p~T~amLl~N~v~a~~~~~  365 (368)
                      .-+..-....+++...+++
T Consensus       260 ~e~~~~~~~~~~~nl~~~l  278 (380)
T 2o4c_A          260 LEGKLRGTAQIYQAYCAWR  278 (380)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            7666655555655555554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.07  E-value=3.7e-06  Score=82.57  Aligned_cols=159  Identities=18%  Similarity=0.174  Sum_probs=99.2

Q ss_pred             HHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEE-eCCCCCCCCHHHHHhcCCc-ccccCc-cCcceee
Q 017679          125 KIKACEEVGI-KSIVTEFADGCTEDEVLNALSNYNQDSSINGILV-QLPLPQHLDEGKILDAVSL-EKDVDG-FHPLNIG  200 (368)
Q Consensus       125 k~k~a~~~GI-~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlV-qlPLp~~id~~~il~~I~p-~KDVDg-l~~~N~G  200 (368)
                      ++..+.+.|. .+.|.++..  + .++++.+.+.    ++.|+.+ +.|++.+.  ..+++.+++ +.-+-. +...|+.
T Consensus        79 ~~~~~~~~g~~~~~y~~~~~--~-~~l~~~l~~~----gi~~~~~etvp~k~~~--~~~l~~~s~~Ag~~a~~~gA~nt~  149 (361)
T 1pjc_A           79 AEYDLMQKDQLLFTYLHLAA--A-RELTEQLMRV----GLTAIAYETVELPNRS--LPLLTPMSIIAGRLSVQFGARFLE  149 (361)
T ss_dssp             GGGGGCCTTCEEEECCCGGG--C-HHHHHHHHHH----TCEEEEGGGCCCTTSC--CTTTHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHhhcCCCEEEEEecccc--C-HHHHHHHHHc----CCeEEEEeeeEcccCC--ccccCcchHHHHHHHHHHHHHHHh
Confidence            3445566785 777777754  3 3566666554    5889998 88876321  122222222 111100 0223433


Q ss_pred             eccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------
Q 017679          201 NLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------  267 (368)
Q Consensus       201 ~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------  267 (368)
                      +...|   .+|.          |... ..+++++|+|+|+|++ |+.++..|...|++|++++++..             
T Consensus       150 ~~~~g---~G~~----------l~~l-~~l~~~~VlViGaGgv-G~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~  214 (361)
T 1pjc_A          150 RQQGG---RGVL----------LGGV-PGVKPGKVVILGGGVV-GTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRV  214 (361)
T ss_dssp             GGGTS---CCCC----------TTCB-TTBCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGS
T ss_pred             hccCC---Ccee----------ccCC-CCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCcee
Confidence            33211   1232          0000 1367899999999775 99999999999999999987631             


Q ss_pred             --------CHhhhccCCCEEEEecCCCC-----ccc---CCCcCCCcEEEEeecCC
Q 017679          268 --------NPEQITSEADIVIAAAGVAN-----LVR---GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       268 --------~L~~~~~~ADIVIsAvG~p~-----~I~---~e~ik~gavVIDvg~n~  307 (368)
                              ++.+.++.+|+||+++|.|.     ++.   -+.+++|.+|+|+++++
T Consensus       215 ~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          215 ELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             EEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             EeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCC
Confidence                    23345678999999998654     233   35678999999999875

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=98.07  E-value=4.1e-06  Score=81.73  Aligned_cols=81  Identities=15%  Similarity=0.237  Sum_probs=67.0

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCC----CCccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~----p~~I~  290 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.            .++.+.+++||+|+.+++.    .+++.
T Consensus       132 ~~~l~gktvGIiGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~  210 (324)
T 3evt_A          132 TSTLTGQQLLIYGTGQI-GQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFS  210 (324)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBS
T ss_pred             CccccCCeEEEECcCHH-HHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcC
Confidence            56899999999999987 9999999999999999998753            2567889999999999873    34565


Q ss_pred             CC---CcCCCcEEEEeecCCC
Q 017679          291 GS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~e---~ik~gavVIDvg~n~~  308 (368)
                      .+   .+|+|+++||+|.-..
T Consensus       211 ~~~l~~mk~gailIN~aRG~~  231 (324)
T 3evt_A          211 TELFQQTKQQPMLINIGRGPA  231 (324)
T ss_dssp             HHHHHTCCSCCEEEECSCGGG
T ss_pred             HHHHhcCCCCCEEEEcCCChh
Confidence            44   4689999999996543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=98.06  E-value=3.9e-06  Score=81.54  Aligned_cols=81  Identities=14%  Similarity=0.108  Sum_probs=66.7

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------CHhhhccCCCEEEEecCC----CCccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGV----ANLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------~L~~~~~~ADIVIsAvG~----p~~I~  290 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++..            ++.+.+++||+|+.+++.    .+++.
T Consensus       134 ~~~l~g~tvGIiG~G~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~  212 (315)
T 3pp8_A          134 EYTREEFSVGIMGAGVL-GAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIIN  212 (315)
T ss_dssp             CCCSTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBS
T ss_pred             CCCcCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhcc
Confidence            45789999999999987 99999999999999999976532            477889999999999873    24565


Q ss_pred             C---CCcCCCcEEEEeecCCC
Q 017679          291 G---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~  308 (368)
                      .   ..+|+|+++||+|.-..
T Consensus       213 ~~~l~~mk~gailIN~aRG~~  233 (315)
T 3pp8_A          213 SELLDQLPDGAYVLNLARGVH  233 (315)
T ss_dssp             HHHHTTSCTTEEEEECSCGGG
T ss_pred             HHHHhhCCCCCEEEECCCChh
Confidence            4   35789999999996553

>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*

Probab=98.05  E-value=5.7e-06  Score=82.88  Aligned_cols=128  Identities=16%  Similarity=0.100  Sum_probs=85.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC---CCHhhhccCCCEEEEecC----CCCcccCCCc----CC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---KNPEQITSEADIVIAAAG----VANLVRGSWL----KP  296 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t---~~L~~~~~~ADIVIsAvG----~p~~I~~e~i----k~  296 (368)
                      ...+|+|||++|.||+..+..+...||   .|++.+.+.   ....+.+++|||||+++-    .|.+|+.+|+    |+
T Consensus       213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~~~i~~aDivIn~vlig~~aP~Lvt~e~v~~m~k~  292 (394)
T 2qrj_A          213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPFDEIPQADIFINCIYLSKPIAPFTNMEKLNNPNRR  292 (394)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCCTHHHHSSEEEECCCCCSSCCCSCCHHHHCCTTCC
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCchhhHhhCCEEEECcCcCCCCCcccCHHHHhcCcCC
Confidence            467999999956679999999999998   899997643   111256789999999986    4888998876    78


Q ss_pred             CcEEEEeecCCC---CCCC---CCCCCCC-cEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          297 GAVVLDVGTCPV---DVSV---DPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       297 gavVIDvg~n~~---~~~~---d~t~~~~-~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      |++|||++..+.   +++.   .+|+..+ .-...+.+-..+  ..-+++-.||-+ |.|...++.|.+--+
T Consensus       293 gsVIVDVA~D~GG~~et~~f~~~~Tt~~~P~~~~~g~~~~~V--~~~~v~nlP~~l-PrtAS~~~sn~llp~  361 (394)
T 2qrj_A          293 LRTVVDVSADTTNPHNPIPIYTVATVFNKPTVLVPTTAGPKL--SVISIDHLPSLL-PREASEFFSHDLLPS  361 (394)
T ss_dssp             CCEEEETTCCTTCTTCSSCSCCCCCBTTBCCEEECCSSSSCE--EEECCTTGGGGS-HHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecCCCCCcCcccccccCCccCCCEEEECCCCCCCE--EEEEeCChhhhh-HHHHHHHHHHHHHHH
Confidence            999999987652   1110   1121111 001100000001  123456779988 999999998877554

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=98.05  E-value=6.5e-06  Score=79.17  Aligned_cols=79  Identities=16%  Similarity=0.273  Sum_probs=66.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC-C---CcccC---
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A---NLVRG---  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~-p---~~I~~---  291 (368)
                      .++.||++.|||.|.+ |+++|..|...|++|+.++++.         .++.+.+++||+|+.+++. +   +++..   
T Consensus       118 ~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l  196 (290)
T 3gvx_A          118 TLLYGKALGILGYGGI-GRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLL  196 (290)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHH
T ss_pred             eeeecchheeeccCch-hHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHH
Confidence            3689999999999987 9999999999999999998753         3788899999999999973 3   34543   


Q ss_pred             CCcCCCcEEEEeecCC
Q 017679          292 SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       292 e~ik~gavVIDvg~n~  307 (368)
                      +.+|+|+++||++.-.
T Consensus       197 ~~mk~gailIN~aRG~  212 (290)
T 3gvx_A          197 ANARKNLTIVNVARAD  212 (290)
T ss_dssp             TTCCTTCEEEECSCGG
T ss_pred             hhhhcCceEEEeehhc
Confidence            4579999999999654

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=98.05  E-value=4.9e-06  Score=81.82  Aligned_cols=134  Identities=18%  Similarity=0.140  Sum_probs=92.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------CHhhhccCCCEEEEecCC----CCcccCC-
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NPEQITSEADIVIAAAGV----ANLVRGS-  292 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------~L~~~~~~ADIVIsAvG~----p~~I~~e-  292 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|+.++++..          ++.+.+++||+|+.+++.    .+++..+ 
T Consensus       144 ~~l~gktvgIiGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~  222 (343)
T 2yq5_A          144 NEIYNLTVGLIGVGHI-GSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQ  222 (343)
T ss_dssp             CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHH
T ss_pred             cccCCCeEEEEecCHH-HHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHH
Confidence            4689999999999987 99999999999999999987632          577889999999999973    3456554 


Q ss_pred             --CcCCCcEEEEeecCCCCCCCCCCC----CCCcEE---Ecccchhhh---------------------hccceEeccCC
Q 017679          293 --WLKPGAVVLDVGTCPVDVSVDPSC----EYGYRL---MGDVCYEEA---------------------MRLASVITPVP  342 (368)
Q Consensus       293 --~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl---~GDVd~~~~---------------------~~~a~~iTPVP  342 (368)
                        .+|+|+++||+|.-...   |...    -..+++   .=||-..+-                     ....-.+||=-
T Consensus       223 l~~mk~gailIN~aRg~~v---d~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHi  299 (343)
T 2yq5_A          223 LKEMKKSAYLINCARGELV---DTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHS  299 (343)
T ss_dssp             HHHSCTTCEEEECSCGGGB---CHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSC
T ss_pred             HhhCCCCcEEEECCCChhh---hHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCcc
Confidence              36999999999965432   1000    000111   223321111                     01234688988


Q ss_pred             CcccHHHHHHHHHHHHHHHHHHh
Q 017679          343 GGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       343 GGVGp~T~amLl~N~v~a~~~~~  365 (368)
                      ||.-.-+..-+...+++..++++
T Consensus       300 a~~t~ea~~~~~~~~~~ni~~~l  322 (343)
T 2yq5_A          300 AFYTETSIRNMVQICLTDQLTIA  322 (343)
T ss_dssp             TTCBHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHH
Confidence            88887777666666666665554

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=98.04  E-value=1.1e-05  Score=77.65  Aligned_cols=79  Identities=25%  Similarity=0.312  Sum_probs=66.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------CCHhhhccCCCEEEEecCCC----CcccC---CC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------KNPEQITSEADIVIAAAGVA----NLVRG---SW  293 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------~~L~~~~~~ADIVIsAvG~p----~~I~~---e~  293 (368)
                      ++.||++.|||.|.+ |+.+|..|...|++|+.++++.        .++.+.+++||+|+.+++..    +++..   ..
T Consensus       121 ~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~  199 (303)
T 1qp8_A          121 LIQGEKVAVLGLGEI-GTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLAL  199 (303)
T ss_dssp             CCTTCEEEEESCSTH-HHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred             CCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhh
Confidence            689999999999987 9999999999999999988653        36778899999999998732    34543   45


Q ss_pred             cCCCcEEEEeecCCC
Q 017679          294 LKPGAVVLDVGTCPV  308 (368)
Q Consensus       294 ik~gavVIDvg~n~~  308 (368)
                      +|+|+++||++.-..
T Consensus       200 mk~gailin~srg~~  214 (303)
T 1qp8_A          200 MAEDAVFVNVGRAEV  214 (303)
T ss_dssp             SCTTCEEEECSCGGG
T ss_pred             CCCCCEEEECCCCcc
Confidence            789999999997654

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=98.04  E-value=8.7e-06  Score=78.97  Aligned_cols=80  Identities=14%  Similarity=0.150  Sum_probs=66.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC-CC-------------CCHhhhccCCCEEEEecCC-C---Ccc
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA-LT-------------KNPEQITSEADIVIAAAGV-A---NLV  289 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~-~t-------------~~L~~~~~~ADIVIsAvG~-p---~~I  289 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|+++++ +.             .++.+.+++||+|+.+++. +   +++
T Consensus       142 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i  220 (320)
T 1gdh_A          142 EKLDNKTLGIYGFGSI-GQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFF  220 (320)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred             cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhc
Confidence            4789999999999987 99999999999999999987 43             2677888999999999873 2   345


Q ss_pred             cC---CCcCCCcEEEEeecCCC
Q 017679          290 RG---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       290 ~~---e~ik~gavVIDvg~n~~  308 (368)
                      ..   +.+|+|+++||++....
T Consensus       221 ~~~~l~~mk~gailIn~arg~~  242 (320)
T 1gdh_A          221 NKATIKSLPQGAIVVNTARGDL  242 (320)
T ss_dssp             SHHHHTTSCTTEEEEECSCGGG
T ss_pred             CHHHHhhCCCCcEEEECCCCcc
Confidence            44   56799999999997643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.04  E-value=6.8e-06  Score=84.56  Aligned_cols=82  Identities=22%  Similarity=0.310  Sum_probs=69.0

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCcccC-
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVRG-  291 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~I~~-  291 (368)
                      .+..+.||+|+|+|.|.+ |+.+++.|...|++|+++.+..             .++.+.++++|+||.++|.++++.. 
T Consensus       268 ~~~~l~GktV~IiG~G~I-G~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~  346 (494)
T 3ce6_A          268 TDALIGGKKVLICGYGDV-GKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLE  346 (494)
T ss_dssp             HCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSSCSBCHH
T ss_pred             cCCCCCcCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCHHHHHHH
Confidence            455789999999999875 9999999999999999998653             2456778899999999999988864 


Q ss_pred             --CCcCCCcEEEEeecCCC
Q 017679          292 --SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 --e~ik~gavVIDvg~n~~  308 (368)
                        +.+++|++++++|....
T Consensus       347 ~l~~mk~ggilvnvG~~~~  365 (494)
T 3ce6_A          347 HIKAMKDHAILGNIGHFDN  365 (494)
T ss_dssp             HHHHSCTTCEEEECSSSGG
T ss_pred             HHHhcCCCcEEEEeCCCCC
Confidence              45799999999997543

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=98.03  E-value=5.2e-06  Score=81.04  Aligned_cols=135  Identities=20%  Similarity=0.199  Sum_probs=91.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCC----CCcc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANLV  289 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~----p~~I  289 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.             .++.+.+++||+|+.+++.    .+++
T Consensus       140 ~~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li  218 (330)
T 4e5n_A          140 GTGLDNATVGFLGMGAI-GLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLV  218 (330)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred             CCccCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHh
Confidence            45789999999999987 9999999999999999998764             2567889999999999873    2356


Q ss_pred             cC---CCcCCCcEEEEeecCCCCCCCCCCC----CCCcEEE---cccchhh---------------hhccceEeccCCCc
Q 017679          290 RG---SWLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLM---GDVCYEE---------------AMRLASVITPVPGG  344 (368)
Q Consensus       290 ~~---e~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~---GDVd~~~---------------~~~~a~~iTPVPGG  344 (368)
                      ..   ..+|+|+++||+|.-...   |...    -..+++-   =||-..+               ..-..-.+||=-||
T Consensus       219 ~~~~l~~mk~gailIN~arg~~v---d~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~  295 (330)
T 4e5n_A          219 NAELLALVRPGALLVNPCRGSVV---DEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGS  295 (330)
T ss_dssp             CHHHHTTSCTTEEEEECSCGGGB---CHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTT
T ss_pred             CHHHHhhCCCCcEEEECCCCchh---CHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCC
Confidence            54   357899999999965432   1000    0012222   2443222               00124568998888


Q ss_pred             ccHHHHHHHHHHHHHHHHHHh
Q 017679          345 VGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       345 VGp~T~amLl~N~v~a~~~~~  365 (368)
                      .-.-+..-+...+++..++++
T Consensus       296 ~t~e~~~~~~~~~~~ni~~~~  316 (330)
T 4e5n_A          296 AVRAVRLEIERCAAQNILQAL  316 (330)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHH
Confidence            876666666666665555443

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=98.03  E-value=8.2e-06  Score=80.44  Aligned_cols=81  Identities=14%  Similarity=0.261  Sum_probs=67.7

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC-C---Cc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV-A---NL  288 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~-p---~~  288 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.              .++.+.+++||+|+.+++. |   ++
T Consensus       159 ~~~l~gktvGIIG~G~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~l  237 (351)
T 3jtm_A          159 AYDLEGKTIGTVGAGRI-GKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGM  237 (351)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred             cccccCCEEeEEEeCHH-HHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHh
Confidence            56899999999999987 9999999999999999998652              3688899999999999873 2   35


Q ss_pred             ccCC---CcCCCcEEEEeecCCC
Q 017679          289 VRGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       289 I~~e---~ik~gavVIDvg~n~~  308 (368)
                      +..+   .+|+|+++||++.-..
T Consensus       238 i~~~~l~~mk~gailIN~aRG~~  260 (351)
T 3jtm_A          238 FNKELIGKLKKGVLIVNNARGAI  260 (351)
T ss_dssp             BSHHHHHHSCTTEEEEECSCGGG
T ss_pred             hcHHHHhcCCCCCEEEECcCchh
Confidence            6554   4689999999996554

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=98.02  E-value=6.6e-06  Score=80.16  Aligned_cols=80  Identities=19%  Similarity=0.250  Sum_probs=65.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------CHhhhccCCCEEEEecCC----CCcccC--
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NPEQITSEADIVIAAAGV----ANLVRG--  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------~L~~~~~~ADIVIsAvG~----p~~I~~--  291 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|++++++..          ++.+.+++||+|+.+++.    .+++..  
T Consensus       142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~  220 (331)
T 1xdw_A          142 KEVRNCTVGVVGLGRI-GRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDF  220 (331)
T ss_dssp             CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHH
T ss_pred             cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHH
Confidence            4689999999999986 99999999999999999886542          577888999999998873    245643  


Q ss_pred             -CCcCCCcEEEEeecCCC
Q 017679          292 -SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 -e~ik~gavVIDvg~n~~  308 (368)
                       +.+|+|+++||+|....
T Consensus       221 l~~mk~ga~lin~srg~~  238 (331)
T 1xdw_A          221 LKKMKDGAILVNCARGQL  238 (331)
T ss_dssp             HHTSCTTEEEEECSCGGG
T ss_pred             HhhCCCCcEEEECCCccc
Confidence             35799999999996543

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=98.02  E-value=7e-06  Score=80.63  Aligned_cols=137  Identities=21%  Similarity=0.244  Sum_probs=86.2

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC----CCcccCC-
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRGS-  292 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~----p~~I~~e-  292 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.         .++.+.+++||+|+.+++.    .+++..+ 
T Consensus       166 ~~~l~gktiGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~  244 (340)
T 4dgs_A          166 GHSPKGKRIGVLGLGQI-GRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASL  244 (340)
T ss_dssp             CCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHH
T ss_pred             cccccCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHH
Confidence            35899999999999987 9999999999999999988753         3688999999999999873    2345443 


Q ss_pred             --CcCCCcEEEEeecCCCCCCCCCCC--CCCcEEEc---ccchhh------h-hccceEeccCCCcccHHHHHHHHHHHH
Q 017679          293 --WLKPGAVVLDVGTCPVDVSVDPSC--EYGYRLMG---DVCYEE------A-MRLASVITPVPGGVGPMTVAMLLSNTL  358 (368)
Q Consensus       293 --~ik~gavVIDvg~n~~~~~~d~t~--~~~~kl~G---DVd~~~------~-~~~a~~iTPVPGGVGp~T~amLl~N~v  358 (368)
                        .+|+|+++||++.-...+. +...  -..|++-|   ||-..+      . .-..-.+||=-||.-.-+..-+...++
T Consensus       245 l~~mk~gailIN~aRG~vvde-~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~  323 (340)
T 4dgs_A          245 LQALGPEGIVVNVARGNVVDE-DALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVL  323 (340)
T ss_dssp             HHHTTTTCEEEECSCC---------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHHHHHHHH
T ss_pred             HhcCCCCCEEEECCCCcccCH-HHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHHHHHHHH
Confidence              4689999999997654311 0000  01223322   542111      0 011346888888887666555555555


Q ss_pred             HHHHHHh
Q 017679          359 DSAKRAY  365 (368)
Q Consensus       359 ~a~~~~~  365 (368)
                      +...+++
T Consensus       324 ~nl~~~~  330 (340)
T 4dgs_A          324 ANLAAHF  330 (340)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5444443

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=98.01  E-value=4.8e-05  Score=75.39  Aligned_cols=134  Identities=15%  Similarity=0.171  Sum_probs=89.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCC----CCcccC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVRG  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~----p~~I~~  291 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|+.++++.            .++.+.+++||+|+.+++.    .+++..
T Consensus       172 ~~l~gktvGIIGlG~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~  250 (365)
T 4hy3_A          172 RLIAGSEIGIVGFGDL-GKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGA  250 (365)
T ss_dssp             CCSSSSEEEEECCSHH-HHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCH
T ss_pred             cccCCCEEEEecCCcc-cHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCH
Confidence            5688999999999987 9999999999999999988652            2577889999999998873    235654


Q ss_pred             C---CcCCCcEEEEeecCCCCCCCCCCC----CCCcEE--Ecccchhh--------hhccceEeccCCCcccHHHHHHHH
Q 017679          292 S---WLKPGAVVLDVGTCPVDVSVDPSC----EYGYRL--MGDVCYEE--------AMRLASVITPVPGGVGPMTVAMLL  354 (368)
Q Consensus       292 e---~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl--~GDVd~~~--------~~~~a~~iTPVPGGVGp~T~amLl  354 (368)
                      +   .+|+|+++||++.-...   |...    -..|++  .=||-..+        ..-..-.+||=-||.-.-+...+.
T Consensus       251 ~~l~~mk~gailIN~aRG~~v---de~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~  327 (365)
T 4hy3_A          251 EAFSSMRRGAAFILLSRADVV---DFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMG  327 (365)
T ss_dssp             HHHHTSCTTCEEEECSCGGGS---CHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHH
T ss_pred             HHHhcCCCCcEEEECcCCchh---CHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHH
Confidence            4   46999999999954332   0000    000111  11221110        001134689988998877777666


Q ss_pred             HHHHHHHHHHh
Q 017679          355 SNTLDSAKRAY  365 (368)
Q Consensus       355 ~N~v~a~~~~~  365 (368)
                      ..+++..++++
T Consensus       328 ~~~~~ni~~~~  338 (365)
T 4hy3_A          328 DMVLEDMDLMD  338 (365)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66666666554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.99  E-value=1.3e-05  Score=79.25  Aligned_cols=78  Identities=29%  Similarity=0.408  Sum_probs=62.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecCCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .+.|++|+|+|.|++ |+.++..+...|++|+++.++..                     ++.+.++++|+||.++|.|.
T Consensus       165 ~l~g~~V~ViG~G~i-G~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~  243 (377)
T 2vhw_A          165 GVEPADVVVIGAGTA-GYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG  243 (377)
T ss_dssp             TBCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred             CCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence            478999999999775 99999999999999999986521                     23455678999999998654


Q ss_pred             -----cccC---CCcCCCcEEEEeecCC
Q 017679          288 -----LVRG---SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 -----~I~~---e~ik~gavVIDvg~n~  307 (368)
                           ++..   +.+++|.++||+|..+
T Consensus       244 ~~t~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          244 AKAPKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             SCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             CCCcceecHHHHhcCCCCcEEEEEecCC
Confidence                 3443   3568999999999754

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=97.98  E-value=9.1e-06  Score=78.57  Aligned_cols=134  Identities=15%  Similarity=0.171  Sum_probs=90.2

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------CHhhhccCCCEEEEecCC----CCccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGV----ANLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------~L~~~~~~ADIVIsAvG~----p~~I~  290 (368)
                      +.++.||++.|||.|.+ |+++|..|...|++|++++++..            ++.+.+++||+|+.+++.    .+++.
T Consensus       137 ~~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~  215 (313)
T 2ekl_A          137 GLELAGKTIGIVGFGRI-GTKVGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIID  215 (313)
T ss_dssp             CCCCTTCEEEEESCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBC
T ss_pred             CCCCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhC
Confidence            46899999999999986 99999999999999999987542            567888999999999873    23454


Q ss_pred             C---CCcCCCcEEEEeecCCCCCCCCCC--C--CCCcEEEc---ccc-------h---hhhhccceEeccCCCcccHHHH
Q 017679          291 G---SWLKPGAVVLDVGTCPVDVSVDPS--C--EYGYRLMG---DVC-------Y---EEAMRLASVITPVPGGVGPMTV  350 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~~~~~d~t--~--~~~~kl~G---DVd-------~---~~~~~~a~~iTPVPGGVGp~T~  350 (368)
                      .   +.+|+|+++||++.....   |..  .  -..+++-|   ||-       .   +-.....-.+||-.+|.-.-+.
T Consensus       216 ~~~l~~mk~ga~lIn~arg~~v---d~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~  292 (313)
T 2ekl_A          216 YPQFELMKDNVIIVNTSRAVAV---NGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQ  292 (313)
T ss_dssp             HHHHHHSCTTEEEEESSCGGGB---CHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHH
T ss_pred             HHHHhcCCCCCEEEECCCCccc---CHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHH
Confidence            3   346899999999976543   110  0  00123322   331       1   1111234578999898776665


Q ss_pred             HHHHHHHHHHHHHH
Q 017679          351 AMLLSNTLDSAKRA  364 (368)
Q Consensus       351 amLl~N~v~a~~~~  364 (368)
                      .-+...+++..+++
T Consensus       293 ~~~~~~~~~n~~~~  306 (313)
T 2ekl_A          293 KRVAEMTTQNLLNA  306 (313)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            55555555444443

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=97.98  E-value=1.2e-05  Score=77.64  Aligned_cols=133  Identities=21%  Similarity=0.231  Sum_probs=90.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------CCHhhhccCCCEEEEecCCC----CcccC---CC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------KNPEQITSEADIVIAAAGVA----NLVRG---SW  293 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------~~L~~~~~~ADIVIsAvG~p----~~I~~---e~  293 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|++++++.       .++.+.+++||+|+.+++..    +++..   ..
T Consensus       140 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~  218 (311)
T 2cuk_A          140 LDLQGLTLGLVGMGRI-GQAVAKRALAFGMRVVYHARTPKPLPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFA  218 (311)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSSSCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTT
T ss_pred             cCCCCCEEEEEEECHH-HHHHHHHHHHCCCEEEEECCCCcccccccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhh
Confidence            4789999999999987 9999999999999999998754       25788899999999998642    34542   35


Q ss_pred             cCCCcEEEEeecCCCCCCCCCC----CCCCcEEEc---ccchhh--------hhccceEeccCCCcccHHHHHHHHHHHH
Q 017679          294 LKPGAVVLDVGTCPVDVSVDPS----CEYGYRLMG---DVCYEE--------AMRLASVITPVPGGVGPMTVAMLLSNTL  358 (368)
Q Consensus       294 ik~gavVIDvg~n~~~~~~d~t----~~~~~kl~G---DVd~~~--------~~~~a~~iTPVPGGVGp~T~amLl~N~v  358 (368)
                      +|+|+++||++.....   |..    .-. +++-|   ||-..+        .....-.+||-.+|.-.-+..-+...++
T Consensus       219 mk~ga~lin~srg~~v---d~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~  294 (311)
T 2cuk_A          219 MKRGAILLNTARGALV---DTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAV  294 (311)
T ss_dssp             SCTTCEEEECSCGGGB---CHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHH
T ss_pred             CCCCcEEEECCCCCcc---CHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHH
Confidence            7899999999976543   110    001 12211   332100        1113557899999887666555555555


Q ss_pred             HHHHHHh
Q 017679          359 DSAKRAY  365 (368)
Q Consensus       359 ~a~~~~~  365 (368)
                      +..++++
T Consensus       295 ~nl~~~~  301 (311)
T 2cuk_A          295 ENLLAVL  301 (311)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5555443

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=97.97  E-value=1.3e-05  Score=79.30  Aligned_cols=81  Identities=25%  Similarity=0.322  Sum_probs=67.5

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC--------------CCHhhhccCCCEEEEecCCC----C
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT--------------KNPEQITSEADIVIAAAGVA----N  287 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t--------------~~L~~~~~~ADIVIsAvG~p----~  287 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++ |+.++++.              .++.+.+++||+|+.+++..    +
T Consensus       159 ~~~l~g~tvgIIG~G~I-G~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~  237 (364)
T 2j6i_A          159 AYDIEGKTIATIGAGRI-GYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKG  237 (364)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTT
T ss_pred             cccCCCCEEEEECcCHH-HHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHH
Confidence            56899999999999987 99999999999996 99988643              26778899999999999743    4


Q ss_pred             cccC---CCcCCCcEEEEeecCCC
Q 017679          288 LVRG---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       288 ~I~~---e~ik~gavVIDvg~n~~  308 (368)
                      ++..   ..+|+|+++||++....
T Consensus       238 li~~~~l~~mk~ga~lIn~arG~~  261 (364)
T 2j6i_A          238 LINKELLSKFKKGAWLVNTARGAI  261 (364)
T ss_dssp             CBCHHHHTTSCTTEEEEECSCGGG
T ss_pred             HhCHHHHhhCCCCCEEEECCCCch
Confidence            5654   46799999999997654

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.97  E-value=9.6e-06  Score=78.21  Aligned_cols=134  Identities=17%  Similarity=0.193  Sum_probs=91.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------CHhhhccCCCEEEEecCC-C---CcccC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGV-A---NLVRG  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------~L~~~~~~ADIVIsAvG~-p---~~I~~  291 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|+.++++..            ++.+.+++||+|+.+++. +   +++..
T Consensus       138 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~  216 (307)
T 1wwk_A          138 IELEGKTIGIIGFGRI-GYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINE  216 (307)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCH
T ss_pred             cccCCceEEEEccCHH-HHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCH
Confidence            5799999999999987 99999999999999999987542            567888999999999873 2   34643


Q ss_pred             C---CcCCCcEEEEeecCCCCCCCCCC--C--CCCcEEE---cccch--------hhhhccceEeccCCCcccHHHHHHH
Q 017679          292 S---WLKPGAVVLDVGTCPVDVSVDPS--C--EYGYRLM---GDVCY--------EEAMRLASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       292 e---~ik~gavVIDvg~n~~~~~~d~t--~--~~~~kl~---GDVd~--------~~~~~~a~~iTPVPGGVGp~T~amL  353 (368)
                      +   .+|+|+++||++.....   |..  .  -..+++-   -||-.        +-.....-.+||-.||.-.-+..-+
T Consensus       217 ~~l~~mk~ga~lin~arg~~v---d~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~  293 (307)
T 1wwk_A          217 ERLKLMKKTAILINTSRGPVV---DTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERA  293 (307)
T ss_dssp             HHHHHSCTTCEEEECSCGGGB---CHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHH
T ss_pred             HHHhcCCCCeEEEECCCCccc---CHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHH
Confidence            3   46899999999986543   100  0  0011221   13311        0111234578999999887776666


Q ss_pred             HHHHHHHHHHHh
Q 017679          354 LSNTLDSAKRAY  365 (368)
Q Consensus       354 l~N~v~a~~~~~  365 (368)
                      ...+++..++++
T Consensus       294 ~~~~~~nl~~~~  305 (307)
T 1wwk_A          294 GVEVAEKVVKIL  305 (307)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            666666655544

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=97.96  E-value=9.4e-06  Score=79.18  Aligned_cols=134  Identities=18%  Similarity=0.173  Sum_probs=91.1

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------CHhhhccCCCEEEEecCC----CCcccC-
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NPEQITSEADIVIAAAGV----ANLVRG-  291 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------~L~~~~~~ADIVIsAvG~----p~~I~~-  291 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++..          ++.+.+++||+|+.+++.    .+++.. 
T Consensus       140 ~~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~  218 (333)
T 1dxy_A          140 GKELGQQTVGVMGTGHI-GQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEA  218 (333)
T ss_dssp             CCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHH
T ss_pred             ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHH
Confidence            35799999999999987 99999999999999999876532          577889999999999874    235644 


Q ss_pred             --CCcCCCcEEEEeecCCCCCCCCCCC----CCCcEEE---cccchhh--------------------h-hccceEeccC
Q 017679          292 --SWLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLM---GDVCYEE--------------------A-MRLASVITPV  341 (368)
Q Consensus       292 --e~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~---GDVd~~~--------------------~-~~~a~~iTPV  341 (368)
                        ..+|+|+++||+|.....   |...    -..+++-   =||-..+                    . .--.-.+||=
T Consensus       219 ~l~~mk~ga~lIn~srg~~v---d~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPH  295 (333)
T 1dxy_A          219 AFNLMKPGAIVINTARPNLI---DTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPH  295 (333)
T ss_dssp             HHHHSCTTEEEEECSCTTSB---CHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSS
T ss_pred             HHhhCCCCcEEEECCCCccc---CHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCc
Confidence              346999999999986543   1100    0023333   2443222                    0 0124578998


Q ss_pred             CCcccHHHHHHHHHHHHHHHHHH
Q 017679          342 PGGVGPMTVAMLLSNTLDSAKRA  364 (368)
Q Consensus       342 PGGVGp~T~amLl~N~v~a~~~~  364 (368)
                      -||.-.-+..-+...+++..+++
T Consensus       296 ia~~t~e~~~~~~~~~~~nl~~~  318 (333)
T 1dxy_A          296 IAYYTETAVHNMVYFSLQHLVDF  318 (333)
T ss_dssp             CTTCSHHHHHHHHHHHHHHHHHH
T ss_pred             cccChHHHHHHHHHHHHHHHHHH
Confidence            88887766555555555554443

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=97.93  E-value=9.4e-06  Score=80.00  Aligned_cols=135  Identities=14%  Similarity=0.134  Sum_probs=92.4

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCC-C---Ccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV-A---NLV  289 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~-p---~~I  289 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.             .++.+.+++||+|+.+++. +   +++
T Consensus       155 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li  233 (352)
T 3gg9_A          155 GRVLKGQTLGIFGYGKI-GQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSII  233 (352)
T ss_dssp             BCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred             CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhh
Confidence            45789999999999987 9999999999999999987642             3788899999999999873 2   356


Q ss_pred             cC---CCcCCCcEEEEeecCCCCCCCCCCC----CCCcEEEc---ccchhh--------hhccceEeccCCCcccHHHHH
Q 017679          290 RG---SWLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLMG---DVCYEE--------AMRLASVITPVPGGVGPMTVA  351 (368)
Q Consensus       290 ~~---e~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~G---DVd~~~--------~~~~a~~iTPVPGGVGp~T~a  351 (368)
                      ..   ..+|+|+++||+|.-...   |...    -..+++-|   ||-..+        ..-..-.+||=-||.-.-+..
T Consensus       234 ~~~~l~~mk~gailIN~aRg~~v---d~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~  310 (352)
T 3gg9_A          234 TVADLTRMKPTALFVNTSRAELV---EENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYE  310 (352)
T ss_dssp             CHHHHTTSCTTCEEEECSCGGGB---CTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHH
T ss_pred             CHHHHhhCCCCcEEEECCCchhh---cHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHH
Confidence            54   357999999999965432   1100    00012211   221111        111234689988888887777


Q ss_pred             HHHHHHHHHHHHHh
Q 017679          352 MLLSNTLDSAKRAY  365 (368)
Q Consensus       352 mLl~N~v~a~~~~~  365 (368)
                      .+...+++..++++
T Consensus       311 ~~~~~~~~ni~~~~  324 (352)
T 3gg9_A          311 MYFGIAFQNILDIL  324 (352)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            77766666666554

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=97.92  E-value=1.2e-05  Score=78.28  Aligned_cols=80  Identities=16%  Similarity=0.284  Sum_probs=66.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------CHhhhccCCCEEEEecCC----CCcccC-
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------NPEQITSEADIVIAAAGV----ANLVRG-  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------~L~~~~~~ADIVIsAvG~----p~~I~~-  291 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|++++++..           ++.+.+++||+|+.+++.    .+++.. 
T Consensus       142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~  220 (333)
T 1j4a_A          142 REVRDQVVGVVGTGHI-GQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDE  220 (333)
T ss_dssp             CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHH
T ss_pred             ccCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHH
Confidence            4789999999999987 99999999999999999886532           677888999999999873    234543 


Q ss_pred             --CCcCCCcEEEEeecCCC
Q 017679          292 --SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 --e~ik~gavVIDvg~n~~  308 (368)
                        +.+|+|+++||++....
T Consensus       221 ~l~~mk~ga~lIn~arg~~  239 (333)
T 1j4a_A          221 SIAKMKQDVVIVNVSRGPL  239 (333)
T ss_dssp             HHHHSCTTEEEEECSCGGG
T ss_pred             HHhhCCCCcEEEECCCCcc
Confidence              34689999999997654

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=97.91  E-value=2.1e-05  Score=76.26  Aligned_cols=75  Identities=21%  Similarity=0.305  Sum_probs=62.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCCC-------------------CHhhhccCCCEEEEecCCCCc
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALTK-------------------NPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t~-------------------~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      -..++++|||.|.. |+..+..|.. .+ .+|++++++ +                   ++++.+++|||||++|+....
T Consensus       119 ~~~~~v~iIGaG~~-a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~p  196 (313)
T 3hdj_A          119 PRSSVLGLFGAGTQ-GAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTTP  196 (313)
T ss_dssp             TTCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSSC
T ss_pred             CCCcEEEEECccHH-HHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCCc
Confidence            36789999999987 9999988876 34 589999886 2                   344567889999999987654


Q ss_pred             -ccCCCcCCCcEEEEeecC
Q 017679          289 -VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 -I~~e~ik~gavVIDvg~n  306 (368)
                       ++.+|+++|+.|+|+|..
T Consensus       197 vl~~~~l~~G~~V~~vGs~  215 (313)
T 3hdj_A          197 LFAGQALRAGAFVGAIGSS  215 (313)
T ss_dssp             SSCGGGCCTTCEEEECCCS
T ss_pred             ccCHHHcCCCcEEEECCCC
Confidence             688999999999999986

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=97.91  E-value=2.1e-05  Score=77.28  Aligned_cols=135  Identities=16%  Similarity=0.179  Sum_probs=90.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCC----Cccc
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVA----NLVR  290 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p----~~I~  290 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|++++++.             .++.+.+++||+|+.+++..    +++.
T Consensus       164 ~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~  242 (347)
T 1mx3_A          164 ARIRGETLGIIGLGRV-GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN  242 (347)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS
T ss_pred             cCCCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH
Confidence            4789999999999987 9999999999999999987643             25778889999999988742    3454


Q ss_pred             C---CCcCCCcEEEEeecCCCCCCCCCCC--CCCcEEEc---ccchhh--------hh-ccceEeccCCCcccHHHHHHH
Q 017679          291 G---SWLKPGAVVLDVGTCPVDVSVDPSC--EYGYRLMG---DVCYEE--------AM-RLASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~~~~~d~t~--~~~~kl~G---DVd~~~--------~~-~~a~~iTPVPGGVGp~T~amL  353 (368)
                      .   ..+|+|+++||++.....+.. ...  -..+++-|   ||-..+        .. -..-.+||=-+|...-+..-+
T Consensus       243 ~~~l~~mk~gailIN~arg~~vd~~-aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~  321 (347)
T 1mx3_A          243 DFTVKQMRQGAFLVNTARGGLVDEK-ALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEM  321 (347)
T ss_dssp             HHHHTTSCTTEEEEECSCTTSBCHH-HHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHH
T ss_pred             HHHHhcCCCCCEEEECCCChHHhHH-HHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHH
Confidence            3   357899999999987643100 000  00122222   222110        11 124567888888877776666


Q ss_pred             HHHHHHHHHHH
Q 017679          354 LSNTLDSAKRA  364 (368)
Q Consensus       354 l~N~v~a~~~~  364 (368)
                      ...+++..+++
T Consensus       322 ~~~~~~ni~~~  332 (347)
T 1mx3_A          322 REEAAREIRRA  332 (347)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66666655544

>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*

Probab=97.90  E-value=6.3e-05  Score=77.68  Aligned_cols=135  Identities=19%  Similarity=0.204  Sum_probs=90.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCCC----Cccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~p----~~I~  290 (368)
                      +.++.||++.|||.|.+ |+.+|..|.+.|++|+.++++.            .++.+.+++||+|+.+++..    +++.
T Consensus       137 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~  215 (529)
T 1ygy_A          137 GTEIFGKTVGVVGLGRI-GQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLID  215 (529)
T ss_dssp             BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred             ccccCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhC
Confidence            46799999999999986 9999999999999999997653            14667889999999999743    3454


Q ss_pred             C---CCcCCCcEEEEeecCCCCCCCCCCC----CCCcEEEc-ccchhh---------hhccceEeccCCCcccHHHHHHH
Q 017679          291 G---SWLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLMG-DVCYEE---------AMRLASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~G-DVd~~~---------~~~~a~~iTPVPGGVGp~T~amL  353 (368)
                      .   ..+|+|+++||++.-...   |...    -..+++-| .+|+-.         .....-.+||-.||.-+-+..-+
T Consensus       216 ~~~~~~~k~g~ilin~arg~iv---~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~  292 (529)
T 1ygy_A          216 KEALAKTKPGVIIVNAARGGLV---DEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRA  292 (529)
T ss_dssp             HHHHTTSCTTEEEEECSCTTSB---CHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHH
T ss_pred             HHHHhCCCCCCEEEECCCCchh---hHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHH
Confidence            3   467999999999954432   1100    00122321 112111         11123468999999887776665


Q ss_pred             HHHHHHHHHHHh
Q 017679          354 LSNTLDSAKRAY  365 (368)
Q Consensus       354 l~N~v~a~~~~~  365 (368)
                      ....++....++
T Consensus       293 ~~~~~~~l~~~l  304 (529)
T 1ygy_A          293 GTDVAESVRLAL  304 (529)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            555555555444

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=97.89  E-value=1.8e-05  Score=77.55  Aligned_cols=136  Identities=18%  Similarity=0.133  Sum_probs=90.5

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHh-hCCCEEEEEeCCCC--------------CHhhhccCCCEEEEecCCC----C
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALTK--------------NPEQITSEADIVIAAAGVA----N  287 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~-~~gAtVti~h~~t~--------------~L~~~~~~ADIVIsAvG~p----~  287 (368)
                      +.++.||++.|||.|.+ |+.+|..|. ..|++|++++++..              ++.+.+++||+|+.+++..    +
T Consensus       158 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~  236 (348)
T 2w2k_A          158 AHNPRGHVLGAVGLGAI-QKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHH  236 (348)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTT
T ss_pred             CcCCCCCEEEEEEECHH-HHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHH
Confidence            56899999999999986 999999999 99999999987532              5667789999999998742    3


Q ss_pred             cccC---CCcCCCcEEEEeecCCCCCCCCCCC--CCCcEEEc---ccchhh------h-hccceEeccCCCcccHHHHHH
Q 017679          288 LVRG---SWLKPGAVVLDVGTCPVDVSVDPSC--EYGYRLMG---DVCYEE------A-MRLASVITPVPGGVGPMTVAM  352 (368)
Q Consensus       288 ~I~~---e~ik~gavVIDvg~n~~~~~~d~t~--~~~~kl~G---DVd~~~------~-~~~a~~iTPVPGGVGp~T~am  352 (368)
                      ++..   ..+++|+++||++.....+. +...  -..+++.|   ||-..+      . .-..-.+||-.||.-.-+..-
T Consensus       237 li~~~~l~~mk~gailin~srg~~vd~-~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~  315 (348)
T 2w2k_A          237 LIDEAFFAAMKPGSRIVNTARGPVISQ-DALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIETFHE  315 (348)
T ss_dssp             CBCHHHHHHSCTTEEEEECSCGGGBCH-HHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEEECCSCTTCSHHHHHH
T ss_pred             HhhHHHHhcCCCCCEEEECCCCchhCH-HHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEEEcCcCCCCCHHHHHH
Confidence            4543   35789999999997643200 0000  00123432   442111      1 112346789888887766665


Q ss_pred             HHHHHHHHHHHH
Q 017679          353 LLSNTLDSAKRA  364 (368)
Q Consensus       353 Ll~N~v~a~~~~  364 (368)
                      +...+++..+++
T Consensus       316 ~~~~~~~ni~~~  327 (348)
T 2w2k_A          316 FERLTMTNIDRF  327 (348)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            555555555444

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=97.89  E-value=1.4e-05  Score=80.49  Aligned_cols=134  Identities=19%  Similarity=0.185  Sum_probs=90.7

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------CCHhhhccCCCEEEEecCC----CCcccCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV----ANLVRGS  292 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------~~L~~~~~~ADIVIsAvG~----p~~I~~e  292 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.+++..          .++.+.+++||+|+.+++.    .+++..+
T Consensus       151 ~~el~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~  229 (416)
T 3k5p_A          151 SREVRGKTLGIVGYGNI-GSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEA  229 (416)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHH
T ss_pred             CccCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHH
Confidence            46899999999999987 9999999999999999998642          3688999999999999874    2466554


Q ss_pred             ---CcCCCcEEEEeecCCCCCCCCCCC----CCCcEEEc---ccchhhh------------hccceEeccCCCcccHHHH
Q 017679          293 ---WLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLMG---DVCYEEA------------MRLASVITPVPGGVGPMTV  350 (368)
Q Consensus       293 ---~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~G---DVd~~~~------------~~~a~~iTPVPGGVGp~T~  350 (368)
                         .+|+|+++||++.-...   |...    -..|++-|   ||-..+=            .-..-.+||=-||.-.-+.
T Consensus       230 ~l~~mk~gailIN~aRG~vv---d~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~  306 (416)
T 3k5p_A          230 KLRKMKKGAFLINNARGSDV---DLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQ  306 (416)
T ss_dssp             HHHHSCTTEEEEECSCTTSB---CHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHH
T ss_pred             HHhhCCCCcEEEECCCChhh---hHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHH
Confidence               46999999999976543   1100    00123322   4321110            0112468888888876665


Q ss_pred             HHHHHHHHHHHHHH
Q 017679          351 AMLLSNTLDSAKRA  364 (368)
Q Consensus       351 amLl~N~v~a~~~~  364 (368)
                      .-+...+++...++
T Consensus       307 ~~~~~~~~~nl~~~  320 (416)
T 3k5p_A          307 ERIGTEVTRKLVEY  320 (416)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            55555555544444

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=97.89  E-value=1.5e-05  Score=77.99  Aligned_cols=136  Identities=18%  Similarity=0.212  Sum_probs=88.1

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCCC----CcccCC-
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGVA----NLVRGS-  292 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~p----~~I~~e-  292 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|++++++.         .++.+.+++||+|+.+++..    +++..+ 
T Consensus       159 ~~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~  237 (333)
T 3ba1_A          159 TTKFSGKRVGIIGLGRI-GLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREV  237 (333)
T ss_dssp             CCCCTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHH
T ss_pred             ccccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHH
Confidence            35799999999999987 9999999999999999998653         36778899999999999742    345432 


Q ss_pred             --CcCCCcEEEEeecCCCCCCCCCCC--CCCcEE---Ecccchh------hhhc-cceEeccCCCcccHHHHHHHHHHHH
Q 017679          293 --WLKPGAVVLDVGTCPVDVSVDPSC--EYGYRL---MGDVCYE------EAMR-LASVITPVPGGVGPMTVAMLLSNTL  358 (368)
Q Consensus       293 --~ik~gavVIDvg~n~~~~~~d~t~--~~~~kl---~GDVd~~------~~~~-~a~~iTPVPGGVGp~T~amLl~N~v  358 (368)
                        .+++|+++||++.-...+. +...  -..+++   .=||-..      ...+ ..-.+||=.||.-.-+..-+...++
T Consensus       238 l~~mk~gailIn~srG~~vd~-~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~  316 (333)
T 3ba1_A          238 IDALGPKGVLINIGRGPHVDE-PELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVV  316 (333)
T ss_dssp             HHHHCTTCEEEECSCGGGBCH-HHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHHHHHHHHHH
T ss_pred             HhcCCCCCEEEECCCCchhCH-HHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHHHHHHHHHH
Confidence              4689999999986543200 0000  000111   1133210      1111 2336788888877666555555555


Q ss_pred             HHHHHH
Q 017679          359 DSAKRA  364 (368)
Q Consensus       359 ~a~~~~  364 (368)
                      +..+++
T Consensus       317 ~nl~~~  322 (333)
T 3ba1_A          317 GNLEAH  322 (333)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            554444

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=97.85  E-value=3.8e-05  Score=76.85  Aligned_cols=134  Identities=16%  Similarity=0.181  Sum_probs=89.4

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC----CCc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV----ANL  288 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~----p~~  288 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.              .++.+.+++||+|+.+++.    .++
T Consensus       186 ~~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~l  264 (393)
T 2nac_A          186 AYDLEAMHVGTVAAGRI-GLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHM  264 (393)
T ss_dssp             CCCCTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred             CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHH
Confidence            45799999999999997 9999999999999999987652              2577889999999999873    245


Q ss_pred             ccC---CCcCCCcEEEEeecCCCCCCCCCC--C--CCCcEEE---cccchhhh--------hccceEeccCCCcccHHHH
Q 017679          289 VRG---SWLKPGAVVLDVGTCPVDVSVDPS--C--EYGYRLM---GDVCYEEA--------MRLASVITPVPGGVGPMTV  350 (368)
Q Consensus       289 I~~---e~ik~gavVIDvg~n~~~~~~d~t--~--~~~~kl~---GDVd~~~~--------~~~a~~iTPVPGGVGp~T~  350 (368)
                      +..   ..+|+|+++||++.-...   |..  .  -..+++-   -||-..+-        ....-.+||=.||.-.-+.
T Consensus       265 i~~~~l~~mk~gailIN~aRG~~v---de~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~  341 (393)
T 2nac_A          265 INDETLKLFKRGAYIVNTARGKLC---DRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQ  341 (393)
T ss_dssp             BSHHHHTTSCTTEEEEECSCGGGB---CHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHH
T ss_pred             hhHHHHhhCCCCCEEEECCCchHh---hHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHH
Confidence            643   467999999999976543   110  0  0012333   24422110        0113468888888776555


Q ss_pred             HHHHHHHHHHHHHH
Q 017679          351 AMLLSNTLDSAKRA  364 (368)
Q Consensus       351 amLl~N~v~a~~~~  364 (368)
                      .-+...+++..+++
T Consensus       342 ~~~~~~~~~nl~~~  355 (393)
T 2nac_A          342 ARYAAGTREILECF  355 (393)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            54444444444433

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=97.84  E-value=2.5e-05  Score=76.05  Aligned_cols=135  Identities=20%  Similarity=0.207  Sum_probs=89.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------CHhhhccCCCEEEEecCCC----Cccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGVA----NLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------~L~~~~~~ADIVIsAvG~p----~~I~  290 (368)
                      +.++.|+++.|||.|.+ |+.+|..|...|++|++++++..            ++.+.+++||+||.+++..    +++.
T Consensus       145 ~~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~  223 (334)
T 2dbq_A          145 GYDVYGKTIGIIGLGRI-GQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLIN  223 (334)
T ss_dssp             CCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred             ccCCCCCEEEEEccCHH-HHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhC
Confidence            35799999999999886 99999999999999999887532            5667789999999999743    3454


Q ss_pred             C---CCcCCCcEEEEeecCCCCCCCCCCC----CCCcEEEc---ccchhh-------hhccceEeccCCCcccHHHHHHH
Q 017679          291 G---SWLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLMG---DVCYEE-------AMRLASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~G---DVd~~~-------~~~~a~~iTPVPGGVGp~T~amL  353 (368)
                      .   ..+++|+++||++.-...   |...    -..+++-|   ||-..+       .....-.+||-.||.-.-+..-+
T Consensus       224 ~~~~~~mk~~ailIn~srg~~v---~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~~~  300 (334)
T 2dbq_A          224 EERLKLMKKTAILINIARGKVV---DTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGM  300 (334)
T ss_dssp             HHHHHHSCTTCEEEECSCGGGB---CHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHHHH
T ss_pred             HHHHhcCCCCcEEEECCCCccc---CHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHHHH
Confidence            2   357899999999865432   1000    00112222   332111       11123467888888877666666


Q ss_pred             HHHHHHHHHHHh
Q 017679          354 LSNTLDSAKRAY  365 (368)
Q Consensus       354 l~N~v~a~~~~~  365 (368)
                      ...+++..++++
T Consensus       301 ~~~~~~n~~~~~  312 (334)
T 2dbq_A          301 AELVAKNLIAFK  312 (334)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            555555555443

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=97.82  E-value=3.4e-05  Score=74.86  Aligned_cols=80  Identities=15%  Similarity=0.246  Sum_probs=64.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhccCCCEEEEecCCC----Cccc
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGVA----NLVR  290 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~~ADIVIsAvG~p----~~I~  290 (368)
                      .++.|+++.|||.|.+ |+++|..|...|++|++++++..             ++.+.+++||+||.+++..    +++.
T Consensus       151 ~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~  229 (330)
T 2gcg_A          151 YGLTQSTVGIIGLGRI-GQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCN  229 (330)
T ss_dssp             CCCTTCEEEEECCSHH-HHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred             cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhC
Confidence            5689999999999886 99999999999999999986532             4667789999999999743    3454


Q ss_pred             C---CCcCCCcEEEEeecCCC
Q 017679          291 G---SWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~~  308 (368)
                      .   +.+++|+++||++....
T Consensus       230 ~~~~~~mk~gailIn~srg~~  250 (330)
T 2gcg_A          230 KDFFQKMKETAVFINISRGDV  250 (330)
T ss_dssp             HHHHHHSCTTCEEEECSCGGG
T ss_pred             HHHHhcCCCCcEEEECCCCcc
Confidence            2   35789999999987643

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=97.80  E-value=2.8e-05  Score=78.01  Aligned_cols=81  Identities=20%  Similarity=0.309  Sum_probs=67.6

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------CCHhhhccCCCEEEEecCCC----CcccCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGVA----NLVRGS  292 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------~~L~~~~~~ADIVIsAvG~p----~~I~~e  292 (368)
                      +.++.||++.|||.|.+ |+.+|..|...|++|+.++++.          .++.+.+++||+|+..++..    +++..+
T Consensus       140 ~~el~gktlGiIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~  218 (404)
T 1sc6_A          140 SFEARGKKLGIIGYGHI-GTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAK  218 (404)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHH
T ss_pred             ccccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHH
Confidence            46899999999999987 9999999999999999987642          36888999999999998742    356543


Q ss_pred             ---CcCCCcEEEEeecCCC
Q 017679          293 ---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       293 ---~ik~gavVIDvg~n~~  308 (368)
                         .+|+|+++||++.-..
T Consensus       219 ~l~~mk~ga~lIN~aRg~~  237 (404)
T 1sc6_A          219 EISLMKPGSLLINASRGTV  237 (404)
T ss_dssp             HHHHSCTTEEEEECSCSSS
T ss_pred             HHhhcCCCeEEEECCCChH
Confidence               4699999999997654

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=97.80  E-value=3.3e-05  Score=75.28  Aligned_cols=132  Identities=17%  Similarity=0.221  Sum_probs=87.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------CHhhhccCCCEEEEecCCC----CcccC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGVA----NLVRG  291 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------~L~~~~~~ADIVIsAvG~p----~~I~~  291 (368)
                      .++.||++.|||.|.+ |+.+|..|...|++|++++++..            ++.+.+++||+|+.+++..    +++..
T Consensus       142 ~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~  220 (333)
T 2d0i_A          142 ESLYGKKVGILGMGAI-GKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINE  220 (333)
T ss_dssp             CCSTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCH
T ss_pred             CCCCcCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCH
Confidence            6899999999999986 99999999999999999887542            5667789999999999854    34543


Q ss_pred             ---CCcCCCcEEEEeecCCCCCCCCCCC----CCCcEE---Ecccchh------hhhc-c-ceEeccCCCcccHHHHHHH
Q 017679          292 ---SWLKPGAVVLDVGTCPVDVSVDPSC----EYGYRL---MGDVCYE------EAMR-L-ASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       292 ---e~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl---~GDVd~~------~~~~-~-a~~iTPVPGGVGp~T~amL  353 (368)
                         ..+++| ++||++.....   |...    -..+++   --||--.      ...+ . .-.+||-.||.-.-+..-+
T Consensus       221 ~~~~~mk~g-ilin~srg~~v---d~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~~~~  296 (333)
T 2d0i_A          221 ERVKKLEGK-YLVNIGRGALV---DEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDV  296 (333)
T ss_dssp             HHHHHTBTC-EEEECSCGGGB---CHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHHHHH
T ss_pred             HHHhhCCCC-EEEECCCCccc---CHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHHHHH
Confidence               357899 99999965432   1100    001111   1133110      0111 2 3467888888877666655


Q ss_pred             HHHHHHHHHHH
Q 017679          354 LSNTLDSAKRA  364 (368)
Q Consensus       354 l~N~v~a~~~~  364 (368)
                      ...+++..+++
T Consensus       297 ~~~~~~n~~~~  307 (333)
T 2d0i_A          297 GFRAVENLLKV  307 (333)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            55555555544

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=97.77  E-value=5.9e-05  Score=72.48  Aligned_cols=77  Identities=18%  Similarity=0.330  Sum_probs=62.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhC-CC-EEEEEeCCC-----------------CCHhhhccCCCEEEEecCCCC-c
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALT-----------------KNPEQITSEADIVIAAAGVAN-L  288 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~-gA-tVti~h~~t-----------------~~L~~~~~~ADIVIsAvG~p~-~  288 (368)
                      ...++++.|||.|.. |+.++..|.+. |. +|++++++.                 .++++.+++||+||++++... +
T Consensus       132 ~~~~~~igiIG~G~~-g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~~~v  210 (312)
T 2i99_A          132 PPSSEVLCILGAGVQ-AYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPI  210 (312)
T ss_dssp             CTTCCEEEEECCSHH-HHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCSSCC
T ss_pred             CCCCcEEEEECCcHH-HHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCCCcc
Confidence            567899999999986 99999988765 76 899998752                 356677889999999998544 3


Q ss_pred             ccCCCcCCCcEEEEeecC
Q 017679          289 VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 I~~e~ik~gavVIDvg~n  306 (368)
                      +..+++++|.+|+|+|..
T Consensus       211 ~~~~~l~~g~~vi~~g~~  228 (312)
T 2i99_A          211 LFGEWVKPGAHINAVGAS  228 (312)
T ss_dssp             BCGGGSCTTCEEEECCCC
T ss_pred             cCHHHcCCCcEEEeCCCC
Confidence            566899999999999754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.76  E-value=1.7e-05  Score=77.90  Aligned_cols=78  Identities=29%  Similarity=0.388  Sum_probs=58.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecCCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .+.|++|+|+|.|+ +|+.++..|...|++|+++.++..                     ++.+.++.+|+||.++|.+.
T Consensus       163 ~l~~~~V~ViGaG~-iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~  241 (369)
T 2eez_A          163 GVAPASVVILGGGT-VGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG  241 (369)
T ss_dssp             BBCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence            47899999999976 599999999999999999987531                     23355678999999998653


Q ss_pred             -----cccC---CCcCCCcEEEEeecCC
Q 017679          288 -----LVRG---SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 -----~I~~---e~ik~gavVIDvg~n~  307 (368)
                           ++..   +.+++|.++||++...
T Consensus       242 ~~~~~li~~~~l~~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          242 AKAPKLVTRDMLSLMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             ----CCSCHHHHTTSCTTCEEEECC---
T ss_pred             cccchhHHHHHHHhhcCCCEEEEEecCC
Confidence                 3443   3468899999999753

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=97.73  E-value=0.00011  Score=72.09  Aligned_cols=77  Identities=13%  Similarity=0.179  Sum_probs=62.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ...++++.|||.|.. |+..+..|.. .+ .+|++++++.                     .++++.+++|||||++|+.
T Consensus       126 ~~~~~~v~iIGaG~~-a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps  204 (350)
T 1x7d_A          126 RPNARKMALIGNGAQ-SEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTAD  204 (350)
T ss_dssp             CTTCCEEEEECCSTT-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCC
T ss_pred             cccCCeEEEECCcHH-HHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccC
Confidence            357899999999987 9998877643 44 5899998751                     2456778899999999987


Q ss_pred             CC---cccCCCcCCCcEEEEeecC
Q 017679          286 AN---LVRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       286 p~---~I~~e~ik~gavVIDvg~n  306 (368)
                      +.   ++..+|+++|..|+++|..
T Consensus       205 ~~~~pvl~~~~l~~G~~V~~vgs~  228 (350)
T 1x7d_A          205 KAYATIITPDMLEPGMHLNAVGGD  228 (350)
T ss_dssp             SSEEEEECGGGCCTTCEEEECSCC
T ss_pred             CCCCceecHHHcCCCCEEEECCCC
Confidence            52   4788999999999999964

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=97.71  E-value=8.1e-05  Score=72.03  Aligned_cols=75  Identities=15%  Similarity=0.226  Sum_probs=60.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC-------------------CCHhhhccCCCEEEEecCCCCc
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT-------------------KNPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t-------------------~~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      ...+++.|||.|.. |+..+..|.. .+ .+|++++++.                   .++++.+ ++|+||++|+....
T Consensus       123 ~~~~~v~iIGaG~~-a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~p  200 (322)
T 1omo_A          123 KNSSVFGFIGCGTQ-AYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRKP  200 (322)
T ss_dssp             TTCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSSC
T ss_pred             CCCCEEEEEcCcHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCCc
Confidence            46889999999987 9999988876 34 5899998762                   2455667 89999999986554


Q ss_pred             -ccCCCcCCCcEEEEeecC
Q 017679          289 -VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 -I~~e~ik~gavVIDvg~n  306 (368)
                       ++.+|+++|..|+|+|..
T Consensus       201 v~~~~~l~~G~~V~~ig~~  219 (322)
T 1omo_A          201 VVKAEWVEEGTHINAIGAD  219 (322)
T ss_dssp             CBCGGGCCTTCEEEECSCC
T ss_pred             eecHHHcCCCeEEEECCCC
Confidence             678999999999999743

>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}

Probab=97.67  E-value=5.2e-05  Score=74.09  Aligned_cols=134  Identities=16%  Similarity=0.190  Sum_probs=92.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------CCHhhhccCCCEEEEecCC----CCcccC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGV----ANLVRG  291 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------~~L~~~~~~ADIVIsAvG~----p~~I~~  291 (368)
                      +.++.||++.|||.|.+ |+.+|..+...|++|..+++..           .++.+.+++||||+..++-    -++|..
T Consensus       136 ~~~l~g~tvGIiG~G~I-G~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~  214 (334)
T 3kb6_A          136 ARELNRLTLGVIGTGRI-GSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINE  214 (334)
T ss_dssp             BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred             cceecCcEEEEECcchH-HHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCH
Confidence            35789999999999997 9999999999999999887653           3688899999999988862    346766


Q ss_pred             C---CcCCCcEEEEeecCCCCCCCCCCC----CCCcEEEc---ccchhhh-----------------------hccceEe
Q 017679          292 S---WLKPGAVVLDVGTCPVDVSVDPSC----EYGYRLMG---DVCYEEA-----------------------MRLASVI  338 (368)
Q Consensus       292 e---~ik~gavVIDvg~n~~~~~~d~t~----~~~~kl~G---DVd~~~~-----------------------~~~a~~i  338 (368)
                      +   .+|+|+++|.+|--.+-   |...    -+.|++-|   ||-..|=                       ..-.-.+
T Consensus       215 ~~l~~mk~~a~lIN~aRG~iV---de~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvil  291 (334)
T 3kb6_A          215 ERISLMKDGVYLINTARGKVV---DTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVII  291 (334)
T ss_dssp             HHHHHSCTTEEEEECSCGGGB---CHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEE
T ss_pred             HHHhhcCCCeEEEecCccccc---cHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEE
Confidence            5   46999999999976543   1100    01346655   6632220                       0012368


Q ss_pred             ccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679          339 TPVPGGVGPMTVAMLLSNTLDSAKRA  364 (368)
Q Consensus       339 TPVPGGVGp~T~amLl~N~v~a~~~~  364 (368)
                      ||=-||.-.-+..-+.+.+++..+++
T Consensus       292 TPHia~~T~ea~~~~~~~~~~ni~~~  317 (334)
T 3kb6_A          292 TPHIAYYTDKSLERIREETVKVVKAF  317 (334)
T ss_dssp             CCSCTTCBHHHHHHHHHHHHHHHHHH
T ss_pred             CCchhhChHHHHHHHHHHHHHHHHHH
Confidence            99888877655555555555554443

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.66  E-value=1.9e-05  Score=72.93  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=56.6

Q ss_pred             HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC-----------------------------Hhhhcc
Q 017679          224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-----------------------------PEQITS  274 (368)
Q Consensus       224 ~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~-----------------------------L~~~~~  274 (368)
                      ++...++.++++.|||.|.+ |.+++..|.+.|.+|++++++...                             +.+.++
T Consensus        11 ~~~~~~~~~~kIgiIG~G~m-G~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~   89 (245)
T 3dtt_A           11 HHENLYFQGMKIAVLGTGTV-GRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAA   89 (245)
T ss_dssp             --------CCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHH
T ss_pred             cccccccCCCeEEEECCCHH-HHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHh
Confidence            35567889999999999886 999999999999999999875322                             235567


Q ss_pred             CCCEEEEecCCCCc---cc---CCCcCCCcEEEEee
Q 017679          275 EADIVIAAAGVANL---VR---GSWLKPGAVVLDVG  304 (368)
Q Consensus       275 ~ADIVIsAvG~p~~---I~---~e~ik~gavVIDvg  304 (368)
                      +||+||.+++....   +.   ...+ +|.+|||++
T Consensus        90 ~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s  124 (245)
T 3dtt_A           90 GAELVVNATEGASSIAALTAAGAENL-AGKILVDIA  124 (245)
T ss_dssp             HCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECC
T ss_pred             cCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECC
Confidence            89999999986542   21   2234 799999998

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.60  E-value=6.4e-05  Score=72.19  Aligned_cols=77  Identities=18%  Similarity=0.346  Sum_probs=62.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----ccC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VRG  291 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I~~  291 (368)
                      .+.++|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.+++||+||.+++.+..    +..
T Consensus        29 ~~~~~I~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           29 PYARKITFLGTGSM-GLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA  107 (320)
T ss_dssp             CCCSEEEEECCTTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred             cCCCEEEEECccHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence            35679999999886 9999999999999999998763              3667888999999999986532    221


Q ss_pred             ----CCcCCCcEEEEeecCC
Q 017679          292 ----SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       292 ----e~ik~gavVIDvg~n~  307 (368)
                          +.+++|.+|||++...
T Consensus       108 ~~~~~~l~~~~~vi~~st~~  127 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDMASIT  127 (320)
T ss_dssp             TCHHHHCCTTCEEEECSCCC
T ss_pred             hhHHhhCCCCCEEEecCCCC
Confidence                2468899999998754

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.58  E-value=5.4e-05  Score=71.14  Aligned_cols=73  Identities=15%  Similarity=0.156  Sum_probs=58.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----c-c-C-
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-R-G-  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I-~-~-  291 (368)
                      ++|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.+++||+||.+++.+..    + . . 
T Consensus         2 ~~i~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGLGIM-GSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEeecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            68999999876 9999999999999999998763              3566778899999999986532    2 1 1 


Q ss_pred             --CCcCCCcEEEEeecC
Q 017679          292 --SWLKPGAVVLDVGTC  306 (368)
Q Consensus       292 --e~ik~gavVIDvg~n  306 (368)
                        +.+++|.+|||++..
T Consensus        81 l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           81 VLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             HHHHCCTTCEEEECSCC
T ss_pred             HhhcCCCCCEEEeCCCC
Confidence              246889999999764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.57  E-value=0.0001  Score=68.41  Aligned_cols=111  Identities=14%  Similarity=0.286  Sum_probs=70.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-C-----------------HhhhccCCCEEEEecCCCCc-
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-N-----------------PEQITSEADIVIAAAGVANL-  288 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~-----------------L~~~~~~ADIVIsAvG~p~~-  288 (368)
                      ++++||+|+|||.|.+ |...+..|++.||.|+++..... +                 ..+.+..+|+||+||+.+.. 
T Consensus        27 l~L~gk~VLVVGgG~v-a~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N  105 (223)
T 3dfz_A           27 LDLKGRSVLVVGGGTI-ATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAVN  105 (223)
T ss_dssp             ECCTTCCEEEECCSHH-HHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHHH
T ss_pred             EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHHH
Confidence            4799999999998875 99999999999999999875431 1                 12457889999999998764 


Q ss_pred             --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhc---cceEeccCCCcccHHHHHHHHHHH
Q 017679          289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMR---LASVITPVPGGVGPMTVAMLLSNT  357 (368)
Q Consensus       289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~---~a~~iTPVPGGVGp~T~amLl~N~  357 (368)
                        |... -+.|. .|.+.-+|..              +|+-|.+..+   ..-+|+  -||-+|..+..|-+.+
T Consensus       106 ~~I~~~-ak~gi-~VNvvD~p~~--------------~~f~~Paiv~rg~l~iaIS--T~G~sP~la~~iR~~i  161 (223)
T 3dfz_A          106 KFVKQH-IKNDQ-LVNMASSFSD--------------GNIQIPAQFSRGRLSLAIS--TDGASPLLTKRIKEDL  161 (223)
T ss_dssp             HHHHHH-SCTTC-EEEC-----C--------------CSEECCEEEEETTEEEEEE--CTTSCHHHHHHHHHHH
T ss_pred             HHHHHH-HhCCC-EEEEeCCccc--------------CeEEEeeEEEeCCEEEEEE--CCCCCcHHHHHHHHHH
Confidence              3222 23343 3455444321              2222222211   223343  4899998777765544

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.53  E-value=8.9e-05  Score=73.44  Aligned_cols=90  Identities=18%  Similarity=0.187  Sum_probs=61.3

Q ss_pred             cCCHHHHH----HHHHH-hCC-CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH--------------hhh
Q 017679          213 PCTPKGCI----ELLIR-SGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------------EQI  272 (368)
Q Consensus       213 PcTa~gv~----~lL~~-~~i-~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L--------------~~~  272 (368)
                      +.|+.|+.    +++++ .+. +++||+|+|+|.|++ |..+|..|.+.|++|++++++...+              .+.
T Consensus       148 ~aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~V-G~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~l  226 (364)
T 1leh_A          148 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNV-AKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAI  226 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGT
T ss_pred             cchhhHHHHHHHHHHHhhccccCCCcCEEEEECchHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHH
Confidence            45666654    44555 476 899999999999885 9999999999999999887653222              222


Q ss_pred             c-cCCCEEEEecCCCCcccCCCcCC-Cc-EEEEee
Q 017679          273 T-SEADIVIAAAGVANLVRGSWLKP-GA-VVLDVG  304 (368)
Q Consensus       273 ~-~~ADIVIsAvG~p~~I~~e~ik~-ga-vVIDvg  304 (368)
                      + .++||+|.+. ..+.|+.+.++. ++ +|+..+
T Consensus       227 l~~~~DIvip~a-~~~~I~~~~~~~lg~~iV~e~A  260 (364)
T 1leh_A          227 YGVTCDIFAPCA-LGAVLNDFTIPQLKAKVIAGSA  260 (364)
T ss_dssp             TTCCCSEEEECS-CSCCBSTTHHHHCCCSEECCSC
T ss_pred             hccCCcEeeccc-hHHHhCHHHHHhCCCcEEEeCC
Confidence            2 3889999774 344666554322 33 444444

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.51  E-value=8.2e-05  Score=71.04  Aligned_cols=76  Identities=17%  Similarity=0.203  Sum_probs=61.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----c-c-
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-R-  290 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I-~-  290 (368)
                      +-++|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.+++||+||.+++.+..    + . 
T Consensus        20 ~m~~I~iIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~   98 (310)
T 3doj_A           20 HMMEVGFLGLGIM-GKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK   98 (310)
T ss_dssp             CSCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred             cCCEEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence            4578999999876 9999999999999999998763              3567778899999999987632    2 1 


Q ss_pred             C---CCcCCCcEEEEeecCC
Q 017679          291 G---SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       291 ~---e~ik~gavVIDvg~n~  307 (368)
                      .   +.+++|.+|||++...
T Consensus        99 ~~l~~~l~~g~~vv~~st~~  118 (310)
T 3doj_A           99 GGVLEQICEGKGYIDMSTVD  118 (310)
T ss_dssp             TCGGGGCCTTCEEEECSCCC
T ss_pred             hhhhhccCCCCEEEECCCCC
Confidence            1   3568899999998643

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.50  E-value=0.00012  Score=69.44  Aligned_cols=73  Identities=21%  Similarity=0.257  Sum_probs=59.1

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCccc------CC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANLVR------GS  292 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I~------~e  292 (368)
                      ++|.|||.|.+ |.+++..|++.|.+|++++++.              .++++.++ ||+||.+++.+..+.      .+
T Consensus        16 ~~I~vIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIGLGNM-GAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEECCSTT-HHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            68999999875 9999999999999999998764              35667777 999999998653221      24


Q ss_pred             CcCCCcEEEEeecCC
Q 017679          293 WLKPGAVVLDVGTCP  307 (368)
Q Consensus       293 ~ik~gavVIDvg~n~  307 (368)
                      .+++|.+|||.+...
T Consensus        94 ~l~~g~ivv~~st~~  108 (296)
T 3qha_A           94 HAKPGTVIAIHSTIS  108 (296)
T ss_dssp             TCCTTCEEEECSCCC
T ss_pred             hcCCCCEEEEeCCCC
Confidence            678999999998653

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.47  E-value=0.00016  Score=69.43  Aligned_cols=74  Identities=20%  Similarity=0.364  Sum_probs=60.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----c-cC--
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-RG--  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I-~~--  291 (368)
                      |+|-+||-|.. |.|+|..|++.|.+|++++++.              .++.+.++++|+||+.++.+.-    + ..  
T Consensus         4 ~kIgfIGlG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g   82 (300)
T 3obb_A            4 KQIAFIGLGHM-GAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   82 (300)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSS
T ss_pred             CEEEEeeehHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhh
Confidence            68999999986 9999999999999999999873              4677889999999999986542    2 22  


Q ss_pred             --CCcCCCcEEEEeecCC
Q 017679          292 --SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       292 --e~ik~gavVIDvg~n~  307 (368)
                        +.+++|.++||.++..
T Consensus        83 ~~~~~~~g~iiId~sT~~  100 (300)
T 3obb_A           83 LLAHIAPGTLVLECSTIA  100 (300)
T ss_dssp             STTSCCC-CEEEECSCCC
T ss_pred             hhhcCCCCCEEEECCCCC
Confidence              3467899999999764

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.45  E-value=9.4e-05  Score=70.21  Aligned_cols=75  Identities=13%  Similarity=0.156  Sum_probs=59.7

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCc----c---
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVANL----V---  289 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~----I---  289 (368)
                      .++|.|||.|.+ |.+++..|.+.|.+|++++++.               .++.+.+++||+||.+++.+..    +   
T Consensus         7 ~~~I~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~   85 (303)
T 3g0o_A            7 DFHVGIVGLGSM-GMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE   85 (303)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred             CCeEEEECCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence            468999999876 9999999999999999998752               3556778899999999987532    2   


Q ss_pred             c--CCCcCCCcEEEEeecCC
Q 017679          290 R--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       290 ~--~e~ik~gavVIDvg~n~  307 (368)
                      .  .+.+++|.+|||++...
T Consensus        86 ~~l~~~l~~g~ivv~~st~~  105 (303)
T 3g0o_A           86 DGVAHLMKPGSAVMVSSTIS  105 (303)
T ss_dssp             CCCGGGSCTTCEEEECSCCC
T ss_pred             hhHHhhCCCCCEEEecCCCC
Confidence            1  13568899999998653

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.43  E-value=7.4e-05  Score=70.18  Aligned_cols=74  Identities=19%  Similarity=0.212  Sum_probs=59.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cc---c-
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV---R-  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I---~-  290 (368)
                      ++|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.+++||+||.+++.+.    .+   . 
T Consensus         2 ~~I~iiG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~   80 (287)
T 3pdu_A            2 TTYGFLGLGIM-GGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANG   80 (287)
T ss_dssp             CCEEEECCSTT-HHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CeEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchh
Confidence            47999999886 9999999999999999998763              356777889999999998763    12   1 


Q ss_pred             -CCCcCCCcEEEEeecCC
Q 017679          291 -GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       291 -~e~ik~gavVIDvg~n~  307 (368)
                       .+.+++|.+|||++...
T Consensus        81 l~~~l~~g~~vv~~st~~   98 (287)
T 3pdu_A           81 VLEGIGGGRGYIDMSTVD   98 (287)
T ss_dssp             GGGTCCTTCEEEECSCCC
T ss_pred             hhhcccCCCEEEECCCCC
Confidence             13567899999998753

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.41  E-value=9.9e-05  Score=70.41  Aligned_cols=78  Identities=15%  Similarity=0.104  Sum_probs=62.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----ccc
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR  290 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I~  290 (368)
                      +...++|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.+++||+||.+++.+.    .+.
T Consensus         6 ~~~~~~IgiIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~   84 (306)
T 3l6d_A            6 ESFEFDVSVIGLGAM-GTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG   84 (306)
T ss_dssp             CCCSCSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred             ccCCCeEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence            456789999999886 9999999999999999998762              467788899999999998654    132


Q ss_pred             CC---CcCCCcEEEEeecCC
Q 017679          291 GS---WLKPGAVVLDVGTCP  307 (368)
Q Consensus       291 ~e---~ik~gavVIDvg~n~  307 (368)
                      .+   .+++|.+|||++...
T Consensus        85 ~~~l~~~~~g~ivid~st~~  104 (306)
T 3l6d_A           85 MPGVARALAHRTIVDYTTNA  104 (306)
T ss_dssp             STTHHHHTTTCEEEECCCCC
T ss_pred             ccchhhccCCCEEEECCCCC
Confidence            11   246899999998654

>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}

Probab=97.39  E-value=0.00075  Score=68.78  Aligned_cols=187  Identities=17%  Similarity=0.207  Sum_probs=131.6

Q ss_pred             CCCEEEEEEeCCC--------c-ccHHHHHHHHHHHHHc-CCeEEEEEcCCCC-----CHHHHHHHHHHhhhccCccEEE
Q 017679          103 KVPGLAVILVGER--------R-DSQTYVRNKIKACEEV-GIKSIVTEFADGC-----TEDEVLNALSNYNQDSSINGIL  167 (368)
Q Consensus       103 ~~P~LaiI~vG~d--------~-aS~~Yv~~k~k~a~~~-GI~~~~~~l~~~~-----~~~el~~~I~~LN~D~~V~GIl  167 (368)
                      +-..++||-=|+.        + ++.--...|.-.+..+ ||++.-++|....     +.+|+.+.++.+-  |.+-||+
T Consensus        89 kgn~VaVVTDG~aILGLGDiG~~agmpImeGKl~Lyk~~aGId~lPI~LD~gt~~~~~d~defve~v~~~~--P~fG~In  166 (487)
T 3nv9_A           89 RGNFVGVVSDSTRVLGDGDVTPPGGLGVMEGKALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQ--HTFGAIN  166 (487)
T ss_dssp             GGGEEEEEECSSSBGGGBCCCGGGGHHHHHHHHHHHHHHHCCEEEEEECCCBCTTSCBCHHHHHHHHHHHG--GGCSEEE
T ss_pred             cCCEEEEEEcCceeeeccccccccCCchhhhHHHHHHhcCCCceeeeEEeCCCccccCCHHHHHHHHHHhC--CCCCeec
Confidence            3456666654543        2 3455556787777775 7998888885531     3789999999886  6677866


Q ss_pred             EeCCCCCCCCH---HHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccc
Q 017679          168 VQLPLPQHLDE---GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIV  244 (368)
Q Consensus       168 VqlPLp~~id~---~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~V  244 (368)
                      .     +.+..   -++++....+-|+-.||.-          ..|---++..|++..|+-.+.+++..++|+.|+|.+ 
T Consensus       167 l-----EDf~ap~af~il~ryr~~~~ipvFnDD----------~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaA-  230 (487)
T 3nv9_A          167 L-----EDISQPNCYKILDVLRESCDIPVWHDD----------QQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSS-  230 (487)
T ss_dssp             E-----CSCCTTHHHHHHHHHHHHCSSCEEETT----------THHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHH-
T ss_pred             H-----hhcCCchHHHHHHHHHhhccCCccccc----------cchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-
Confidence            5     33433   3344443322244444422          223233456788999999999999999999999987 


Q ss_pred             hHHHHHHHhhCCC---EEEEEeCC------------------------------CCCHhhhccCCCEEEEecCC-CCccc
Q 017679          245 GLPTSLLLQRHHA---TVSIVHAL------------------------------TKNPEQITSEADIVIAAAGV-ANLVR  290 (368)
Q Consensus       245 Grpla~lL~~~gA---tVti~h~~------------------------------t~~L~~~~~~ADIVIsAvG~-p~~I~  290 (368)
                      |..++.+|...|.   .+++|.++                              ..+|.+.++.+|++|-..+. |+.++
T Consensus       231 Gigia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft  310 (487)
T 3nv9_A          231 NTTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVK  310 (487)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCC
T ss_pred             HHHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCC
Confidence            9999999999998   69999764                              12467888999999966633 89999


Q ss_pred             CCCcC---CCcEEEEeecCCC
Q 017679          291 GSWLK---PGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~e~ik---~gavVIDvg~n~~  308 (368)
                      +||++   +..+|+-++ ||.
T Consensus       311 ~e~V~~Ma~~PIIFaLS-NPt  330 (487)
T 3nv9_A          311 AEWIKSMGEKPIVFCCA-NPV  330 (487)
T ss_dssp             HHHHHTSCSSCEEEECC-SSS
T ss_pred             HHHHHhhcCCCEEEECC-CCC
Confidence            99885   478898887 554

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.37  E-value=0.00025  Score=69.75  Aligned_cols=77  Identities=14%  Similarity=0.188  Sum_probs=60.9

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCC---CEEEEecCCCCc---c
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEA---DIVIAAAGVANL---V  289 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~A---DIVIsAvG~p~~---I  289 (368)
                      +++++|.|||.|.+ |.+++..|++.|.+|++++++.              .++.+.++++   |+||.+++.+..   +
T Consensus        20 m~~mkIgiIGlG~m-G~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl   98 (358)
T 4e21_A           20 FQSMQIGMIGLGRM-GADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML   98 (358)
T ss_dssp             --CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred             hcCCEEEEECchHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence            46789999999875 9999999999999999998762              3677777788   999999986631   1


Q ss_pred             c--CCCcCCCcEEEEeecCC
Q 017679          290 R--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       290 ~--~e~ik~gavVIDvg~n~  307 (368)
                      .  ...+++|.+|||++...
T Consensus        99 ~~l~~~l~~g~iiId~st~~  118 (358)
T 4e21_A           99 QRMTPLLAANDIVIDGGNSH  118 (358)
T ss_dssp             HHHGGGCCTTCEEEECSSCC
T ss_pred             HHHHhhCCCCCEEEeCCCCC
Confidence            1  24578899999998654

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.36  E-value=0.00017  Score=69.00  Aligned_cols=74  Identities=16%  Similarity=0.197  Sum_probs=57.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCcc----cC---
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANLV----RG---  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I----~~---  291 (368)
                      +||-+||-|.. |.|+|..|++.|.+|++++++.              .++.+.++++|+||+.++.+..+    ..   
T Consensus         6 ~kIgfIGLG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~   84 (297)
T 4gbj_A            6 EKIAFLGLGNL-GTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELV   84 (297)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHH
T ss_pred             CcEEEEecHHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHH
Confidence            68999999986 9999999999999999998764              35678899999999999865432    11   


Q ss_pred             CCcCCCcEEEEeecCC
Q 017679          292 SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       292 e~ik~gavVIDvg~n~  307 (368)
                      ..+++|.++||.++..
T Consensus        85 ~~~~~~~iiid~sT~~  100 (297)
T 4gbj_A           85 EKLGKDGVHVSMSTIS  100 (297)
T ss_dssp             HHHCTTCEEEECSCCC
T ss_pred             hhcCCCeEEEECCCCC
Confidence            2357889999998753

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.35  E-value=0.00019  Score=69.04  Aligned_cols=73  Identities=16%  Similarity=0.096  Sum_probs=59.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC-------------------C-CHhhhccCCCEEEEecCCCCccc-
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT-------------------K-NPEQITSEADIVIAAAGVANLVR-  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t-------------------~-~L~~~~~~ADIVIsAvG~p~~I~-  290 (368)
                      ++|.|||.|.+ |.+++..|++.| .+|++++++.                   . ++.+.+++||+||.+++.+.... 
T Consensus        25 m~IgvIG~G~m-G~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~~~~aDvVi~avp~~~~~~~  103 (317)
T 4ezb_A           25 TTIAFIGFGEA-AQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGIACADVVLSLVVGAATKAV  103 (317)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGGGGGCSEEEECCCGGGHHHH
T ss_pred             CeEEEECccHH-HHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHHHhcCCEEEEecCCHHHHHH
Confidence            68999999876 999999999999 9999998764                   2 56677889999999998664321 


Q ss_pred             ----CCCcCCCcEEEEeecC
Q 017679          291 ----GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 ----~e~ik~gavVIDvg~n  306 (368)
                          .+.+++|.+|||++..
T Consensus       104 ~~~i~~~l~~~~ivv~~st~  123 (317)
T 4ezb_A          104 AASAAPHLSDEAVFIDLNSV  123 (317)
T ss_dssp             HHHHGGGCCTTCEEEECCSC
T ss_pred             HHHHHhhcCCCCEEEECCCC
Confidence                2457889999999854

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.34  E-value=0.0001  Score=58.57  Aligned_cols=73  Identities=22%  Similarity=0.210  Sum_probs=51.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC---------------------CHhhhccCCCEEEEecCCCCc
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK---------------------NPEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~p~~  288 (368)
                      .+++|+|+|.|. +|+.++..|.+.| .+|+++.++..                     ++.+.++++|+||.++|....
T Consensus         4 ~~~~v~I~G~G~-iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~   82 (118)
T 3ic5_A            4 MRWNICVVGAGK-IGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT   82 (118)
T ss_dssp             TCEEEEEECCSH-HHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred             CcCeEEEECCCH-HHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence            568999999955 5999999999999 79999987531                     234556788999988863211


Q ss_pred             --ccCCCcCCCcEEEEee
Q 017679          289 --VRGSWLKPGAVVLDVG  304 (368)
Q Consensus       289 --I~~e~ik~gavVIDvg  304 (368)
                        +-....+.|.-.+|++
T Consensus        83 ~~~~~~~~~~g~~~~~~~  100 (118)
T 3ic5_A           83 PIIAKAAKAAGAHYFDLT  100 (118)
T ss_dssp             HHHHHHHHHTTCEEECCC
T ss_pred             HHHHHHHHHhCCCEEEec
Confidence              2222345566666655

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=97.33  E-value=0.00013  Score=70.79  Aligned_cols=74  Identities=22%  Similarity=0.228  Sum_probs=58.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------CHhhhccCCCEEEEecCCCC---ccc--
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NPEQITSEADIVIAAAGVAN---LVR--  290 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------~L~~~~~~ADIVIsAvG~p~---~I~--  290 (368)
                      +++++|.|||.|.+ |..++..|.+.|.+|+++.++..              ++.+.+++||+||.+++...   ++.  
T Consensus        14 l~~~~I~IIG~G~m-G~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~   92 (338)
T 1np3_A           14 IQGKKVAIIGYGSQ-GHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEE   92 (338)
T ss_dssp             HHTSCEEEECCSHH-HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred             hcCCEEEEECchHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHH
Confidence            46789999999876 99999999999999998887642              34567889999999997432   233  


Q ss_pred             -CCCcCCCcEEEEee
Q 017679          291 -GSWLKPGAVVLDVG  304 (368)
Q Consensus       291 -~e~ik~gavVIDvg  304 (368)
                       ...+++|++|+|++
T Consensus        93 i~~~l~~~~ivi~~~  107 (338)
T 1np3_A           93 IEPNLKKGATLAFAH  107 (338)
T ss_dssp             TGGGCCTTCEEEESC
T ss_pred             HHhhCCCCCEEEEcC
Confidence             24578899999885

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.31  E-value=0.00026  Score=67.71  Aligned_cols=74  Identities=18%  Similarity=0.274  Sum_probs=59.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCcc---c-
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT----------------KNPEQITSEADIVIAAAGVANLV---R-  290 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~I---~-  290 (368)
                      .++|.|||.|.+ |.+++..|.+.|. +|++++++.                .++.+.+++||+||.+++.+..+   . 
T Consensus        24 ~~~I~iIG~G~m-G~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~  102 (312)
T 3qsg_A           24 AMKLGFIGFGEA-ASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQ  102 (312)
T ss_dssp             -CEEEEECCSHH-HHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHH
T ss_pred             CCEEEEECccHH-HHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHh
Confidence            478999999876 9999999999999 999999851                35677889999999999876532   1 


Q ss_pred             -CCCcCCCcEEEEeecC
Q 017679          291 -GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 -~e~ik~gavVIDvg~n  306 (368)
                       .+.+++|.+|||++..
T Consensus       103 l~~~l~~~~ivvd~st~  119 (312)
T 3qsg_A          103 AGPHLCEGALYADFTSC  119 (312)
T ss_dssp             HGGGCCTTCEEEECCCC
T ss_pred             hHhhcCCCCEEEEcCCC
Confidence             2457789999998754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.27  E-value=0.0003  Score=66.81  Aligned_cols=74  Identities=19%  Similarity=0.266  Sum_probs=59.2

Q ss_pred             cceEEEEc-cCccchHHHHHHHhhCCCEEEEEeCCCC-CHhhhccCCCEEEEecCCCCc---cc--CCCcCCCcEEEEee
Q 017679          232 GKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQITSEADIVIAAAGVANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       232 GK~VvVIG-~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~~~~~~ADIVIsAvG~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      .++|.||| .|.+ |..++..|.+.|.+|+++.+... +..+.+++||+||.+++....   +.  ...++++++|+|++
T Consensus        21 ~~~I~iIGg~G~m-G~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~~~~   99 (298)
T 2pv7_A           21 IHKIVIVGGYGKL-GGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLT   99 (298)
T ss_dssp             CCCEEEETTTSHH-HHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CCEEEEEcCCCHH-HHHHHHHHHhCCCeEEEEECCcccCHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence            57899999 8875 99999999999999999987643 567788999999999975432   21  23578899999987


Q ss_pred             cC
Q 017679          305 TC  306 (368)
Q Consensus       305 ~n  306 (368)
                      ..
T Consensus       100 sv  101 (298)
T 2pv7_A          100 SV  101 (298)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.27  E-value=0.00024  Score=68.40  Aligned_cols=75  Identities=17%  Similarity=0.176  Sum_probs=59.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC----------------CCHhh-hccCCCEEEEecCCCCc---
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------KNPEQ-ITSEADIVIAAAGVANL---  288 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t----------------~~L~~-~~~~ADIVIsAvG~p~~---  288 (368)
                      ..++|.|||.|.+ |..++..|.+.|.  +|++++++.                .++.+ .+++||+||.+++....   
T Consensus        32 ~~~kI~IIG~G~m-G~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v  110 (314)
T 3ggo_A           32 SMQNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREI  110 (314)
T ss_dssp             SCSEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHH
T ss_pred             CCCEEEEEeeCHH-HHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHH
Confidence            4479999998876 9999999999998  999998752                34566 78999999999975432   


Q ss_pred             cc--CCCcCCCcEEEEeecC
Q 017679          289 VR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 I~--~e~ik~gavVIDvg~n  306 (368)
                      +.  ...++++++|+|++..
T Consensus       111 l~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          111 AKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHhhccCCCcEEEECCCC
Confidence            21  1347899999999854

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=97.20  E-value=0.00025  Score=65.89  Aligned_cols=71  Identities=17%  Similarity=0.297  Sum_probs=55.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC-------------HhhhccCCCEEEEecCCCC-c---cc--CCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-------------PEQITSEADIVIAAAGVAN-L---VR--GSW  293 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~-------------L~~~~~~ADIVIsAvG~p~-~---I~--~e~  293 (368)
                      ++|.|||.|.+ |..++..|.+ |.+|++++++...             +.+.+.++|+||.+++.+. .   +.  .+.
T Consensus         2 ~~i~iiG~G~~-G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~   79 (289)
T 2cvz_A            2 EKVAFIGLGAM-GYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPY   79 (289)
T ss_dssp             CCEEEECCSTT-HHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTT
T ss_pred             CeEEEEcccHH-HHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhh
Confidence            47999999886 9999999999 9999999876421             3455788999999998764 2   21  256


Q ss_pred             cCCCcEEEEeec
Q 017679          294 LKPGAVVLDVGT  305 (368)
Q Consensus       294 ik~gavVIDvg~  305 (368)
                      +++|.+|||++.
T Consensus        80 l~~~~~vv~~s~   91 (289)
T 2cvz_A           80 LREGTYWVDATS   91 (289)
T ss_dssp             CCTTEEEEECSC
T ss_pred             CCCCCEEEECCC
Confidence            788999999864

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.18  E-value=0.00013  Score=74.46  Aligned_cols=78  Identities=18%  Similarity=0.217  Sum_probs=56.5

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCC----------------------CHhhhccCCCEEEEec
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK----------------------NPEQITSEADIVIAAA  283 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~----------------------~L~~~~~~ADIVIsAv  283 (368)
                      +.++++|+|+|+|+|++ |++++..|++. +++|++++|+..                      ++.+.++++|+||+++
T Consensus        18 ~~~l~~k~VlIiGAGgi-G~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t   96 (467)
T 2axq_A           18 EGRHMGKNVLLLGSGFV-AQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI   96 (467)
T ss_dssp             -----CEEEEEECCSTT-HHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred             ccCCCCCEEEEECChHH-HHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence            46788999999999775 99999999988 679999987521                      2334567899999999


Q ss_pred             CCCCc--ccCCCcCCCcEEEEeec
Q 017679          284 GVANL--VRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       284 G~p~~--I~~e~ik~gavVIDvg~  305 (368)
                      |....  +....++.|..++|+.+
T Consensus        97 p~~~~~~v~~a~l~~g~~vvd~~~  120 (467)
T 2axq_A           97 PYTFHPNVVKSAIRTKTDVVTSSY  120 (467)
T ss_dssp             CGGGHHHHHHHHHHHTCEEEECSC
T ss_pred             chhhhHHHHHHHHhcCCEEEEeec
Confidence            85321  33445677889999876

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=97.16  E-value=0.00036  Score=65.23  Aligned_cols=70  Identities=23%  Similarity=0.357  Sum_probs=55.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----ccC----
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VRG----  291 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I~~----  291 (368)
                      +|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.++++|+||.+++.|..    +..    
T Consensus         2 ~i~iiG~G~m-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~   80 (296)
T 2gf2_A            2 PVGFIGLGNM-GNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI   80 (296)
T ss_dssp             CEEEECCSTT-HHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred             eEEEEeccHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence            6899999886 9999999999999999998753              3566778899999999976632    221    


Q ss_pred             -CCcCCCcEEEEee
Q 017679          292 -SWLKPGAVVLDVG  304 (368)
Q Consensus       292 -e~ik~gavVIDvg  304 (368)
                       +.+++|.+|||.+
T Consensus        81 ~~~l~~~~~vv~~s   94 (296)
T 2gf2_A           81 LKKVKKGSLLIDSS   94 (296)
T ss_dssp             GGTCCTTCEEEECS
T ss_pred             HhcCCCCCEEEECC
Confidence             2568899999964

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.14  E-value=0.0007  Score=60.77  Aligned_cols=58  Identities=17%  Similarity=0.132  Sum_probs=43.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH--------------------hhhccCCCEEEEecCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------------------EQITSEADIVIAAAGV  285 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L--------------------~~~~~~ADIVIsAvG~  285 (368)
                      ..++||+|+|.|+++-+|+.++..|+++|++|+++.|+...+                    .+.+...|+||..+|.
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS   94 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence            357899999999988899999999999999999998864322                    3445566777766663

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.12  E-value=0.00035  Score=66.28  Aligned_cols=72  Identities=24%  Similarity=0.345  Sum_probs=57.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----ccC---
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VRG---  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I~~---  291 (368)
                      ++|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.++++|+||.+++.|..    +..   
T Consensus        31 ~~I~iIG~G~m-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~  109 (316)
T 2uyy_A           31 KKIGFLGLGLM-GSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSG  109 (316)
T ss_dssp             SCEEEECCSHH-HHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CeEEEEcccHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchh
Confidence            67999999875 9999999999999999998753              2455667889999999985432    222   


Q ss_pred             --CCcCCCcEEEEeec
Q 017679          292 --SWLKPGAVVLDVGT  305 (368)
Q Consensus       292 --e~ik~gavVIDvg~  305 (368)
                        +.+++|.+|||++.
T Consensus       110 ~~~~l~~~~~vv~~s~  125 (316)
T 2uyy_A          110 VLQGIRPGKCYVDMST  125 (316)
T ss_dssp             GGGGCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEECCC
Confidence              46788999999864

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.07  E-value=0.00051  Score=64.33  Aligned_cols=73  Identities=23%  Similarity=0.406  Sum_probs=57.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----ccC---
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VRG---  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I~~---  291 (368)
                      ++|.|||.|.+ |..++..|.+.|.+|++++++.              .++.+.+.++|+||.+++.+..    +..   
T Consensus         5 ~~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~   83 (301)
T 3cky_A            5 IKIGFIGLGAM-GKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGG   83 (301)
T ss_dssp             CEEEEECCCTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcch
Confidence            58999999876 9999999999999999997752              3566777889999999987542    321   


Q ss_pred             --CCcCCCcEEEEeecC
Q 017679          292 --SWLKPGAVVLDVGTC  306 (368)
Q Consensus       292 --e~ik~gavVIDvg~n  306 (368)
                        +.+++|.+|||++..
T Consensus        84 l~~~l~~~~~vv~~~~~  100 (301)
T 3cky_A           84 VLSACKAGTVIVDMSSV  100 (301)
T ss_dssp             HHHHSCTTCEEEECCCC
T ss_pred             HhhcCCCCCEEEECCCC
Confidence              246789999998743

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.06  E-value=0.00052  Score=64.23  Aligned_cols=73  Identities=19%  Similarity=0.287  Sum_probs=57.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----ccc--C-
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR--G-  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I~--~-  291 (368)
                      .+|.|||.|.+ |..++..|.+.|.+|++++++.              .++.+.++++|+||.+++.+.    .+.  . 
T Consensus         6 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~   84 (299)
T 1vpd_A            6 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG   84 (299)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             ceEEEECchHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcch
Confidence            37999998875 9999999999999999997752              356677889999999998653    231  1 


Q ss_pred             --CCcCCCcEEEEeecC
Q 017679          292 --SWLKPGAVVLDVGTC  306 (368)
Q Consensus       292 --e~ik~gavVIDvg~n  306 (368)
                        +++++|.+|||++..
T Consensus        85 l~~~l~~~~~vv~~s~~  101 (299)
T 1vpd_A           85 IIEGAKPGTVLIDMSSI  101 (299)
T ss_dssp             HHHHCCTTCEEEECSCC
T ss_pred             HhhcCCCCCEEEECCCC
Confidence              346889999998643

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.04  E-value=0.00081  Score=60.60  Aligned_cols=74  Identities=22%  Similarity=0.338  Sum_probs=52.9

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCC---ccc--CCCcCCCcEE
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVAN---LVR--GSWLKPGAVV  300 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~---~I~--~e~ik~gavV  300 (368)
                      .+.++.++++.|||.|.+ |.+++..|.+.|.+|++++++..    .+++||+||.+++.+.   .+.  ...++ +++|
T Consensus        13 ~~~~~~~~~I~iiG~G~m-G~~la~~l~~~g~~V~~~~~~~~----~~~~aD~vi~av~~~~~~~v~~~l~~~~~-~~~v   86 (209)
T 2raf_A           13 ENLYFQGMEITIFGKGNM-GQAIGHNFEIAGHEVTYYGSKDQ----ATTLGEIVIMAVPYPALAALAKQYATQLK-GKIV   86 (209)
T ss_dssp             -------CEEEEECCSHH-HHHHHHHHHHTTCEEEEECTTCC----CSSCCSEEEECSCHHHHHHHHHHTHHHHT-TSEE
T ss_pred             cccccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHH----HhccCCEEEEcCCcHHHHHHHHHHHHhcC-CCEE
Confidence            456788999999998875 99999999999999999987643    6789999999998322   121  12356 8999


Q ss_pred             EEeec
Q 017679          301 LDVGT  305 (368)
Q Consensus       301 IDvg~  305 (368)
                      ||+..
T Consensus        87 i~~~~   91 (209)
T 2raf_A           87 VDITN   91 (209)
T ss_dssp             EECCC
T ss_pred             EEECC
Confidence            99864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.03  E-value=0.00027  Score=68.88  Aligned_cols=111  Identities=21%  Similarity=0.236  Sum_probs=71.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCC-Cc-
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQITSEADIVIAAAGVA-NL-  288 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p-~~-  288 (368)
                      +.+||+|+|+|. ||++++..|.+ +..|+++.+..                    ..|.+.++++|+||+++|-. +. 
T Consensus        15 ~~mkilvlGaG~-vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~   92 (365)
T 3abi_A           15 RHMKVLILGAGN-IGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFK   92 (365)
T ss_dssp             -CCEEEEECCSH-HHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHH
T ss_pred             CccEEEEECCCH-HHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccch
Confidence            344799999966 59999999875 56888886542                    23667889999999999742 11 


Q ss_pred             ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCC-cccHHHHHHHHHHHHH
Q 017679          289 VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMTVAMLLSNTLD  359 (368)
Q Consensus       289 I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPG-GVGp~T~amLl~N~v~  359 (368)
                      +-...++.|.-++|+.+.+.+     .        -..+ +.+ +.++. +-+|+ |+-|=-..|+...+++
T Consensus        93 v~~~~~~~g~~yvD~s~~~~~-----~--------~~l~-~~a-~~~g~-~~i~~~G~~PG~~~~~a~~~~~  148 (365)
T 3abi_A           93 SIKAAIKSKVDMVDVSFMPEN-----P--------LELR-DEA-EKAQV-TIVFDAGFAPGLSNILMGRIFQ  148 (365)
T ss_dssp             HHHHHHHHTCEEEECCCCSSC-----G--------GGGH-HHH-HHTTC-EEECCCBTTTBHHHHHHHHHHH
T ss_pred             HHHHHHhcCcceEeeeccchh-----h--------hhhh-hhh-ccCCc-eeeecCCCCCchHHHHHHHHHH
Confidence            444567779999999865422     1        1112 333 33442 23443 5666666677665554

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.99  E-value=0.00056  Score=63.60  Aligned_cols=73  Identities=18%  Similarity=0.244  Sum_probs=56.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC----------------CCHhhhcc-CCCEEEEecCCCCc---cc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------KNPEQITS-EADIVIAAAGVANL---VR  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t----------------~~L~~~~~-~ADIVIsAvG~p~~---I~  290 (368)
                      ++|.|||.|.+ |..++..|.+.|.  +|++++++.                .++.+.++ ++|+||.+++....   +.
T Consensus         2 ~~I~iIG~G~m-G~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~   80 (281)
T 2g5c_A            2 QNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK   80 (281)
T ss_dssp             CEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH
T ss_pred             cEEEEEecCHH-HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHHH
Confidence            57999998876 9999999999997  899987642                25667788 99999999975332   21


Q ss_pred             --CCCcCCCcEEEEeecC
Q 017679          291 --GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 --~e~ik~gavVIDvg~n  306 (368)
                        ...++++.+|+|++..
T Consensus        81 ~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           81 KLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             HHHHHSCTTCEEEECCSC
T ss_pred             HHHhhCCCCcEEEECCCC
Confidence              1356889999998743

>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...

Probab=96.98  E-value=0.053  Score=52.50  Aligned_cols=188  Identities=10%  Similarity=0.053  Sum_probs=119.9

Q ss_pred             eeecHHHHHHHHHHHHHHHHHHHHcCC---CCC-EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC---C-CH
Q 017679           76 VIDGKSIAEEIRSGIDKEVRRMKKSIG---KVP-GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG---C-TE  147 (368)
Q Consensus        76 ildGk~ia~~i~~~i~~~v~~l~~~~g---~~P-~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---~-~~  147 (368)
                      +|+-..+.++=.+.|-+...++|++..   .+- .++.+..-   .|..---.=..++.++|.++.++.-...   . .-
T Consensus         9 ~ls~~dls~~ei~~ll~~A~~lk~~~~~~~L~gk~la~lF~e---~STRTR~SFe~A~~~LGg~~i~l~~~~~~S~~~kg   85 (310)
T 3csu_A            9 IISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFE---ASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKG   85 (310)
T ss_dssp             BCCGGGCCHHHHHHHHHHHHHHHHSCCTTTTTTCEEEEEESS---CCHHHHHHHHHHHHTTTCEEEEESCC-----CCSH
T ss_pred             ccchhhCCHHHHHHHHHHHHHHHhcccccccCCCEEEEEecC---CCccHHHHHHHHHHHhCCeEEEeCCCccchhhccC
Confidence            444444443333455555555654311   122 34444442   3444434567889999999877743332   1 24


Q ss_pred             HHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHh
Q 017679          148 DEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRS  226 (368)
Q Consensus       148 ~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~  226 (368)
                      |-+.+.++-|+.-  +|+|.+--|-  |-....+.++.      .++-.+|.|-   |   +.+.||=+.+ ++.+.++.
T Consensus        86 Esl~DTarvls~~--~D~iviR~~~--~~~~~~la~~~------~~vPVINag~---G---~~~HPtQaLaDl~Ti~e~~  149 (310)
T 3csu_A           86 ETLADTISVISTY--VDAIVMRHPQ--EGAARLATEFS------GNVPVLNAGD---G---SNQHPTQTLLDLFTIQETQ  149 (310)
T ss_dssp             HHHHHHHHHHTTT--CSEEEEEESS--TTHHHHHHHHC------TTCCEEEEEE---T---TSCCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHh--CCEEEEECCC--hhHHHHHHHhc------CCCCEEcCcc---C---CCCCchHHHHHHHHHHHHh
Confidence            6788888888874  7999998763  33333333332      1244567542   1   4567998888 44444444


Q ss_pred             CCCCccceEEEEccC--ccchHHHHHHHhhC-CCEEEEEeCC---------------------CCCHhhhccCCCEEEEe
Q 017679          227 GVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL---------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g--~~VGrpla~lL~~~-gAtVti~h~~---------------------t~~L~~~~~~ADIVIsA  282 (368)
                       ..++|++|+++|-+  +-|.+.++..|... |++|+++.-.                     +.++.+.+++||+|.+-
T Consensus       150 -g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~  228 (310)
T 3csu_A          150 -GRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMT  228 (310)
T ss_dssp             -SCSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEEC
T ss_pred             -CCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEEC
Confidence             58999999999986  45799999999999 9999999632                     24677889999999876


Q ss_pred             c
Q 017679          283 A  283 (368)
Q Consensus       283 v  283 (368)
                      .
T Consensus       229 ~  229 (310)
T 3csu_A          229 R  229 (310)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.97  E-value=0.00057  Score=61.79  Aligned_cols=74  Identities=15%  Similarity=0.170  Sum_probs=54.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhccCCCEEEEecCCCCc---cc-CCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGVANL---VR-GSW  293 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~~ADIVIsAvG~p~~---I~-~e~  293 (368)
                      .++++.|||.|.+ |+.++..|.+.|.+|++++++..             ++.+.++++|+||.+++....   +. ...
T Consensus        27 ~~~~I~iiG~G~~-G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~~~~v~~l~~~  105 (215)
T 2vns_A           27 EAPKVGILGSGDF-ARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQ  105 (215)
T ss_dssp             --CCEEEECCSHH-HHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGGSGGGGGGHHH
T ss_pred             CCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHHHHHHHHHHHh
Confidence            3468999998775 99999999999999999987632             345667899999999984321   21 112


Q ss_pred             cCCCcEEEEeecC
Q 017679          294 LKPGAVVLDVGTC  306 (368)
Q Consensus       294 ik~gavVIDvg~n  306 (368)
                      . ++.+|||++..
T Consensus       106 ~-~~~~vv~~s~g  117 (215)
T 2vns_A          106 L-AGKILVDVSNP  117 (215)
T ss_dssp             H-TTCEEEECCCC
T ss_pred             c-CCCEEEEeCCC
Confidence            2 78999999854

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.95  E-value=0.001  Score=61.99  Aligned_cols=72  Identities=18%  Similarity=0.255  Sum_probs=56.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----ccc----
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR----  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I~----  290 (368)
                      .+|.|||.|.+ |.+++..|.+.|.+|++++ +.              .++.+.++++|+||.+++.+.    .+.    
T Consensus         4 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~   81 (295)
T 1yb4_A            4 MKLGFIGLGIM-GSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHG   81 (295)
T ss_dssp             CEEEECCCSTT-HHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTS
T ss_pred             CEEEEEccCHH-HHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchh
Confidence            47999999886 9999999999999999887 42              245566789999999998764    232    


Q ss_pred             -CCCcCCCcEEEEeecC
Q 017679          291 -GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 -~e~ik~gavVIDvg~n  306 (368)
                       .+.+++|.+|||+...
T Consensus        82 l~~~l~~~~~vv~~s~~   98 (295)
T 1yb4_A           82 CAKTSLQGKTIVDMSSI   98 (295)
T ss_dssp             STTSCCTTEEEEECSCC
T ss_pred             HhhcCCCCCEEEECCCC
Confidence             2357889999998743

>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}

Probab=96.93  E-value=0.023  Score=55.98  Aligned_cols=164  Identities=13%  Similarity=0.154  Sum_probs=107.5

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCC-C-CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceee
Q 017679          123 RNKIKACEEVGIKSIVTEFADG-C-TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG  200 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~-~-~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G  200 (368)
                      -.=..++.++|.++.++..... . .-|-+.+.++-|..-  +|+|.+--|  .|-....+.+..       ++-.+|.|
T Consensus        82 ~SFE~A~~~LGg~~i~l~~~~s~l~kgEsl~DTarvLs~~--~D~IviR~~--~~~~~~~lA~~s-------~vPVINag  150 (353)
T 3sds_A           82 VSTEGAVVKMGGHPMFLGKDDIQLGVNESLYDTSVVISSM--VSCIVARVG--PHSDIANLAKHS-------SVPVINAL  150 (353)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTC--CCSSCHHHHHHHHHTS--CSEEEEECS--SHHHHHHHHHHC-------SSCEEEEE
T ss_pred             HHHHHHHHHcCCeEEecCCccccccCCccHHHHHHHHHHh--cCEEEEEeC--ChHHHHHHHhhC-------CCCEEECC
Confidence            3557789999999976643211 0 124566777777664  789988755  222222222221       23456764


Q ss_pred             eccccCCcCccccCCHHH-HHHHHHHhCCC------------CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC--
Q 017679          201 NLAMRGREPLFIPCTPKG-CIELLIRSGVE------------IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--  265 (368)
Q Consensus       201 ~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~------------l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~--  265 (368)
                             .+.+.||=+.+ ++.+.++.|--            ++|++|++||-++.|.+.++..|...|++|+++.-.  
T Consensus       151 -------~d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~  223 (353)
T 3sds_A          151 -------CDTFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGY  223 (353)
T ss_dssp             -------CSSCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred             -------CCCCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCccc
Confidence                   13467998888 55555555531            499999999999999999999999999999998522  


Q ss_pred             -------------------------CCCHhhhccCCCEEEEec----CCC-----------Cc-ccCCCc-----CCCcE
Q 017679          266 -------------------------TKNPEQITSEADIVIAAA----GVA-----------NL-VRGSWL-----KPGAV  299 (368)
Q Consensus       266 -------------------------t~~L~~~~~~ADIVIsAv----G~p-----------~~-I~~e~i-----k~gav  299 (368)
                                               +.++.+.+++||+|++-+    |..           .+ |+.+.+     +++++
T Consensus       224 ~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai  303 (353)
T 3sds_A          224 EIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWK  303 (353)
T ss_dssp             CCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCE
T ss_pred             CCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcE
Confidence                                     136678899999999753    421           12 566543     57788


Q ss_pred             EEEee
Q 017679          300 VLDVG  304 (368)
Q Consensus       300 VIDvg  304 (368)
                      |.=++
T Consensus       304 ~MHcL  308 (353)
T 3sds_A          304 FMHCL  308 (353)
T ss_dssp             EEECS
T ss_pred             EECCC
Confidence            87776

>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}

Probab=96.93  E-value=0.017  Score=56.32  Aligned_cols=208  Identities=13%  Similarity=0.124  Sum_probs=124.9

Q ss_pred             eeecHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHH
Q 017679           76 VIDGKSIAEEIRSGIDKEVRRMKKSIG---KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGC---TEDE  149 (368)
Q Consensus        76 ildGk~ia~~i~~~i~~~v~~l~~~~g---~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~---~~~e  149 (368)
                      +|+-..+..+=.+.|-+...++|+...   .+-+....++- .| |.----.=..++.++|.++.++.- .+.   .-|-
T Consensus        16 llsi~dls~~ei~~ll~~A~~lk~~~~~~~L~gk~la~lF~-e~-STRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEs   92 (323)
T 3gd5_A           16 LLSLDDLDEAQLHALLTLAHQLKRGERVANLHGKVLGLVFL-KA-STRTRVSFTVAMYQLGGQVIDLSP-SNTQVGRGEP   92 (323)
T ss_dssp             BSSGGGSCHHHHHHHHHHHHHHHHTSSCCCCTTCEEEEEES-SC-CHHHHHHHHHHHHHTTCEEEEC-----------CC
T ss_pred             ccchHhCCHHHHHHHHHHHHHHHhcccccccCCCEEEEEec-CC-CcchHhhHHHHHHHcCCeEEEeCc-ccccCCCCCC
Confidence            455444544333444444555554311   12233333442 23 433333556789999999876532 221   1344


Q ss_pred             HHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCC
Q 017679          150 VLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV  228 (368)
Q Consensus       150 l~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i  228 (368)
                      +.+.++-|+.-  +|+|.+--|-  |-....+.+..       ++-.+|.|-       +.+.||=+.+ ++.+.++.| 
T Consensus        93 l~DTarvLs~~--~D~iviR~~~--~~~~~~lA~~~-------~vPVINag~-------~~~HPtQaLaDl~Ti~e~~g-  153 (323)
T 3gd5_A           93 VRDTARVLGRY--VDGLAIRTFA--QTELEEYAHYA-------GIPVINALT-------DHEHPCQVVADLLTIRENFG-  153 (323)
T ss_dssp             HHHHHHHHTTT--CSEEEEECSS--HHHHHHHHHHH-------CSCEEEEEC-------SSCCHHHHHHHHHHHHHHHS-
T ss_pred             HHHHHHHHHHh--CCEEEEecCC--hhHHHHHHHhC-------CCCEEeCCC-------CCCCcHHHHHHHHHHHHHhC-
Confidence            77778877764  8899998663  12122222221       234567642       3567998888 455555554 


Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEec
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      .++|++|++||-++.|.+.++..+...|++|+++.-.                         +.++.+.+++||+|.+-.
T Consensus       154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~  233 (323)
T 3gd5_A          154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV  233 (323)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence            7999999999999889999999999999999998532                         235678899999998654


Q ss_pred             ----CCC-----------Cc-ccCCCc---CCCcEEEEeec
Q 017679          284 ----GVA-----------NL-VRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       284 ----G~p-----------~~-I~~e~i---k~gavVIDvg~  305 (368)
                          |..           .+ |+.+.+   +++++|.=++-
T Consensus       234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclP  274 (323)
T 3gd5_A          234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLP  274 (323)
T ss_dssp             CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSC
T ss_pred             eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCC
Confidence                311           12 454433   56788777663

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=96.92  E-value=0.0011  Score=67.54  Aligned_cols=78  Identities=15%  Similarity=0.242  Sum_probs=58.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------------CCHhhhccC---CCEEEEecCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQITSE---ADIVIAAAGVA  286 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------------~~L~~~~~~---ADIVIsAvG~p  286 (368)
                      -..+.++|.|||.|.+ |.+++..|++.|.+|++++++.                  .++++.+++   +|+||.+++.+
T Consensus        11 ~~~~~~~IgvIGlG~M-G~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~   89 (480)
T 2zyd_A           11 HHMSKQQIGVVGMAVM-GRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAG   89 (480)
T ss_dssp             ----CBSEEEECCSHH-HHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred             cccCCCeEEEEccHHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCH
Confidence            3467789999999876 9999999999999999998752                  245555555   99999999875


Q ss_pred             Cc----cc--CCCcCCCcEEEEeecC
Q 017679          287 NL----VR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       287 ~~----I~--~e~ik~gavVIDvg~n  306 (368)
                      ..    +.  ...+++|.+|||++..
T Consensus        90 ~~v~~vl~~l~~~l~~g~iIId~s~g  115 (480)
T 2zyd_A           90 AGTDAAIDSLKPYLDKGDIIIDGGNT  115 (480)
T ss_dssp             SHHHHHHHHHGGGCCTTCEEEECSCC
T ss_pred             HHHHHHHHHHHhhcCCCCEEEECCCC
Confidence            32    21  2357889999999854

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.87  E-value=0.00067  Score=62.58  Aligned_cols=75  Identities=16%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC---------------CCHhhhccCCCEEEEecCCCC---ccc
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT---------------KNPEQITSEADIVIAAAGVAN---LVR  290 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~---~I~  290 (368)
                      +.+.+|.|||.|.+ |..++..|.+.|.+ |++++++.               .++.+.++++|+||.+++...   .+.
T Consensus         8 ~~~m~i~iiG~G~m-G~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~   86 (266)
T 3d1l_A            8 IEDTPIVLIGAGNL-ATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQ   86 (266)
T ss_dssp             GGGCCEEEECCSHH-HHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHHH
T ss_pred             CCCCeEEEEcCCHH-HHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHHH
Confidence            45678999999875 99999999999987 88887652               255667789999999997542   221


Q ss_pred             --CCCcCCCcEEEEeec
Q 017679          291 --GSWLKPGAVVLDVGT  305 (368)
Q Consensus       291 --~e~ik~gavVIDvg~  305 (368)
                        ...+++|.+|+|+..
T Consensus        87 ~l~~~~~~~~ivv~~s~  103 (266)
T 3d1l_A           87 GIVEGKREEALMVHTAG  103 (266)
T ss_dssp             HHHTTCCTTCEEEECCT
T ss_pred             HHHhhcCCCcEEEECCC
Confidence              235678999999964

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=95.91  E-value=0.00016  Score=65.26  Aligned_cols=76  Identities=14%  Similarity=0.138  Sum_probs=56.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------CHhhhccCCCEEEEecCCCCc---ccCCCc
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGVANL---VRGSWL  294 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------~L~~~~~~ADIVIsAvG~p~~---I~~e~i  294 (368)
                      +.++++.|||.|.+ |..++..|.+.|.+|++++++..            ++.+.++++|+||.++....+   +.-...
T Consensus        17 ~~~~~I~iIG~G~m-G~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~~~~v~~l~~~   95 (201)
T 2yjz_A           17 EKQGVVCIFGTGDF-GKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFLAELADS   95 (201)
Confidence            56789999999886 99999999999999998876532            334567789999999975332   211123


Q ss_pred             CCCcEEEEeecC
Q 017679          295 KPGAVVLDVGTC  306 (368)
Q Consensus       295 k~gavVIDvg~n  306 (368)
                      ++|.+|||+..-
T Consensus        96 ~~~~ivI~~~~G  107 (201)
T 2yjz_A           96 LKGRVLIDVSNN  107 (201)
Confidence            568899998743

>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*

Probab=96.86  E-value=0.052  Score=52.31  Aligned_cols=149  Identities=14%  Similarity=0.082  Sum_probs=100.2

Q ss_pred             cHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCcc
Q 017679          118 SQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF  194 (368)
Q Consensus       118 S~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl  194 (368)
                      |..---.=..++.++|.++.++.-....+   -|-+.+.++-|+.-  +|+|.+--|-  |-....+.+..       ++
T Consensus        49 STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~la~~~-------~v  117 (299)
T 1pg5_A           49 STRTYLSFQKAIINLGGDVIGFSGEESTSVAKGENLADTIRMLNNY--SDGIVMRHKY--DGASRFASEIS-------DI  117 (299)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEECC-------CCCHHHHHHHHHHH--CSEEEEEESS--BTHHHHHHHHC-------SS
T ss_pred             CcchHHhHHHHHHHhCCEEEEeCCCCcccccCCCCHHHHHHHHHHh--CCEEEEeCCC--hhHHHHHHHhC-------CC
Confidence            44333456788999999988775332111   13456666666654  6899998763  33333433322       23


Q ss_pred             CcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhC-CCEEEEEeCC-----
Q 017679          195 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL-----  265 (368)
Q Consensus       195 ~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~-gAtVti~h~~-----  265 (368)
                      -.+|.|.      .+.+.||=+.+ ++.+.++. ..++|++|+++|-+  +.|.+.++..|... |++|+++.-.     
T Consensus       118 PVINaG~------g~~~HPtQ~LaDl~Ti~e~~-g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~  190 (299)
T 1pg5_A          118 PVINAGD------GKHEHPTQAVIDIYTINKHF-NTIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRAR  190 (299)
T ss_dssp             CEEEEEE------TTTBCHHHHHHHHHHHHHHH-SCSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCC
T ss_pred             CEEeCCC------CCCcCcHHHHHHHHHHHHHh-CCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCC
Confidence            4567542      34567998888 44444444 58999999999986  45799999999999 9999998522     


Q ss_pred             -------------CCCHhhhccCCCEEEEecC
Q 017679          266 -------------TKNPEQITSEADIVIAAAG  284 (368)
Q Consensus       266 -------------t~~L~~~~~~ADIVIsAvG  284 (368)
                                   +.++.+.+++||+|.+-.-
T Consensus       191 ~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~  222 (299)
T 1pg5_A          191 KEILDELNYPVKEVENPFEVINEVDVLYVTRI  222 (299)
T ss_dssp             HHHHTTCCSCEEEESCGGGTGGGCSEEEEECC
T ss_pred             HHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCc
Confidence                         2467788999999997654

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.85  E-value=0.0011  Score=61.46  Aligned_cols=70  Identities=21%  Similarity=0.220  Sum_probs=54.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCC---ccc--CC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR--GS  292 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~---~I~--~e  292 (368)
                      +|.|||.|.+ |..++..|.+.|.+|+++.++.                .++.+. .++|+||.+++...   .+.  ..
T Consensus         2 ~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~~   79 (279)
T 2f1k_A            2 KIGVVGLGLI-GASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLIP   79 (279)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHGG
T ss_pred             EEEEEcCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHHh
Confidence            6899998875 9999999999999999997652                245556 89999999998432   222  24


Q ss_pred             CcCCCcEEEEeec
Q 017679          293 WLKPGAVVLDVGT  305 (368)
Q Consensus       293 ~ik~gavVIDvg~  305 (368)
                      .++++.+|+|++.
T Consensus        80 ~~~~~~~vv~~~~   92 (279)
T 2f1k_A           80 HLSPTAIVTDVAS   92 (279)
T ss_dssp             GSCTTCEEEECCS
T ss_pred             hCCCCCEEEECCC
Confidence            5788999999853

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.84  E-value=0.0013  Score=60.31  Aligned_cols=69  Identities=19%  Similarity=0.303  Sum_probs=53.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC----EEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCc----c
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA----TVSIVHALT---------------KNPEQITSEADIVIAAAGVANL----V  289 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA----tVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~----I  289 (368)
                      +++.|||.|.+ |.+++..|.+.|.    +|++++++.               .+..+.++++|+||.++ +|..    +
T Consensus         3 ~~i~iIG~G~m-G~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav-~~~~~~~v~   80 (247)
T 3gt0_A            3 KQIGFIGCGNM-GMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSI-KPDLYASII   80 (247)
T ss_dssp             CCEEEECCSHH-HHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECS-CTTTHHHHC
T ss_pred             CeEEEECccHH-HHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEe-CHHHHHHHH
Confidence            57999999886 9999999999997    899998762               35667788999999999 4442    2


Q ss_pred             c--CCCcCCCcEEEEe
Q 017679          290 R--GSWLKPGAVVLDV  303 (368)
Q Consensus       290 ~--~e~ik~gavVIDv  303 (368)
                      .  ..++++|.+||.+
T Consensus        81 ~~l~~~l~~~~~vvs~   96 (247)
T 3gt0_A           81 NEIKEIIKNDAIIVTI   96 (247)
T ss_dssp             ---CCSSCTTCEEEEC
T ss_pred             HHHHhhcCCCCEEEEe
Confidence            1  2356778887743

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.82  E-value=0.0013  Score=61.82  Aligned_cols=72  Identities=19%  Similarity=0.233  Sum_probs=54.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------------------------CCHhhhc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------------KNPEQIT  273 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------------------------~~L~~~~  273 (368)
                      ++|.|||.|.+ |..+|..|++.|.+|++++++.                                       .++.+.+
T Consensus         5 ~kV~VIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~   83 (283)
T 4e12_A            5 TNVTVLGTGVL-GSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV   83 (283)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence            68999999875 9999999999999999997652                                       2344567


Q ss_pred             cCCCEEEEecCCCC-----ccc--CCCcCCCcEEEEeec
Q 017679          274 SEADIVIAAAGVAN-----LVR--GSWLKPGAVVLDVGT  305 (368)
Q Consensus       274 ~~ADIVIsAvG~p~-----~I~--~e~ik~gavVIDvg~  305 (368)
                      ++||+||.+++...     ++.  .+.+++++++++...
T Consensus        84 ~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS  122 (283)
T 4e12_A           84 KDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSS  122 (283)
T ss_dssp             TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             ccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            89999999997531     111  124678999988653

>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}

Probab=96.79  E-value=0.042  Score=53.18  Aligned_cols=169  Identities=14%  Similarity=0.060  Sum_probs=111.5

Q ss_pred             cHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCcc
Q 017679          118 SQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF  194 (368)
Q Consensus       118 S~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl  194 (368)
                      |..=--.=..++.++|.++.+.. +.+.+   -|-+.+.++-|..-  +|+|.+--|-  |-....+.+..       ++
T Consensus        47 STRTR~SFe~A~~~LGg~~i~l~-~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~lA~~~-------~v  114 (307)
T 3tpf_A           47 STRTRMAFELAITELGGKALFLS-SNDLQLSRGEPVKDTARVIGAM--VDFVMMRVNK--HETLLEFARYS-------KA  114 (307)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEC-TTTCCTTTSSCHHHHHHHHHHH--SSEEEEECSC--HHHHHHHHHHC-------SS
T ss_pred             CcchHHhHHHHHHHcCCeEEEcC-cccccCCCCCCHHHHHHHHHHh--CCEEEEecCC--hHHHHHHHHhC-------CC
Confidence            43333355778999999988764 22221   24466677766664  7899997662  22222222221       23


Q ss_pred             CcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCc-cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------
Q 017679          195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIM-GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------  266 (368)
Q Consensus       195 ~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~-GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------  266 (368)
                      -.+|.|-       +.+.||=+.+=+--++++...++ |++|++||-++.|.+.++..|...|++|+++.-..       
T Consensus       115 PVINag~-------~~~HPtQaLaDl~Ti~e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~  187 (307)
T 3tpf_A          115 PVINALS-------ELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEI  187 (307)
T ss_dssp             CEEEEEC-------SSCCHHHHHHHHHHHHHTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHH
T ss_pred             CEEeCCC-------CCcCcHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHH
Confidence            4567642       34679988884444555555899 99999999999999999999999999999986321       


Q ss_pred             ------------------CCHhhhccCCCEEEEec----CC------------CCcccCCCc---CCCcEEEEeec
Q 017679          267 ------------------KNPEQITSEADIVIAAA----GV------------ANLVRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       267 ------------------~~L~~~~~~ADIVIsAv----G~------------p~~I~~e~i---k~gavVIDvg~  305 (368)
                                        .++.+.+++||+|.+-.    |.            +.-|+.+.+   +++++|.=++-
T Consensus       188 ~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lP  263 (307)
T 3tpf_A          188 WEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLP  263 (307)
T ss_dssp             HHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCC
Confidence                              36678889999998765    32            111555543   57777777663

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.78  E-value=0.0027  Score=62.64  Aligned_cols=92  Identities=18%  Similarity=0.235  Sum_probs=66.3

Q ss_pred             cCCHHHHHHH----HHHhCC-CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhcc
Q 017679          213 PCTPKGCIEL----LIRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITS  274 (368)
Q Consensus       213 PcTa~gv~~l----L~~~~i-~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~  274 (368)
                      +.|.+|++..    +++.+. +++||+|+|+|.|++ |+.++..|...|++|.++.++..             +..+.+.
T Consensus       151 ~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnV-G~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~  229 (355)
T 1c1d_A          151 FTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAV-GGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLS  229 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGG
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhc
Confidence            5788886655    556788 899999999999885 99999999999999997764421             2234444


Q ss_pred             -CCCEEEEecCCCCcccCCC---cCCCcEEEEeecCC
Q 017679          275 -EADIVIAAAGVANLVRGSW---LKPGAVVLDVGTCP  307 (368)
Q Consensus       275 -~ADIVIsAvG~p~~I~~e~---ik~gavVIDvg~n~  307 (368)
                       ++||++.+ ...+.|+.+.   ++ ..+|+..+-.|
T Consensus       230 ~~~DIliP~-A~~~~I~~~~~~~lk-~~iVie~AN~p  264 (355)
T 1c1d_A          230 TPCDVFAPC-AMGGVITTEVARTLD-CSVVAGAANNV  264 (355)
T ss_dssp             CCCSEEEEC-SCSCCBCHHHHHHCC-CSEECCSCTTC
T ss_pred             CccceecHh-HHHhhcCHHHHhhCC-CCEEEECCCCC
Confidence             89998854 3556676543   33 56777766333

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.74  E-value=0.0019  Score=57.79  Aligned_cols=57  Identities=12%  Similarity=0.146  Sum_probs=47.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCCC---------------------CHhhhccCCCEEEEecCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK---------------------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~p  286 (368)
                      ++||+|+|.|+++-+|+.++..|+++|+  +|+++.|+..                     ++.+.++..|+||.++|..
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~   95 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   95 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence            5789999999988889999999999999  9999987532                     2345567889999988853

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.71  E-value=0.0024  Score=62.01  Aligned_cols=95  Identities=15%  Similarity=0.181  Sum_probs=67.9

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH---------------------
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP---------------------  269 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L---------------------  269 (368)
                      .+||.....+..|++.++...|++|+|+|+|+ ||..+++++...|++|+++.+....+                     
T Consensus       167 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~  245 (366)
T 1yqd_A          167 PLLCAGITVYSPLKYFGLDEPGKHIGIVGLGG-LGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQM  245 (366)
T ss_dssp             GGGTHHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHH
T ss_pred             hhhhhHHHHHHHHHhcCcCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHH
Confidence            35666566667777766655899999999865 69999999999999988876543221                     


Q ss_pred             hhhccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          270 EQITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       270 ~~~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      .+.+..+|+||.++|.+..+  .-+.++++..++.+|..
T Consensus       246 ~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~  284 (366)
T 1yqd_A          246 QAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAP  284 (366)
T ss_dssp             HHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCC
T ss_pred             HHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccC
Confidence            12234579999999876533  23467777788888864

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=96.70  E-value=0.0027  Score=64.12  Aligned_cols=77  Identities=26%  Similarity=0.374  Sum_probs=56.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------CCHhhh---------------ccCCCEE
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQI---------------TSEADIV  279 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------~~L~~~---------------~~~ADIV  279 (368)
                      -.|.+..|||.|. ||.|+|..|++.|.+|+.++++.               +.+++.               +++||+|
T Consensus         9 ~~~~~~~ViGlGy-vGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvv   87 (431)
T 3ojo_A            9 HHGSKLTVVGLGY-IGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVF   87 (431)
T ss_dssp             ---CEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEE
T ss_pred             ccCCccEEEeeCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEE
Confidence            4689999999987 59999999999999999998753               122211               3579999


Q ss_pred             EEecCCCCc-----------cc------CCCcCCCcEEEEeecCC
Q 017679          280 IAAAGVANL-----------VR------GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       280 IsAvG~p~~-----------I~------~e~ik~gavVIDvg~n~  307 (368)
                      |.++|.|.-           |.      .+.+++|++|||..+-+
T Consensus        88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~  132 (431)
T 3ojo_A           88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIA  132 (431)
T ss_dssp             EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCC
T ss_pred             EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCC
Confidence            999998752           11      23578899999987654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.69  E-value=0.0011  Score=54.30  Aligned_cols=56  Identities=25%  Similarity=0.213  Sum_probs=41.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------C---Hhhh-ccCCCEEEEecCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------N---PEQI-TSEADIVIAAAGVA  286 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------~---L~~~-~~~ADIVIsAvG~p  286 (368)
                      +++++++|+|.|. +|+.++..|.+.|++|+++.+...                  +   +.+. +.++|+||.++|.+
T Consensus         4 ~~~~~v~I~G~G~-iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            4 IKNKQFAVIGLGR-FGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             --CCSEEEECCSH-HHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             CcCCcEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            5688999999865 599999999999999998876421                  1   1122 56789999888865

>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.67  E-value=0.008  Score=58.28  Aligned_cols=162  Identities=12%  Similarity=0.142  Sum_probs=107.9

Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceee
Q 017679          124 NKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG  200 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G  200 (368)
                      .=..++.++|.++.+..- .+.+   -|-+.+.++-|..-  +|+|.+--|-  |    ..++.+...-   ++-.+|.|
T Consensus        62 SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~----~~~~~lA~~~---~vPVINag  129 (309)
T 4f2g_A           62 SFEAGIFQLGGHAVFMST-RDTQLGRGEPVEDSAQVISRM--VDIIMIRTFE--Q----DIIQRFAENS---RVPVINGL  129 (309)
T ss_dssp             HHHHHHHHTTCEEEEECC-SSCEETBEECHHHHHHHHHHH--CSEEEEECSC--H----HHHHHHHHTC---SSCEEEEE
T ss_pred             hHHHHHHHcCCeEEEcCc-ccccCCCCCCHHHHHHHHHHh--CCEEEEecCC--H----HHHHHHHHhC---CCCEEECC
Confidence            556789999999886642 2211   23466666666654  7899988662  2    2222222111   24466764


Q ss_pred             eccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC--------------
Q 017679          201 NLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------  265 (368)
Q Consensus       201 ~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~--------------  265 (368)
                             .+.+.||=+.+ ++.+.++.| +++|++|++||-++.|.+.++..|...|++|+++.-.              
T Consensus       130 -------~~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g  201 (309)
T 4f2g_A          130 -------TNEYHPCQVLADIFTYYEHRG-PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESA  201 (309)
T ss_dssp             -------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGG
T ss_pred             -------CCccCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcC
Confidence                   23466998888 445555554 7999999999999999999999999999999998521              


Q ss_pred             -----CCCHhhhccCCCEEEEec----CCC-----------Cc-ccCCCc---CCCcEEEEeec
Q 017679          266 -----TKNPEQITSEADIVIAAA----GVA-----------NL-VRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       266 -----t~~L~~~~~~ADIVIsAv----G~p-----------~~-I~~e~i---k~gavVIDvg~  305 (368)
                           +.++.+.+++||+|.+-+    |..           .+ |+.+.+   +++++|.=++-
T Consensus       202 ~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP  265 (309)
T 4f2g_A          202 PFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCLP  265 (309)
T ss_dssp             GGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECSS
T ss_pred             CeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCC
Confidence                 347788999999999754    321           12 555443   57788877763

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.66  E-value=0.0027  Score=58.26  Aligned_cols=70  Identities=13%  Similarity=0.120  Sum_probs=53.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCccc--CCCcC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVANLVR--GSWLK  295 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~I~--~e~ik  295 (368)
                      .++.|||.|.+ |..++..|.+.|..|++++++.               .++.+.++++|+||.+++ |..+.  -+.++
T Consensus         4 m~i~iiG~G~m-G~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~~~l~   81 (259)
T 2ahr_A            4 MKIGIIGVGKM-ASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVLKPLH   81 (259)
T ss_dssp             CEEEEECCSHH-HHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHHTTSC
T ss_pred             cEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHHHHhc
Confidence            47999998876 9999999999999999998752               355677789999999998 44221  11245


Q ss_pred             CCcEEEEee
Q 017679          296 PGAVVLDVG  304 (368)
Q Consensus       296 ~gavVIDvg  304 (368)
                      +|.++||+.
T Consensus        82 ~~~~vv~~~   90 (259)
T 2ahr_A           82 FKQPIISMA   90 (259)
T ss_dssp             CCSCEEECC
T ss_pred             cCCEEEEeC
Confidence            778888873

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.65  E-value=0.0022  Score=64.89  Aligned_cols=73  Identities=25%  Similarity=0.300  Sum_probs=56.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------CCHhhhccCCCE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI  278 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------~~L~~~~~~ADI  278 (368)
                      .+|.|||.|. ||.++|..|++.|.+|+++.++.                                  .++.+.+++||+
T Consensus         3 mkI~VIG~G~-vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv   81 (450)
T 3gg2_A            3 LDIAVVGIGY-VGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI   81 (450)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred             CEEEEECcCH-HHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence            4899999976 59999999999999999997642                                  234456789999


Q ss_pred             EEEecCCCC---------ccc------CCCcCCCcEEEEeecC
Q 017679          279 VIAAAGVAN---------LVR------GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       279 VIsAvG~p~---------~I~------~e~ik~gavVIDvg~n  306 (368)
                      ||.+++.|.         .+.      ...+++|.+||+..+-
T Consensus        82 ViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv  124 (450)
T 3gg2_A           82 IFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV  124 (450)
T ss_dssp             EEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred             EEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence            999998772         111      1346789999988753

>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1

Probab=96.65  E-value=0.029  Score=54.29  Aligned_cols=171  Identities=12%  Similarity=0.030  Sum_probs=113.6

Q ss_pred             cHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCcc
Q 017679          118 SQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF  194 (368)
Q Consensus       118 S~~Yv~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl  194 (368)
                      |..---.=..++.++|.++.++.-....   .-|-+.+.++-|+.-  +|+|.+--|  .|-....+.+..       ++
T Consensus        55 STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~--~D~iviR~~--~~~~~~~la~~~-------~v  123 (308)
T 1ml4_A           55 STRTRLSFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQY--CDVIVIRHP--KEGAARLAAEVA-------EV  123 (308)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTT--CSEEEEEES--STTHHHHHHHTC-------SS
T ss_pred             CchHHHHHHHHHHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHh--CcEEEEecC--ChhHHHHHHHhC-------CC
Confidence            4333335578899999998776432211   124577777777764  789999876  333334443332       23


Q ss_pred             CcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhCCCEEEEEeCC-------
Q 017679          195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL-------  265 (368)
Q Consensus       195 ~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~gAtVti~h~~-------  265 (368)
                      -.+|.|-   |   +.+.||=+.+=+--++++...++|++|++||-+  +-|.+.++..|...|++|+++.-.       
T Consensus       124 PVINag~---g---~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~  197 (308)
T 1ml4_A          124 PVINAGD---G---SNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRH  197 (308)
T ss_dssp             CEEEEEE---T---TSCCHHHHHHHHHHHHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHH
T ss_pred             CEEeCcc---C---CccCcHHHHHHHHHHHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHH
Confidence            4567532   1   456799888855555555568999999999986  357999999999999999998632       


Q ss_pred             --------------CCCHhhhccCCCEEEEecCC---------------CCcccCCCc---CCCcEEEEeec
Q 017679          266 --------------TKNPEQITSEADIVIAAAGV---------------ANLVRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       266 --------------t~~L~~~~~~ADIVIsAvG~---------------p~~I~~e~i---k~gavVIDvg~  305 (368)
                                    +.++.+.+++||+|.+-.-.               +.-|+.+.+   +++++|.=++.
T Consensus       198 ~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP  269 (308)
T 1ml4_A          198 IVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLP  269 (308)
T ss_dssp             HHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred             HHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCC
Confidence                          24677889999999975521               222566655   56777776664

>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}

Probab=96.62  E-value=0.042  Score=53.90  Aligned_cols=208  Identities=13%  Similarity=0.135  Sum_probs=124.3

Q ss_pred             eeecHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHH
Q 017679           76 VIDGKSIAEEIRSGIDKEVRRMKKSIG---KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDE  149 (368)
Q Consensus        76 ildGk~ia~~i~~~i~~~v~~l~~~~g---~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~e  149 (368)
                      +|+-..+.++=.+.|-+...++|+...   .+-+....++- .| |..=--.=..++.++|.++.+..- .+.+   -|-
T Consensus        38 lLsi~dls~~ei~~ll~~A~~lk~~~~~~~L~gK~la~lF~-ep-STRTR~SFE~A~~~LGg~vi~l~~-~~ss~~kgEs  114 (340)
T 4ep1_A           38 LLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFD-KH-STRTRVSFEAGMVQLGGHGMFLNG-KEMQMGRGET  114 (340)
T ss_dssp             BSSGGGSCHHHHHHHHHHHHHHHHSCCCCTTTTCEEEEEES-SC-CHHHHHHHHHHHHHTTCEEEEEES-CC------CC
T ss_pred             ccchhhCCHHHHHHHHHHHHHHHhcccccccCCceEEEEec-CC-CccHHHHHHHHHHHcCCeEEEcCc-ccccCCCCCC
Confidence            344444443333444444455554311   12233334442 33 333333557889999999987652 2221   233


Q ss_pred             HHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCC
Q 017679          150 VLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV  228 (368)
Q Consensus       150 l~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i  228 (368)
                      +.+.++-|..-  +|+|.+--|-  |-....+.+..       ++-.+|.|       .+...||=+.+ ++.+.++.| 
T Consensus       115 l~DTarvLs~y--~D~IviR~~~--~~~~~~lA~~~-------~vPVINag-------~~~~HPtQaLaDl~TI~E~~G-  175 (340)
T 4ep1_A          115 VSDTAKVLSHY--IDGIMIRTFS--HADVEELAKES-------SIPVINGL-------TDDHHPCQALADLMTIYEETN-  175 (340)
T ss_dssp             TTHHHHHHHHH--CSEEEEECSC--HHHHHHHHHHC-------SSCEEEEE-------CSSCCHHHHHHHHHHHHHHHS-
T ss_pred             HHHHHHHHHHh--CCEEEEecCC--hhHHHHHHHhC-------CCCEEeCC-------CCCCCcHHHHHHHHHHHHHhC-
Confidence            55566666553  7899987652  22222222222       23456754       13467998888 455555554 


Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEec
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      .++|++|++||-++.|.+.++..|...|++|+++.-.                         +.++.+.+++||+|.+-.
T Consensus       176 ~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~  255 (340)
T 4ep1_A          176 TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDV  255 (340)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecC
Confidence            6999999999999889999999999999999998532                         136778899999998654


Q ss_pred             ----CCC----------Cc-ccCCCc---CCCcEEEEeec
Q 017679          284 ----GVA----------NL-VRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       284 ----G~p----------~~-I~~e~i---k~gavVIDvg~  305 (368)
                          |..          .+ |+.+.+   +++++|.=++.
T Consensus       256 w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLP  295 (340)
T 4ep1_A          256 WMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLP  295 (340)
T ss_dssp             C------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSC
T ss_pred             ccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCC
Confidence                211          12 555543   57888877763

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.61  E-value=0.0024  Score=65.49  Aligned_cols=75  Identities=16%  Similarity=0.266  Sum_probs=58.1

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhcc---CCCEEEEecCCCCc-
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITS---EADIVIAAAGVANL-  288 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~~---~ADIVIsAvG~p~~-  288 (368)
                      .++|.|||.|.+ |.++|..|.+.|.+|++++++.                   .++++.++   ++|+||.+++.+.. 
T Consensus         4 ~~kIgiIGlG~M-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v   82 (484)
T 4gwg_A            4 QADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAV   82 (484)
T ss_dssp             CBSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHH
T ss_pred             CCEEEEEChhHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHH
Confidence            368999999876 9999999999999999998763                   23444444   59999999987532 


Q ss_pred             ---cc--CCCcCCCcEEEEeecCC
Q 017679          289 ---VR--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       289 ---I~--~e~ik~gavVIDvg~n~  307 (368)
                         +.  .+.+++|.+|||++...
T Consensus        83 ~~vl~~l~~~L~~g~iIId~st~~  106 (484)
T 4gwg_A           83 DDFIEKLVPLLDTGDIIIDGGNSE  106 (484)
T ss_dssp             HHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCC
Confidence               21  24678999999998654

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.60  E-value=0.0028  Score=64.08  Aligned_cols=74  Identities=22%  Similarity=0.269  Sum_probs=55.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhC--CCEEEEEeCCC---------------------------------CCHhhhccCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT---------------------------------KNPEQITSEAD  277 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t---------------------------------~~L~~~~~~AD  277 (368)
                      ++|.|||.|.+ |.++|..|++.  |.+|++++++.                                 .++.+.+++||
T Consensus         6 mkI~VIG~G~m-G~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD   84 (467)
T 2q3e_A            6 KKICCIGAGYV-GGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD   84 (467)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred             cEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence            58999999875 99999999998  78999997642                                 12334567899


Q ss_pred             EEEEecCCCCccc--------------------CCCcCCCcEEEEeecCC
Q 017679          278 IVIAAAGVANLVR--------------------GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       278 IVIsAvG~p~~I~--------------------~e~ik~gavVIDvg~n~  307 (368)
                      +||.+++.|.-..                    ...+++|++|||.+..+
T Consensus        85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~  134 (467)
T 2q3e_A           85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVP  134 (467)
T ss_dssp             EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCC
T ss_pred             EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCC
Confidence            9999998765321                    12467899999986544

>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}

Probab=96.60  E-value=0.013  Score=56.28  Aligned_cols=178  Identities=14%  Similarity=0.132  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHcCC--CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHHhhhccCc
Q 017679           88 SGIDKEVRRMKKSIG--KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSI  163 (368)
Q Consensus        88 ~~i~~~v~~l~~~~g--~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~--~~~el~~~I~~LN~D~~V  163 (368)
                      +.|-+...++|+...  .+-+.. .++- . .|..---.=..++.++|.++.++.-....  .-|-+.+.++-|+.- .+
T Consensus        16 ~~ll~~A~~lk~~~~~~L~gk~~-~lF~-e-~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~-~~   91 (291)
T 3d6n_B           16 EEILKYAKEFKEGKEETIKASAV-LFFS-E-PSTRTRLSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEGL-GF   91 (291)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCEEE-EEES-S-CCHHHHHHHHHHHHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHHT-TC
T ss_pred             HHHHHHHHHHHhcccccCCCCEE-EEec-C-CCccHHHHHHHHHHHhCCeEEEECCccCcccCCCcHHHHHHHHHHh-cC
Confidence            344445555553211  122333 4443 2 34333345678899999999888632210  123466666666652 25


Q ss_pred             cEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEcc--C
Q 017679          164 NGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGR--S  241 (368)
Q Consensus       164 ~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~--g  241 (368)
                      |+|.+--|-...+.+. +.+..+       +-.+|.|.      .+...||=+.+=+--++++...++|++|+++|-  +
T Consensus        92 D~iviR~~~~~~~~~~-la~~~~-------vPVINAG~------g~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGDl~~  157 (291)
T 3d6n_B           92 DYVVFRVPFVFFPYKE-IVKSLN-------LRLVNAGD------GTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKH  157 (291)
T ss_dssp             SEEEEEESSCCCSCHH-HHHTCS-------SEEEEEEE------TTTBCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTT
T ss_pred             CEEEEEcCChHHHHHH-HHHhCC-------CCEEeCcc------CCCcCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCC
Confidence            8999988754433321 333321       34556542      345679988884444444445899999999998  7


Q ss_pred             ccchHHHHHHHhhCCCEEEEEeCC--------------CCCHhhhccCCCEEEEecC
Q 017679          242 NIVGLPTSLLLQRHHATVSIVHAL--------------TKNPEQITSEADIVIAAAG  284 (368)
Q Consensus       242 ~~VGrpla~lL~~~gAtVti~h~~--------------t~~L~~~~~~ADIVIsAvG  284 (368)
                      +.|.+.++..|...|++|+++.-.              +.++.+.+++||+|.+ +-
T Consensus       158 ~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~  213 (291)
T 3d6n_B          158 SRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LR  213 (291)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CC
T ss_pred             CchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eC
Confidence            778999999999999999998632              3567889999999998 54

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=96.60  E-value=0.0017  Score=62.15  Aligned_cols=71  Identities=8%  Similarity=0.174  Sum_probs=54.5

Q ss_pred             cceEEEEccCccchHHHHHHHhhCC----CEEEEEeCCCC----------------CHhhhccCCCEEEEecCCCCcc--
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALTK----------------NPEQITSEADIVIAAAGVANLV--  289 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t~----------------~L~~~~~~ADIVIsAvG~p~~I--  289 (368)
                      ..+|.|||.|.+ |.+++..|.+.|    ..|++++++..                +..+.+++||+||.++. |..+  
T Consensus        22 ~mkI~iIG~G~m-G~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~   99 (322)
T 2izz_A           22 SMSVGFIGAGQL-AFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPF   99 (322)
T ss_dssp             CCCEEEESCSHH-HHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHH
T ss_pred             CCEEEEECCCHH-HHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHH
Confidence            357999999875 999999999998    68999987642                34456778999999997 4322  


Q ss_pred             --c--CCCcCCCcEEEEee
Q 017679          290 --R--GSWLKPGAVVLDVG  304 (368)
Q Consensus       290 --~--~e~ik~gavVIDvg  304 (368)
                        .  ...++++.+|||+.
T Consensus       100 vl~~l~~~l~~~~ivvs~s  118 (322)
T 2izz_A          100 ILDEIGADIEDRHIVVSCA  118 (322)
T ss_dssp             HHHHHGGGCCTTCEEEECC
T ss_pred             HHHHHHhhcCCCCEEEEeC
Confidence              1  23567889999984

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.59  E-value=0.0019  Score=65.27  Aligned_cols=74  Identities=16%  Similarity=0.176  Sum_probs=55.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------CHhhhccCCCEEEEecCCC-
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQITSEADIVIAAAGVA-  286 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------~L~~~~~~ADIVIsAvG~p-  286 (368)
                      ++|+|+|+|+|++ |+.++..|++.|++|++++++..                       ++.+.++++|+||+++|.. 
T Consensus         2 ~~k~VlViGaG~i-G~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~   80 (450)
T 1ff9_A            2 ATKSVLMLGSGFV-TRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF   80 (450)
T ss_dssp             CCCEEEEECCSTT-HHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred             CCCEEEEECCCHH-HHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence            4789999998775 99999999999999999987520                       2335567899999999853 


Q ss_pred             Cc-ccCCCcCCCcEEEEeec
Q 017679          287 NL-VRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       287 ~~-I~~e~ik~gavVIDvg~  305 (368)
                      +. +..+.++.|..++|..+
T Consensus        81 ~~~i~~a~l~~g~~vvd~~~  100 (450)
T 1ff9_A           81 HATVIKSAIRQKKHVVTTSY  100 (450)
T ss_dssp             HHHHHHHHHHHTCEEEESSC
T ss_pred             chHHHHHHHhCCCeEEEeec
Confidence            21 44456777888888754

>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=96.59  E-value=0.088  Score=50.77  Aligned_cols=170  Identities=15%  Similarity=0.103  Sum_probs=111.7

Q ss_pred             ccHHHHHHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCcc
Q 017679          117 DSQTYVRNKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF  194 (368)
Q Consensus       117 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~--~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl  194 (368)
                      .|..---.=..++.++|.++.++.-....  .-|-+.+.++-|+.-  +|+|.+--|-  |-....+.+..       .+
T Consensus        55 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~la~~~-------~v  123 (301)
T 2ef0_A           55 PSLRTRTTLEVAMVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERF--VEGIAARVFR--HETVEALARHA-------KV  123 (301)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTT--CSEEEEECSS--HHHHHHHHHHC-------SS
T ss_pred             CCcchHHHHHHHHHHcCCeEEEECCcccccCCCCchHHHHHHHHHh--CCEEEEecCC--hHHHHHHHHHC-------CC
Confidence            34333345678899999999888632211  123477777777764  6899987662  22222222221       24


Q ss_pred             CcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC--------
Q 017679          195 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------  265 (368)
Q Consensus       195 ~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~--------  265 (368)
                      -.+|.|       .+...||=+.+ ++.+.++. ..++|++|+++|-++-|.+.++..|...|++|+++.-.        
T Consensus       124 PVINa~-------~~~~HPtQaLaDl~Ti~e~~-g~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~  195 (301)
T 2ef0_A          124 PVVNAL-------SDRAHPLQALADLLTLKEVF-GGLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGL  195 (301)
T ss_dssp             CEEEEE-------CSSCCHHHHHHHHHHHHHHH-SCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHH
T ss_pred             CEEeCC-------CCccCchHHHHHHHHHHHHh-CCcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHH
Confidence            556743       24567998888 44444444 48999999999998888999999999999999999643        


Q ss_pred             --------CCCHhhhccCCCEEEEec----CCC-----------Cc-ccCCCc---CCCcEEEEeec
Q 017679          266 --------TKNPEQITSEADIVIAAA----GVA-----------NL-VRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       266 --------t~~L~~~~~~ADIVIsAv----G~p-----------~~-I~~e~i---k~gavVIDvg~  305 (368)
                              +.++.+.+++||+|.+-.    |..           .+ |+.+.+   +++++|.=++-
T Consensus       196 ~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP  262 (301)
T 2ef0_A          196 LKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLP  262 (301)
T ss_dssp             HHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECSC
T ss_pred             HhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCCC
Confidence                    346778899999999733    221           12 444433   67788877763

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.58  E-value=0.0025  Score=64.47  Aligned_cols=81  Identities=22%  Similarity=0.288  Sum_probs=56.5

Q ss_pred             HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------CCHhh
Q 017679          224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQ  271 (368)
Q Consensus       224 ~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------~~L~~  271 (368)
                      +..+-...-.+|.|||.|. +|.++|..|++ |.+|+++.+..                                .++.+
T Consensus        28 ~~~~r~~~~mkIaVIGlG~-mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~e  105 (432)
T 3pid_A           28 QQMGRGSEFMKITISGTGY-VGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHD  105 (432)
T ss_dssp             -------CCCEEEEECCSH-HHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred             cccccccCCCEEEEECcCH-HHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHH
Confidence            3334444556999999986 59999999987 99999997541                                24456


Q ss_pred             hccCCCEEEEecCCCC----------ccc------CCCcCCCcEEEEeecCC
Q 017679          272 ITSEADIVIAAAGVAN----------LVR------GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~----------~I~------~e~ik~gavVIDvg~n~  307 (368)
                      .+++||+||.+++.|.          .+.      .. +++|++|||..+-+
T Consensus       106 a~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~  156 (432)
T 3pid_A          106 AYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIP  156 (432)
T ss_dssp             HHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCC
T ss_pred             HHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence            7889999999998762          110      12 68999999987654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.56  E-value=0.0014  Score=61.44  Aligned_cols=72  Identities=17%  Similarity=0.305  Sum_probs=54.9

Q ss_pred             ceEEEEcc-CccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhccCCCEEEEecCCCC---ccc--CCC
Q 017679          233 KNAVVIGR-SNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGVAN---LVR--GSW  293 (368)
Q Consensus       233 K~VvVIG~-g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~~ADIVIsAvG~p~---~I~--~e~  293 (368)
                      ++|.|||. |. +|.+++..|.+.|.+|++++++..             +..+.++++|+||.+++...   .+.  ...
T Consensus        12 m~I~iIG~tG~-mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~   90 (286)
T 3c24_A           12 KTVAILGAGGK-MGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVAEDIVPR   90 (286)
T ss_dssp             CEEEEETTTSH-HHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHHHHHGGG
T ss_pred             CEEEEECCCCH-HHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHHHHHHHh
Confidence            58999999 66 599999999999999999987531             34466789999999997432   121  134


Q ss_pred             cCCCcEEEEeec
Q 017679          294 LKPGAVVLDVGT  305 (368)
Q Consensus       294 ik~gavVIDvg~  305 (368)
                      ++++.+|||+..
T Consensus        91 l~~~~ivv~~s~  102 (286)
T 3c24_A           91 VRPGTIVLILDA  102 (286)
T ss_dssp             SCTTCEEEESCS
T ss_pred             CCCCCEEEECCC
Confidence            678999999654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.56  E-value=0.0027  Score=59.53  Aligned_cols=58  Identities=19%  Similarity=0.219  Sum_probs=46.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------------CHhhhccCCCEEEEec
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------------NPEQITSEADIVIAAA  283 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------------~L~~~~~~ADIVIsAv  283 (368)
                      .+|+||.++|.|+|.-+|+.+|..|+++||+|.++.+...                        ...+..-.-|++|+.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnA   86 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHML   86 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4789999999999888899999999999999999987531                        1223445679999887


Q ss_pred             CC
Q 017679          284 GV  285 (368)
Q Consensus       284 G~  285 (368)
                      |.
T Consensus        87 G~   88 (261)
T 4h15_A           87 GG   88 (261)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.54  E-value=0.0077  Score=55.87  Aligned_cols=80  Identities=19%  Similarity=0.256  Sum_probs=56.3

Q ss_pred             CCccceEEEEcc----------------CccchHHHHHHHhhCCCEEEEEeCCCC-------------C-------Hhhh
Q 017679          229 EIMGKNAVVIGR----------------SNIVGLPTSLLLQRHHATVSIVHALTK-------------N-------PEQI  272 (368)
Q Consensus       229 ~l~GK~VvVIG~----------------g~~VGrpla~lL~~~gAtVti~h~~t~-------------~-------L~~~  272 (368)
                      +++||+|+|-|.                |+-+|..+|..|.++||.|+++++.+.             +       ..+.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~~~~~~~~v~~~   84 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNAS   84 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCcHHHHHHHHHHh
Confidence            578999999998                354599999999999999999876431             1       1233


Q ss_pred             ccCCCEEEEecCCCCc----ccCCCcCC---C--cEEEEeecCCC
Q 017679          273 TSEADIVIAAAGVANL----VRGSWLKP---G--AVVLDVGTCPV  308 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~----I~~e~ik~---g--avVIDvg~n~~  308 (368)
                      ....|++|+++|...+    ...+-+|+   +  ...+.+--+|+
T Consensus        85 ~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pd  129 (226)
T 1u7z_A           85 VQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPD  129 (226)
T ss_dssp             GGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCC
T ss_pred             cCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHH
Confidence            4679999999986543    23445666   2  46777777664

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.54  E-value=0.0034  Score=54.99  Aligned_cols=54  Identities=15%  Similarity=0.148  Sum_probs=44.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHh------------------hhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPE------------------QITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~------------------~~~~~ADIVIsAvG~p  286 (368)
                      ++|+|+|+++-+|+.++..|+++|++|+++.|+...+.                  +.+..+|+||.++|.+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~   72 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGIS   72 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence            36999999888899999999999999999988642211                  4567899999998864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.54  E-value=0.0031  Score=54.44  Aligned_cols=55  Identities=18%  Similarity=0.224  Sum_probs=44.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~p  286 (368)
                      +++|+|+|+++-+|+.++..|+++|++|+++.|+..                     ++.+.++.+|+||.++|..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence            479999999888999999999999999999877521                     2345667789999888743

>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A

Probab=96.54  E-value=0.018  Score=56.32  Aligned_cols=170  Identities=12%  Similarity=0.064  Sum_probs=111.8

Q ss_pred             ccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCc
Q 017679          117 DSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG  193 (368)
Q Consensus       117 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDg  193 (368)
                      .|..=--.=..++.++|.++.++.- .+.+   -|-+.+.++-|..-  +|+|.+--|  .|-....+.++.       +
T Consensus        55 ~STRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~--~D~IviR~~--~~~~~~~lA~~s-------~  122 (335)
T 1dxh_A           55 TSTRTRCAFEVAAYDQGANVTYIDP-NSSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQEIVEELAKFA-------G  122 (335)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECT-TTCCBTTTBCHHHHHHHHHHH--CSEEEEECS--CHHHHHHHHHHS-------S
T ss_pred             CCcchHHHHHHHHHHcCCeEEEECC-ccccCcCCCcHHHHHHHHHhh--CCEEEEecC--ChhHHHHHHHhC-------C
Confidence            3433334557889999999887752 2221   23466666666654  689998765  222222222222       2


Q ss_pred             cCcceeeeccccCCcCccccCCHHHHHHHHHHhCC-CCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC------
Q 017679          194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGV-EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------  265 (368)
Q Consensus       194 l~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i-~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~------  265 (368)
                      +-.+|.|       .+.+.||=+.+=+--++++.. +++|++++++|-+ +.|++.++..|...|++|+++.-.      
T Consensus       123 vPVINa~-------~~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~  195 (335)
T 1dxh_A          123 VPVFNGL-------TDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHD  195 (335)
T ss_dssp             SCEEEEE-------CSSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCH
T ss_pred             CCEEcCC-------CCCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCH
Confidence            4556743       245679988884444444445 8999999999997 668999999999999999998532      


Q ss_pred             -------------------CCCHhhhccCCCEEEEec----CC-------------CCcccCCCc----CCCcEEEEeec
Q 017679          266 -------------------TKNPEQITSEADIVIAAA----GV-------------ANLVRGSWL----KPGAVVLDVGT  305 (368)
Q Consensus       266 -------------------t~~L~~~~~~ADIVIsAv----G~-------------p~~I~~e~i----k~gavVIDvg~  305 (368)
                                         +.++.+.+++||+|.+-+    |.             |.-|+.+.+    +|+++|.=++.
T Consensus       196 ~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP  275 (335)
T 1dxh_A          196 EFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP  275 (335)
T ss_dssp             HHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSC
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCC
Confidence                               346778899999999733    31             112555544    67788877764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.53  E-value=0.0012  Score=63.34  Aligned_cols=94  Identities=17%  Similarity=0.027  Sum_probs=67.0

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhh-
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQI-  272 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~-  272 (368)
                      ||.+..+...+.+..---.|++|+|+|+|+.+|..++.++...||+|+++.+...                   ++.+. 
T Consensus       126 ~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~  205 (340)
T 3gms_A          126 YINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETV  205 (340)
T ss_dssp             SHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred             cchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHH
Confidence            5556666666644333346999999999977899999999999999988876532                   22221 


Q ss_pred             ---c--cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          273 ---T--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ---~--~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                         +  +..|+||.++|.+... ..+.++++-.++.+|..
T Consensus       206 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~  245 (340)
T 3gms_A          206 MELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLL  245 (340)
T ss_dssp             HHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCT
T ss_pred             HHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEeec
Confidence               1  2579999999876542 22578888888888864

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.52  E-value=0.0012  Score=63.02  Aligned_cols=36  Identities=22%  Similarity=0.360  Sum_probs=32.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ++++||+|+|||.|. ||...+..|++.||.|+++..
T Consensus         9 ~~l~~k~VLVVGgG~-va~rka~~Ll~~Ga~VtViap   44 (274)
T 1kyq_A            9 HQLKDKRILLIGGGE-VGLTRLYKLMPTGCKLTLVSP   44 (274)
T ss_dssp             ECCTTCEEEEEEESH-HHHHHHHHHGGGTCEEEEEEE
T ss_pred             EEcCCCEEEEECCcH-HHHHHHHHHHhCCCEEEEEcC
Confidence            578999999999887 599999999999999999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.51  E-value=0.0042  Score=60.01  Aligned_cols=94  Identities=18%  Similarity=0.228  Sum_probs=66.9

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH---------------------h
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP---------------------E  270 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L---------------------~  270 (368)
                      +||.....+..|++.++...|.+|+|+|+|. ||..+++++...|++|+++.+....+                     .
T Consensus       161 l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~  239 (357)
T 2cf5_A          161 LLCAGVTVYSPLSHFGLKQPGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMS  239 (357)
T ss_dssp             GGTHHHHHHHHHHHTSTTSTTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHH
T ss_pred             hhhhHHHHHHHHHhcCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHH
Confidence            4665556666777666554899999999865 69999999999999988876543221                     1


Q ss_pred             hhccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          271 QITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ~~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      +....+|+||.++|.+..+  .-+.++++-.++.+|..
T Consensus       240 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~  277 (357)
T 2cf5_A          240 ELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVI  277 (357)
T ss_dssp             HSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCC
T ss_pred             HhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCC
Confidence            1223578999888876543  33677888788888864

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=96.49  E-value=0.0029  Score=64.88  Aligned_cols=74  Identities=19%  Similarity=0.216  Sum_probs=57.2

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhccC---CCEEEEecCCCCc-
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSE---ADIVIAAAGVANL-  288 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~~~---ADIVIsAvG~p~~-  288 (368)
                      .++|.|||.|.+ |.+++..|++.|.+|++++++.                   .++.+.++.   +|+||.+++.+.. 
T Consensus        10 ~~~IgvIGlG~M-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v   88 (497)
T 2p4q_A           10 SADFGLIGLAVM-GQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPV   88 (497)
T ss_dssp             CCSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHH
T ss_pred             CCCEEEEeeHHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHH
Confidence            468999999876 9999999999999999998753                   234455555   9999999987532 


Q ss_pred             ---cc--CCCcCCCcEEEEeecC
Q 017679          289 ---VR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 ---I~--~e~ik~gavVIDvg~n  306 (368)
                         +.  ...+++|.+|||++..
T Consensus        89 ~~vl~~l~~~l~~g~iIId~s~~  111 (497)
T 2p4q_A           89 DALINQIVPLLEKGDIIIDGGNS  111 (497)
T ss_dssp             HHHHHHHGGGCCTTCEEEECSCC
T ss_pred             HHHHHHHHHhCCCCCEEEECCCC
Confidence               21  2357889999998743

>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A

Probab=96.48  E-value=0.037  Score=53.67  Aligned_cols=162  Identities=14%  Similarity=0.189  Sum_probs=109.4

Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceee
Q 017679          124 NKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG  200 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G  200 (368)
                      .=..++.++|.++.+..-. +.+   -|-+.+.++-|+.-  +|+|.+--|-  |-....+.+..       ++-.+|.|
T Consensus        63 SFe~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~lA~~~-------~vPVINa~  130 (315)
T 1pvv_A           63 SFEVAMAHLGGHALYLNAQ-DLQLRRGETIADTARVLSRY--VDAIMARVYD--HKDVEDLAKYA-------TVPVINGL  130 (315)
T ss_dssp             HHHHHHHHTTSEEEEEEGG-GSTTTTTCCHHHHHHHHTTT--CSEEEEECSS--HHHHHHHHHHC-------SSCEEEEE
T ss_pred             HHHHHHHHcCCeEEEECCc-cccCCCCcCHHHHHHHHHHh--CcEEEEecCc--hHHHHHHHHhC-------CCCEEcCC
Confidence            5578899999999888632 211   24567777777764  6899998662  22222222222       24456742


Q ss_pred             eccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC--------------
Q 017679          201 NLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------  265 (368)
Q Consensus       201 ~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~--------------  265 (368)
                             .+.+.||=+.+ ++.+.++. ..++|++|++||-++.|.+.++..|...|++|+++.-.              
T Consensus       131 -------~~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~  202 (315)
T 1pvv_A          131 -------SDFSHPCQALADYMTIWEKK-GTIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQ  202 (315)
T ss_dssp             -------CSSCCHHHHHHHHHHHHHHH-SCCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHH
T ss_pred             -------CCCCCcHHHHHHHHHHHHHh-CCcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHH
Confidence                   23567998888 44444544 48999999999998888999999999999999998632              


Q ss_pred             -----------CCCHhhhccCCCEEEEec----CC----C-------Cc-ccCCCc---CCCcEEEEeec
Q 017679          266 -----------TKNPEQITSEADIVIAAA----GV----A-------NL-VRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       266 -----------t~~L~~~~~~ADIVIsAv----G~----p-------~~-I~~e~i---k~gavVIDvg~  305 (368)
                                 +.++.+.+++||+|.+-.    |.    +       .+ |+.+.+   +++++|.=++-
T Consensus       203 ~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP  272 (315)
T 1pvv_A          203 NAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLP  272 (315)
T ss_dssp             HHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSC
T ss_pred             HHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCC
Confidence                       245678899999999743    31    1       12 455443   67888877763

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.48  E-value=0.0032  Score=59.55  Aligned_cols=68  Identities=15%  Similarity=0.181  Sum_probs=53.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeC--CC-------------------------C--CHhhhccCCCEEEEecC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHA--LT-------------------------K--NPEQITSEADIVIAAAG  284 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~--~t-------------------------~--~L~~~~~~ADIVIsAvG  284 (368)
                      +|.|||.|.+ |.+++..|.+.|.+|+++.+  +.                         .  ++.+.++++|+||.+++
T Consensus         2 ~I~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~   80 (335)
T 1txg_A            2 IVSILGAGAM-GSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS   80 (335)
T ss_dssp             EEEEESCCHH-HHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred             EEEEECcCHH-HHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence            6899999875 99999999999999999987  31                         1  34455788999999998


Q ss_pred             CCCc------ccCCCcCCCcEEEEee
Q 017679          285 VANL------VRGSWLKPGAVVLDVG  304 (368)
Q Consensus       285 ~p~~------I~~e~ik~gavVIDvg  304 (368)
                      .+..      +. . ++++.+|||+.
T Consensus        81 ~~~~~~v~~~i~-~-l~~~~~vv~~~  104 (335)
T 1txg_A           81 TDGVLPVMSRIL-P-YLKDQYIVLIS  104 (335)
T ss_dssp             GGGHHHHHHHHT-T-TCCSCEEEECC
T ss_pred             hHHHHHHHHHHh-c-CCCCCEEEEEc
Confidence            6542      22 3 78899999984

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.47  E-value=0.0024  Score=64.13  Aligned_cols=126  Identities=17%  Similarity=0.182  Sum_probs=72.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---CHhhhccCCCEEEEecC-CCCcccCCCcC--CCcEEEE
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---NPEQITSEADIVIAAAG-VANLVRGSWLK--PGAVVLD  302 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---~L~~~~~~ADIVIsAvG-~p~~I~~e~ik--~gavVID  302 (368)
                      +++||+|.|||.|+. |+++|.+|.++|++|+++..+..   ...+.+++..|-+. .| .+.    +.+.  ...+|+-
T Consensus         6 ~~~~k~v~viG~G~s-G~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~-~g~~~~----~~~~~~~d~vv~s   79 (451)
T 3lk7_A            6 TFENKKVLVLGLARS-GEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV-CGSHPL----ELLDEDFCYMIKN   79 (451)
T ss_dssp             TTTTCEEEEECCTTT-HHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE-ESCCCG----GGGGSCEEEEEEC
T ss_pred             hcCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE-ECCChH----HhhcCCCCEEEEC
Confidence            578999999999997 99999999999999999988542   12223333333222 12 111    1111  1344444


Q ss_pred             eecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          303 VGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       303 vg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      -|+++..+....-.+.+-+++++.++-.-.... .+--|-|--|.-|+..|+.++++.+
T Consensus        80 pgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~-~~IaVTGTnGKTTTt~ml~~iL~~~  137 (451)
T 3lk7_A           80 PGIPYNNPMVKKALEKQIPVLTEVELAYLVSES-QLIGITGSNGKTTTTTMIAEVLNAG  137 (451)
T ss_dssp             TTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCS-EEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred             CcCCCCChhHHHHHHCCCcEEeHHHHHHHhcCC-CEEEEECCCCHHHHHHHHHHHHHhc
Confidence            454432100000001133577887763211111 2224567788999999999988764

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.46  E-value=0.0053  Score=58.93  Aligned_cols=94  Identities=19%  Similarity=0.121  Sum_probs=67.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhh---------------hccCC
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQ---------------ITSEA  276 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~---------------~~~~A  276 (368)
                      +||.....+..|++.++ -.|.+|+|+|+|. ||..+++++...|++|+.+.+....++.               ..+.+
T Consensus       158 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~  235 (348)
T 3two_A          158 LLCAGITTYSPLKFSKV-TKGTKVGVAGFGG-LGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEEL  235 (348)
T ss_dssp             GGTHHHHHHHHHHHTTC-CTTCEEEEESCSH-HHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCE
T ss_pred             hhhhHHHHHHHHHhcCC-CCCCEEEEECCcH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCC
Confidence            46666666666766533 3699999999865 6999999999999999988765443321               11257


Q ss_pred             CEEEEecCCCCcc--cCCCcCCCcEEEEeecCC
Q 017679          277 DIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       277 DIVIsAvG~p~~I--~~e~ik~gavVIDvg~n~  307 (368)
                      |+||.++|.+..+  .-+.++++-.++.+|...
T Consensus       236 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  268 (348)
T 3two_A          236 DFIISTIPTHYDLKDYLKLLTYNGDLALVGLPP  268 (348)
T ss_dssp             EEEEECCCSCCCHHHHHTTEEEEEEEEECCCCC
T ss_pred             CEEEECCCcHHHHHHHHHHHhcCCEEEEECCCC
Confidence            8999999987443  346788888888888654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.45  E-value=0.0037  Score=58.98  Aligned_cols=59  Identities=15%  Similarity=0.071  Sum_probs=45.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------CHhhhccCCCEEEEecCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~L~~~~~~ADIVIsAvG~p  286 (368)
                      -+.++|+|+|.|+++-+|+.++..|+++|++|+++.+...               .+.+.+...|+||..++..
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~   88 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM   88 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence            3578999999999999999999999999999999987641               2456778999999887743

>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A

Probab=96.45  E-value=0.15  Score=49.16  Aligned_cols=180  Identities=12%  Similarity=0.091  Sum_probs=114.6

Q ss_pred             EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679          106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL  182 (368)
Q Consensus       106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il  182 (368)
                      +....++- .|.-.+- -.=..++.++|.++.++.- .+.+   -|-+.+.++-|..- .+|+|.+--|  .|-..+.+.
T Consensus        37 k~la~lF~-e~STRTR-~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~-~~D~iviR~~--~~~~~~~la  110 (304)
T 3r7f_A           37 KFAANLFF-EPSTRTR-FSFEVAEKKLGMNVLNLDG-TSTSVQKGETLYDTIRTLESI-GVDVCVIRHS--EDEYYEELV  110 (304)
T ss_dssp             CEEEEEES-SCCSHHH-HHHHHHHHHTTCEEEEEET-TSTTSCSSSCHHHHHHHHHHH-TCCEEEEECS--STTCHHHHH
T ss_pred             CEEEEEec-CCChhHH-HhHHHHHHHCCCeEEEECc-ccccCCCCCCHHHHHHHHHHh-cCCEEEEecC--ChhHHHHHH
Confidence            34444453 3333333 3557889999999987743 2211   23355566655541 3689999877  334444444


Q ss_pred             hcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhCCCEE
Q 017679          183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATV  259 (368)
Q Consensus       183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~gAtV  259 (368)
                      +..       ++-.+|.|-      .+.+.||=+.+ ++.+.++.| .++|++|++||-+  +-|.+.++..+...|++|
T Consensus       111 ~~~-------~vPVINagd------g~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v  176 (304)
T 3r7f_A          111 SQV-------NIPILNAGD------GCGQHPTQSLLDLMTIYEEFN-TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARV  176 (304)
T ss_dssp             HHC-------SSCEEESCC------TTSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEE
T ss_pred             HhC-------CCCEEeCCC------CCCcCcHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEE
Confidence            332       133456421      24567998888 445555554 7999999999987  347999999999999999


Q ss_pred             EEEeCC-----------CCCHhhhccCCCEEEEecCCC----------C----c-ccCCCc---CCCcEEEEeec
Q 017679          260 SIVHAL-----------TKNPEQITSEADIVIAAAGVA----------N----L-VRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       260 ti~h~~-----------t~~L~~~~~~ADIVIsAvG~p----------~----~-I~~e~i---k~gavVIDvg~  305 (368)
                      +++.-.           +.++.+.+++||+|.+-....          .    + |+.+.+   +++++|.=++.
T Consensus       177 ~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHclP  251 (304)
T 3r7f_A          177 LFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPAP  251 (304)
T ss_dssp             EEESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECCSC
T ss_pred             EEECCCccCcchhhcCccCCHHHHhCCCCEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEECCCC
Confidence            998532           247788999999999864310          1    1 444433   57888876663

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.44  E-value=0.0041  Score=58.65  Aligned_cols=71  Identities=17%  Similarity=0.226  Sum_probs=53.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------------------------------CCH
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------------------------------KNP  269 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------------------------------~~L  269 (368)
                      ++|.|||.|.+ |.++|..|++.|.+|++++++.                                           .++
T Consensus        16 ~~I~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~   94 (302)
T 1f0y_A           16 KHVTVIGGGLM-GAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDA   94 (302)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCH
T ss_pred             CEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCH
Confidence            68999999875 9999999999999999997652                                           233


Q ss_pred             hhhccCCCEEEEecCCCC-----ccc--CCCcCCCcEEEEee
Q 017679          270 EQITSEADIVIAAAGVAN-----LVR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       270 ~~~~~~ADIVIsAvG~p~-----~I~--~e~ik~gavVIDvg  304 (368)
                      .+.+++||+||.++....     ++.  ...++++++|+...
T Consensus        95 ~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~t  136 (302)
T 1f0y_A           95 ASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNT  136 (302)
T ss_dssp             HHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECC
T ss_pred             HHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECC
Confidence            446789999999997532     111  23567888887643

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.44  E-value=0.0037  Score=53.11  Aligned_cols=38  Identities=18%  Similarity=0.176  Sum_probs=31.4

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -....+++|+|+|.|. +|+.++..|.+.|+.|+++.++
T Consensus        14 ~~~~~~~~v~IiG~G~-iG~~la~~L~~~g~~V~vid~~   51 (155)
T 2g1u_A           14 SKKQKSKYIVIFGCGR-LGSLIANLASSSGHSVVVVDKN   51 (155)
T ss_dssp             ---CCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESC
T ss_pred             hcccCCCcEEEECCCH-HHHHHHHHHHhCCCeEEEEECC
Confidence            3467889999999876 5999999999999999999764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.43  E-value=0.0057  Score=55.51  Aligned_cols=40  Identities=23%  Similarity=0.262  Sum_probs=35.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++..
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~   47 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS   47 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcH
Confidence            3578999999999999999999999999999999987643

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.43  E-value=0.0067  Score=56.87  Aligned_cols=40  Identities=18%  Similarity=0.229  Sum_probs=36.4

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +.+|+||.++|-|++.-+|+.+|..|+++||+|.++.++.
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~   41 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHA   41 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCc
Confidence            4679999999999988889999999999999999998764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.43  E-value=0.0053  Score=56.09  Aligned_cols=38  Identities=21%  Similarity=0.237  Sum_probs=34.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~   41 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP   41 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            57899999999988889999999999999999998764

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.42  E-value=0.0043  Score=62.82  Aligned_cols=74  Identities=23%  Similarity=0.266  Sum_probs=57.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------CCHhhhccCCCE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI  278 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------~~L~~~~~~ADI  278 (368)
                      -++.|||.|. +|.|+|..|++.|.+|++++++.                                  .++.+.+++||+
T Consensus         9 ~~~~vIGlG~-vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A            9 VRIAMIGTGY-VGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             eEEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            4789999986 59999999999999999997642                                  234467789999


Q ss_pred             EEEecCCCC----------ccc------CCCcCCCcEEEEeecCC
Q 017679          279 VIAAAGVAN----------LVR------GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       279 VIsAvG~p~----------~I~------~e~ik~gavVIDvg~n~  307 (368)
                      ||.+++.|.          ++.      ...+++|.+||+..+-+
T Consensus        88 vii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~  132 (446)
T 4a7p_A           88 VFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVP  132 (446)
T ss_dssp             EEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCC
T ss_pred             EEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence            999988773          121      13578899999987543

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=96.42  E-value=0.003  Score=64.09  Aligned_cols=73  Identities=21%  Similarity=0.275  Sum_probs=56.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------------CCHhhhccC---CCEEEEecCCCCc---
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQITSE---ADIVIAAAGVANL---  288 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------------~~L~~~~~~---ADIVIsAvG~p~~---  288 (368)
                      ++|.|||.|.+ |.+++..|.+.|.+|++++++.                  .++++.++.   +|+||.++..+..   
T Consensus         6 ~~IgvIG~G~m-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~   84 (474)
T 2iz1_A            6 ANFGVVGMAVM-GKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDA   84 (474)
T ss_dssp             BSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHH
T ss_pred             CcEEEEeeHHH-HHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHH
Confidence            57999999876 9999999999999999998752                  245555554   9999999987532   


Q ss_pred             -cc--CCCcCCCcEEEEeecC
Q 017679          289 -VR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 -I~--~e~ik~gavVIDvg~n  306 (368)
                       +.  ...+++|.+|||++..
T Consensus        85 vl~~l~~~l~~g~iiId~s~~  105 (474)
T 2iz1_A           85 TIKSLLPLLDIGDILIDGGNT  105 (474)
T ss_dssp             HHHHHGGGCCTTCEEEECSCC
T ss_pred             HHHHHHhhCCCCCEEEECCCC
Confidence             22  2467889999998844

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.41  E-value=0.0026  Score=52.83  Aligned_cols=54  Identities=15%  Similarity=0.066  Sum_probs=41.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------C---Hhh-hccCCCEEEEecCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------N---PEQ-ITSEADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------~---L~~-~~~~ADIVIsAvG~  285 (368)
                      ++++++|+|.|. +|+.++..|.++|..|+++.++..                  +   +.+ .+.++|+||.++|.
T Consensus         5 ~~~~v~I~G~G~-iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            5 GRYEYIVIGSEA-AGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             -CCSEEEECCSH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence            467999999987 599999999999999999977531                  1   111 14678999988884

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.40  E-value=0.0064  Score=55.54  Aligned_cols=60  Identities=25%  Similarity=0.321  Sum_probs=45.4

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------CCHhhh---ccCCCEEEEecCC
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQI---TSEADIVIAAAGV  285 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------~~L~~~---~~~ADIVIsAvG~  285 (368)
                      +..+++||+++|.|+++-+|+.++..|+++|++|+++.|+.                .++++.   +...|+||+.+|.
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~   91 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG   91 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence            34578999999999998899999999999999999987753                122222   2367888887774

>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}

Probab=96.39  E-value=0.047  Score=53.55  Aligned_cols=162  Identities=9%  Similarity=0.065  Sum_probs=105.6

Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceee
Q 017679          124 NKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG  200 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G  200 (368)
                      .=..++.++|.++.+..- .+.+   -|-+.+.++-|..-  +|+|.+--|-  |-....+.+..       ++-.+|.|
T Consensus        80 SFE~A~~~LGg~~i~l~~-~~ssl~kgEsl~DTarvLs~~--~D~IviR~~~--~~~~~~lA~~~-------~vPVINag  147 (339)
T 4a8t_A           80 SFETAMEQLGGHGEYLAP-GQIQLGGHETIEDTSRVLSRL--VDILMARVER--HHSIVDLANCA-------TIPVINGM  147 (339)
T ss_dssp             HHHHHHHHTTCEEEEECC-C-CCSSSSSCHHHHHHHHHHH--CSEEEEECSS--HHHHHHHHHHC-------SSCEEECC
T ss_pred             HHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CCEEEEecCc--HHHHHHHHHhC-------CCCEEECC
Confidence            456789999999987642 2211   23455666666654  7899987652  22222222222       23456653


Q ss_pred             eccccCCcCccccCCHHH-HHHHHHHh--CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------
Q 017679          201 NLAMRGREPLFIPCTPKG-CIELLIRS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------  266 (368)
Q Consensus       201 ~L~~g~~~~~~~PcTa~g-v~~lL~~~--~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------  266 (368)
                             .+.+.||=+.+ ++.+.++.  |..++|++|++||-++.|.+.++..|...|++|+++.-..           
T Consensus       148 -------~~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~  220 (339)
T 4a8t_A          148 -------SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKL  220 (339)
T ss_dssp             -------CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHH
T ss_pred             -------CCCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHH
Confidence                   24567998888 44454444  3379999999999998899999999999999999986332           


Q ss_pred             --------------CCHhhhccCCCEEEEec----CC-------------CCc-ccCCCc---CCCcEEEEeec
Q 017679          267 --------------KNPEQITSEADIVIAAA----GV-------------ANL-VRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       267 --------------~~L~~~~~~ADIVIsAv----G~-------------p~~-I~~e~i---k~gavVIDvg~  305 (368)
                                    .++. .+++||+|.+-+    |.             |.+ |+.+.+   +++++|.=++-
T Consensus       221 ~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcLP  293 (339)
T 4a8t_A          221 AKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLP  293 (339)
T ss_dssp             HHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSC
T ss_pred             HHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCC
Confidence                          3456 789999999743    32             112 444433   57888877764

>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A

Probab=96.38  E-value=0.14  Score=49.46  Aligned_cols=170  Identities=9%  Similarity=0.088  Sum_probs=109.3

Q ss_pred             cHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCcc
Q 017679          118 SQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF  194 (368)
Q Consensus       118 S~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl  194 (368)
                      |..=--.=..++.++|.++.++.-+.+.+   -|-+.+.++-|..-  +|+|.+--|-.  -....+.+..       ++
T Consensus        51 STRTR~SFe~A~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~~--~~~~~lA~~~-------~v  119 (306)
T 4ekn_B           51 STRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGY--ADIIVLRHPSE--GAARLASEYS-------QV  119 (306)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHH--CSEEEEECSST--THHHHHHHHC-------SS
T ss_pred             ChhHHhhHHHHHHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHh--CcEEEEEcCCh--HHHHHHHHhC-------CC
Confidence            43333355678999999987764212221   23355556555553  58999987643  3333333322       13


Q ss_pred             CcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhC-CCEEEEEeCC-----
Q 017679          195 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL-----  265 (368)
Q Consensus       195 ~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~-gAtVti~h~~-----  265 (368)
                      -.+|.|-      .+.+.||=+.+ ++.+.++.| .++|++|++||-+  +-|.+.++..+... |++|+++.-.     
T Consensus       120 PVINag~------g~~~HPtQ~LaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~  192 (306)
T 4ekn_B          120 PIINAGD------GSNQHPTQTLLDLYTIMREIG-RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLP  192 (306)
T ss_dssp             CEEESCS------SSSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCC
T ss_pred             CEEeCCC------CCCcCcHHHHHHHHHHHHHhC-CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccC
Confidence            4456421      24567998888 445555554 7999999999986  45799999999998 9999998532     


Q ss_pred             ----------------CCCHhhhccCCCEEEEecCC----C----------Cc-ccCCCcC-CCcEEEEeec
Q 017679          266 ----------------TKNPEQITSEADIVIAAAGV----A----------NL-VRGSWLK-PGAVVLDVGT  305 (368)
Q Consensus       266 ----------------t~~L~~~~~~ADIVIsAvG~----p----------~~-I~~e~ik-~gavVIDvg~  305 (368)
                                      +.++.+.+++||+|.+....    +          .+ |+.+.++ ++++|.=++-
T Consensus       193 ~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~q~er~~~~~e~~~~~~~y~v~~~~l~~~~ai~mH~lP  264 (306)
T 4ekn_B          193 KDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLP  264 (306)
T ss_dssp             HHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCCCGGGCCSHHHHHHHHHHHCBCHHHHTTCCCEEECCSC
T ss_pred             HHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCcccccCCCHHHHHHhccCcEECHHHHcCCCCEEECCCC
Confidence                            24777889999999976432    1          12 5555554 6777776664

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.38  E-value=0.006  Score=56.96  Aligned_cols=56  Identities=18%  Similarity=0.261  Sum_probs=46.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC------------------------HhhhccCCCEEEEecCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------------------------PEQITSEADIVIAAAGV  285 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~------------------------L~~~~~~ADIVIsAvG~  285 (368)
                      ++||.++|-|++.-+|+.++..|+++||+|.++.++.+.                        +.+...+-||+|+.+|.
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi   88 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI   88 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            589999999998888999999999999999999876421                        22445677999988874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.37  E-value=0.0036  Score=57.83  Aligned_cols=38  Identities=16%  Similarity=0.253  Sum_probs=33.6

Q ss_pred             CCCccceEEEEccC---ccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g---~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+||.++|.|++   ++ |+.+|..|+++||+|.++.++.
T Consensus         2 ~~l~gK~alVTGaa~~~GI-G~aiA~~la~~Ga~Vvi~~r~~   42 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSI-AFGVAKVLDQLGAKLVFTYRKE   42 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCH-HHHHHHHHHHTTCEEEEEESSG
T ss_pred             cCCCCCEEEEECCCCCchH-HHHHHHHHHHCCCEEEEEECCH
Confidence            46899999999975   55 9999999999999999998763

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=96.35  E-value=0.0022  Score=59.80  Aligned_cols=72  Identities=21%  Similarity=0.345  Sum_probs=54.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhC--CCEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCC---ccc-
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR-  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~---~I~-  290 (368)
                      ++|.|||.|.+ |.+++..|.+.  +.+|++++++.                .++.+.++++|+||.+++...   .+. 
T Consensus         7 ~~I~iIG~G~m-G~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~   85 (290)
T 3b1f_A            7 KTIYIAGLGLI-GASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIKI   85 (290)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHHHH
T ss_pred             ceEEEEeeCHH-HHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHHHH
Confidence            68999998876 99999999887  57999987642                244566789999999997432   222 


Q ss_pred             -CCC-cCCCcEEEEeec
Q 017679          291 -GSW-LKPGAVVLDVGT  305 (368)
Q Consensus       291 -~e~-ik~gavVIDvg~  305 (368)
                       ... ++++.+|+|++.
T Consensus        86 l~~~~l~~~~ivi~~~~  102 (290)
T 3b1f_A           86 LADLDLKEDVIITDAGS  102 (290)
T ss_dssp             HHTSCCCTTCEEECCCS
T ss_pred             HHhcCCCCCCEEEECCC
Confidence             245 788999999864

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.35  E-value=0.011  Score=60.44  Aligned_cols=76  Identities=28%  Similarity=0.256  Sum_probs=57.1

Q ss_pred             cceEEEEccCccchHHHHHHHhhC-CC-EEEEEeCCCC----C---H--------------------------------h
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALTK----N---P--------------------------------E  270 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~-gA-tVti~h~~t~----~---L--------------------------------~  270 (368)
                      -++|.|||.|. +|.++|..|++. |. +|+++.++..    .   +                                .
T Consensus        18 ~mkIaVIGlG~-mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~   96 (478)
T 3g79_A           18 IKKIGVLGMGY-VGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDF   96 (478)
T ss_dssp             CCEEEEECCST-THHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCG
T ss_pred             CCEEEEECcCH-HHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcH
Confidence            36899999987 599999999999 99 9999986543    0   0                                2


Q ss_pred             hhccCCCEEEEecCCCCccc-----------------CCCcCCCcEEEEeecCCC
Q 017679          271 QITSEADIVIAAAGVANLVR-----------------GSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       271 ~~~~~ADIVIsAvG~p~~I~-----------------~e~ik~gavVIDvg~n~~  308 (368)
                      +.+++||+||.+++.|.-..                 ...+++|++|||..+-+.
T Consensus        97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~p  151 (478)
T 3g79_A           97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITP  151 (478)
T ss_dssp             GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCT
T ss_pred             HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCCh
Confidence            34678999999999774211                 124678999999876543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.34  E-value=0.0036  Score=58.77  Aligned_cols=37  Identities=19%  Similarity=0.234  Sum_probs=34.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +|+||.++|-|+|.-+|+.+|..|+++||+|.+++++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~   40 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL   40 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC
Confidence            6899999999998888999999999999999999876

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.33  E-value=0.003  Score=60.66  Aligned_cols=95  Identities=19%  Similarity=0.151  Sum_probs=62.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------CHhh--
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NPEQ--  271 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------~L~~--  271 (368)
                      +||....++..|.+..---.|++|+|+|+++.+|..+++++...|++|+++.+...                  ++.+  
T Consensus       140 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v  219 (342)
T 4eye_A          140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAV  219 (342)
T ss_dssp             HTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHH
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHH
Confidence            34544555566644433347999999999666799999999999999988876432                  1211  


Q ss_pred             --hc--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          272 --IT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 --~~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                        .+  +.+|+||.++|.+.+ -.-+.++++-.++.+|..
T Consensus       220 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~  259 (342)
T 4eye_A          220 REATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFA  259 (342)
T ss_dssp             HHHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC---
T ss_pred             HHHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEcc
Confidence              12  248999999998644 234567888888888864

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.32  E-value=0.007  Score=56.00  Aligned_cols=40  Identities=30%  Similarity=0.369  Sum_probs=35.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++..
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~   46 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPET   46 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            4689999999999888899999999999999999987653

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=96.32  E-value=0.0021  Score=61.68  Aligned_cols=71  Identities=17%  Similarity=0.169  Sum_probs=52.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCCcc
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAGVANLV  289 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~~I  289 (368)
                      .-|+|.|||.|.+ |.++|..|+ .|.+|++.+++.                     .++.+ +++||+||.+++...-+
T Consensus        11 ~~~~V~vIG~G~M-G~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v   87 (293)
T 1zej_A           11 HHMKVFVIGAGLM-GRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT   87 (293)
T ss_dssp             -CCEEEEECCSHH-HHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred             CCCeEEEEeeCHH-HHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence            4689999999876 999999999 999999998753                     23333 78999999999854322


Q ss_pred             cC------CCcCCCcEEE-Eeec
Q 017679          290 RG------SWLKPGAVVL-DVGT  305 (368)
Q Consensus       290 ~~------e~ik~gavVI-Dvg~  305 (368)
                      +.      +-+ +|++++ |.++
T Consensus        88 k~~l~~~l~~~-~~~IlasntSt  109 (293)
T 1zej_A           88 KVEVLREVERL-TNAPLCSNTSV  109 (293)
T ss_dssp             HHHHHHHHHTT-CCSCEEECCSS
T ss_pred             HHHHHHHHhcC-CCCEEEEECCC
Confidence            21      223 888775 4543

>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1

Probab=96.31  E-value=0.11  Score=50.58  Aligned_cols=169  Identities=15%  Similarity=0.099  Sum_probs=109.7

Q ss_pred             ccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCc
Q 017679          117 DSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG  193 (368)
Q Consensus       117 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDg  193 (368)
                      .|..---.=..++.++|.++.++.- .+.+   -|-+.+.++-|+.-  +|+|.+--|-  +-....+.+..       +
T Consensus        68 pSTRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~--~D~iviR~~~--~~~~~~lA~~~-------~  135 (325)
T 1vlv_A           68 RSTRTRLAFETAFAEEGGHPIFLSP-NDIHLGAKESLEDTARVLGRM--VDAIMFRGYK--QETVEKLAEYS-------G  135 (325)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECT-TTCCTTTSSCHHHHHHHHHTT--CSEEEEESSC--HHHHHHHHHHH-------C
T ss_pred             CCcchHHHHHHHHHHcCCeEEEECC-ccccCCCCcCHHHHHHHHHHh--CCEEEEECCC--hHHHHHHHHhC-------C
Confidence            3433334567889999999887753 2221   23467777777764  6899998662  22222222221       2


Q ss_pred             cCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC------
Q 017679          194 FHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------  265 (368)
Q Consensus       194 l~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~------  265 (368)
                      +-.+|.|       .+...||=+.+ ++.+.++. ..++|++|+++|-+ +-|.+.++..|...|++|+++.-.      
T Consensus       136 vPVINa~-------~~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~  207 (325)
T 1vlv_A          136 VPVYNGL-------TDEFHPTQALADLMTIEENF-GRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRS  207 (325)
T ss_dssp             SCEEESC-------CSSCCHHHHHHHHHHHHHHH-SCSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCH
T ss_pred             CCEEeCC-------CCCCCcHHHHHHHHHHHHHh-CCcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCH
Confidence            3455632       23567998888 44444444 48999999999997 667999999999999999998532      


Q ss_pred             -------------------CCCHhhhccCCCEEEEec----CC----C-------Cc-ccCCCc----CCCcEEEEeec
Q 017679          266 -------------------TKNPEQITSEADIVIAAA----GV----A-------NL-VRGSWL----KPGAVVLDVGT  305 (368)
Q Consensus       266 -------------------t~~L~~~~~~ADIVIsAv----G~----p-------~~-I~~e~i----k~gavVIDvg~  305 (368)
                                         +.++.+.+++||+|.+-.    |.    +       .+ |+.+.+    +++++|.=++.
T Consensus       208 ~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP  286 (325)
T 1vlv_A          208 DVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLP  286 (325)
T ss_dssp             HHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred             HHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCC
Confidence                               246778899999999733    21    1       12 455544    67777777663

>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A

Probab=96.30  E-value=0.048  Score=52.74  Aligned_cols=141  Identities=11%  Similarity=0.110  Sum_probs=94.7

Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceee
Q 017679          124 NKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG  200 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G  200 (368)
                      .=..++.++|.++.++.-. +.+   -|-+.+.++-|+.-  +|+|.+--|-  |-....+.+..       ++-.+|.|
T Consensus        56 SFe~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~lA~~~-------~vPVINa~  123 (307)
T 2i6u_A           56 SFELGIAQLGGHAVVVDSG-STQLGRDETLQDTAKVLSRY--VDAIVWRTFG--QERLDAMASVA-------TVPVINAL  123 (307)
T ss_dssp             HHHHHHHHTTCEEEEEEGG-GSGGGGTCCHHHHHHHHHHH--EEEEEEECSS--HHHHHHHHHHC-------SSCEEESC
T ss_pred             HHHHHHHHcCCeEEEECCc-cccCCCCCCHHHHHHHHHHh--CCEEEEecCC--hhHHHHHHhhC-------CCCEEcCC
Confidence            5578899999999887632 211   12355666666553  6788887652  22222222221       24456642


Q ss_pred             eccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC--------------
Q 017679          201 NLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL--------------  265 (368)
Q Consensus       201 ~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~--------------  265 (368)
                             .+...||=+.+=+--++++...++|++|++||-+ +-|.+.++..|...|++|+++.-.              
T Consensus       124 -------~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~  196 (307)
T 2i6u_A          124 -------SDEFHPCQVLADLQTIAERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAER  196 (307)
T ss_dssp             -------CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHH
T ss_pred             -------CCCcCccHHHHHHHHHHHHhCCcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHH
Confidence                   2456799888844444444458999999999997 677999999999999999998632              


Q ss_pred             -----------CCCHhhhccCCCEEEEec
Q 017679          266 -----------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       266 -----------t~~L~~~~~~ADIVIsAv  283 (368)
                                 +.++.+.+++||+|.+-.
T Consensus       197 ~a~~~G~~~~~~~d~~eav~~aDvvy~~~  225 (307)
T 2i6u_A          197 RAQDTGASVTVTADAHAAAAGADVLVTDT  225 (307)
T ss_dssp             HHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred             HHHHcCCeEEEEECHHHHhcCCCEEEecc
Confidence                       245678899999999743

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.30  E-value=0.0038  Score=55.22  Aligned_cols=53  Identities=26%  Similarity=0.208  Sum_probs=45.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~~~~ADIVIsAvG~  285 (368)
                      ++|+|.|+++-+|+.++..|+++|++|+++.|...                    ++.+.++..|+||.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence            78999999999999999999999999999987631                    245677889999988874

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.29  E-value=0.0065  Score=57.26  Aligned_cols=58  Identities=9%  Similarity=0.056  Sum_probs=47.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------CHhhhcc--CCCEEEEe
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQITS--EADIVIAA  282 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------~L~~~~~--~ADIVIsA  282 (368)
                      .+++|++|+|.|+++-+|+.++..|+++|++|+++.+...                       ++.+.++  ..|+||..
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~   95 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS   95 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence            3678999999999888999999999999999999887421                       1334555  88999988


Q ss_pred             cCC
Q 017679          283 AGV  285 (368)
Q Consensus       283 vG~  285 (368)
                      +|.
T Consensus        96 A~~   98 (330)
T 2pzm_A           96 AAA   98 (330)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            874

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.29  E-value=0.0032  Score=61.69  Aligned_cols=72  Identities=8%  Similarity=0.074  Sum_probs=56.1

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------CCHhhhccCCCEEEEec
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------~~L~~~~~~ADIVIsAv  283 (368)
                      .++|.|||.|.. |.+++..|++.|.+|+++.++.                            .++.+.+++||+||.++
T Consensus        29 ~mkI~VIGaG~m-G~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV  107 (356)
T 3k96_A           29 KHPIAILGAGSW-GTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV  107 (356)
T ss_dssp             CSCEEEECCSHH-HHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred             CCeEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence            468999999875 9999999999999999997641                            25567788999999999


Q ss_pred             CCCCc---cc--CCCcCCCcEEEEee
Q 017679          284 GVANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       284 G~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      +...+   +.  ...++++.+||++.
T Consensus       108 p~~~~~~vl~~i~~~l~~~~ivvs~~  133 (356)
T 3k96_A          108 PSFAFHEVITRMKPLIDAKTRIAWGT  133 (356)
T ss_dssp             CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            75321   21  24578899999874

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.29  E-value=0.0025  Score=60.64  Aligned_cols=95  Identities=13%  Similarity=0.043  Sum_probs=66.9

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhh-
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI-  272 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~-  272 (368)
                      ||.+..+...+.+..---.|++|+|+|+++.+|..+++++...|++|+++.+..                   .++.+. 
T Consensus       122 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~  201 (325)
T 3jyn_A          122 MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRV  201 (325)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred             hhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence            555556666665543334699999999766679999999999999998876542                   222222 


Q ss_pred             ---c--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecCC
Q 017679          273 ---T--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       273 ---~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~  307 (368)
                         +  +..|+||.++|.+.+ -.-+.++++-.++.+|...
T Consensus       202 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~  242 (325)
T 3jyn_A          202 LELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNAS  242 (325)
T ss_dssp             HHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCTT
T ss_pred             HHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEecCC
Confidence               2  258999999997443 2346788888888998653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.29  E-value=0.0059  Score=54.97  Aligned_cols=37  Identities=30%  Similarity=0.452  Sum_probs=34.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~   40 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRK   40 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCC
Confidence            4689999999999889999999999999999999887

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.29  E-value=0.007  Score=57.14  Aligned_cols=68  Identities=16%  Similarity=0.135  Sum_probs=52.1

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------------
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------  267 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------------  267 (368)
                      |.++.-+...+     .+++|+|+|.|++|.+|+.++..|+++|.+|+++.+...                         
T Consensus        11 ~~~~~~~~~~~-----~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (351)
T 3ruf_A           11 MSRYEEITQQL-----IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE   85 (351)
T ss_dssp             CHHHHHHHHHH-----HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEE
T ss_pred             HHHHhhHHhhC-----CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEE
Confidence            44445544433     257899999999999999999999999999999987421                         


Q ss_pred             -------CHhhhccCCCEEEEecCC
Q 017679          268 -------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       268 -------~L~~~~~~ADIVIsAvG~  285 (368)
                             ++.+.++.+|+||.++|.
T Consensus        86 ~Dl~d~~~~~~~~~~~d~Vih~A~~  110 (351)
T 3ruf_A           86 GDIRDLTTCEQVMKGVDHVLHQAAL  110 (351)
T ss_dssp             CCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             ccCCCHHHHHHHhcCCCEEEECCcc
Confidence                   134567789999988874

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.28  E-value=0.004  Score=55.16  Aligned_cols=55  Identities=15%  Similarity=0.161  Sum_probs=44.7

Q ss_pred             cceEEEEccCccchHHHHHHHh-hCCCEEEEEeCCCC------------------------CHhhhccCCCEEEEecCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALTK------------------------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~-~~gAtVti~h~~t~------------------------~L~~~~~~ADIVIsAvG~p  286 (368)
                      .|+|+|.|+++-+|+.++..|+ ++|++|+++.|+..                        ++.+.++.+|+||+++|..
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            3679999998888999999999 89999999877532                        1345677899999988864

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.28  E-value=0.0073  Score=58.81  Aligned_cols=93  Identities=16%  Similarity=0.105  Sum_probs=65.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC--------------------Hhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------------PEQ  271 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~--------------------L~~  271 (368)
                      +||....++..|++.++ -.|.+|+|+|+|. ||..+++++...|++|+.+.+....                    .++
T Consensus       176 l~~~~~tA~~al~~~~~-~~g~~VlV~GaG~-vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  253 (369)
T 1uuf_A          176 LLCAGITTYSPLRHWQA-GPGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAA  253 (369)
T ss_dssp             GGTHHHHHHHHHHHTTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHT
T ss_pred             hhhhHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHH
Confidence            45555555666666543 3699999999976 6999999999999998877654321                    112


Q ss_pred             hccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          272 ITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      ....+|+||.++|.+..+  --+.++++-.++.+|..
T Consensus       254 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~  290 (369)
T 1uuf_A          254 HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAP  290 (369)
T ss_dssp             TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC
T ss_pred             hhcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccC
Confidence            224579999999987543  24678888788888864

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.28  E-value=0.0054  Score=61.29  Aligned_cols=73  Identities=14%  Similarity=0.152  Sum_probs=54.8

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------CCHhhhccCCCEE
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADIV  279 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------~~L~~~~~~ADIV  279 (368)
                      +|.|||.|.+ |.++|..|++.|.+|+++.++.                                  .++.+.+++||+|
T Consensus         2 kI~VIG~G~v-G~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv   80 (436)
T 1mv8_A            2 RISIFGLGYV-GAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS   80 (436)
T ss_dssp             EEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred             EEEEECCCHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence            6899998875 9999999999999999997641                                  1233457789999


Q ss_pred             EEecCCCCc---------cc------CCCcCC---CcEEEEeecCC
Q 017679          280 IAAAGVANL---------VR------GSWLKP---GAVVLDVGTCP  307 (368)
Q Consensus       280 IsAvG~p~~---------I~------~e~ik~---gavVIDvg~n~  307 (368)
                      |.+++.|.-         +.      ...+++   |.+||+.+..+
T Consensus        81 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~  126 (436)
T 1mv8_A           81 FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVL  126 (436)
T ss_dssp             EECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCC
T ss_pred             EEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcC
Confidence            999987652         11      124577   89999876544

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.28  E-value=0.0032  Score=58.62  Aligned_cols=71  Identities=18%  Similarity=0.351  Sum_probs=52.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------------CHhhhcc---CCCEEEEec
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------NPEQITS---EADIVIAAA  283 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------------~L~~~~~---~ADIVIsAv  283 (368)
                      .+|.|||.|.+ |.+++..|.+.|.+|+++.++..                          +..+...   ++|+||.++
T Consensus         4 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v   82 (316)
T 2ew2_A            4 MKIAIAGAGAM-GSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT   82 (316)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred             CeEEEECcCHH-HHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence            47999999875 99999999999999999987521                          1112233   899999999


Q ss_pred             CCCCc---cc--CCCcCCCcEEEEee
Q 017679          284 GVANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       284 G~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      +....   +.  ...++++.+|||+.
T Consensus        83 ~~~~~~~v~~~l~~~l~~~~~iv~~~  108 (316)
T 2ew2_A           83 KAQQLDAMFKAIQPMITEKTYVLCLL  108 (316)
T ss_dssp             CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred             ccccHHHHHHHHHHhcCCCCEEEEec
Confidence            75321   11  23567899999985

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.26  E-value=0.0042  Score=58.54  Aligned_cols=70  Identities=16%  Similarity=0.205  Sum_probs=53.0

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCccc---
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNPEQITSEADIVIAAAGVANLVR---  290 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~I~---  290 (368)
                      .+++.|||.|.+ |..++..|.+.|.   .|++++++.               .+..+.+++||+||.++. |..+.   
T Consensus         3 ~~~I~iIG~G~m-G~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~-p~~~~~vl   80 (280)
T 3tri_A            3 TSNITFIGGGNM-ARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVK-PHQIKMVC   80 (280)
T ss_dssp             CSCEEEESCSHH-HHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSC-GGGHHHHH
T ss_pred             CCEEEEEcccHH-HHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeC-HHHHHHHH
Confidence            478999999886 9999999999987   899998763               255677899999999994 43221   


Q ss_pred             ---CCC-cCCCcEEEEe
Q 017679          291 ---GSW-LKPGAVVLDV  303 (368)
Q Consensus       291 ---~e~-ik~gavVIDv  303 (368)
                         .+. ++++.+||.+
T Consensus        81 ~~l~~~~l~~~~iiiS~   97 (280)
T 3tri_A           81 EELKDILSETKILVISL   97 (280)
T ss_dssp             HHHHHHHHTTTCEEEEC
T ss_pred             HHHHhhccCCCeEEEEe
Confidence               123 5677677654

>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}

Probab=96.25  E-value=0.04  Score=54.46  Aligned_cols=169  Identities=12%  Similarity=0.056  Sum_probs=110.7

Q ss_pred             ccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCc
Q 017679          117 DSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG  193 (368)
Q Consensus       117 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDg  193 (368)
                      .|..---.=..++.++|.++.++.-. +.+   -|-+.+.++-|..-  +|+|.+--|  .+-....+.+..       +
T Consensus        77 ~STRTR~SFE~A~~~LGg~vi~l~~~-~ss~~kgEsl~DTarvLs~~--~D~IviR~~--~~~~~~~lA~~s-------~  144 (359)
T 2w37_A           77 SSTRTRSAFTTASIDLGAHPEYLGQN-DIQLGKKESTSDTAKVLGSM--FDGIEFRGF--KQSDAEILARDS-------G  144 (359)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTT-TCCTTTSSCHHHHHHHHHHH--CSEEEEESS--CHHHHHHHHHHS-------S
T ss_pred             CCccHHHHHHHHHHHcCCeEEEeCCc-cccCCCCcCHHHHHHHHHHh--cCEEEEecC--ChHHHHHHHHhC-------C
Confidence            34433345678899999999877532 211   23455666666553  688998765  222222222221       2


Q ss_pred             cCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC------
Q 017679          194 FHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------  265 (368)
Q Consensus       194 l~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~------  265 (368)
                      +-.+|.|       .+.+.||=+.+ ++.+.++.| .++|.+++++|-+ +.|.+.++..|...|++|+++.-.      
T Consensus       145 vPVINa~-------~~~~HPtQaLaDl~Ti~E~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~  216 (359)
T 2w37_A          145 VPVWNGL-------TDEWHPTQMLADFMTVKENFG-KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTE  216 (359)
T ss_dssp             SCEEEEE-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCH
T ss_pred             CCEEcCC-------CCCCCccHHHHHHHHHHHHhC-CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCH
Confidence            4556743       24567998888 555555554 8999999999997 668999999999999999998532      


Q ss_pred             -------------------CCCHhhhccCCCEEEEec----CCC-----------CcccCCCc---C---CCcEEEEeec
Q 017679          266 -------------------TKNPEQITSEADIVIAAA----GVA-----------NLVRGSWL---K---PGAVVLDVGT  305 (368)
Q Consensus       266 -------------------t~~L~~~~~~ADIVIsAv----G~p-----------~~I~~e~i---k---~gavVIDvg~  305 (368)
                                         +.++.+.++.||+|.+-+    |..           .-|+.+.+   +   ++++|.=++-
T Consensus       217 ~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP  296 (359)
T 2w37_A          217 ETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLP  296 (359)
T ss_dssp             HHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSC
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCC
Confidence                               346778899999999643    421           12555544   5   6788877764

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=96.25  E-value=0.0068  Score=57.99  Aligned_cols=70  Identities=19%  Similarity=0.224  Sum_probs=52.5

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------------CCHhhhccCCCEEEEecCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      .-++.|||.|.+ |.+++..|++.|.+|++++++.                         .+..+ +..+|+||.++...
T Consensus        14 ~~kI~iIG~G~m-G~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~~   91 (335)
T 1z82_A           14 EMRFFVLGAGSW-GTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPVQ   91 (335)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCGG
T ss_pred             CCcEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCHH
Confidence            357999999876 9999999999999999998752                         12334 67899999999753


Q ss_pred             Cc--ccCCCcC-CCcEEEEee
Q 017679          287 NL--VRGSWLK-PGAVVLDVG  304 (368)
Q Consensus       287 ~~--I~~e~ik-~gavVIDvg  304 (368)
                      .+  +- +.++ ++.+||++.
T Consensus        92 ~~~~v~-~~l~~~~~~vv~~~  111 (335)
T 1z82_A           92 YIREHL-LRLPVKPSMVLNLS  111 (335)
T ss_dssp             GHHHHH-TTCSSCCSEEEECC
T ss_pred             HHHHHH-HHhCcCCCEEEEEe
Confidence            32  11 1133 788999986

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.21  E-value=0.0074  Score=57.49  Aligned_cols=70  Identities=16%  Similarity=0.189  Sum_probs=53.1

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------------------CCHhhhccCCCEEEEec
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------------------~~L~~~~~~ADIVIsAv  283 (368)
                      ++|.|||.|.+ |..++..|.+.|.+|+++.++.                             .++.+.+.++|+||.++
T Consensus         5 mki~iiG~G~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   83 (359)
T 1bg6_A            5 KTYAVLGLGNG-GHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   83 (359)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CeEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence            58999999875 9999999999999999997641                             13445577899999999


Q ss_pred             CCCCc---cc--CCCcCCCcEEEEe
Q 017679          284 GVANL---VR--GSWLKPGAVVLDV  303 (368)
Q Consensus       284 G~p~~---I~--~e~ik~gavVIDv  303 (368)
                      +....   +.  ...++++.+||++
T Consensus        84 ~~~~~~~~~~~l~~~l~~~~~vv~~  108 (359)
T 1bg6_A           84 PAIHHASIAANIASYISEGQLIILN  108 (359)
T ss_dssp             CGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             CchHHHHHHHHHHHhCCCCCEEEEc
Confidence            86442   21  2346778888877

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.20  E-value=0.0055  Score=54.51  Aligned_cols=56  Identities=11%  Similarity=-0.004  Sum_probs=46.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhC--CCEEEEEeCCC--------------------CCHhhhccCCCEEEEecCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT--------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      .++|+|+|.|+++-+|+.++..|+++  |++|+++.|+.                    .++.+.++..|+||.++|.
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            46899999999999999999999999  89999988752                    1244667789999988874

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.20  E-value=0.0028  Score=55.03  Aligned_cols=58  Identities=16%  Similarity=0.130  Sum_probs=45.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCC------------------C---Hhhh--ccCCCEEEEec
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK------------------N---PEQI--TSEADIVIAAA  283 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~------------------~---L~~~--~~~ADIVIsAv  283 (368)
                      .++.+++++|+|.|.+ |+.++..|.+. |..|+++.++..                  +   +.+.  +.+||+||.++
T Consensus        35 ~~~~~~~v~IiG~G~~-G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~  113 (183)
T 3c85_A           35 INPGHAQVLILGMGRI-GTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM  113 (183)
T ss_dssp             BCCTTCSEEEECCSHH-HHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred             cCCCCCcEEEECCCHH-HHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence            4577889999998775 99999999998 999999976521                  1   2333  67789999888


Q ss_pred             CCC
Q 017679          284 GVA  286 (368)
Q Consensus       284 G~p  286 (368)
                      +.+
T Consensus       114 ~~~  116 (183)
T 3c85_A          114 PHH  116 (183)
T ss_dssp             SSH
T ss_pred             CCh
Confidence            754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.20  E-value=0.0041  Score=58.43  Aligned_cols=92  Identities=13%  Similarity=0.129  Sum_probs=61.5

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC--------------------Hhhh
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------------PEQI  272 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~--------------------L~~~  272 (368)
                      ||....++..|.+.. --.|++|+|+|+++.+|..+++++...|++|+.+.++...                    +.+.
T Consensus       108 ~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~  186 (302)
T 1iz0_A          108 PVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKA  186 (302)
T ss_dssp             HHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHH
T ss_pred             hhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHH
Confidence            444444555565555 4479999999996667999999999999999888764321                    1122


Q ss_pred             ccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          273 TSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      +..+|+||. +|.+.+ -.-+.++++..++.+|..
T Consensus       187 ~~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~  220 (302)
T 1iz0_A          187 WGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAA  220 (302)
T ss_dssp             TTSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC---
T ss_pred             hcCceEEEE-CCHHHHHHHHHhhccCCEEEEEeCC
Confidence            246799999 887433 123567777778888864

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.20  E-value=0.0025  Score=60.78  Aligned_cols=94  Identities=16%  Similarity=0.126  Sum_probs=65.2

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhh-
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI-  272 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~-  272 (368)
                      +|.+..++..+.+..---.|++|+|+|+++.+|..+++++...|++|+++.++.                   .++.+. 
T Consensus       130 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~  209 (334)
T 3qwb_A          130 LLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQV  209 (334)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHH
T ss_pred             hhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHH
Confidence            444455555565543335799999999666679999999999999998887642                   222222 


Q ss_pred             ---c--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          273 ---T--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ---~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                         +  ...|+||.++|.+.+ ---+.++++-.++.+|..
T Consensus       210 ~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~  249 (334)
T 3qwb_A          210 LKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNA  249 (334)
T ss_dssp             HHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEECCCT
T ss_pred             HHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEEEcCC
Confidence               2  247999999987433 233577888888889864

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=96.19  E-value=0.0062  Score=56.06  Aligned_cols=70  Identities=14%  Similarity=0.136  Sum_probs=53.0

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------HhhhccCCCEEEEecCCCCc---c
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQITSEADIVIAAAGVANL---V  289 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~~~~~~ADIVIsAvG~p~~---I  289 (368)
                      +|.|||.|.+ |.+++..|.+.|.+|+++++....                     ..+.++++|+||.+++...+   +
T Consensus         2 ~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~   80 (291)
T 1ks9_A            2 KITVLGCGAL-GQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAV   80 (291)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHH
T ss_pred             eEEEECcCHH-HHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhHHHHH
Confidence            6999999875 999999999999999999765321                     12345689999999986542   1


Q ss_pred             c--CCCcCCCcEEEEee
Q 017679          290 R--GSWLKPGAVVLDVG  304 (368)
Q Consensus       290 ~--~e~ik~gavVIDvg  304 (368)
                      .  ...++++.+|||+.
T Consensus        81 ~~l~~~l~~~~~vv~~~   97 (291)
T 1ks9_A           81 KSLASTLPVTTPILLIH   97 (291)
T ss_dssp             HHHHTTSCTTSCEEEEC
T ss_pred             HHHHhhCCCCCEEEEec
Confidence            1  23567888999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.17  E-value=0.0036  Score=59.65  Aligned_cols=96  Identities=15%  Similarity=0.096  Sum_probs=65.5

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQ  271 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~  271 (368)
                      +||....++..|.+..---.|++|+|+|+++.+|..++.++...|++|+.+.+...                    ++.+
T Consensus       130 l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  209 (336)
T 4b7c_A          130 LGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAA  209 (336)
T ss_dssp             TSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHH
T ss_pred             cccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHH
Confidence            35555556666644433357999999999666799999999999999988875421                    1211


Q ss_pred             hc-----cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecCC
Q 017679          272 IT-----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       272 ~~-----~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~  307 (368)
                      .+     ...|+||.++|.+.+ -.-+.++++-.++.+|...
T Consensus       210 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          210 GLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             HHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGG
T ss_pred             HHHHhcCCCceEEEECCCcchHHHHHHHHhhCCEEEEEeecc
Confidence            11     237888888886433 2345778888888888643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.16  E-value=0.0034  Score=57.73  Aligned_cols=55  Identities=13%  Similarity=0.143  Sum_probs=46.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------CHhhhccCCCEEEEecCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------~L~~~~~~ADIVIsAvG~  285 (368)
                      ++|+|+|.|+++-+|+.++..|+++|++|+++.+...                  ++.+.+++.|+||..+|.
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~   74 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGI   74 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence            5789999999888999999999999999999887531                  244667889999988875

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=96.16  E-value=0.0069  Score=56.43  Aligned_cols=58  Identities=10%  Similarity=0.132  Sum_probs=45.9

Q ss_pred             ccceEEEEcc----------------CccchHHHHHHHhhCCCEEEEEeCCCC----------------------CHhhh
Q 017679          231 MGKNAVVIGR----------------SNIVGLPTSLLLQRHHATVSIVHALTK----------------------NPEQI  272 (368)
Q Consensus       231 ~GK~VvVIG~----------------g~~VGrpla~lL~~~gAtVti~h~~t~----------------------~L~~~  272 (368)
                      +||+|+|-|.                ||-.|..+|..|.++||.|+++++.+.                      .+.+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~   81 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQER   81 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHh
Confidence            5899999988                675699999999999999999998532                      01234


Q ss_pred             ccCCCEEEEecCCCCc
Q 017679          273 TSEADIVIAAAGVANL  288 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~  288 (368)
                      ...+|++|.+++...+
T Consensus        82 ~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           82 VQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             GGGCSEEEECSBCCSE
T ss_pred             cCCCCEEEEcCccccc
Confidence            5689999999886654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.15  E-value=0.0041  Score=59.00  Aligned_cols=94  Identities=19%  Similarity=0.166  Sum_probs=64.9

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC------------------CCC-Hhhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL------------------TKN-PEQI  272 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~------------------t~~-L~~~  272 (368)
                      +||....++..|+..++ -.|.+|+|+|+++.||..+++++...|++|+.+.+.                  ..+ +.+.
T Consensus       134 l~~~~~ta~~al~~~~~-~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~  212 (321)
T 3tqh_A          134 LPTAGLTALQALNQAEV-KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAI  212 (321)
T ss_dssp             SHHHHHHHHHHHHHTTC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHC
T ss_pred             hhhHHHHHHHHHHhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhh
Confidence            35544445555544433 479999999866667999999999999988765432                  234 5566


Q ss_pred             ccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          273 TSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      ++.+|+||.++|.+.+ -.-+.++++-.++.+|..
T Consensus       213 ~~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~  247 (321)
T 3tqh_A          213 STPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTI  247 (321)
T ss_dssp             CSCEEEEEESSCHHHHHHHGGGEEEEEEEEECCST
T ss_pred             ccCCCEEEECCCcHHHHHHHHhccCCCEEEEeCCC
Confidence            6778999999987654 234567787777777743

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.15  E-value=0.0053  Score=54.32  Aligned_cols=53  Identities=13%  Similarity=0.145  Sum_probs=43.4

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhhccCCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~~~~ADIVIsAvG~p  286 (368)
                      +|+|.|+++-+|+.++..|+++|++|+++.|...                    ++.+.+++.|+||..+|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence            6999999999999999999999999999987631                    2345567789999888753

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.14  E-value=0.0086  Score=57.39  Aligned_cols=94  Identities=13%  Similarity=0.088  Sum_probs=65.3

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQ  271 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~  271 (368)
                      +||....++..|++.++ -.|++|+|+|+++.+|..++.++...|++|+++.+...                    ++.+
T Consensus       151 l~~~~~ta~~~l~~~~~-~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~  229 (347)
T 2hcy_A          151 ILCAGITVYKALKSANL-MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVG  229 (347)
T ss_dssp             GGTHHHHHHHHHHTTTC-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHH
T ss_pred             HhhhHHHHHHHHHhcCC-CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHH
Confidence            45554545566665533 36999999999666799999999999999988865421                    2222


Q ss_pred             hcc-----CCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          272 ITS-----EADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~~~-----~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      .++     ..|+||.++|.+..+  --+.++++..++.+|..
T Consensus       230 ~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~  271 (347)
T 2hcy_A          230 AVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMP  271 (347)
T ss_dssp             HHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCC
T ss_pred             HHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence            222     479999999875443  24567787788888864

>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*

Probab=96.14  E-value=0.027  Score=55.14  Aligned_cols=163  Identities=13%  Similarity=0.061  Sum_probs=109.7

Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceee
Q 017679          124 NKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG  200 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G  200 (368)
                      .=..++.++|.++.++.- .+.+   -|-+.+.++-|..-  +|+|.+--|-  |-....+.++.       ++-.+|.|
T Consensus        61 SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~--~~~~~~lA~~~-------~vPVINa~  128 (333)
T 1duv_G           61 SFEVAAYDQGARVTYLGP-SGSQIGHKESIKDTARVLGRM--YDGIQYRGYG--QEIVETLAEYA-------SVPVWNGL  128 (333)
T ss_dssp             HHHHHHHHTTCEEEEECS-SSSCBTTTBCHHHHHHHHTTT--CSEEEEECSC--HHHHHHHHHHH-------SSCEEESC
T ss_pred             HHHHHHHHcCCeEEEECC-ccccCcCCCcHHHHHHHHHHh--CCEEEEEcCC--chHHHHHHHhC-------CCCeEcCC
Confidence            557789999999987752 2211   24477777777764  6899988652  22222222221       24455632


Q ss_pred             eccccCCcCccccCCHHH-HHHHHHH-hCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC------------
Q 017679          201 NLAMRGREPLFIPCTPKG-CIELLIR-SGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------------  265 (368)
Q Consensus       201 ~L~~g~~~~~~~PcTa~g-v~~lL~~-~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~------------  265 (368)
                             .+.+.||=+.+ ++.+.++ .|..++|.++++||-+ +.|++.++..|...|++|+++.-.            
T Consensus       129 -------~~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~  201 (333)
T 1duv_G          129 -------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTEC  201 (333)
T ss_dssp             -------CSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHH
T ss_pred             -------CCCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHH
Confidence                   35567998888 4455454 4448999999999987 667999999999999999998532            


Q ss_pred             -------------CCCHhhhccCCCEEEEec----CC-------------CCcccCCCc----CCCcEEEEeec
Q 017679          266 -------------TKNPEQITSEADIVIAAA----GV-------------ANLVRGSWL----KPGAVVLDVGT  305 (368)
Q Consensus       266 -------------t~~L~~~~~~ADIVIsAv----G~-------------p~~I~~e~i----k~gavVIDvg~  305 (368)
                                   +.++.+.+++||+|.+-+    |.             +.-|+.+.+    +|+++|.=++.
T Consensus       202 ~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP  275 (333)
T 1duv_G          202 RALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLP  275 (333)
T ss_dssp             HHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred             HHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCC
Confidence                         346778899999999733    32             112555554    67788877764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.14  E-value=0.0047  Score=55.62  Aligned_cols=57  Identities=16%  Similarity=0.132  Sum_probs=46.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC---------------------CHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~p~  287 (368)
                      ..|+|+|.|+++-+|+.++..|+++| ++|+++.|...                     ++.+.++.+|+||.++|.+.
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~  100 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED  100 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence            46899999998888999999999999 89999887531                     24466788999998887654

>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A

Probab=96.14  E-value=0.046  Score=53.92  Aligned_cols=162  Identities=9%  Similarity=0.048  Sum_probs=108.4

Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceee
Q 017679          124 NKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG  200 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G  200 (368)
                      .=..++.++|.++.+..- .+.+   -|-+.+.++-|+.-  +|+|.+--|-     . ..++.+...-   ++-.+|.|
T Consensus        58 SFE~A~~~LGg~vi~l~~-~~ssl~kgEsl~DTarvLs~y--~D~IviR~~~-----~-~~~~~lA~~~---~vPVINag  125 (355)
T 4a8p_A           58 SFETAMEQLGGHGEYLAP-GQIQLGGHETIEDTSRVLSRL--VDILMARVER-----H-HSIVDLANCA---TIPVINGM  125 (355)
T ss_dssp             HHHHHHHHTTCEEEEECB-TTBCBTTTBCHHHHHHHHTTT--CSEEEEECSS-----H-HHHHHHHHHC---SSCEEECC
T ss_pred             hHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CCEEEEecCc-----H-HHHHHHHHhC---CCCEEeCC
Confidence            456789999999987642 2211   34577777777764  8999987652     2 2222222111   23456653


Q ss_pred             eccccCCcCccccCCHHH-HHHHHHHh--CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------
Q 017679          201 NLAMRGREPLFIPCTPKG-CIELLIRS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------  266 (368)
Q Consensus       201 ~L~~g~~~~~~~PcTa~g-v~~lL~~~--~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------  266 (368)
                             .+.+.||=+.+ ++.+.++.  |..++|++|++||-++.|.+.++..|...|++|+++.-..           
T Consensus       126 -------~~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~  198 (355)
T 4a8p_A          126 -------SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKL  198 (355)
T ss_dssp             -------CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHH
T ss_pred             -------CCCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHH
Confidence                   24567998888 44444444  3379999999999998899999999999999999986332           


Q ss_pred             --------------CCHhhhccCCCEEEEec----CC-------------CCc-ccCCCc---CCCcEEEEeec
Q 017679          267 --------------KNPEQITSEADIVIAAA----GV-------------ANL-VRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       267 --------------~~L~~~~~~ADIVIsAv----G~-------------p~~-I~~e~i---k~gavVIDvg~  305 (368)
                                    .++. .+++||+|.+-+    |.             |.+ |+.+.+   +++++|.=++-
T Consensus       199 ~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLP  271 (355)
T 4a8p_A          199 AKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLP  271 (355)
T ss_dssp             HHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSC
T ss_pred             HHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCC
Confidence                          3456 789999999743    31             213 455443   57888887774

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=96.14  E-value=0.0022  Score=56.20  Aligned_cols=95  Identities=14%  Similarity=0.147  Sum_probs=60.1

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHh---
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPE---  270 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~---  270 (368)
                      ||....++..|.+..---.|++|+|+|+++-+|+.++.++...|++|+++.+...                   +..   
T Consensus        20 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~   99 (198)
T 1pqw_A           20 GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEI   99 (198)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHH
T ss_pred             hHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHH
Confidence            4333344445544332346999999997556799999999999999988865421                   111   


Q ss_pred             -hhc--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecCC
Q 017679          271 -QIT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       271 -~~~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~  307 (368)
                       +.+  ...|+||.++|.+.+ --.+.++++..++.+|...
T Consensus       100 ~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          100 LELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             HHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGG
T ss_pred             HHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCC
Confidence             111  247888888874322 1234567777788888643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.14  E-value=0.006  Score=56.55  Aligned_cols=59  Identities=31%  Similarity=0.296  Sum_probs=46.3

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------C------Hhh-------hccCCCEEEEe
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------N------PEQ-------ITSEADIVIAA  282 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------~------L~~-------~~~~ADIVIsA  282 (368)
                      ..+++||+|+|.|+++-+|+.++..|+++|++|.++.+...           |      +.+       ....-|+||+.
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~n   88 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNN   88 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            45789999999999888899999999999999999877532           1      111       22367999988


Q ss_pred             cCC
Q 017679          283 AGV  285 (368)
Q Consensus       283 vG~  285 (368)
                      +|.
T Consensus        89 Ag~   91 (269)
T 3vtz_A           89 AGI   91 (269)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            885

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.11  E-value=0.0055  Score=56.09  Aligned_cols=38  Identities=29%  Similarity=0.411  Sum_probs=34.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   45 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLD   45 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999989999999999999999998765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.11  E-value=0.0062  Score=49.52  Aligned_cols=54  Identities=20%  Similarity=0.288  Sum_probs=40.9

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------C---Hh-hhccCCCEEEEecCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------N---PE-QITSEADIVIAAAGVA  286 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~---L~-~~~~~ADIVIsAvG~p  286 (368)
                      +++++|+|.|. +|+.++..|.+.|.+|+++.++..                   +   +. ..+.++|+||.+++.+
T Consensus         4 ~m~i~IiG~G~-iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   80 (140)
T 1lss_A            4 GMYIIIAGIGR-VGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE   80 (140)
T ss_dssp             -CEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence            57899999876 599999999999999999976421                   1   11 1256789999998764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.11  E-value=0.015  Score=56.48  Aligned_cols=94  Identities=18%  Similarity=0.173  Sum_probs=59.8

Q ss_pred             ccCCHHHHHHHHHHhCC----CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------------CCH
Q 017679          212 IPCTPKGCIELLIRSGV----EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNP  269 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i----~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------------~~L  269 (368)
                      +||....++..|.+..-    .-.|++|+|+|+++.||..+++++...|++|+.+.+..                  .++
T Consensus       160 l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~  239 (375)
T 2vn8_A          160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSV  239 (375)
T ss_dssp             SHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCH
T ss_pred             hHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHH
Confidence            34444444555543222    34799999999766679999999999999987665321                  122


Q ss_pred             hhhc---cCCCEEEEecCCCCc-c--cCCCcCCCcEEEEeec
Q 017679          270 EQIT---SEADIVIAAAGVANL-V--RGSWLKPGAVVLDVGT  305 (368)
Q Consensus       270 ~~~~---~~ADIVIsAvG~p~~-I--~~e~ik~gavVIDvg~  305 (368)
                      .+.+   ..+|+||.++|.+.. +  .-+.++++-.++.+|.
T Consensus       240 ~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          240 EEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             HHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred             HHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCC
Confidence            2222   247888888887622 2  2345777777777774

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.10  E-value=0.0016  Score=63.80  Aligned_cols=74  Identities=16%  Similarity=0.122  Sum_probs=55.0

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhcc----CCCEEEEecCCCC---ccc
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITS----EADIVIAAAGVAN---LVR  290 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~----~ADIVIsAvG~p~---~I~  290 (368)
                      -++|.|||.|.+ |.+++..|.+.|.+|++++++.              .++.+.++    ++|+||.+++...   .+.
T Consensus         8 ~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~   86 (341)
T 3ktd_A            8 SRPVCILGLGLI-GGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLD   86 (341)
T ss_dssp             SSCEEEECCSHH-HHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHH
T ss_pred             CCEEEEEeecHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHH
Confidence            467999999876 9999999999999999998763              24445554    4799999998422   111


Q ss_pred             -CCCcCCCcEEEEeecC
Q 017679          291 -GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 -~e~ik~gavVIDvg~n  306 (368)
                       -...++|++|+|++..
T Consensus        87 ~l~~~~~~~iv~Dv~Sv  103 (341)
T 3ktd_A           87 AVHTHAPNNGFTDVVSV  103 (341)
T ss_dssp             HHHHHCTTCCEEECCSC
T ss_pred             HHHccCCCCEEEEcCCC
Confidence             0113789999999864

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=96.10  E-value=0.0059  Score=58.43  Aligned_cols=72  Identities=18%  Similarity=0.207  Sum_probs=54.2

Q ss_pred             cceEEEEccCccchHHHHHHHhhCC-------CEEEEEeCCCC---------------------------------CHhh
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHALTK---------------------------------NPEQ  271 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~g-------AtVti~h~~t~---------------------------------~L~~  271 (368)
                      .++|.|||.|.+ |.+++..|++.|       .+|+++.++..                                 ++.+
T Consensus         8 ~mkI~iIG~G~m-G~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (354)
T 1x0v_A            8 SKKVCIVGSGNW-GSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ   86 (354)
T ss_dssp             CEEEEEECCSHH-HHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred             CCeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence            358999999875 999999999988       88999976532                                 2334


Q ss_pred             hccCCCEEEEecCCCCc---cc--CCCcCCCcEEEEee
Q 017679          272 ITSEADIVIAAAGVANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      .+++||+||.++.....   +.  ...++++.+||++.
T Consensus        87 ~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~  124 (354)
T 1x0v_A           87 AAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLI  124 (354)
T ss_dssp             HHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECC
T ss_pred             HHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEEC
Confidence            56789999999975321   11  24567899999985

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.10  E-value=0.0048  Score=57.20  Aligned_cols=57  Identities=26%  Similarity=0.279  Sum_probs=45.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC----------H-------------hhhccCCCEEEEecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN----------P-------------EQITSEADIVIAAAGV  285 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~----------L-------------~~~~~~ADIVIsAvG~  285 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.+....          +             .+...+-|+||+.+|.
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~  104 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGV  104 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence            5799999999998888999999999999999998876321          1             1122368999998885

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.09  E-value=0.0078  Score=56.05  Aligned_cols=39  Identities=23%  Similarity=0.220  Sum_probs=35.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~   67 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKP   67 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            358999999999988889999999999999999998764

>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*

Probab=96.08  E-value=0.075  Score=52.31  Aligned_cols=192  Identities=15%  Similarity=0.185  Sum_probs=113.7

Q ss_pred             eeeecHHHHHHHHHHHHHHHHHHHHcCCCC----CEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcC--------
Q 017679           75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKV----PGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFA--------  142 (368)
Q Consensus        75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~----P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~--------  142 (368)
                      .+|+-+.+.++=.+.|-+...++|+.....    -.++. ++= .|...+-+ .=..+++++|.++.++.-.        
T Consensus        25 hlLsi~Dls~~ei~~ll~~A~~~k~~~~~~~L~gK~va~-lF~-epSTRTR~-SFE~A~~~LGg~~i~l~~~~ss~~~~~  101 (359)
T 3kzn_A           25 HFLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIAL-VFF-NPSMRTRT-SFELGAFQLGGHAVVLQPGKDAWPIEF  101 (359)
T ss_dssp             CBSCGGGSCHHHHHHHHHHHHHHHHCCCCCTTTTCEEEE-EES-SCCHHHHH-HHHHHHHHTTCEEEEECHHHHSCCEEC
T ss_pred             cccchhhCCHHHHHHHHHHHHHHHhcCCCCcCCCCEEEE-Eec-CCCccHHH-HHHHHHHHcCCCEEecCCCCccccccc
Confidence            367766665544455556666666542111    13444 443 23333333 5577899999998876321        


Q ss_pred             -CC-----CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCC-----HHHHHhcCCcccccCccCcceeeeccccCCcCcc
Q 017679          143 -DG-----CTEDEVLNALSNYNQDSSINGILVQLPLPQHLD-----EGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLF  211 (368)
Q Consensus       143 -~~-----~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id-----~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~  211 (368)
                       ..     -..|.+.+.++-+..-  +|+|.+--. +...+     +...++.+...-+   +-.+|.     |+   ..
T Consensus       102 ~~~s~~~~~k~Es~~DTarvls~y--~D~iviR~~-~~~~~~~~~~~~~~~~~~a~~~~---vPVIN~-----g~---~~  167 (359)
T 3kzn_A          102 NLGTVMDGDTEEHIAEVARVLGRY--VDLIGVRAF-PKFVDWSKDREDQVLKSFAKYSP---VPVINM-----ET---IT  167 (359)
T ss_dssp             SSSCCCCSSCCEEHHHHHHHHHHH--CSEEEEECC-CCSSCHHHHTTCHHHHHHHHHCS---SCEEES-----SS---SC
T ss_pred             cccccccCcccchHHHHHHHHhcc--CcEEEEEcc-ccccchhcchhhHHHHHHHHhCC---CcccCc-----cc---cc
Confidence             10     0124466666666553  788888632 11110     1122222211111   223453     21   34


Q ss_pred             ccCCHHH-HHHHHHHhCC-CCccceEEEEcc------CccchHHHHHHHhhCCCEEEEEeCC------------------
Q 017679          212 IPCTPKG-CIELLIRSGV-EIMGKNAVVIGR------SNIVGLPTSLLLQRHHATVSIVHAL------------------  265 (368)
Q Consensus       212 ~PcTa~g-v~~lL~~~~i-~l~GK~VvVIG~------g~~VGrpla~lL~~~gAtVti~h~~------------------  265 (368)
                      .||=+.+ ++.+.++.|. +++|++++++|.      ++.|.+.+..++...|++|+++.-.                  
T Consensus       168 HPtQaL~Dl~Ti~e~~G~~dl~g~kv~~~~~~~gd~~~~~Va~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~  247 (359)
T 3kzn_A          168 HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVA  247 (359)
T ss_dssp             CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHcCCccccCCeEEEEEeecCCccccchhhhhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHH
Confidence            6997777 6666666664 799999999975      3457888999999999999988653                  


Q ss_pred             --------CCCHhhhccCCCEEEEec
Q 017679          266 --------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       266 --------t~~L~~~~~~ADIVIsAv  283 (368)
                              +.++.+.+++||+|.+-.
T Consensus       248 ~~g~~i~~~~d~~eav~~aDvvyt~r  273 (359)
T 3kzn_A          248 ESGGSLQVSHDIDSAYAGADVVYAKS  273 (359)
T ss_dssp             HHSCEEEEECCHHHHHTTCSEEEEEC
T ss_pred             hhCCCcccccCHHHHhcCCeEEEEEE
Confidence                    246778899999998654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.07  E-value=0.0096  Score=56.74  Aligned_cols=36  Identities=19%  Similarity=0.369  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhh--CCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQR--HHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~--~gAtVti~h~  264 (368)
                      +++||+|+|.|+++-+|+.++..|++  .|++|+++.+
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r   44 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK   44 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence            57899999999999999999999999  8999999976

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.07  E-value=0.0051  Score=55.13  Aligned_cols=38  Identities=24%  Similarity=0.301  Sum_probs=34.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   40 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS   40 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999999999999999999998775

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.06  E-value=0.0062  Score=54.68  Aligned_cols=38  Identities=24%  Similarity=0.246  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~   41 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ   41 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            57899999999988889999999999999999987753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.05  E-value=0.012  Score=54.82  Aligned_cols=54  Identities=15%  Similarity=0.129  Sum_probs=45.3

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------CHhhhccCCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------~L~~~~~~ADIVIsAvG~  285 (368)
                      +++|+|.|+++.+|+.++..|+++|.+|+++.|...                 .+.+.++.+|+||..+|.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~   72 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAAT   72 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEccccHHHHHHhhcCCCEEEEcccc
Confidence            479999999999999999999999999999988632                 144567789999988774

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=96.05  E-value=0.0075  Score=60.98  Aligned_cols=59  Identities=14%  Similarity=0.205  Sum_probs=47.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCH-----------------hhhccCCCEEEEecCCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVAN  287 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L-----------------~~~~~~ADIVIsAvG~p~  287 (368)
                      ++++||+|+|||.|.+ |...+.+|++.||.|+++.... +++                 .+.+..+|+||.++|.+.
T Consensus         8 ~~l~~~~vlVvGgG~v-a~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~~   84 (457)
T 1pjq_A            8 CQLRDRDCLIVGGGDV-AERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT   84 (457)
T ss_dssp             ECCBTCEEEEECCSHH-HHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH
T ss_pred             EECCCCEEEEECCCHH-HHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCHH
Confidence            4789999999998875 9999999999999999997542 111                 234668999999999874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.05  E-value=0.0067  Score=54.34  Aligned_cols=38  Identities=26%  Similarity=0.266  Sum_probs=34.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~   40 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT   40 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999889999999999999999998775

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.05  E-value=0.0062  Score=55.21  Aligned_cols=38  Identities=21%  Similarity=0.246  Sum_probs=34.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~   42 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN   42 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence            46789999999998888999999999999999999875

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.02  E-value=0.003  Score=58.67  Aligned_cols=36  Identities=11%  Similarity=0.266  Sum_probs=31.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      .+++++|+|||.|++ |.+++..|.+.|. ++++++..
T Consensus        28 ~l~~~~VlVvG~Gg~-G~~va~~La~~Gv~~i~lvD~d   64 (249)
T 1jw9_B           28 ALKDSRVLIVGLGGL-GCAASQYLASAGVGNLTLLDFD   64 (249)
T ss_dssp             HHHHCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCeEEEEeeCHH-HHHHHHHHHHcCCCeEEEEcCC
Confidence            367899999999986 9999999999996 89998765

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.02  E-value=0.0072  Score=55.29  Aligned_cols=38  Identities=29%  Similarity=0.374  Sum_probs=34.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ   40 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            45789999999998889999999999999999998765

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.01  E-value=0.005  Score=58.52  Aligned_cols=94  Identities=14%  Similarity=-0.016  Sum_probs=63.0

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------CCHhhh
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQI  272 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------~~L~~~  272 (368)
                      +|....++..|.+..---.|++|+|.|+++-+|..++.++...|++|+++.+..                    .++.+.
T Consensus       127 ~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~  206 (333)
T 1v3u_A          127 GMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEA  206 (333)
T ss_dssp             SHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHH
T ss_pred             CChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHH
Confidence            443344455553333334799999999966679999999999999998886542                    122222


Q ss_pred             c-----cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          273 T-----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ~-----~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      +     ...|+||.++|.+.+ -.-+.+++|..++.+|..
T Consensus       207 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~  246 (333)
T 1v3u_A          207 LKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI  246 (333)
T ss_dssp             HHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCC
T ss_pred             HHHHhCCCCeEEEECCChHHHHHHHHHHhcCCEEEEEecc
Confidence            2     247999999986533 123567888788888854

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.01  E-value=0.0066  Score=55.61  Aligned_cols=37  Identities=27%  Similarity=0.325  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   41 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADID   41 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999998888999999999999999998875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.01  E-value=0.0068  Score=53.33  Aligned_cols=52  Identities=21%  Similarity=0.192  Sum_probs=43.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------CHh----hhccCCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPE----QITSEADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~L~----~~~~~ADIVIsAvG~  285 (368)
                      +|+|.|+++-+|+.++..|+++|++|+++.|+..               |+.    +.+...|+||.++|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence            6999999888999999999999999999987631               111    456789999988886

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=96.01  E-value=0.0067  Score=55.63  Aligned_cols=69  Identities=16%  Similarity=0.194  Sum_probs=50.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC-C-------------CCHhhhccCCCEEEEecCCCCc---cc--CCCc
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-T-------------KNPEQITSEADIVIAAAGVANL---VR--GSWL  294 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-t-------------~~L~~~~~~ADIVIsAvG~p~~---I~--~e~i  294 (368)
                      +|.|||.|.+ |.+++..|.+.|.+|+++++. .             .++.+.++++|+||.++..+..   +.  .+.+
T Consensus         2 ~I~iIG~G~m-G~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~   80 (264)
T 1i36_A            2 RVGFIGFGEV-AQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAARRAGRHV   80 (264)
T ss_dssp             EEEEESCSHH-HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred             eEEEEechHH-HHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCcCCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhc
Confidence            6899999886 999999999999999987652 1             1344567899999999986532   21  1234


Q ss_pred             CCCcEEEEeec
Q 017679          295 KPGAVVLDVGT  305 (368)
Q Consensus       295 k~gavVIDvg~  305 (368)
                      ++  +|||++.
T Consensus        81 ~~--~vi~~s~   89 (264)
T 1i36_A           81 RG--IYVDINN   89 (264)
T ss_dssp             CS--EEEECSC
T ss_pred             Cc--EEEEccC
Confidence            54  8899853

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.00  E-value=0.0077  Score=55.59  Aligned_cols=57  Identities=14%  Similarity=0.183  Sum_probs=45.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------C------Hhhhc-------cCCCEEEEecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------N------PEQIT-------SEADIVIAAAGV  285 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------~------L~~~~-------~~ADIVIsAvG~  285 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++..          |      +++.+       ...|+||+.+|.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~   84 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI   84 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            478999999999998999999999999999999877531          1      12222       268999988884

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.99  E-value=0.0064  Score=54.95  Aligned_cols=71  Identities=20%  Similarity=0.198  Sum_probs=51.4

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEE-EeCCCC---------------CHhhhccCCCEEEEecCCCCc---cc--
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSI-VHALTK---------------NPEQITSEADIVIAAAGVANL---VR--  290 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti-~h~~t~---------------~L~~~~~~ADIVIsAvG~p~~---I~--  290 (368)
                      -+++.|||.|.+ |..++..|.+.|.+|++ +.++..               +..+.++++|+||.++.....   +.  
T Consensus        23 mmkI~IIG~G~m-G~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l  101 (220)
T 4huj_A           23 MTTYAIIGAGAI-GSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDSIADIVTQV  101 (220)
T ss_dssp             SCCEEEEECHHH-HHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGGHHHHHTTC
T ss_pred             CCEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHHHHHHHHHh
Confidence            368999998875 99999999999999998 655432               223456889999999963221   11  


Q ss_pred             CCCcCCCcEEEEeec
Q 017679          291 GSWLKPGAVVLDVGT  305 (368)
Q Consensus       291 ~e~ik~gavVIDvg~  305 (368)
                      .. + ++.+|||+.-
T Consensus       102 ~~-~-~~~ivi~~~~  114 (220)
T 4huj_A          102 SD-W-GGQIVVDASN  114 (220)
T ss_dssp             SC-C-TTCEEEECCC
T ss_pred             hc-c-CCCEEEEcCC
Confidence            11 3 5889999883

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=95.99  E-value=0.0058  Score=56.46  Aligned_cols=39  Identities=26%  Similarity=0.293  Sum_probs=32.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~   61 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE   61 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            357899999999988889999999999999999998764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.98  E-value=0.0069  Score=54.91  Aligned_cols=37  Identities=24%  Similarity=0.214  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~   40 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD   40 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999998765

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.96  E-value=0.0096  Score=54.21  Aligned_cols=57  Identities=26%  Similarity=0.364  Sum_probs=45.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------C------Hhhhc-------cCCCEEEEecC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------N------PEQIT-------SEADIVIAAAG  284 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------~------L~~~~-------~~ADIVIsAvG  284 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++..           |      +.+.+       ...|+||+.+|
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag   83 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAG   83 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            578999999999888999999999999999999877531           1      12222       26799998888


Q ss_pred             C
Q 017679          285 V  285 (368)
Q Consensus       285 ~  285 (368)
                      .
T Consensus        84 ~   84 (250)
T 2fwm_X           84 I   84 (250)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.96  E-value=0.0066  Score=56.07  Aligned_cols=37  Identities=24%  Similarity=0.321  Sum_probs=34.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~   39 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE   39 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=95.95  E-value=0.0074  Score=54.98  Aligned_cols=37  Identities=30%  Similarity=0.346  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~   40 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARR   40 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4789999999999889999999999999999999875

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.94  E-value=0.0059  Score=54.95  Aligned_cols=38  Identities=18%  Similarity=0.292  Sum_probs=34.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   44 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN   44 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence            35789999999999889999999999999999998775

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.93  E-value=0.0082  Score=55.33  Aligned_cols=40  Identities=23%  Similarity=0.247  Sum_probs=35.6

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ...+++||+|+|.|+++-+|+.++..|+++|++|.++.++
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~   62 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS   62 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3457899999999998888999999999999999998874

>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A

Probab=95.93  E-value=0.029  Score=56.43  Aligned_cols=54  Identities=20%  Similarity=0.191  Sum_probs=45.5

Q ss_pred             CccccCCHHHHHHH----HHHhCCC-CccceEEEEccCccchHHHHHHHhh-CCCEEEEEe
Q 017679          209 PLFIPCTPKGCIEL----LIRSGVE-IMGKNAVVIGRSNIVGLPTSLLLQR-HHATVSIVH  263 (368)
Q Consensus       209 ~~~~PcTa~gv~~l----L~~~~i~-l~GK~VvVIG~g~~VGrpla~lL~~-~gAtVti~h  263 (368)
                      .+..++|++|++..    +++.+.+ ++||+|.|+|.|++ |+.+|.+|.. .|++|..+.
T Consensus       184 ~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~V-G~~vA~~l~~~~G~kVv~~s  243 (419)
T 1gtm_A          184 LGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNA-GYYLAKIMSEDFGMKVVAVS  243 (419)
T ss_dssp             TTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHH-HHHHHHHHHHhcCCEEEEEe
Confidence            34457999997765    4567899 99999999999886 9999999999 999988664

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.92  E-value=0.0063  Score=55.57  Aligned_cols=38  Identities=21%  Similarity=0.218  Sum_probs=34.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   47 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK   47 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999989999999999999999998775

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=95.91  E-value=0.028  Score=57.03  Aligned_cols=84  Identities=21%  Similarity=0.288  Sum_probs=65.6

Q ss_pred             HHHHHHHHhCCCCccceEEEEccC---------ccchHHHHHHHhhCCCEEEEEeCC---------------CCCHhhhc
Q 017679          218 GCIELLIRSGVEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHAL---------------TKNPEQIT  273 (368)
Q Consensus       218 gv~~lL~~~~i~l~GK~VvVIG~g---------~~VGrpla~lL~~~gAtVti~h~~---------------t~~L~~~~  273 (368)
                      =+++++++....++|++|.|+|-+         +.-...++..|.++|++|.+..-.               ..++++.+
T Consensus       319 ~vv~~l~~~~~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~  398 (444)
T 3vtf_A          319 YAVQLLEERLGGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALL  398 (444)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHH
T ss_pred             HHHHHHHHHccccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHH
Confidence            356677777778999999999933         223678899999999999998643               24667888


Q ss_pred             cCCCEEEEecCCCCcccCCCcCCCcEEEEe
Q 017679          274 SEADIVIAAAGVANLVRGSWLKPGAVVLDV  303 (368)
Q Consensus       274 ~~ADIVIsAvG~p~~I~~e~ik~gavVIDv  303 (368)
                      ++||.||.+|..+.|-..+|  ++.+|||.
T Consensus       399 ~~aDavvi~t~h~ef~~ld~--~~~vv~D~  426 (444)
T 3vtf_A          399 DQVEGVIIATAWPQYEGLDY--RGKVVVDG  426 (444)
T ss_dssp             HHCSEEEECSCCGGGGGSCC--TTCEEEES
T ss_pred             hCCCEEEEccCCHHHhCCCc--CCCEEEEC
Confidence            99999999999888755555  46799994

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=95.91  E-value=0.0081  Score=54.77  Aligned_cols=37  Identities=27%  Similarity=0.321  Sum_probs=34.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~   39 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN   39 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999998888999999999999999998775

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.91  E-value=0.0096  Score=57.67  Aligned_cols=55  Identities=24%  Similarity=0.299  Sum_probs=44.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      ..+|+|||+|. +|.+++..|+..|. +|+++.+..                          .++++.+++||+||.++|
T Consensus         9 ~~kI~VIGaG~-vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g   87 (331)
T 1pzg_A            9 RKKVAMIGSGM-IGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG   87 (331)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence            35899999965 59999999998886 888886432                          356667899999999998


Q ss_pred             CCC
Q 017679          285 VAN  287 (368)
Q Consensus       285 ~p~  287 (368)
                      .|.
T Consensus        88 ~p~   90 (331)
T 1pzg_A           88 LTK   90 (331)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=95.91  E-value=0.0086  Score=55.34  Aligned_cols=38  Identities=24%  Similarity=0.168  Sum_probs=34.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   54 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN   54 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999889999999999999999999875

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=95.90  E-value=0.0042  Score=63.15  Aligned_cols=73  Identities=16%  Similarity=0.265  Sum_probs=55.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhc---cCCCEEEEecCCCCc--
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT---SEADIVIAAAGVANL--  288 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~---~~ADIVIsAvG~p~~--  288 (368)
                      .+|.|||.|.+ |.+++..|.+.|.+|++++++.                   .++++.+   +++|+||.+++.+..  
T Consensus         3 m~IgvIG~G~m-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~   81 (482)
T 2pgd_A            3 ADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (482)
T ss_dssp             BSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CeEEEEChHHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHH
Confidence            47999999875 9999999999999999998753                   1344444   489999999987532  


Q ss_pred             --cc--CCCcCCCcEEEEeecC
Q 017679          289 --VR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       289 --I~--~e~ik~gavVIDvg~n  306 (368)
                        +.  ...+++|.+|||++..
T Consensus        82 ~vl~~l~~~l~~g~iII~~s~~  103 (482)
T 2pgd_A           82 NFIEKLVPLLDIGDIIIDGGNS  103 (482)
T ss_dssp             HHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHhhcCCCCEEEECCCC
Confidence              21  1356789999998643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.89  E-value=0.0069  Score=55.95  Aligned_cols=55  Identities=18%  Similarity=0.207  Sum_probs=44.0

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------C------------------------CHhhhccCCCEEE
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------K------------------------NPEQITSEADIVI  280 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------~------------------------~L~~~~~~ADIVI  280 (368)
                      +++|+|.|+++-+|+.++..|+++|++|+++.|..       .                        ++.+.++.+|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            67899999988889999999999999999887754       0                        1335567789999


Q ss_pred             EecCCC
Q 017679          281 AAAGVA  286 (368)
Q Consensus       281 sAvG~p  286 (368)
                      .++|..
T Consensus        82 ~~a~~~   87 (307)
T 2gas_A           82 CAAGRL   87 (307)
T ss_dssp             ECSSSS
T ss_pred             ECCccc
Confidence            887754

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=95.89  E-value=0.0065  Score=56.34  Aligned_cols=38  Identities=18%  Similarity=0.298  Sum_probs=34.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~   60 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR   60 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999998888999999999999999998775

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=95.89  E-value=0.0064  Score=54.96  Aligned_cols=40  Identities=23%  Similarity=0.351  Sum_probs=36.0

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..+++||+|+|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   48 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE   48 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH
Confidence            3568999999999998899999999999999999998763

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=95.88  E-value=0.0072  Score=57.94  Aligned_cols=94  Identities=17%  Similarity=0.158  Sum_probs=66.0

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCC-------------------CC---
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALT-------------------KN---  268 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t-------------------~~---  268 (368)
                      +||....++..|++.++ -.|++|+|+|+|+.+|..++.++... |++|+++.++.                   .+   
T Consensus       152 l~~~~~ta~~~l~~~~~-~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  230 (347)
T 1jvb_A          152 LTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLA  230 (347)
T ss_dssp             GGTHHHHHHHHHHHTTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHH
T ss_pred             chhhHHHHHHHHHhcCC-CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHH
Confidence            46655556666665433 36999999999967799999999998 99998886542                   12   


Q ss_pred             -Hhhhc--cCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          269 -PEQIT--SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       269 -L~~~~--~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                       +.+..  ...|+||.++|.+..+  --+.++++-.++.+|..
T Consensus       231 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~  273 (347)
T 1jvb_A          231 EIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF  273 (347)
T ss_dssp             HHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSS
T ss_pred             HHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCC
Confidence             22233  3579999999876433  23567787778888854

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.88  E-value=0.0079  Score=54.54  Aligned_cols=37  Identities=19%  Similarity=0.243  Sum_probs=33.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN   39 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            4689999999998889999999999999999998775

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.88  E-value=0.008  Score=54.91  Aligned_cols=38  Identities=26%  Similarity=0.293  Sum_probs=34.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~   49 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA   49 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            35789999999999999999999999999999998765

>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A

Probab=95.88  E-value=0.038  Score=53.81  Aligned_cols=164  Identities=11%  Similarity=0.074  Sum_probs=108.3

Q ss_pred             HHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeee
Q 017679          124 NKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN  201 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~~~~--~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~  201 (368)
                      .=..++.++|.++.++.-....  .-|-+.+.++-|+.-  +|+|.+--|-  |-....+.+..       .+-.+|.| 
T Consensus        63 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~--~~~~~~lA~~~-------~vPVINa~-  130 (321)
T 1oth_A           63 STETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSM--ADAVLARVYK--QSDLDTLAKEA-------SIPIINGL-  130 (321)
T ss_dssp             HHHHHHHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHH--CSEEEEECSC--HHHHHHHHHHC-------SSCEEESC-
T ss_pred             HHHHHHHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHh--CCEEEEeCCC--hhHHHHHHHhC-------CCCEEcCC-
Confidence            5578899999999877632210  123455666666654  6889987652  22222222211       23456642 


Q ss_pred             ccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC---------------
Q 017679          202 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------------  265 (368)
Q Consensus       202 L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~---------------  265 (368)
                            .+...||=+.+ ++.+.++. ..++|++|++||-++.|.+.++..|...|++|+++.-.               
T Consensus       131 ------~~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~  203 (321)
T 1oth_A          131 ------SDLYHPIQILADYLTLQEHY-SSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQY  203 (321)
T ss_dssp             ------CSSCCHHHHHHHHHHHHHHH-SCCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHH
T ss_pred             ------CCCCCcHHHHHHHHHHHHHh-CCcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHH
Confidence                  24567998888 44444444 57999999999998888999999999999999998632               


Q ss_pred             ----------CCCHhhhccCCCEEEEec----CCC-----------Cc-ccCCCc---CCCcEEEEeecC
Q 017679          266 ----------TKNPEQITSEADIVIAAA----GVA-----------NL-VRGSWL---KPGAVVLDVGTC  306 (368)
Q Consensus       266 ----------t~~L~~~~~~ADIVIsAv----G~p-----------~~-I~~e~i---k~gavVIDvg~n  306 (368)
                                +.++.+.+++||+|.+-+    |..           .+ |+.+.+   +++++|.=++-.
T Consensus       204 a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP~  273 (321)
T 1oth_A          204 AKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPR  273 (321)
T ss_dssp             HHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSCC
T ss_pred             HHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCCC
Confidence                      245678899999999844    421           12 454443   678888877754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.87  E-value=0.012  Score=53.80  Aligned_cols=38  Identities=21%  Similarity=0.277  Sum_probs=34.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   40 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP   40 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            46899999999998899999999999999999988753

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=95.87  E-value=0.0092  Score=54.56  Aligned_cols=38  Identities=24%  Similarity=0.144  Sum_probs=34.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   42 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN   42 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999889999999999999999998775

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.87  E-value=0.015  Score=53.47  Aligned_cols=39  Identities=18%  Similarity=0.207  Sum_probs=33.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~   55 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG   55 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            357899999999999899999999999999999998764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=95.87  E-value=0.0068  Score=55.34  Aligned_cols=38  Identities=29%  Similarity=0.284  Sum_probs=34.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   42 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS   42 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998888999999999999999998875

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=95.87  E-value=0.0083  Score=55.67  Aligned_cols=37  Identities=19%  Similarity=0.144  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   55 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG   55 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999998775

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=95.87  E-value=0.0068  Score=61.69  Aligned_cols=73  Identities=25%  Similarity=0.310  Sum_probs=54.8

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------C-------------------CHhhhccCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------K-------------------NPEQITSEAD  277 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------~-------------------~L~~~~~~AD  277 (368)
                      ..+|.|||.|. ||.++|..|++.|.+|+.++++.               +                   ++.+.+++||
T Consensus         8 ~~~I~VIG~G~-vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD   86 (478)
T 2y0c_A            8 SMNLTIIGSGS-VGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD   86 (478)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred             CceEEEECcCH-HHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence            35899999987 59999999999999999997641               1                   2224567899


Q ss_pred             EEEEecCCC---------Cccc------CCCcCCCcEEEEeec
Q 017679          278 IVIAAAGVA---------NLVR------GSWLKPGAVVLDVGT  305 (368)
Q Consensus       278 IVIsAvG~p---------~~I~------~e~ik~gavVIDvg~  305 (368)
                      +||.+++.|         ..+.      ...+++|++||+.+.
T Consensus        87 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST  129 (478)
T 2y0c_A           87 VQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKST  129 (478)
T ss_dssp             EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             EEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            999999886         2221      134678999988764

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=95.86  E-value=0.0075  Score=59.79  Aligned_cols=72  Identities=29%  Similarity=0.363  Sum_probs=53.5

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------CCHhhhccCCCEEEE
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQITSEADIVIA  281 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------~~L~~~~~~ADIVIs  281 (368)
                      +|.|||.|. ||.+++..|++ |.+|+++.++.                                .+..+.+++||+||.
T Consensus         2 kI~VIG~G~-vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii   79 (402)
T 1dlj_A            2 KIAVAGSGY-VGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII   79 (402)
T ss_dssp             EEEEECCSH-HHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred             EEEEECCCH-HHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence            689999976 59999999998 99999997642                                123345678999999


Q ss_pred             ecCCCC----------ccc------CCCcCCCcEEEEeecCCC
Q 017679          282 AAGVAN----------LVR------GSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       282 AvG~p~----------~I~------~e~ik~gavVIDvg~n~~  308 (368)
                      +++.|.          .+.      .. +++|.+||+..+++.
T Consensus        80 avpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~  121 (402)
T 1dlj_A           80 ATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPI  121 (402)
T ss_dssp             CCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCT
T ss_pred             ecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCc
Confidence            998772          111      12 678999999655543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.86  E-value=0.0058  Score=53.24  Aligned_cols=53  Identities=19%  Similarity=0.297  Sum_probs=42.3

Q ss_pred             cc-eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------CHhhhcc---CCCEEEEecCC
Q 017679          232 GK-NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NPEQITS---EADIVIAAAGV  285 (368)
Q Consensus       232 GK-~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------~L~~~~~---~ADIVIsAvG~  285 (368)
                      || +++|.|+++-+|+.++..|+ +|++|+++.|+..          ++++.+.   ..|+||..+|.
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~   68 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGS   68 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            56 89999999999999999999 9999999987631          2233333   47999988884

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.86  E-value=0.0066  Score=54.60  Aligned_cols=37  Identities=24%  Similarity=0.281  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~   39 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH   39 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999999999999999999999998775

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=95.86  E-value=0.008  Score=54.96  Aligned_cols=53  Identities=11%  Similarity=0.165  Sum_probs=44.4

Q ss_pred             cceEEEEccCccchHHHHHHHhhCC----CEEEEEeCCC--------CCHhhhccCCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT--------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t--------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ..+|.|||.|.+ |.+++..|.+.|    ..|++++++.        .+..+.++++|+||.++..
T Consensus         4 ~m~i~iiG~G~m-G~~~a~~l~~~g~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~   68 (262)
T 2rcy_A            4 NIKLGFMGLGQM-GSALAHGIANANIIKKENLFYYGPSKKNTTLNYMSSNEELARHCDIIVCAVKP   68 (262)
T ss_dssp             SSCEEEECCSHH-HHHHHHHHHHHTSSCGGGEEEECSSCCSSSSEECSCHHHHHHHCSEEEECSCT
T ss_pred             CCEEEEECcCHH-HHHHHHHHHHCCCCCCCeEEEEeCCcccCceEEeCCHHHHHhcCCEEEEEeCH
Confidence            358999999875 999999999888    6899998754        3566778899999999983

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=95.86  E-value=0.0082  Score=57.12  Aligned_cols=94  Identities=17%  Similarity=0.105  Sum_probs=63.0

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHh---
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE---  270 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~---  270 (368)
                      ||....++..|.+..---.|++|+|+|+++.+|..++.++...|++|+++.+..                   .+..   
T Consensus       127 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i  206 (333)
T 1wly_A          127 MLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVV  206 (333)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred             hhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHH
Confidence            333344455555433334699999999866679999999999999998886642                   1111   


Q ss_pred             -hhc--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          271 -QIT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 -~~~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                       +.+  ...|+||.++|...+ ---+.++++-.++.+|..
T Consensus       207 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~  246 (333)
T 1wly_A          207 REITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHA  246 (333)
T ss_dssp             HHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEEECCCT
T ss_pred             HHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEEEEecC
Confidence             122  247999999987332 123567888788888864

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=95.86  E-value=0.012  Score=59.83  Aligned_cols=55  Identities=18%  Similarity=0.217  Sum_probs=46.3

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------CHhhhccCCCEEEEecCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------~L~~~~~~ADIVIsAvG~p  286 (368)
                      +++|+|.|++|.+|+.++..|+++|.+|+++.|...           .+.+.+..+|+||.++|..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCCc
Confidence            789999999999999999999999999999987632           2456678899999888753

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=95.85  E-value=0.0081  Score=54.95  Aligned_cols=66  Identities=20%  Similarity=0.250  Sum_probs=48.4

Q ss_pred             eEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC---------------CHhhhccCCCEEEEecCCCCccc---CCCc
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK---------------NPEQITSEADIVIAAAGVANLVR---GSWL  294 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~---------------~L~~~~~~ADIVIsAvG~p~~I~---~e~i  294 (368)
                      +|.|||.|.+ |..++..|.+.| ..|++++++..               ++.+.+ ++|+||.++. |..+.   .+..
T Consensus         2 ~i~iiG~G~m-G~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~l~   78 (263)
T 1yqg_A            2 NVYFLGGGNM-AAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKNIR   78 (263)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTTCC
T ss_pred             EEEEECchHH-HHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHHhc
Confidence            6899999875 999999999999 89999987531               333456 8999999998 43210   1111


Q ss_pred             -CCCcEEEEe
Q 017679          295 -KPGAVVLDV  303 (368)
Q Consensus       295 -k~gavVIDv  303 (368)
                       + +.+|||+
T Consensus        79 ~~-~~ivv~~   87 (263)
T 1yqg_A           79 TN-GALVLSV   87 (263)
T ss_dssp             CT-TCEEEEC
T ss_pred             cC-CCEEEEe
Confidence             4 7888888

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=95.85  E-value=0.0084  Score=55.29  Aligned_cols=39  Identities=10%  Similarity=0.187  Sum_probs=35.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~   65 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK   65 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH
Confidence            468999999999999999999999999999999988753

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=95.85  E-value=0.0079  Score=55.98  Aligned_cols=37  Identities=27%  Similarity=0.196  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~   62 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARD   62 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999998888999999999999999998765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=95.84  E-value=0.0079  Score=55.50  Aligned_cols=37  Identities=19%  Similarity=0.112  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~   65 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART   65 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence            4789999999999999999999999999999998775

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=95.84  E-value=0.0076  Score=61.28  Aligned_cols=74  Identities=23%  Similarity=0.411  Sum_probs=54.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhC--CCEEEEEeCCC---------------C------------------CHhhhccCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT---------------K------------------NPEQITSEAD  277 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t---------------~------------------~L~~~~~~AD  277 (368)
                      .+|.|||.|.+ |.++|..|++.  |.+|++++++.               +                  ++.+.+++||
T Consensus        10 mkI~VIG~G~v-G~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD   88 (481)
T 2o3j_A           10 SKVVCVGAGYV-GGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD   88 (481)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred             CEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence            48999999875 99999999988  68999997641               1                  2234567899


Q ss_pred             EEEEecCCCCc--------------cc------CCCcCCCcEEEEeecCC
Q 017679          278 IVIAAAGVANL--------------VR------GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       278 IVIsAvG~p~~--------------I~------~e~ik~gavVIDvg~n~  307 (368)
                      +||.+++.|.-              +.      ...+++|.+|||.++.+
T Consensus        89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~  138 (481)
T 2o3j_A           89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP  138 (481)
T ss_dssp             EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred             EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            99999987631              11      13467899999976544

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.84  E-value=0.0085  Score=54.94  Aligned_cols=37  Identities=24%  Similarity=0.416  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN   40 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999889999999999999999998775

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=95.83  E-value=0.0086  Score=55.05  Aligned_cols=37  Identities=24%  Similarity=0.246  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL   40 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999998775

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=95.83  E-value=0.0097  Score=54.13  Aligned_cols=39  Identities=23%  Similarity=0.242  Sum_probs=35.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~   43 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK   43 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence            467899999999998889999999999999999998763

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=95.83  E-value=0.014  Score=56.04  Aligned_cols=58  Identities=22%  Similarity=0.240  Sum_probs=46.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC-----------------------CHhhhccCCCEEEEecC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-----------------------NPEQITSEADIVIAAAG  284 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~-----------------------~L~~~~~~ADIVIsAvG  284 (368)
                      .+++++|+|.|+++.+|+.++..|+++| ++|+++.+...                       .+.+.++.+|+||.++|
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~  108 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT  108 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence            4688999999999999999999999999 99999876421                       13345668899998877


Q ss_pred             CC
Q 017679          285 VA  286 (368)
Q Consensus       285 ~p  286 (368)
                      ..
T Consensus       109 ~~  110 (377)
T 2q1s_A          109 YH  110 (377)
T ss_dssp             CS
T ss_pred             cc
Confidence            43

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=95.82  E-value=0.0052  Score=59.27  Aligned_cols=94  Identities=16%  Similarity=0.115  Sum_probs=63.8

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhc
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT  273 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~  273 (368)
                      ||....++..|.+..---.|++|+|+|+++.+|..++.++...|++|+++.+..                   .++.+.+
T Consensus       149 ~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~  228 (353)
T 4dup_A          149 PETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVI  228 (353)
T ss_dssp             HHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred             hhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHH
Confidence            443344444553333234699999997766679999999999999998887542                   2232322


Q ss_pred             -----cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          274 -----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       274 -----~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                           ...|+||.++|.+.+ -.-+.++++-.++.+|..
T Consensus       229 ~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~  267 (353)
T 4dup_A          229 KAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFL  267 (353)
T ss_dssp             HHHHSSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCT
T ss_pred             HHHhCCCceEEEECCCHHHHHHHHHHhccCCEEEEEEec
Confidence                 248999999997643 234567888888888864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.81  E-value=0.012  Score=55.40  Aligned_cols=57  Identities=18%  Similarity=0.191  Sum_probs=43.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------CHhhhccC--CCEEEEec
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQITSE--ADIVIAAA  283 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------~L~~~~~~--ADIVIsAv  283 (368)
                      .+++++|+|.|+++-+|+.++..|+++|++|+++.+...                       .+.+.++.  .|+||..+
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            467899999999999999999999999999999876531                       12234455  89999887


Q ss_pred             CC
Q 017679          284 GV  285 (368)
Q Consensus       284 G~  285 (368)
                      |.
T Consensus        98 ~~   99 (333)
T 2q1w_A           98 AS   99 (333)
T ss_dssp             CC
T ss_pred             ee
Confidence            74

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.81  E-value=0.012  Score=56.24  Aligned_cols=94  Identities=14%  Similarity=0.119  Sum_probs=65.7

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQ  271 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~  271 (368)
                      .+||....++..|++.++ -.|++|+|+|+|+ +|..+++++...|++|+.+.+..                   .++.+
T Consensus       145 ~l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~  222 (339)
T 1rjw_A          145 PIFCAGVTTYKALKVTGA-KPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAK  222 (339)
T ss_dssp             GGGTHHHHHHHHHHHHTC-CTTCEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHH
T ss_pred             hhhhhHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHH
Confidence            346655555666666543 3689999999977 69999999999999998886532                   12222


Q ss_pred             h----ccCCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679          272 I----TSEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~----~~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      .    +..+|+||.++|.+..+.  -+.++++..++.+|..
T Consensus       223 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  263 (339)
T 1rjw_A          223 FMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLP  263 (339)
T ss_dssp             HHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred             HHHHHhCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEeccc
Confidence            2    246899999999754432  3457777788888864

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=95.81  E-value=0.014  Score=55.94  Aligned_cols=123  Identities=16%  Similarity=0.084  Sum_probs=72.3

Q ss_pred             cceEEEEccCccchHH-HHHHHhhCCCEEEEEeCCCC-CHhhhccCCCEEEEecCCCCcccCCCcC---CCcEEEEeecC
Q 017679          232 GKNAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTK-NPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVGTC  306 (368)
Q Consensus       232 GK~VvVIG~g~~VGrp-la~lL~~~gAtVti~h~~t~-~L~~~~~~ADIVIsAvG~p~~I~~e~ik---~gavVIDvg~n  306 (368)
                      .|+|.|||-|++ |.. +|.+|.++|++|+++..+.. ...+.+++..+-|. .|.    .++.+.   .+.+|+--|++
T Consensus         4 ~~~i~~iGiGg~-Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~-~g~----~~~~l~~~~~d~vV~Spgi~   77 (326)
T 3eag_A            4 MKHIHIIGIGGT-FMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVY-EGF----DAAQLDEFKADVYVIGNVAK   77 (326)
T ss_dssp             CCEEEEESCCSH-HHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEE-ESC----CGGGGGSCCCSEEEECTTCC
T ss_pred             CcEEEEEEECHH-HHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEE-CCC----CHHHcCCCCCCEEEECCCcC
Confidence            589999999998 995 99999999999999998652 23333443343332 121    112221   24455555554


Q ss_pred             CCCCCCCCCCCCCcEEEcccchhh--hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          307 PVDVSVDPSCEYGYRLMGDVCYEE--AMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       307 ~~~~~~d~t~~~~~kl~GDVd~~~--~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      +..+....-.+.+-++++++++-.  ..+. ..+--|-|--|.-|+..|+.++++.+
T Consensus        78 ~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~-~~~IaVTGTnGKTTTt~ll~~iL~~~  133 (326)
T 3eag_A           78 RGMDVVEAILNLGLPYISGPQWLSENVLHH-HWVLGVAGTHGKTTTASMLAWVLEYA  133 (326)
T ss_dssp             TTCHHHHHHHHTTCCEEEHHHHHHHHTGGG-SEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHcCCcEEeHHHHHHHHHhcC-CCEEEEECCCCHHHHHHHHHHHHHHc
Confidence            421000000012336888887522  1111 11224557888999999999998765

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=95.80  E-value=0.011  Score=56.32  Aligned_cols=75  Identities=20%  Similarity=0.290  Sum_probs=52.2

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------------CCHhhhccCCCEE
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------KNPEQITSEADIV  279 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------------~~L~~~~~~ADIV  279 (368)
                      +.+...++|+|||+|.+ |..++..|.+.|.+|+++ ++.                           .++ +.+..+|+|
T Consensus        14 ~~~~~~~kI~IiGaGa~-G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~v   90 (318)
T 3hwr_A           14 NLYFQGMKVAIMGAGAV-GCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLV   90 (318)
T ss_dssp             ------CEEEEESCSHH-HHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEE
T ss_pred             hhhccCCcEEEECcCHH-HHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEE
Confidence            34567789999999875 999999999999999998 432                           122 235789999


Q ss_pred             EEecCCCCc---cc--CCCcCCCcEEEEee
Q 017679          280 IAAAGVANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       280 IsAvG~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      |.++....+   +.  ...++++.+|+.+-
T Consensus        91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~  120 (318)
T 3hwr_A           91 LFCVKSTDTQSAALAMKPALAKSALVLSLQ  120 (318)
T ss_dssp             EECCCGGGHHHHHHHHTTTSCTTCEEEEEC
T ss_pred             EEEcccccHHHHHHHHHHhcCCCCEEEEeC
Confidence            999976542   11  24577888888763

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.80  E-value=0.014  Score=54.37  Aligned_cols=38  Identities=24%  Similarity=0.326  Sum_probs=34.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~   43 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSA   43 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            57899999999988889999999999999999998764

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=95.79  E-value=0.0093  Score=60.73  Aligned_cols=72  Identities=11%  Similarity=0.115  Sum_probs=54.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------------------------CCHhhhccCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------------------KNPEQITSEAD  277 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------------------------~~L~~~~~~AD  277 (368)
                      ++|.|||.|.+ |.++|..|++.|.+|++++++.                                   .++ +.+++||
T Consensus        55 ~kVaVIGaG~M-G~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aD  132 (460)
T 3k6j_A           55 NSVAIIGGGTM-GKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNCD  132 (460)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTCS
T ss_pred             CEEEEECCCHH-HHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccCC
Confidence            78999999875 9999999999999999997642                                   123 3578999


Q ss_pred             EEEEecCCCC-----ccc--CCCcCCCcEEEEeecC
Q 017679          278 IVIAAAGVAN-----LVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       278 IVIsAvG~p~-----~I~--~e~ik~gavVIDvg~n  306 (368)
                      +||.|+....     ++.  .+.+++++++++....
T Consensus       133 lVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs  168 (460)
T 3k6j_A          133 LIVESVIEDMKLKKELFANLENICKSTCIFGTNTSS  168 (460)
T ss_dssp             EEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred             EEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence            9999997432     121  2457889999876543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.79  E-value=0.0072  Score=55.69  Aligned_cols=38  Identities=26%  Similarity=0.289  Sum_probs=34.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~   43 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRR   43 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999998888999999999999999999775

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.78  E-value=0.011  Score=52.93  Aligned_cols=35  Identities=26%  Similarity=0.337  Sum_probs=32.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~   36 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG   36 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence            36899999999999999999999999999999883

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=95.77  E-value=0.0096  Score=54.26  Aligned_cols=37  Identities=27%  Similarity=0.357  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   37 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG   37 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999998888999999999999999998764

>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*

Probab=95.76  E-value=0.041  Score=54.26  Aligned_cols=149  Identities=14%  Similarity=0.096  Sum_probs=96.8

Q ss_pred             cccHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCc
Q 017679          116 RDSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG  193 (368)
Q Consensus       116 ~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDg  193 (368)
                      |...+-+ .=..+++++|.++.+..-...  ..-|-+.+.++-|..-  +|+|.+--|-  +    ..++.+...-+|  
T Consensus        80 pSTRTR~-SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~--~----~~~~~la~~s~v--  148 (358)
T 4h31_A           80 ASTRTRC-AFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRM--YDGIQYRGFG--Q----AIVEELGAFAGV--  148 (358)
T ss_dssp             CCSHHHH-HHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHHHH--CSEEEEECSC--H----HHHHHHHHHSSS--
T ss_pred             CChhhHH-HHHHHHHHcCCeEEECCcccccccCccchhHHHHHhhcc--CceeEecccc--h----hHHHHhhhhccC--
Confidence            4344443 456789999999876643211  0124467777777664  7889887552  2    222333221122  


Q ss_pred             cCcceeeeccccCCcCccccCCHHH-HHHHHHHhC-CCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC-----
Q 017679          194 FHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSG-VEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-----  265 (368)
Q Consensus       194 l~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~-i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~-----  265 (368)
                       -.+| |     . .+...||=+.+ ++.+.++.+ ..++|++|++||-+ +.|.+.++.++...|++|+++.-.     
T Consensus       149 -PVIN-G-----~-g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~  220 (358)
T 4h31_A          149 -PVWN-G-----L-TDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPD  220 (358)
T ss_dssp             -CEEE-S-----C-CSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCC
T ss_pred             -ceEC-C-----C-CcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCC
Confidence             2233 2     1 34567997777 455555554 37999999999965 457999999999999999999532     


Q ss_pred             --------------------CCCHhhhccCCCEEEEec
Q 017679          266 --------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       266 --------------------t~~L~~~~~~ADIVIsAv  283 (368)
                                          +.++.+.+++||+|.+-+
T Consensus       221 ~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~  258 (358)
T 4h31_A          221 EELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDV  258 (358)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred             HHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEE
Confidence                                247788999999998644

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=95.76  E-value=0.0095  Score=56.13  Aligned_cols=37  Identities=27%  Similarity=0.347  Sum_probs=34.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.|+|.|+++-+|+.++..|+++|++|.++.++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~   64 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVD   64 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            5899999999999888999999999999999999875

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.76  E-value=0.011  Score=53.13  Aligned_cols=36  Identities=14%  Similarity=0.174  Sum_probs=33.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~   37 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA   37 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence            689999999998899999999999999999998764

>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A

Probab=95.76  E-value=0.081  Score=52.34  Aligned_cols=163  Identities=15%  Similarity=0.095  Sum_probs=105.7

Q ss_pred             HHHHHHHHcCCeEEEEEcCC-CC-CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeee
Q 017679          124 NKIKACEEVGIKSIVTEFAD-GC-TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN  201 (368)
Q Consensus       124 ~k~k~a~~~GI~~~~~~l~~-~~-~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~  201 (368)
                      .=..++.++|.++.+..-.. .. .-|-+.+.++-|..-  +|+|.+--|-  +    ..++.+...-   ++-.+|.| 
T Consensus        88 SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~--~----~~~~~lA~~s---~vPVINa~-  155 (365)
T 4amu_A           88 AFEVAASDLGAGVTYIGPSGSNMGKKESIEDTAKVLGRF--YDGIEFRGFA--Q----SDVDALVKYS---GVPVWNGL-  155 (365)
T ss_dssp             HHHHHHHHHTCEEEEECHHHHCCSSSSCHHHHHHHHHHH--CSEEEEECSC--H----HHHHHHHHHH---CSCEEEEE-
T ss_pred             HHHHHHHhCCCEEEEcCCccccCCCCcCHHHHHHHHHhh--CcEEEEecCC--h----hHHHHHHHhC---CCCEEeCC-
Confidence            55678999999998763110 00 123355555555553  6899887552  2    2222222111   23456753 


Q ss_pred             ccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC--------------
Q 017679          202 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL--------------  265 (368)
Q Consensus       202 L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~--------------  265 (368)
                            .+.+-||=+.+ ++.+.++.| .++|++|++||-+ +.|.+.++.++...|++|+++.-.              
T Consensus       156 ------~~~~HPtQaLaDl~Ti~E~~G-~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~  228 (365)
T 4amu_A          156 ------TDDEHPTQIIADFMTMKEKFG-NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKC  228 (365)
T ss_dssp             ------CSSCCHHHHHHHHHHHHHHHS-SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHH
T ss_pred             ------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHH
Confidence                  24467998888 555555555 6999999999987 568999999999999999998532              


Q ss_pred             -------------CCCHhhhccCCCEEEEec----CC-------------CCcccCCCc---CCCcEEEEeec
Q 017679          266 -------------TKNPEQITSEADIVIAAA----GV-------------ANLVRGSWL---KPGAVVLDVGT  305 (368)
Q Consensus       266 -------------t~~L~~~~~~ADIVIsAv----G~-------------p~~I~~e~i---k~gavVIDvg~  305 (368)
                                   +.++.+.++.||+|.+-+    |.             |.-|+.+.+   +++++|.=++.
T Consensus       229 ~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcLP  301 (365)
T 4amu_A          229 IELFKRNGGSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCLP  301 (365)
T ss_dssp             HHHHHHHSCEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHHHHHcCCEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCC
Confidence                         135678899999999742    42             222566554   57888877764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=95.76  E-value=0.0092  Score=55.11  Aligned_cols=57  Identities=14%  Similarity=0.176  Sum_probs=43.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----C---Hh------------hhccCCCEEEEecCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----N---PE------------QITSEADIVIAAAGVA  286 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----~---L~------------~~~~~ADIVIsAvG~p  286 (368)
                      +.+++|+|.|+++.+|+.++..|+++|++|+++.|...    .   +.            .-+.+.|+||.++|..
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~~   80 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASHK   80 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHTTEEEEEECCCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccccCCEEEECCccC
Confidence            56899999999999999999999999999999987543    1   11            0122689999888754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.75  E-value=0.0098  Score=54.83  Aligned_cols=38  Identities=16%  Similarity=0.063  Sum_probs=34.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+|+|.|+++-+|+.++..|+++|++|.++.+..
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~   62 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSI   62 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            36899999999988889999999999999999998763

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=95.75  E-value=0.0075  Score=56.29  Aligned_cols=37  Identities=24%  Similarity=0.286  Sum_probs=33.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~   62 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADID   62 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5899999999998888999999999999999999875

>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A

Probab=95.75  E-value=0.0098  Score=61.66  Aligned_cols=93  Identities=15%  Similarity=0.241  Sum_probs=76.6

Q ss_pred             CCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCC-----------------
Q 017679          214 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHAL-----------------  265 (368)
Q Consensus       214 cTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~-----------------  265 (368)
                      +|-.|++..|+-.+.+++..++|+.|+|.+ |..++.+|..    .|.       .+++|.++                 
T Consensus       264 V~lAgllnAlki~gk~l~d~riv~~GAGaA-g~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~  342 (555)
T 1gq2_A          264 VAVAGLLAALRITKNRLSDHTVLFQGAGEA-ALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHF  342 (555)
T ss_dssp             HHHHHHHHHHHHHTSCGGGCCEEEECCSHH-HHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGG
T ss_pred             HHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHH
Confidence            455788899999999999999999999988 9999999887    673       68999764                 


Q ss_pred             ------CCCHhhhcc--CCCEEEEecCCCCcccCCCcC------CCcEEEEeecCCC
Q 017679          266 ------TKNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV  308 (368)
Q Consensus       266 ------t~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~~  308 (368)
                            ..+|.+.++  ++|++|-..+.|+.+++|+++      +.-+|+=++ ||.
T Consensus       343 A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt  398 (555)
T 1gq2_A          343 AHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALS-NPT  398 (555)
T ss_dssp             CBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred             HhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence                  125788888  499999988889999999886      567887777 443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.74  E-value=0.009  Score=54.40  Aligned_cols=38  Identities=13%  Similarity=0.106  Sum_probs=34.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~   47 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN   47 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999999999999999999999999999775

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=95.74  E-value=0.0062  Score=59.28  Aligned_cols=71  Identities=11%  Similarity=0.122  Sum_probs=53.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-------CEEEEEeCCCC---------------------------------CHhhh
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHALTK---------------------------------NPEQI  272 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-------AtVti~h~~t~---------------------------------~L~~~  272 (368)
                      ++|.|||.|.+ |.+++..|++.|       .+|++++++..                                 ++.+.
T Consensus        22 ~kI~iIGaG~m-G~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea  100 (375)
T 1yj8_A           22 LKISILGSGNW-ASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV  100 (375)
T ss_dssp             BCEEEECCSHH-HHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred             CEEEEECcCHH-HHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence            47999999875 999999999988       89999977543                                 12344


Q ss_pred             ccCCCEEEEecCCCC---ccc--CC----CcCCCcEEEEee
Q 017679          273 TSEADIVIAAAGVAN---LVR--GS----WLKPGAVVLDVG  304 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~---~I~--~e----~ik~gavVIDvg  304 (368)
                      +++||+||.++....   .+.  ..    .++++.+||++.
T Consensus       101 ~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~  141 (375)
T 1yj8_A          101 INDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLT  141 (375)
T ss_dssp             HTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECC
T ss_pred             HcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeC
Confidence            678999999997432   111  23    678899999985

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.74  E-value=0.012  Score=55.73  Aligned_cols=57  Identities=14%  Similarity=0.141  Sum_probs=46.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------------------CHhhhccCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------------NPEQITSEA  276 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------------------~L~~~~~~A  276 (368)
                      ++++++|+|.|+++-+|+.++..|+++|++|+++.+...                                .+.+.++..
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            367899999999999999999999999999999876421                                133556788


Q ss_pred             CEEEEecCC
Q 017679          277 DIVIAAAGV  285 (368)
Q Consensus       277 DIVIsAvG~  285 (368)
                      |+||.++|.
T Consensus       104 d~vih~A~~  112 (352)
T 1sb8_A          104 DYVLHQAAL  112 (352)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCcc
Confidence            999988874

>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}

Probab=95.73  E-value=0.2  Score=48.83  Aligned_cols=165  Identities=10%  Similarity=0.024  Sum_probs=106.9

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCccee
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNI  199 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~  199 (368)
                      -.=..++.++|.++.+..|..+.+   -|-+.+.++-|+.-  +|+|.+--|  .|-....+.++.    +   +-.+|.
T Consensus        60 ~SFE~A~~~LGg~~i~~~l~~~ss~~kgEsl~DTarvls~~--~D~iviR~~--~~~~~~~lA~~~----~---vPVINa  128 (328)
T 3grf_A           60 VSLETAMTRLGGHAIYYELGANSNVGGKETVQDTAEVFSRM--VDICTARLA--TKEMMREMAQHA----S---VPCINA  128 (328)
T ss_dssp             HHHHHHHHHHTCEEEEEEC----------CHHHHHHHHTTT--CSEEEEECS--SHHHHHHHHHHC----S---SCEEES
T ss_pred             HHHHHHHHHCCCeEEccccCccccCCCCCCHHHHHHHHHhh--CCEEEEecC--ChhHHHHHHHhC----C---CCEEeC
Confidence            355778899999998855543211   24477777777764  789999866  222222222222    2   345564


Q ss_pred             eeccccCCcCccccCCHHH-HHHHHHHhC------CCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC------
Q 017679          200 GNLAMRGREPLFIPCTPKG-CIELLIRSG------VEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------  265 (368)
Q Consensus       200 G~L~~g~~~~~~~PcTa~g-v~~lL~~~~------i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~------  265 (368)
                      |       ...+.||=+.+ ++.+.++.|      ..++|++|++||-+ +.|.+.++..|...|++|+++.-.      
T Consensus       129 g-------~~~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p  201 (328)
T 3grf_A          129 L-------DDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKP  201 (328)
T ss_dssp             S-------CSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSC
T ss_pred             C-------CCCCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCC
Confidence            3       23567998888 556666665      27999999999987 678999999999999999998532      


Q ss_pred             -----------------------CCCHhhhccCCCEEEEe----cC-CC-----------Cc-ccCCCc---CCCcEEEE
Q 017679          266 -----------------------TKNPEQITSEADIVIAA----AG-VA-----------NL-VRGSWL---KPGAVVLD  302 (368)
Q Consensus       266 -----------------------t~~L~~~~~~ADIVIsA----vG-~p-----------~~-I~~e~i---k~gavVID  302 (368)
                                             +.++.+.+++||+|.+-    .| ..           .+ |+.+.+   +++++|.=
T Consensus       202 ~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH  281 (328)
T 3grf_A          202 IKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMN  281 (328)
T ss_dssp             CHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEEC
Confidence                                   13566788999999974    35 11           12 555543   57788877


Q ss_pred             eec
Q 017679          303 VGT  305 (368)
Q Consensus       303 vg~  305 (368)
                      ++-
T Consensus       282 ~lP  284 (328)
T 3grf_A          282 CLP  284 (328)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=95.73  E-value=0.0071  Score=55.45  Aligned_cols=38  Identities=16%  Similarity=0.183  Sum_probs=35.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   45 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK   45 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56899999999998888999999999999999999775

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=95.73  E-value=0.0096  Score=55.48  Aligned_cols=38  Identities=18%  Similarity=0.297  Sum_probs=34.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~   60 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN   60 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999998888999999999999999999775

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=95.72  E-value=0.01  Score=54.97  Aligned_cols=38  Identities=24%  Similarity=0.181  Sum_probs=34.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   42 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD   42 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999999989999999999999999998875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=95.72  E-value=0.0051  Score=54.99  Aligned_cols=57  Identities=21%  Similarity=0.209  Sum_probs=44.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------CHh---hhccCCCEEEEecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------NPE---QITSEADIVIAAAGV  285 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------~L~---~~~~~ADIVIsAvG~  285 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.+...       +++   +.+.+-|++|+.+|.
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~   69 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGS   69 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            468999999999888899999999999999999877531       122   223467999988884

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=95.71  E-value=0.014  Score=54.68  Aligned_cols=38  Identities=21%  Similarity=0.353  Sum_probs=34.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   80 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD   80 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999998888999999999999999998765

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=95.71  E-value=0.0099  Score=57.54  Aligned_cols=94  Identities=15%  Similarity=0.075  Sum_probs=61.3

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhc
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT  273 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~  273 (368)
                      +|.+..++..|.+..---.|++|+|+|+++.+|..+++++...|++|+.+.+..                   .++.+.+
T Consensus       145 ~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~  224 (362)
T 2c0c_A          145 LVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVL  224 (362)
T ss_dssp             TTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHH
T ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHH
Confidence            333344445554443334799999999766679999999999999988886542                   1222222


Q ss_pred             -----cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          274 -----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       274 -----~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                           ..+|+||.++|.+.+ ---+.++++-.++.+|..
T Consensus       225 ~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~  263 (362)
T 2c0c_A          225 KQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFI  263 (362)
T ss_dssp             HHHCTTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCG
T ss_pred             HHhcCCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCC
Confidence                 247999988886322 123456777777888864

>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A

Probab=95.71  E-value=0.0096  Score=60.59  Aligned_cols=124  Identities=15%  Similarity=0.090  Sum_probs=70.7

Q ss_pred             ccceEEEEccCccchHH-HHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCCC
Q 017679          231 MGKNAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCPV  308 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrp-la~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~~  308 (368)
                      ..|+|.|||-|++ |+. +|.+|.++|++|+++..+.....+.+++..|-|.. |.    .++.+. ...+|+--|+++.
T Consensus        21 ~~~~v~viGiG~s-G~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-g~----~~~~~~~~d~vV~Spgi~~~   94 (494)
T 4hv4_A           21 RVRHIHFVGIGGA-GMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYF-HH----RPENVLDASVVVVSTAISAD   94 (494)
T ss_dssp             -CCEEEEETTTST-THHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEES-SC----CGGGGTTCSEEEECTTSCTT
T ss_pred             cCCEEEEEEEcHh-hHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEEC-CC----CHHHcCCCCEEEECCCCCCC
Confidence            4689999999998 996 89999999999999987654333334333332221 21    111121 2344444444432


Q ss_pred             CCCCCCCCCCCcEEEcccchhh-hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          309 DVSVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       309 ~~~~d~t~~~~~kl~GDVd~~~-~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      .+....-.+.+-.+++++++-. ..+. ..+--|-|--|.-|+..|+.++++.+
T Consensus        95 ~p~~~~a~~~gi~v~~~~e~l~~~~~~-~~~IaVTGTnGKTTTt~ml~~iL~~~  147 (494)
T 4hv4_A           95 NPEIVAAREARIPVIRRAEMLAELMRY-RHGIAVAGTHGKTTTTAMLSSIYAEA  147 (494)
T ss_dssp             CHHHHHHHHTTCCEEEHHHHHHHHHTT-SEEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHCCCCEEcHHHHHHHHhcC-CCEEEEecCCChHHHHHHHHHHHHhc
Confidence            1000000001235788887522 2111 11124557888999999999998765

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=95.71  E-value=0.013  Score=54.32  Aligned_cols=39  Identities=26%  Similarity=0.307  Sum_probs=34.5

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~   64 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN   64 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            357899999999998888999999999999999988543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.71  E-value=0.01  Score=54.68  Aligned_cols=37  Identities=16%  Similarity=0.205  Sum_probs=33.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.|+|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~   43 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC   43 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence            5789999999998888999999999999999998764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.70  E-value=0.017  Score=55.91  Aligned_cols=54  Identities=28%  Similarity=0.456  Sum_probs=43.8

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      .++|+|||+|. +|.++|..|+..|. +|+++....                          .++ +.+++||+||.++|
T Consensus        14 ~~kI~ViGaG~-vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg   91 (328)
T 2hjr_A           14 RKKISIIGAGQ-IGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG   91 (328)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence            46899999965 59999999999987 888886542                          244 66899999999998


Q ss_pred             CCC
Q 017679          285 VAN  287 (368)
Q Consensus       285 ~p~  287 (368)
                      .|.
T Consensus        92 ~p~   94 (328)
T 2hjr_A           92 VPR   94 (328)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.67  E-value=0.0082  Score=54.82  Aligned_cols=39  Identities=31%  Similarity=0.301  Sum_probs=31.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~   43 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG   43 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch
Confidence            357899999999988889999999999999999998753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=95.67  E-value=0.0089  Score=55.57  Aligned_cols=56  Identities=14%  Similarity=0.189  Sum_probs=45.4

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------CCHhhhcc--CCCEEEEecCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------KNPEQITS--EADIVIAAAGVA  286 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------~~L~~~~~--~ADIVIsAvG~p  286 (368)
                      .+++|+|.|+++.+|+.++..|+++|++|+++.+..       .++.+.++  ..|+||.++|..
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   66 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKV   66 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence            468999999999999999999999999998876542       12445666  899999888754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.67  E-value=0.013  Score=53.70  Aligned_cols=56  Identities=13%  Similarity=0.167  Sum_probs=45.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC------Hhhhcc--CCCEEEEecCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------PEQITS--EADIVIAAAGVA  286 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~------L~~~~~--~ADIVIsAvG~p  286 (368)
                      .-++|+|.|++|.+|+.++..|+++|++|+++.|..-|      +.+.++  ..|+||..+|..
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            45899999999999999999999999999999876433      345566  699999888754

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.66  E-value=0.0086  Score=56.80  Aligned_cols=57  Identities=19%  Similarity=0.247  Sum_probs=45.4

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------CCHhhhcc--CCCEEE
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITS--EADIVI  280 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------~~L~~~~~--~ADIVI  280 (368)
                      ..++|+|+|++|.+|+.++..|++.|.+|+++.|..                            .++.+.++  .+|+||
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            467999999988899999999999999999998754                            12345667  899999


Q ss_pred             EecCCCC
Q 017679          281 AAAGVAN  287 (368)
Q Consensus       281 sAvG~p~  287 (368)
                      .++|..+
T Consensus        89 ~~a~~~n   95 (346)
T 3i6i_A           89 STVGGES   95 (346)
T ss_dssp             ECCCGGG
T ss_pred             ECCchhh
Confidence            8887643

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.66  E-value=0.012  Score=54.90  Aligned_cols=55  Identities=15%  Similarity=0.099  Sum_probs=44.3

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-C-----------------------------CHhhhccCCCEEEE
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K-----------------------------NPEQITSEADIVIA  281 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~-----------------------------~L~~~~~~ADIVIs  281 (368)
                      .++|+|+|+++.+|+.++..|+++|++|+++.|.. .                             ++.+.++.+|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            57899999988889999999999999999887763 0                             13456678899998


Q ss_pred             ecCCC
Q 017679          282 AAGVA  286 (368)
Q Consensus       282 AvG~p  286 (368)
                      ++|..
T Consensus        84 ~a~~~   88 (321)
T 3c1o_A           84 ALPFP   88 (321)
T ss_dssp             CCCGG
T ss_pred             CCCcc
Confidence            87743

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.65  E-value=0.0075  Score=55.06  Aligned_cols=37  Identities=19%  Similarity=0.232  Sum_probs=32.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..||+|+|.|+++-+|+.++..|+++|++|.++.++.
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~   56 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRE   56 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            4589999999998899999999999999999998764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.65  E-value=0.022  Score=54.87  Aligned_cols=57  Identities=14%  Similarity=0.046  Sum_probs=46.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~  285 (368)
                      +.++++|+|.|+++.+|+.++..|+++|++|+++.+...                     ++.+.++..|+||..+|.
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~  103 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD  103 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence            346789999999999999999999999999999877531                     134566789999988774

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.64  E-value=0.031  Score=53.85  Aligned_cols=93  Identities=15%  Similarity=0.201  Sum_probs=64.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC--------------------Hhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------------PEQ  271 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~--------------------L~~  271 (368)
                      +||....++..|++.++ -.|++|+|+|+| .||..+++++...|++|+.+.+....                    +.+
T Consensus       161 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG-~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~  238 (360)
T 1piw_A          161 LLCGGLTVYSPLVRNGC-GPGKKVGIVGLG-GIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGE  238 (360)
T ss_dssp             GGTHHHHHHHHHHHTTC-STTCEEEEECCS-HHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHH
T ss_pred             hhhhHHHHHHHHHHcCC-CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHH
Confidence            46655556666666443 369999999995 56999999999999998888754322                    212


Q ss_pred             hc-cCCCEEEEecCC--CCccc--CCCcCCCcEEEEeecC
Q 017679          272 IT-SEADIVIAAAGV--ANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~~-~~ADIVIsAvG~--p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      .+ ..+|+||.++|.  +..+.  -+.++++..++.+|..
T Consensus       239 ~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~  278 (360)
T 1piw_A          239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIP  278 (360)
T ss_dssp             HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCC
T ss_pred             HhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCC
Confidence            22 357999999987  55442  3567888788888753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=95.63  E-value=0.016  Score=56.02  Aligned_cols=96  Identities=22%  Similarity=0.208  Sum_probs=65.8

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQ  271 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~  271 (368)
                      .+||....++..|.+..---.|++|+|+|.| .||..+++++...|++|+++.+..                   .++.+
T Consensus       169 ~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G-~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~  247 (363)
T 3uog_A          169 TLPCAGLTAWFALVEKGHLRAGDRVVVQGTG-GVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVE  247 (363)
T ss_dssp             TTTTHHHHHHHHHTTTTCCCTTCEEEEESSB-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHH
T ss_pred             hcccHHHHHHHHHHHhcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHH
Confidence            3566666666666443333479999999955 569999999999999988876542                   22222


Q ss_pred             h----c--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecCC
Q 017679          272 I----T--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       272 ~----~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~  307 (368)
                      .    +  +.+|+||.++|.+.+ -.-+.++++-.++.+|...
T Consensus       248 ~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~  290 (363)
T 3uog_A          248 RVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLE  290 (363)
T ss_dssp             HHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCS
T ss_pred             HHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCC
Confidence            2    2  258999999984433 2335678888888888653

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=95.63  E-value=0.016  Score=53.79  Aligned_cols=38  Identities=24%  Similarity=0.218  Sum_probs=34.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   64 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT   64 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH
Confidence            46899999999998888999999999999999998754

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.63  E-value=0.013  Score=49.40  Aligned_cols=55  Identities=16%  Similarity=0.224  Sum_probs=42.4

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------------CHhh-hccCCCEEEEecC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------NPEQ-ITSEADIVIAAAG  284 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------------~L~~-~~~~ADIVIsAvG  284 (368)
                      ..++++|+|.|. +|+.++..|.+.|..|+++.+...                         .+.+ .+.+||.||.+++
T Consensus         2 ~~~~vlI~G~G~-vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            2 RKDHFIVCGHSI-LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CCSCEEEECCSH-HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCCcEEEECCCH-HHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            357899999876 599999999999999999977521                         0222 2678899999887


Q ss_pred             CC
Q 017679          285 VA  286 (368)
Q Consensus       285 ~p  286 (368)
                      ..
T Consensus        81 ~d   82 (153)
T 1id1_A           81 ND   82 (153)
T ss_dssp             CH
T ss_pred             Ch
Confidence            54

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.62  E-value=0.015  Score=56.48  Aligned_cols=77  Identities=10%  Similarity=0.012  Sum_probs=55.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC------------------CCCHhhhc-----cCCCEEEEecCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL------------------TKNPEQIT-----SEADIVIAAAGVA  286 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~------------------t~~L~~~~-----~~ADIVIsAvG~p  286 (368)
                      -.|++|+|+|+++.||..+++++...|++|+...+.                  ..++.+.+     ..+|+||.++|.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~  242 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV  242 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCch
Confidence            579999999997778999999999999987765321                  12332222     2389999999986


Q ss_pred             Cccc--CCCc-CCCcEEEEeecC
Q 017679          287 NLVR--GSWL-KPGAVVLDVGTC  306 (368)
Q Consensus       287 ~~I~--~e~i-k~gavVIDvg~n  306 (368)
                      ..+.  -+.+ ++|-.++.+|..
T Consensus       243 ~~~~~~~~~l~~~~G~iv~~g~~  265 (371)
T 3gqv_A          243 ESTTFCFAAIGRAGGHYVSLNPF  265 (371)
T ss_dssp             HHHHHHHHHSCTTCEEEEESSCC
T ss_pred             HHHHHHHHHhhcCCCEEEEEecC
Confidence            5432  3456 577788888854

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.61  E-value=0.024  Score=52.80  Aligned_cols=37  Identities=19%  Similarity=0.048  Sum_probs=32.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+|+|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   44 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS   44 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3578999999998889999999999999999987653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.61  E-value=0.0088  Score=54.21  Aligned_cols=36  Identities=22%  Similarity=0.326  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r   39 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR   39 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence            468999999999999999999999999999999887

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.61  E-value=0.012  Score=53.49  Aligned_cols=38  Identities=21%  Similarity=0.330  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++ |.++.++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~   40 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE   40 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc
Confidence            478999999999988999999999999995 88887653

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.60  E-value=0.013  Score=54.06  Aligned_cols=37  Identities=22%  Similarity=-0.024  Sum_probs=33.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++|+++|.|+++-+|+.++..|+++|++|.++.+..
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   39 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT   39 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            5789999999988889999999999999999998764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.60  E-value=0.011  Score=54.86  Aligned_cols=54  Identities=11%  Similarity=0.183  Sum_probs=40.3

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhcc--CCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITS--EADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~--~ADIVIsAvG~  285 (368)
                      ||+|+|.|+++-+|+.++..|+++|++|+++.+..             ..+.+.++  +.|+||.++|.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence            68999999999999999999999999999887532             12334454  48999988874

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.59  E-value=0.028  Score=54.94  Aligned_cols=35  Identities=17%  Similarity=0.330  Sum_probs=31.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      +++++|+|||.|++ |.+++..|+..|. ++++++..
T Consensus       116 L~~~~VlvvG~Ggl-Gs~va~~La~aGvg~i~lvD~D  151 (353)
T 3h5n_A          116 LKNAKVVILGCGGI-GNHVSVILATSGIGEIILIDND  151 (353)
T ss_dssp             HHTCEEEEECCSHH-HHHHHHHHHHHTCSEEEEEECC
T ss_pred             HhCCeEEEECCCHH-HHHHHHHHHhCCCCeEEEECCC
Confidence            57899999999996 9999999999996 89998653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.58  E-value=0.013  Score=54.63  Aligned_cols=36  Identities=22%  Similarity=0.140  Sum_probs=32.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +||+|+|.|+++-+|+.++..|+++|++|+++.+..
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~   37 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRS   37 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCC
Confidence            689999999988899999999999999999987753

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=95.57  E-value=0.0041  Score=58.41  Aligned_cols=38  Identities=24%  Similarity=0.274  Sum_probs=35.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++|+||.++|-|++.-+|+.+|..|+++||+|.++.++
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~   42 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIR   42 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            47999999999998888999999999999999999775

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.56  E-value=0.0077  Score=55.98  Aligned_cols=38  Identities=24%  Similarity=0.203  Sum_probs=34.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~   59 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTD   59 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999998888999999999999999998764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.55  E-value=0.013  Score=54.36  Aligned_cols=37  Identities=16%  Similarity=0.201  Sum_probs=34.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r   47 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI   47 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence            4689999999999888899999999999999999876

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.54  E-value=0.01  Score=52.94  Aligned_cols=36  Identities=22%  Similarity=0.251  Sum_probs=32.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~   39 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDE   39 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            578999999999999999999999999999998753

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.52  E-value=0.02  Score=55.26  Aligned_cols=53  Identities=21%  Similarity=0.332  Sum_probs=42.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ++|+|||+|. ||.+++..|+..|. +|.++....                          .++ +.+++||+||.++|.
T Consensus         5 ~kI~VIGaG~-vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~   82 (322)
T 1t2d_A            5 AKIVLVGSGM-IGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGF   82 (322)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSC
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence            5899999965 69999999999986 888876432                          244 668999999999987


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        83 p~   84 (322)
T 1t2d_A           83 TK   84 (322)
T ss_dssp             SS
T ss_pred             CC
Confidence            63

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.52  E-value=0.011  Score=53.63  Aligned_cols=36  Identities=31%  Similarity=0.351  Sum_probs=33.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r   36 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYA   36 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            368999999999988999999999999999999877

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=95.51  E-value=0.0095  Score=55.47  Aligned_cols=37  Identities=22%  Similarity=0.162  Sum_probs=31.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++.||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   61 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR   61 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            4689999999998888999999999999999999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=95.51  E-value=0.017  Score=55.04  Aligned_cols=93  Identities=16%  Similarity=0.110  Sum_probs=64.5

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI  272 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~  272 (368)
                      +||....++..|+..++ -.|++|+|+|+|+ ||..+++++...|++|+.+.+..                   .++.+.
T Consensus       148 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~  225 (340)
T 3s2e_A          148 ILCAGVTVYKGLKVTDT-RPGQWVVISGIGG-LGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAW  225 (340)
T ss_dssp             GGTHHHHHHHHHHTTTC-CTTSEEEEECCST-THHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHH
T ss_pred             ccchhHHHHHHHHHcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHH
Confidence            46665666666754432 4699999999876 69999999999999998886532                   233222


Q ss_pred             cc----CCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679          273 TS----EADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ~~----~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      ++    .+|+||.++|.+..+.  -+.++++-.++.+|..
T Consensus       226 ~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~  265 (340)
T 3s2e_A          226 LQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLP  265 (340)
T ss_dssp             HHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred             HHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCC
Confidence            22    5788888887665432  3467787788888864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.50  E-value=0.023  Score=52.86  Aligned_cols=37  Identities=19%  Similarity=0.174  Sum_probs=33.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.+
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~   61 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGI   61 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence            4578999999999888899999999999999999875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=95.50  E-value=0.0069  Score=58.48  Aligned_cols=93  Identities=24%  Similarity=0.189  Sum_probs=61.7

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHh---
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE---  270 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~---  270 (368)
                      ||....++..|.+..---.|++|+|+|+++.+|..+++++...|++|+.+.+..                   .++.   
T Consensus       152 ~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~  231 (351)
T 1yb5_A          152 GIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKI  231 (351)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHH
T ss_pred             hhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHH
Confidence            444444555554332224699999999966679999999999999998886542                   1211   


Q ss_pred             -hhcc--CCCEEEEecCCCCcc-cCCCcCCCcEEEEeec
Q 017679          271 -QITS--EADIVIAAAGVANLV-RGSWLKPGAVVLDVGT  305 (368)
Q Consensus       271 -~~~~--~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~  305 (368)
                       +.+.  ..|+||.++|.+.+- .-+.++++-.++.+|.
T Consensus       232 ~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~  270 (351)
T 1yb5_A          232 KKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGS  270 (351)
T ss_dssp             HHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCC
T ss_pred             HHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEec
Confidence             1121  579999888865331 2345677777788884

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.49  E-value=0.019  Score=53.45  Aligned_cols=38  Identities=24%  Similarity=0.295  Sum_probs=34.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~   58 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFG   58 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            36889999999998888999999999999999998773

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.49  E-value=0.012  Score=52.36  Aligned_cols=55  Identities=24%  Similarity=0.324  Sum_probs=42.9

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------CHhhhcc------CCCEEEEecCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITS------EADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~L~~~~~------~ADIVIsAvG~  285 (368)
                      .||+++|.|+++-+|+.++..|+++|++|.++.+...               ++.+.+.      ..|+||..+|.
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~   76 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV   76 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccc
Confidence            3789999999999999999999999999999887532               1223333      56999988774

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=95.49  E-value=0.0089  Score=55.38  Aligned_cols=39  Identities=18%  Similarity=0.181  Sum_probs=32.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +.++.||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   49 (266)
T 3p19_A           11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR   49 (266)
T ss_dssp             ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            345789999999998888999999999999999999875

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=95.49  E-value=0.0093  Score=60.62  Aligned_cols=71  Identities=13%  Similarity=0.245  Sum_probs=53.8

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------CCHhhhcc---CCCEEEEecCCCCc
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------KNPEQITS---EADIVIAAAGVANL  288 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------~~L~~~~~---~ADIVIsAvG~p~~  288 (368)
                      +|.|||.|.+ |.+++..|.+.|.+|++++++.                      .++++.+.   ++|+||.+++.+..
T Consensus         3 kIgVIG~G~m-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~   81 (478)
T 1pgj_A            3 DVGVVGLGVM-GANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA   81 (478)
T ss_dssp             SEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred             EEEEEChHHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence            6999999875 9999999999999999998752                      13444444   49999999987532


Q ss_pred             ----cc--CCCcCCCcEEEEeec
Q 017679          289 ----VR--GSWLKPGAVVLDVGT  305 (368)
Q Consensus       289 ----I~--~e~ik~gavVIDvg~  305 (368)
                          +.  ...+++|.+|||++.
T Consensus        82 v~~vl~~l~~~l~~g~iIId~sn  104 (478)
T 1pgj_A           82 TDSTIEQLKKVFEKGDILVDTGN  104 (478)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCC
T ss_pred             HHHHHHHHHhhCCCCCEEEECCC
Confidence                21  134678999999874

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.49  E-value=0.016  Score=53.64  Aligned_cols=38  Identities=26%  Similarity=0.273  Sum_probs=34.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~   61 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS   61 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56899999999998888999999999999999988763

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.48  E-value=0.0087  Score=55.95  Aligned_cols=37  Identities=32%  Similarity=0.431  Sum_probs=33.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   41 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN   41 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            5789999999998888999999999999999998765

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.48  E-value=0.023  Score=54.66  Aligned_cols=95  Identities=11%  Similarity=0.057  Sum_probs=61.3

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC----------------------
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN----------------------  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~----------------------  268 (368)
                      .+||.+..++..|.+..---.|.+|+|+|+++.||..+++++...||+|+++-+..++                      
T Consensus       147 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~  226 (357)
T 1zsy_A          147 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL  226 (357)
T ss_dssp             HTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH
T ss_pred             hhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcc
Confidence            3455555566666554333479999999996778999999998899976655432211                      


Q ss_pred             ----Hhhhcc---CCCEEEEecCCCCcc-cCCCcCCCcEEEEeec
Q 017679          269 ----PEQITS---EADIVIAAAGVANLV-RGSWLKPGAVVLDVGT  305 (368)
Q Consensus       269 ----L~~~~~---~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~  305 (368)
                          +.+.+.   .+|+||.++|.+... .-+.++++-.++.+|.
T Consensus       227 ~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~  271 (357)
T 1zsy_A          227 RRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGG  271 (357)
T ss_dssp             HSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCEEEECCC
T ss_pred             hHHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCEEEEEec
Confidence                111121   368888888765432 2356777777777764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=95.48  E-value=0.014  Score=52.92  Aligned_cols=36  Identities=17%  Similarity=0.115  Sum_probs=32.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~   37 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY   37 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            579999999988889999999999999999998763

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=95.47  E-value=0.011  Score=49.46  Aligned_cols=55  Identities=13%  Similarity=0.106  Sum_probs=42.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------C---Hhh-hccCCCEEEEecCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------N---PEQ-ITSEADIVIAAAGVAN  287 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------~---L~~-~~~~ADIVIsAvG~p~  287 (368)
                      .++++|+|.|.+ |+.++..|.+.|..|+++.++..                  +   |.+ .+.+||+||.+++...
T Consensus         7 ~~~viIiG~G~~-G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~   83 (140)
T 3fwz_A            7 CNHALLVGYGRV-GSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY   83 (140)
T ss_dssp             CSCEEEECCSHH-HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred             CCCEEEECcCHH-HHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence            357999999875 99999999999999999987531                  1   222 2578999999988643

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.46  E-value=0.014  Score=53.92  Aligned_cols=37  Identities=16%  Similarity=0.220  Sum_probs=33.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.+
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r   43 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI   43 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence            3689999999999888899999999999999999876

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=95.46  E-value=0.028  Score=52.00  Aligned_cols=52  Identities=19%  Similarity=0.246  Sum_probs=43.8

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC--------HhhhccCCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------PEQITSEADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~--------L~~~~~~ADIVIsAvG~  285 (368)
                      ||+|.|++|.+|+.++..|.++|.+|+++.|+...        ..+.+..+|.||..+|.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla~~   61 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLAGE   61 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccCCCEEEEeccC
Confidence            69999999999999999999999999999886421        23557899999987764

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.46  E-value=0.021  Score=52.92  Aligned_cols=33  Identities=15%  Similarity=0.073  Sum_probs=30.3

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ||+|+|.|+++-+|+.++..|+++|++|+++.|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r   33 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIR   33 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEe
Confidence            689999999999999999999999999998765

>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*

Probab=95.44  E-value=0.0094  Score=62.26  Aligned_cols=92  Identities=8%  Similarity=0.117  Sum_probs=76.3

Q ss_pred             CCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCC-----------------
Q 017679          214 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHAL-----------------  265 (368)
Q Consensus       214 cTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~-----------------  265 (368)
                      +|-.|++..|+-.+.+++..++|+.|+|.+ |..+|.+|..    .|.       .+++|.++                 
T Consensus       302 V~lAgllnAlki~gk~l~d~riv~~GAGaA-gigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~  380 (605)
T 1o0s_A          302 VIVAGLLTCTRVTKKLVSQEKYLFFGAGAA-STGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQF  380 (605)
T ss_dssp             HHHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTT
T ss_pred             HHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHH
Confidence            455788999999999999999999999988 9999999887    784       58999764                 


Q ss_pred             ------CCCHhhhcc--CCCEEEEecCCCCcccCCCcC------CCcEEEEeecCC
Q 017679          266 ------TKNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCP  307 (368)
Q Consensus       266 ------t~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~  307 (368)
                            ..+|.+.++  ++|++|-..+.|+.+++|+|+      +.-+|+=++ ||
T Consensus       381 A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NP  435 (605)
T 1o0s_A          381 AKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALS-NP  435 (605)
T ss_dssp             CBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECC-SS
T ss_pred             HhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CC
Confidence                  125788888  499999988889999999886      567887776 44

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=95.43  E-value=0.015  Score=57.01  Aligned_cols=57  Identities=9%  Similarity=0.293  Sum_probs=43.9

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCC-----------------------CCCHhhhccCCCEEEEecC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHAL-----------------------TKNPEQITSEADIVIAAAG  284 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~-----------------------t~~L~~~~~~ADIVIsAvG  284 (368)
                      +.++||+|||++|.||.+++..|+.+|.  +|.++...                       +.++.+.+++||+||.++|
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG   85 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG   85 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence            3578999999855579999998888873  78887643                       1356678999999999999


Q ss_pred             CC
Q 017679          285 VA  286 (368)
Q Consensus       285 ~p  286 (368)
                      .|
T Consensus        86 ~p   87 (343)
T 3fi9_A           86 AP   87 (343)
T ss_dssp             --
T ss_pred             CC
Confidence            65

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.43  E-value=0.021  Score=51.92  Aligned_cols=39  Identities=10%  Similarity=-0.043  Sum_probs=33.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCC---CEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~g---AtVti~h~~t  266 (368)
                      .++++|+++|.|+++-+|+.++..|+++|   ++|+++.+..
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~   58 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR   58 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecCh
Confidence            35789999999999999999999999999   9999988764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=95.43  E-value=0.014  Score=54.61  Aligned_cols=38  Identities=21%  Similarity=0.228  Sum_probs=32.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   61 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRT   61 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998888999999999999999999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.40  E-value=0.0096  Score=56.39  Aligned_cols=89  Identities=13%  Similarity=0.077  Sum_probs=60.2

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhh----hc
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQ----IT  273 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~----~~  273 (368)
                      ..++..|.+..---.|++|+|+|+++.+|..++.++...|++|+++.++.                   .+..+    .+
T Consensus       126 ~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  205 (327)
T 1qor_A          126 LTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEIT  205 (327)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred             HHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHh
Confidence            33445554332223699999999766679999999999999998886542                   12211    11


Q ss_pred             --cCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          274 --SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       274 --~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                        ...|+||.++| +..+  --+.++++-.++.+|..
T Consensus       206 ~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~  241 (327)
T 1qor_A          206 GGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNS  241 (327)
T ss_dssp             TTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCT
T ss_pred             CCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecC
Confidence              24799999998 3333  23567888788888864

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.39  E-value=0.015  Score=53.67  Aligned_cols=55  Identities=13%  Similarity=0.170  Sum_probs=43.9

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------------------CHhhhccCCCEEEE
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------------------NPEQITSEADIVIA  281 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------------------~L~~~~~~ADIVIs  281 (368)
                      .++|+|+|+++.+|+.++..|+++|.+|+++.|...                              .+.+.++.+|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            578999999888899999999999999998877521                              13455677899998


Q ss_pred             ecCCC
Q 017679          282 AAGVA  286 (368)
Q Consensus       282 AvG~p  286 (368)
                      ++|..
T Consensus        84 ~a~~~   88 (308)
T 1qyc_A           84 TVGSL   88 (308)
T ss_dssp             CCCGG
T ss_pred             CCcch
Confidence            87754

>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*

Probab=95.38  E-value=0.013  Score=60.28  Aligned_cols=74  Identities=22%  Similarity=0.156  Sum_probs=56.2

Q ss_pred             Ccc-ceEEEEccCccchHHHHHHHhhC------CCEEEEEeCCC-------------------CCHhhhccCCCEEEEec
Q 017679          230 IMG-KNAVVIGRSNIVGLPTSLLLQRH------HATVSIVHALT-------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       230 l~G-K~VvVIG~g~~VGrpla~lL~~~------gAtVti~h~~t-------------------~~L~~~~~~ADIVIsAv  283 (368)
                      ++| |+|.|||.|.+ |.++|..|.+.      |..|++..+..                   .++.+.+++||+||.++
T Consensus        51 L~GiKkIgIIGlGsM-G~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV  129 (525)
T 3fr7_A           51 FKGIKQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI  129 (525)
T ss_dssp             TTTCSEEEEECCTTH-HHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred             hcCCCEEEEEeEhHH-HHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence            789 99999999986 99999999998      98888775542                   23567788999999999


Q ss_pred             CCC---Cccc--CCCcCCCcEEEEee
Q 017679          284 GVA---NLVR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       284 G~p---~~I~--~e~ik~gavVIDvg  304 (368)
                      +..   .++.  ...+++|++|+...
T Consensus       130 P~~~~~eVl~eI~p~LK~GaILs~Aa  155 (525)
T 3fr7_A          130 SDAAQADNYEKIFSHMKPNSILGLSH  155 (525)
T ss_dssp             CHHHHHHHHHHHHHHSCTTCEEEESS
T ss_pred             ChHHHHHHHHHHHHhcCCCCeEEEeC
Confidence            732   2332  23468898866553

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=95.36  E-value=0.0069  Score=58.11  Aligned_cols=92  Identities=12%  Similarity=-0.038  Sum_probs=61.2

Q ss_pred             cCCHHHHHHHHHHhCCCCcc-ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhh
Q 017679          213 PCTPKGCIELLIRSGVEIMG-KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQI  272 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~G-K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~  272 (368)
                      ||.+..++.+++..+  ..| +.|+|.|.++.+|..+++++...||+|+.+.+...                   ++.+.
T Consensus       147 ~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~  224 (349)
T 3pi7_A          147 IVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEAT  224 (349)
T ss_dssp             SHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHH
T ss_pred             cccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHH
Confidence            444444445555444  445 67777766666799999999999999988865421                   22222


Q ss_pred             c------cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          273 T------SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ~------~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                      +      +..|+||.++|.+.+- --+.++++-.++.+|..
T Consensus       225 v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~  265 (349)
T 3pi7_A          225 LREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRL  265 (349)
T ss_dssp             HHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCS
T ss_pred             HHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEecc
Confidence            2      3689999999976541 23467888888889854

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=95.36  E-value=0.035  Score=49.55  Aligned_cols=35  Identities=23%  Similarity=0.163  Sum_probs=32.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~   35 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARS   35 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            47899999998888999999999999999998775

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.36  E-value=0.029  Score=50.01  Aligned_cols=54  Identities=20%  Similarity=0.212  Sum_probs=43.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC--------------Hhhhcc----CCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------PEQITS----EADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~--------------L~~~~~----~ADIVIsAvG~p  286 (368)
                      |+|+|.|+++-+|+.++..|+++|++|+++.+....              +.+.++    ..|+||..+|..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            679999998889999999999999999999876421              223333    789999888753

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.35  E-value=0.021  Score=53.31  Aligned_cols=55  Identities=11%  Similarity=0.143  Sum_probs=43.7

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------------CHhhhccCCCEEEEecCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------NPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------------~L~~~~~~ADIVIsAvG~p  286 (368)
                      .|+|+|+|+++-+|+.++..|+++|++|+++.|...                         ++.+.++.+|+||.++|..
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            368999999888899999999999999998877642                         1335567788888877743

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.35  E-value=0.021  Score=54.48  Aligned_cols=54  Identities=19%  Similarity=0.316  Sum_probs=43.1

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      .++|.|||+|. +|.+++..|+..|. +|+++.+..                          .++ +.+++||+||.++|
T Consensus         4 ~~kI~VIGaG~-~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg   81 (317)
T 2ewd_A            4 RRKIAVIGSGQ-IGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS   81 (317)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred             CCEEEEECCCH-HHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence            46899999976 59999999999887 999886542                          233 45789999999998


Q ss_pred             CCC
Q 017679          285 VAN  287 (368)
Q Consensus       285 ~p~  287 (368)
                      .|.
T Consensus        82 ~p~   84 (317)
T 2ewd_A           82 IPG   84 (317)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.35  E-value=0.02  Score=54.32  Aligned_cols=58  Identities=17%  Similarity=0.303  Sum_probs=41.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCCC--------------------Hhhhcc-----CCCEEEEe
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTKN--------------------PEQITS-----EADIVIAA  282 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~~--------------------L~~~~~-----~ADIVIsA  282 (368)
                      ++++++|+|.|+++.+|+.++..|+++| ++|+++.+....                    +.+.++     +.|+||..
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            3678999999999999999999999999 899998765321                    123344     58999988


Q ss_pred             cCCC
Q 017679          283 AGVA  286 (368)
Q Consensus       283 vG~p  286 (368)
                      +|..
T Consensus       123 A~~~  126 (357)
T 2x6t_A          123 GACS  126 (357)
T ss_dssp             CSCC
T ss_pred             Cccc
Confidence            8743

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=95.35  E-value=0.017  Score=53.24  Aligned_cols=38  Identities=29%  Similarity=0.276  Sum_probs=33.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~   51 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN   51 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            35899999999999888999999999999999987553

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=95.35  E-value=0.014  Score=53.41  Aligned_cols=39  Identities=15%  Similarity=0.092  Sum_probs=34.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~   41 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG   41 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            357899999999998889999999999999999998764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=95.34  E-value=0.0087  Score=56.71  Aligned_cols=38  Identities=24%  Similarity=0.225  Sum_probs=35.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..|+||.++|-|+|.-+|+.+|..|+++||+|.++.++
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~   62 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR   62 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            45899999999998888999999999999999999876

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.33  E-value=0.023  Score=51.97  Aligned_cols=53  Identities=9%  Similarity=-0.007  Sum_probs=42.3

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhh----------------ccCCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI----------------TSEADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~----------------~~~ADIVIsAvG~  285 (368)
                      .++|+|.|+ |.+|+.++..|+++|.+|+.+.|........                +.++|+||.++|.
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~   73 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAP   73 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCc
Confidence            478999998 6779999999999999999998875332211                5678999988764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=95.32  E-value=0.029  Score=51.83  Aligned_cols=53  Identities=21%  Similarity=0.135  Sum_probs=41.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC--------------------HhhhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------------PEQITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~--------------------L~~~~~~ADIVIsAvG~p  286 (368)
                      ++|+|.|+++-+|+.++..|+++|++|+++.+....                    +.+.++. |+||..+|.+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCC
Confidence            579999999999999999999999999998764321                    2233444 8999887754

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=95.31  E-value=0.012  Score=56.06  Aligned_cols=94  Identities=13%  Similarity=-0.022  Sum_probs=60.3

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhh
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQ  271 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~  271 (368)
                      +|....++..|.+..---.|++|+|+|+++.+|..++.++...|++|+++.+...                     ++.+
T Consensus       137 ~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~  216 (345)
T 2j3h_A          137 GMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTA  216 (345)
T ss_dssp             SHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHH
T ss_pred             cccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHH
Confidence            4433444555533322346999999998666799999999999999988865421                     1111


Q ss_pred             hc-----cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          272 IT-----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~~-----~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      .+     ...|+||.++|.+.+ -.-+.++++-.++.+|..
T Consensus       217 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~  257 (345)
T 2j3h_A          217 ALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMI  257 (345)
T ss_dssp             HHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCG
T ss_pred             HHHHHhCCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEccc
Confidence            11     136888888876422 123567777777777754

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=95.31  E-value=0.011  Score=57.07  Aligned_cols=94  Identities=14%  Similarity=0.078  Sum_probs=61.9

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHh---
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE---  270 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~---  270 (368)
                      ||....++..|.+..---.|++|+|+|+++.+|..++.++...|++|+++.+..                   .+..   
T Consensus       144 ~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  223 (354)
T 2j8z_A          144 PEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEAT  223 (354)
T ss_dssp             HHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHH
Confidence            333333444443222223699999999766679999999999999998886542                   1221   


Q ss_pred             -hhc--cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          271 -QIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 -~~~--~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                       +.+  ...|+||.++|.+.+- .-+.++++..++.+|..
T Consensus       224 ~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~  263 (354)
T 2j8z_A          224 LKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM  263 (354)
T ss_dssp             HHHTTTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCCT
T ss_pred             HHHhcCCCceEEEECCCchHHHHHHHhccCCCEEEEEecc
Confidence             112  2579999999976431 23567788788888864

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=95.31  E-value=0.019  Score=52.52  Aligned_cols=53  Identities=13%  Similarity=0.183  Sum_probs=44.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC------Hhhhcc--CCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------PEQITS--EADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~------L~~~~~--~ADIVIsAvG~p  286 (368)
                      +|+|.|+++.+|+.++..|+++|++|+++.|..-|      +.+.++  ..|+||..+|..
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   67 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYT   67 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCccc
Confidence            89999999999999999999999999999886533      344555  599999888754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=95.31  E-value=0.013  Score=54.66  Aligned_cols=39  Identities=23%  Similarity=0.364  Sum_probs=35.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~   66 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHS   66 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            368999999999988889999999999999999998763

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.30  E-value=0.032  Score=54.10  Aligned_cols=39  Identities=18%  Similarity=0.241  Sum_probs=35.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   79 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTA   79 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECCh
Confidence            468999999999988889999999999999999998764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.29  E-value=0.017  Score=55.40  Aligned_cols=58  Identities=14%  Similarity=0.095  Sum_probs=47.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhC-CC-EEEEEeCCCC-------------------------CHhhhccCCCEEEE
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALTK-------------------------NPEQITSEADIVIA  281 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~-gA-tVti~h~~t~-------------------------~L~~~~~~ADIVIs  281 (368)
                      .++||+|+|.|+++.+|+.++..|+++ |+ +|+++.|...                         .+.+.++..|+||.
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            368999999999999999999999999 97 9999877521                         23456678999998


Q ss_pred             ecCCC
Q 017679          282 AAGVA  286 (368)
Q Consensus       282 AvG~p  286 (368)
                      ++|..
T Consensus        98 ~Aa~~  102 (344)
T 2gn4_A           98 AAALK  102 (344)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            88754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=95.28  E-value=0.034  Score=50.10  Aligned_cols=35  Identities=23%  Similarity=0.204  Sum_probs=32.1

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~   36 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNP   36 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            78999999999999999999999999999988763

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.27  E-value=0.011  Score=56.41  Aligned_cols=57  Identities=14%  Similarity=0.219  Sum_probs=44.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCCC-----------------------HhhhccCCCEEEEecC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTKN-----------------------PEQITSEADIVIAAAG  284 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~~-----------------------L~~~~~~ADIVIsAvG  284 (368)
                      .+.+|+|+|.|+++.+|+.++..|+++ |++|+++.+....                       +.+.++.+|+||..+|
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~  100 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA  100 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence            357899999999999999999999998 8999999875421                       2345567899997776


Q ss_pred             C
Q 017679          285 V  285 (368)
Q Consensus       285 ~  285 (368)
                      .
T Consensus       101 ~  101 (372)
T 3slg_A          101 I  101 (372)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=95.26  E-value=0.016  Score=53.85  Aligned_cols=36  Identities=22%  Similarity=0.102  Sum_probs=31.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   57 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD   57 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            579999999998888999999999999999999875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.26  E-value=0.028  Score=50.68  Aligned_cols=54  Identities=15%  Similarity=0.197  Sum_probs=42.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC--------------HhhhccC----CCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------PEQITSE----ADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~--------------L~~~~~~----ADIVIsAvG~p  286 (368)
                      |+++|.|+++-+|+.++..|+++|++|+++.++...              +.+.+++    -|+||+.+|..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            679999999889999999999999999999876421              2334444    49999888854

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.25  E-value=0.016  Score=53.81  Aligned_cols=38  Identities=26%  Similarity=0.204  Sum_probs=34.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   61 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATT   61 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999998888999999999999999998775

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.25  E-value=0.017  Score=53.63  Aligned_cols=38  Identities=18%  Similarity=0.132  Sum_probs=34.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~   77 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT   77 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC
Confidence            45789999999999999999999999999999998754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=95.25  E-value=0.012  Score=53.87  Aligned_cols=37  Identities=19%  Similarity=0.305  Sum_probs=33.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   38 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL   38 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999998888999999999999999998775

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.22  E-value=0.03  Score=54.34  Aligned_cols=55  Identities=22%  Similarity=0.274  Sum_probs=44.0

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEec
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAv  283 (368)
                      +.++|.|||+|. ||.+++..|+..|. +|+++....                          .+. +.+++||+||.++
T Consensus         6 ~~~kI~viGaG~-vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa   83 (324)
T 3gvi_A            6 ARNKIALIGSGM-IGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA   83 (324)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred             cCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence            457999999966 59999999998887 888886532                          233 6789999999999


Q ss_pred             CCCC
Q 017679          284 GVAN  287 (368)
Q Consensus       284 G~p~  287 (368)
                      |.|.
T Consensus        84 g~p~   87 (324)
T 3gvi_A           84 GVPR   87 (324)
T ss_dssp             SCCC
T ss_pred             CcCC
Confidence            9653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.21  E-value=0.019  Score=51.58  Aligned_cols=35  Identities=23%  Similarity=0.239  Sum_probs=31.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~   35 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLS   35 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            37899999998889999999999999999998775

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=95.21  E-value=0.022  Score=53.41  Aligned_cols=59  Identities=15%  Similarity=0.375  Sum_probs=46.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCC-------CEEEEEeCCCC---------------------CHhhhc-cCCCE
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHALTK---------------------NPEQIT-SEADI  278 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~g-------AtVti~h~~t~---------------------~L~~~~-~~ADI  278 (368)
                      ..++|++|+|.|+++-+|+.++..|+++|       ++|+++.+...                     .+.+.+ ...|+
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            45789999999998889999999999999       78998876431                     123445 47999


Q ss_pred             EEEecCCC
Q 017679          279 VIAAAGVA  286 (368)
Q Consensus       279 VIsAvG~p  286 (368)
                      ||..+|..
T Consensus        90 vih~A~~~   97 (342)
T 2hrz_A           90 IFHLAAIV   97 (342)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99888743

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.21  E-value=0.026  Score=53.36  Aligned_cols=37  Identities=32%  Similarity=0.223  Sum_probs=33.3

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++|++|+|.|+++-+|+.++..|+++|++|+++.+..
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   43 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA   43 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCC
Confidence            4689999999999999999999999999999987753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=95.20  E-value=0.014  Score=54.41  Aligned_cols=38  Identities=24%  Similarity=0.216  Sum_probs=34.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.|+
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~   49 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRD   49 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            46899999999998888999999999999999999875

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.19  E-value=0.032  Score=52.20  Aligned_cols=35  Identities=26%  Similarity=0.304  Sum_probs=31.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++|+|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~   38 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNL   38 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence            47899999999989999999999999999998764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=95.19  E-value=0.0073  Score=58.05  Aligned_cols=94  Identities=14%  Similarity=0.056  Sum_probs=59.1

Q ss_pred             cCCHHHHHHHHHHhCCCCcc--ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC--------------------CH
Q 017679          213 PCTPKGCIELLIRSGVEIMG--KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK--------------------NP  269 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~G--K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~--------------------~L  269 (368)
                      ||....++..|.+..---.|  ++|+|.|+++.+|..++.++...|+ +|+++.+...                    ++
T Consensus       140 ~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~  219 (357)
T 2zb4_A          140 GMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNV  219 (357)
T ss_dssp             SHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCH
T ss_pred             ccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHH
Confidence            33334445555333222368  9999999966679999999999999 9988866421                    11


Q ss_pred             hhhcc-----CCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          270 EQITS-----EADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       270 ~~~~~-----~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      .+.++     ..|+||.++|...+ -.-+.++++-.++.+|..
T Consensus       220 ~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~  262 (357)
T 2zb4_A          220 AEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQI  262 (357)
T ss_dssp             HHHHHHHCTTCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCG
T ss_pred             HHHHHHhcCCCCCEEEECCCHHHHHHHHHHhccCcEEEEECCc
Confidence            11111     36888888875222 122456777677777754

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.19  E-value=0.019  Score=49.99  Aligned_cols=55  Identities=11%  Similarity=0.045  Sum_probs=42.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCCC-----------CHh--hhccC--CCEEEEecCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK-----------NPE--QITSE--ADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t~-----------~L~--~~~~~--ADIVIsAvG~  285 (368)
                      .+|+|+|.|+++-+|+.++..|+++|+  +|+++.|+..           |+.  +.+.+  .|+||.++|.
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~   75 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGT   75 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhhhcEEEECeee
Confidence            478999999999999999999999998  9998876532           221  11222  7999988874

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.18  E-value=0.017  Score=52.12  Aligned_cols=37  Identities=24%  Similarity=0.193  Sum_probs=29.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||.++|.|+++-+|+.++..|++ |+.|.++.+..
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~   38 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP   38 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCH
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCH
Confidence            46899999999998899999999987 89999988764

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=95.17  E-value=0.071  Score=50.66  Aligned_cols=71  Identities=21%  Similarity=0.281  Sum_probs=51.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      .+|+|||.|.+ |..++..|.+.|.+|+++.|..                           .+..+..+.+|+||.++..
T Consensus         3 mkI~IiGaGai-G~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~   81 (320)
T 3i83_A            3 LNILVIGTGAI-GSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV   81 (320)
T ss_dssp             CEEEEESCCHH-HHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence            58999999875 9999999999999999987642                           1222333489999999975


Q ss_pred             CCc---cc--CCCcCCCcEEEEee
Q 017679          286 ANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       286 p~~---I~--~e~ik~gavVIDvg  304 (368)
                      ..+   +.  ...++++.+||.+-
T Consensus        82 ~~~~~~l~~l~~~l~~~t~Iv~~~  105 (320)
T 3i83_A           82 VEGADRVGLLRDAVAPDTGIVLIS  105 (320)
T ss_dssp             CTTCCHHHHHTTSCCTTCEEEEEC
T ss_pred             CChHHHHHHHHhhcCCCCEEEEeC
Confidence            442   11  24567788887763

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=95.16  E-value=0.0094  Score=57.19  Aligned_cols=95  Identities=16%  Similarity=0.124  Sum_probs=62.8

Q ss_pred             ccCCHHHHHHHHHH-hCCCC-----ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------------C
Q 017679          212 IPCTPKGCIELLIR-SGVEI-----MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------K  267 (368)
Q Consensus       212 ~PcTa~gv~~lL~~-~~i~l-----~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------------~  267 (368)
                      +||+.......|.+ .++..     .|++|+|+|+++.||..+++++...|++|+.+.++.                  .
T Consensus       125 ~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~  204 (346)
T 3fbg_A          125 LPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE  204 (346)
T ss_dssp             SHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS
T ss_pred             cchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc
Confidence            35544445555533 33322     699999997666679999999999999999887642                  1


Q ss_pred             CHhhhc-----cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679          268 NPEQIT-----SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       268 ~L~~~~-----~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      ++.+.+     +..|+||.++|.+..+.  -+.++++-.++.+|..
T Consensus       205 ~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~  250 (346)
T 3fbg_A          205 SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF  250 (346)
T ss_dssp             CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC
T ss_pred             cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence            222222     24799999998765432  3567777777777643

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.15  E-value=0.023  Score=52.49  Aligned_cols=40  Identities=28%  Similarity=0.372  Sum_probs=36.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++..
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~   41 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAV   41 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCS
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccch
Confidence            4689999999999988999999999999999999988753

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=95.15  E-value=0.0089  Score=57.24  Aligned_cols=53  Identities=26%  Similarity=0.308  Sum_probs=45.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC-EEEEEeC-CC-CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA-LT-KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~-~t-~~L~~~~~~ADIVIsAvG~  285 (368)
                      ++|+|.|++|.+|+.++..|+++|. +|+.+.+ .. .++.+.++++|+||.++|.
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~   56 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGV   56 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcC
Confidence            3799999999999999999999998 9999988 33 3567778899999988874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=95.15  E-value=0.024  Score=53.19  Aligned_cols=37  Identities=14%  Similarity=0.186  Sum_probs=33.0

Q ss_pred             CCccceEEEEccCcc--chHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNI--VGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~--VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-  +|+.++..|+++|++|.++.++
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~   66 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG   66 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence            589999999998754  6999999999999999998765

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=95.15  E-value=0.027  Score=52.88  Aligned_cols=38  Identities=21%  Similarity=0.252  Sum_probs=33.1

Q ss_pred             CCCccceEEEEccCc--cchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~--~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++  -+|+.++..|+++|++|.++.+.
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~   65 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS   65 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence            457899999999873  45999999999999999998775

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=95.14  E-value=0.011  Score=54.30  Aligned_cols=37  Identities=32%  Similarity=0.340  Sum_probs=34.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   41 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN   41 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999998888999999999999999999876

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.13  E-value=0.011  Score=53.24  Aligned_cols=38  Identities=18%  Similarity=0.237  Sum_probs=34.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~   44 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDRE   44 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999999875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.12  E-value=0.0085  Score=56.61  Aligned_cols=92  Identities=23%  Similarity=0.201  Sum_probs=58.9

Q ss_pred             CCHHHHHHHHHHhCCCCc-cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhh--c-----------------
Q 017679          214 CTPKGCIELLIRSGVEIM-GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI--T-----------------  273 (368)
Q Consensus       214 cTa~gv~~lL~~~~i~l~-GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~--~-----------------  273 (368)
                      +|++..+..+++.++... |+ |+|+|+++.||..+++++...|++|+.+.+...+++..  +                 
T Consensus       129 ~ta~~al~~~~~~~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~  207 (324)
T 3nx4_A          129 FTAMLCVMALEDAGIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPL  207 (324)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSS
T ss_pred             HHHHHHHHHhhhcccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhh
Confidence            355555565666665543 45 99999977789999999999999998887654322110  0                 


Q ss_pred             --cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          274 --SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       274 --~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                        ...|++|.++|.+.+ -.-+.++++-.++.+|..
T Consensus       208 ~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~  243 (324)
T 3nx4_A          208 EKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLA  243 (324)
T ss_dssp             CCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCT
T ss_pred             cCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecC
Confidence              135666666665422 123456676677777754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.12  E-value=0.017  Score=52.13  Aligned_cols=38  Identities=18%  Similarity=0.285  Sum_probs=34.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.|..
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~   48 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA   48 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcc
Confidence            57899999999999999999999999999999998753

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=95.11  E-value=0.022  Score=53.40  Aligned_cols=38  Identities=21%  Similarity=0.258  Sum_probs=34.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~   82 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP   82 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35799999999998888999999999999999988654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=95.11  E-value=0.034  Score=53.76  Aligned_cols=95  Identities=18%  Similarity=0.186  Sum_probs=62.5

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------C
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------N  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------~  268 (368)
                      .+||.....+..+.+..---.|++|+|+|+|. ||..+++++...|+ +|+.+.+...                     +
T Consensus       172 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~  250 (374)
T 1cdo_A          172 LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEP  250 (374)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSC
T ss_pred             hhccHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchh
Confidence            34554444444443332234699999999764 69999999999999 7888754321                     2


Q ss_pred             Hhhhcc-----CCCEEEEecCCCCcc--cCCCcCCC-cEEEEeecC
Q 017679          269 PEQITS-----EADIVIAAAGVANLV--RGSWLKPG-AVVLDVGTC  306 (368)
Q Consensus       269 L~~~~~-----~ADIVIsAvG~p~~I--~~e~ik~g-avVIDvg~n  306 (368)
                      +.+.++     .+|+||.++|.+..+  --+.++++ -.++.+|..
T Consensus       251 ~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  296 (374)
T 1cdo_A          251 ISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWT  296 (374)
T ss_dssp             HHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             HHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCC
Confidence            222222     479999999876543  23577887 778888864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=95.10  E-value=0.02  Score=54.80  Aligned_cols=93  Identities=16%  Similarity=0.107  Sum_probs=61.5

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHh---
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE---  270 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~---  270 (368)
                      ||....++..|.+..---.|++|+|+|+++.+|..++.++...|++|+.+.+..                   .++.   
T Consensus       148 ~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~  227 (343)
T 2eih_A          148 PLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEV  227 (343)
T ss_dssp             HHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHH
T ss_pred             hhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHH
Confidence            333334445554432223699999999966679999999999999998876532                   1221   


Q ss_pred             -hhc--cCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          271 -QIT--SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 -~~~--~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                       +.+  ...|+||.++| +..+  --+.++++-.++.+|..
T Consensus       228 ~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~  267 (343)
T 2eih_A          228 RRLTGGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGAS  267 (343)
T ss_dssp             HHHTTTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCC
T ss_pred             HHHhCCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecC
Confidence             222  25799999998 4433  23456777788888864

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.08  E-value=0.024  Score=55.13  Aligned_cols=57  Identities=18%  Similarity=0.305  Sum_probs=44.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-----------------------CCHhhhccCCCEEEEec
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-----------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-----------------------~~L~~~~~~ADIVIsAv  283 (368)
                      +-.+++|+|||+|. ||.+++..|+..+.  ++.++....                       .+..+.+++||+||.++
T Consensus         6 ~~~~~kV~ViGaG~-vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~a   84 (326)
T 3vku_A            6 DKDHQKVILVGDGA-VGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITA   84 (326)
T ss_dssp             -CCCCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECC
T ss_pred             cCCCCEEEEECCCH-HHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECC
Confidence            45678999999876 59999999998875  788886531                       12246789999999999


Q ss_pred             CCC
Q 017679          284 GVA  286 (368)
Q Consensus       284 G~p  286 (368)
                      |.|
T Consensus        85 g~~   87 (326)
T 3vku_A           85 GAP   87 (326)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            865

>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*

Probab=95.07  E-value=0.017  Score=60.04  Aligned_cols=92  Identities=13%  Similarity=0.205  Sum_probs=75.4

Q ss_pred             CCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCC--------C--------
Q 017679          214 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHAL--------T--------  266 (368)
Q Consensus       214 cTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~--------t--------  266 (368)
                      +|-.|++..|+-.+.+++..++|+.|+|.+ |..++.+|..    .|.       .+++|.++        .        
T Consensus       266 V~lAgllnAlki~gk~l~d~riv~~GAGaA-gigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~  344 (564)
T 1pj3_A          266 VALAGLLAAQKVISKPISEHKILFLGAGEA-ALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEP  344 (564)
T ss_dssp             HHHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGG
T ss_pred             HHHHHHHHHHHHhCCcHhHcEEEEeCCCHH-HHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHH
Confidence            455788999999999999999999999988 9999999886    783       58999753        0        


Q ss_pred             ----------CCHhhhcc--CCCEEEEecCCCCcccCCCcC------CCcEEEEeecCC
Q 017679          267 ----------KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCP  307 (368)
Q Consensus       267 ----------~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~  307 (368)
                                .+|.+.++  ++|++|-..+.|+.+++|+++      +.-+|+=++ ||
T Consensus       345 ~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NP  402 (564)
T 1pj3_A          345 FTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS-NP  402 (564)
T ss_dssp             GCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECC-SS
T ss_pred             HHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-CC
Confidence                      24777888  699999988889999999885      467887776 44

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=95.07  E-value=0.012  Score=54.08  Aligned_cols=38  Identities=32%  Similarity=0.289  Sum_probs=34.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   41 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD   41 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999998888999999999999999999775

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.06  E-value=0.022  Score=54.06  Aligned_cols=37  Identities=19%  Similarity=0.235  Sum_probs=33.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~   60 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG   60 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence            5789999999998888999999999999999998764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.06  E-value=0.014  Score=52.97  Aligned_cols=37  Identities=16%  Similarity=0.226  Sum_probs=33.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   38 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE   38 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999998889999999999999999999875

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=95.06  E-value=0.025  Score=57.19  Aligned_cols=68  Identities=22%  Similarity=0.259  Sum_probs=51.1

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------------------------CHhhhccCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------------------------NPEQITSEA  276 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------------------------~L~~~~~~A  276 (368)
                      ++|.|||.|.+ |.++|..|++.|.+|++++++..                                    ++ +.+++|
T Consensus        38 ~kV~VIGaG~M-G~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a  115 (463)
T 1zcj_A           38 SSVGVLGLGTM-GRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV  115 (463)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence            68999999875 99999999999999999976421                                    22 346789


Q ss_pred             CEEEEecCCCCcccC-------CCcCCCcEEEE
Q 017679          277 DIVIAAAGVANLVRG-------SWLKPGAVVLD  302 (368)
Q Consensus       277 DIVIsAvG~p~~I~~-------e~ik~gavVID  302 (368)
                      |+||.|++...-++.       ..++++++|++
T Consensus       116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s  148 (463)
T 1zcj_A          116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT  148 (463)
T ss_dssp             SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence            999999975311111       24678999887

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.05  E-value=0.01  Score=54.76  Aligned_cols=39  Identities=23%  Similarity=0.217  Sum_probs=35.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~   64 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA   64 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence            357999999999998899999999999999999998764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.04  E-value=0.0064  Score=60.36  Aligned_cols=72  Identities=18%  Similarity=0.249  Sum_probs=52.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC---CEEEEEeCCCC----------------------------CHhhhccC--CCEE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALTK----------------------------NPEQITSE--ADIV  279 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g---AtVti~h~~t~----------------------------~L~~~~~~--ADIV  279 (368)
                      ++|+|+|+|+ +|+.++..|+++|   ..|+++.++..                            ++.+.+++  +|+|
T Consensus         2 ~kVlIiGaGg-iG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGAGG-VGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            5899999976 5999999999988   48999987521                            13344555  8999


Q ss_pred             EEecCCCC-c-ccCCCcCCCcEEEEeec
Q 017679          280 IAAAGVAN-L-VRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       280 IsAvG~p~-~-I~~e~ik~gavVIDvg~  305 (368)
                      |+++|... . +-...++.|.-++|++.
T Consensus        81 in~ag~~~~~~v~~a~l~~g~~vvD~a~  108 (405)
T 4ina_A           81 LNIALPYQDLTIMEACLRTGVPYLDTAN  108 (405)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred             EECCCcccChHHHHHHHHhCCCEEEecC
Confidence            99987421 1 33345667888999743

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=95.03  E-value=0.012  Score=53.04  Aligned_cols=37  Identities=19%  Similarity=0.280  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~   47 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT   47 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence            5789999999998888999999999999999999775

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=95.02  E-value=0.019  Score=53.33  Aligned_cols=64  Identities=11%  Similarity=0.183  Sum_probs=48.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCc---cc--CCCcCCCcEEEEee
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~---I~--~e~ik~gavVIDvg  304 (368)
                      .+|.|||.|.+ |.+++..|.+.|.+|+.+++.     +.+++||  |.+++...+   +.  ...+++|++|+|+.
T Consensus         7 mkI~IIG~G~~-G~sLA~~L~~~G~~V~~~~~~-----~~~~~aD--ilavP~~ai~~vl~~l~~~l~~g~ivvd~s   75 (232)
T 3dfu_A            7 LRVGIFDDGSS-TVNMAEKLDSVGHYVTVLHAP-----EDIRDFE--LVVIDAHGVEGYVEKLSAFARRGQMFLHTS   75 (232)
T ss_dssp             CEEEEECCSCC-CSCHHHHHHHTTCEEEECSSG-----GGGGGCS--EEEECSSCHHHHHHHHHTTCCTTCEEEECC
T ss_pred             cEEEEEeeCHH-HHHHHHHHHHCCCEEEEecCH-----HHhccCC--EEEEcHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence            58999999886 999999999999999988773     3378899  555654322   21  23678999999974

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.01  E-value=0.0097  Score=54.75  Aligned_cols=38  Identities=21%  Similarity=0.371  Sum_probs=34.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   43 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS   43 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999998888999999999999999999775

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=94.99  E-value=0.019  Score=55.85  Aligned_cols=87  Identities=29%  Similarity=0.413  Sum_probs=61.2

Q ss_pred             HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC-------------------CCCHhhhcc----
Q 017679          219 CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL-------------------TKNPEQITS----  274 (368)
Q Consensus       219 v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~-------------------t~~L~~~~~----  274 (368)
                      ++..++..++ -.|++|+|+|+|. ||..+++++...|+ +|+++.+.                   ..++.+.++    
T Consensus       171 a~~~l~~~~~-~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~  248 (370)
T 4ej6_A          171 CLHGVDLSGI-KAGSTVAILGGGV-IGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVG  248 (370)
T ss_dssp             HHHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTS
T ss_pred             HHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhh
Confidence            3444554444 3699999999864 69999999999999 88877543                   123444443    


Q ss_pred             ----CCCEEEEecCCCCccc--CCCcCCCcEEEEeecCC
Q 017679          275 ----EADIVIAAAGVANLVR--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       275 ----~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n~  307 (368)
                          .+|+||.++|.+..+.  -+.+++|-.++.+|...
T Consensus       249 ~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~  287 (370)
T 4ej6_A          249 LVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLP  287 (370)
T ss_dssp             SSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCC
T ss_pred             ccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccC
Confidence                3799999999765432  35678888888888653

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=94.98  E-value=0.043  Score=51.68  Aligned_cols=36  Identities=19%  Similarity=0.213  Sum_probs=31.7

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++++|+|.|+++.+|+.++..|+++|++|+++.+.
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   60 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   60 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            578999999999999999999999999999998764

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=94.98  E-value=0.036  Score=52.99  Aligned_cols=53  Identities=21%  Similarity=0.371  Sum_probs=41.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ++|+|||+|. ||.+++..|+..|. +|.++....                          .++ +.+++||+||.++|.
T Consensus         3 ~kI~VIGaG~-vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~   80 (309)
T 1ur5_A            3 KKISIIGAGF-VGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA   80 (309)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence            5899999965 69999999999885 877776432                          244 568999999999987


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        81 p~   82 (309)
T 1ur5_A           81 PR   82 (309)
T ss_dssp             --
T ss_pred             CC
Confidence            63

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=94.98  E-value=0.026  Score=53.24  Aligned_cols=92  Identities=13%  Similarity=0.124  Sum_probs=58.3

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhh---------------hccCC
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQ---------------ITSEA  276 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~---------------~~~~A  276 (368)
                      +||....++..|+ ..---.|++|+|+|+ +.||..+++++...||+|+.+. ...+++.               .-..+
T Consensus       124 l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~  200 (315)
T 3goh_A          124 LPCPLLTAWQAFE-KIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKY  200 (315)
T ss_dssp             SHHHHHHHHHHHT-TSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCE
T ss_pred             CccHHHHHHHHHh-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCc
Confidence            3454455566663 333347999999999 5579999999999999988877 3333221               01457


Q ss_pred             CEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679          277 DIVIAAAGVANLV-RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       277 DIVIsAvG~p~~I-~~e~ik~gavVIDvg~n  306 (368)
                      |+||.++|.+.+- .-+.++++-.++.+|..
T Consensus       201 Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~  231 (315)
T 3goh_A          201 FAIFDAVNSQNAAALVPSLKANGHIICIQDR  231 (315)
T ss_dssp             EEEECC-------TTGGGEEEEEEEEEECCC
T ss_pred             cEEEECCCchhHHHHHHHhcCCCEEEEEeCC
Confidence            9999999876552 23567888778888754

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=94.98  E-value=0.038  Score=53.43  Aligned_cols=94  Identities=16%  Similarity=0.140  Sum_probs=61.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------CH
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------NP  269 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------~L  269 (368)
                      +||.....+..+.+..---.|++|+|+|+|. ||..+++++...|+ +|+.+.+...                     ++
T Consensus       172 l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~  250 (373)
T 1p0f_A          172 IGCGFATGYGAAVNTAKVTPGSTCAVFGLGG-VGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPI  250 (373)
T ss_dssp             GGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCH
T ss_pred             hhhHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchH
Confidence            3444344444443332234699999999865 69999999988998 7887754321                     22


Q ss_pred             hhhcc-----CCCEEEEecCCCCcc--cCCCcCCC-cEEEEeecC
Q 017679          270 EQITS-----EADIVIAAAGVANLV--RGSWLKPG-AVVLDVGTC  306 (368)
Q Consensus       270 ~~~~~-----~ADIVIsAvG~p~~I--~~e~ik~g-avVIDvg~n  306 (368)
                      .+.++     .+|+||.++|.+..+  --+.++++ -.++.+|..
T Consensus       251 ~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  295 (373)
T 1p0f_A          251 YEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLA  295 (373)
T ss_dssp             HHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCC
T ss_pred             HHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccC
Confidence            22222     479999999876543  23577887 788888864

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.98  E-value=0.026  Score=52.19  Aligned_cols=55  Identities=11%  Similarity=0.106  Sum_probs=43.8

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------------CHhhhccCCCEEEEe
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVIAA  282 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------------~L~~~~~~ADIVIsA  282 (368)
                      .++|+|+|+++.+|+.++..|+++|++|+++.|...                             ++.+.++.+|+||.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            478999999888999999999999999999877521                             134556778888887


Q ss_pred             cCCC
Q 017679          283 AGVA  286 (368)
Q Consensus       283 vG~p  286 (368)
                      +|..
T Consensus        84 a~~~   87 (313)
T 1qyd_A           84 LAGG   87 (313)
T ss_dssp             CCCS
T ss_pred             Cccc
Confidence            7743

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=94.97  E-value=0.013  Score=54.36  Aligned_cols=38  Identities=21%  Similarity=0.174  Sum_probs=34.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   44 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN   44 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999889999999999999999999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=94.97  E-value=0.033  Score=53.81  Aligned_cols=95  Identities=17%  Similarity=0.163  Sum_probs=62.6

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------C
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------N  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------~  268 (368)
                      .+||.....+..+.+..---.|++|+|+|+|. ||..+++++...|+ +|+.+.+...                     +
T Consensus       171 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~  249 (374)
T 2jhf_A          171 LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGG-VGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKP  249 (374)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSC
T ss_pred             hhccHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchh
Confidence            34554444444443332234699999999765 69999999999999 8888754321                     1


Q ss_pred             Hhhhcc-----CCCEEEEecCCCCcc--cCCCcCCC-cEEEEeecC
Q 017679          269 PEQITS-----EADIVIAAAGVANLV--RGSWLKPG-AVVLDVGTC  306 (368)
Q Consensus       269 L~~~~~-----~ADIVIsAvG~p~~I--~~e~ik~g-avVIDvg~n  306 (368)
                      +.+.++     .+|+||.++|.+..+  --+.++++ -.++.+|..
T Consensus       250 ~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  295 (374)
T 2jhf_A          250 IQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVP  295 (374)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCC
T ss_pred             HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccC
Confidence            222222     479999999876543  23567887 788888864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=94.95  E-value=0.015  Score=54.85  Aligned_cols=39  Identities=15%  Similarity=0.299  Sum_probs=35.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~   75 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP   75 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            568999999999988889999999999999999998764

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=94.95  E-value=0.015  Score=53.00  Aligned_cols=37  Identities=22%  Similarity=0.224  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   45 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRN   45 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999998888999999999999999999775

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=94.95  E-value=0.021  Score=54.67  Aligned_cols=71  Identities=17%  Similarity=0.238  Sum_probs=52.9

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ..+|.|||.|.+ |..++..|++.|.+|+++.+..                          .+..+ +..+|+||.++..
T Consensus         3 ~mkI~IiGaG~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~   80 (335)
T 3ghy_A            3 LTRICIVGAGAV-GGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA   80 (335)
T ss_dssp             CCCEEEESCCHH-HHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred             CCEEEEECcCHH-HHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence            368999999875 9999999999999999997631                          13333 5789999999975


Q ss_pred             CCc---cc--CCCcCCCcEEEEee
Q 017679          286 ANL---VR--GSWLKPGAVVLDVG  304 (368)
Q Consensus       286 p~~---I~--~e~ik~gavVIDvg  304 (368)
                      ..+   +.  ...++++.+||.+-
T Consensus        81 ~~~~~~~~~l~~~l~~~~~iv~~~  104 (335)
T 3ghy_A           81 PALESVAAGIAPLIGPGTCVVVAM  104 (335)
T ss_dssp             HHHHHHHGGGSSSCCTTCEEEECC
T ss_pred             hhHHHHHHHHHhhCCCCCEEEEEC
Confidence            432   21  24567888888764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=94.94  E-value=0.035  Score=52.09  Aligned_cols=36  Identities=19%  Similarity=0.102  Sum_probs=30.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||+|+|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~   38 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRD   38 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence            368999999999999999999999999999876654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=94.94  E-value=0.036  Score=51.35  Aligned_cols=59  Identities=15%  Similarity=0.146  Sum_probs=43.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------C------HhhhccC--CCEEEEecCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------N------PEQITSE--ADIVIAAAGVA  286 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------~------L~~~~~~--ADIVIsAvG~p  286 (368)
                      ..-+-++|+|.|+++-+|+.++..|+++|++|+++.+...           |      +.+.++.  .|+||..+|..
T Consensus         8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   85 (321)
T 2pk3_A            8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS   85 (321)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred             cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence            3456789999999999999999999999999999887532           1      2334443  79999888743

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=94.94  E-value=0.034  Score=51.51  Aligned_cols=39  Identities=13%  Similarity=0.139  Sum_probs=33.5

Q ss_pred             CCCccceEEEEccCcc--chHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNI--VGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~--VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      -.++||.|+|.|+++.  +|+.++..|+++|++|.++.+..
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~   62 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ   62 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence            3578999999997643  69999999999999999987764

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=94.94  E-value=0.026  Score=54.77  Aligned_cols=95  Identities=15%  Similarity=0.183  Sum_probs=64.1

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------C
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------N  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------~  268 (368)
                      .+||.....+..+.+..---.|.+|+|+|+|. ||..+++++...|+ +|+.+.+...                     +
T Consensus       173 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~  251 (378)
T 3uko_A          173 LLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGT-VGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKP  251 (378)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCCEEEECCSH-HHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSC
T ss_pred             hhhhhHHHHHHHHHhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchh
Confidence            34555444555443333334699999999965 69999999999999 7888764321                     2


Q ss_pred             Hhhhcc-----CCCEEEEecCCCCcc--cCCCcCCC-cEEEEeecC
Q 017679          269 PEQITS-----EADIVIAAAGVANLV--RGSWLKPG-AVVLDVGTC  306 (368)
Q Consensus       269 L~~~~~-----~ADIVIsAvG~p~~I--~~e~ik~g-avVIDvg~n  306 (368)
                      +.+.++     .+|+||.++|.+..+  --+.+++| -.++.+|..
T Consensus       252 ~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~  297 (378)
T 3uko_A          252 IQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA  297 (378)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             HHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEccc
Confidence            222222     389999999986553  24578885 788888864

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.93  E-value=0.041  Score=50.78  Aligned_cols=53  Identities=19%  Similarity=0.122  Sum_probs=42.9

Q ss_pred             cceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCCC-----------------------HhhhccCCCEEEEecC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTKN-----------------------PEQITSEADIVIAAAG  284 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~~-----------------------L~~~~~~ADIVIsAvG  284 (368)
                      .|+|+|.|+++.+|+.++..|+++| ++|+++.|....                       +.+.++.+|+||..+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            5889999998889999999999988 899998876321                       3345677888887766

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=94.92  E-value=0.041  Score=55.43  Aligned_cols=52  Identities=21%  Similarity=0.332  Sum_probs=44.2

Q ss_pred             ccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeC
Q 017679          212 IPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA  264 (368)
Q Consensus       212 ~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~  264 (368)
                      .+.|.+|++..    +++.+.+++||+|+|.|.|++ |..++.+|.+.|++|. ++.+
T Consensus       194 ~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnV-G~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          194 DDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQV-GAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEEET
T ss_pred             ccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEEcC
Confidence            36888887655    566899999999999998875 9999999999999877 7766

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=94.90  E-value=0.033  Score=53.73  Aligned_cols=95  Identities=16%  Similarity=0.148  Sum_probs=62.8

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------C
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------N  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------~  268 (368)
                      .+||.....+..+.+..---.|++|+|+|+|. ||..+++++...|+ +|+.+.+...                     +
T Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~  248 (373)
T 2fzw_A          170 LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGG-VGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKP  248 (373)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSC
T ss_pred             hhccHHHHHHHHHHhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccccc
Confidence            34554444444443332234699999999865 69999999998999 7887754321                     2


Q ss_pred             Hhhhcc-----CCCEEEEecCCCCcc--cCCCcCCC-cEEEEeecC
Q 017679          269 PEQITS-----EADIVIAAAGVANLV--RGSWLKPG-AVVLDVGTC  306 (368)
Q Consensus       269 L~~~~~-----~ADIVIsAvG~p~~I--~~e~ik~g-avVIDvg~n  306 (368)
                      +.+.++     .+|+||.++|.+..+  --+.++++ -.++.+|..
T Consensus       249 ~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  294 (373)
T 2fzw_A          249 IQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA  294 (373)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             HHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecC
Confidence            222222     479999999875543  23577888 788888864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=94.88  E-value=0.0073  Score=57.96  Aligned_cols=94  Identities=20%  Similarity=0.118  Sum_probs=61.0

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------CCHhhhc-
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------KNPEQIT-  273 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------~~L~~~~-  273 (368)
                      +||....++..|.+..---.|++|+|+|+++.+|..+++++...|++|+.+ ...                 .++.+.+ 
T Consensus       131 l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~  209 (343)
T 3gaz_A          131 LPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAA  209 (343)
T ss_dssp             SHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHH
T ss_pred             hhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHH
Confidence            354444455555222223369999999976667999999999999998887 321                 1222221 


Q ss_pred             -----cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          274 -----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       274 -----~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                           +.+|+||.++|.+.+ -.-+.++++-.++.+|..
T Consensus       210 ~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~  248 (343)
T 3gaz_A          210 EHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGW  248 (343)
T ss_dssp             HHHTTSCEEEEEESSCTHHHHHHHHHEEEEEEEEESCCC
T ss_pred             HHhcCCCceEEEECCCcHHHHHHHHHHhcCCeEEEEccc
Confidence                 258999999986433 123467777777777754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=94.86  E-value=0.017  Score=53.41  Aligned_cols=39  Identities=21%  Similarity=0.236  Sum_probs=35.1

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~   54 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN   54 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            457899999999999889999999999999999998775

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=94.86  E-value=0.016  Score=53.83  Aligned_cols=37  Identities=16%  Similarity=0.229  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   38 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKS   38 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            4789999999998888999999999999999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=94.84  E-value=0.013  Score=53.60  Aligned_cols=37  Identities=19%  Similarity=0.196  Sum_probs=34.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   39 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT   39 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999998888999999999999999999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=94.84  E-value=0.04  Score=53.28  Aligned_cols=94  Identities=18%  Similarity=0.195  Sum_probs=62.0

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------C
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------N  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------~  268 (368)
                      .+||.....+..+.+..---.|++|+|+|+|. ||..+++++...|+ +|+.+.+...                     +
T Consensus       175 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~  253 (376)
T 1e3i_A          175 LIGCGFSSGYGAAINTAKVTPGSTCAVFGLGC-VGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKP  253 (376)
T ss_dssp             GGGTHHHHHHHHHHTTSCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSC
T ss_pred             hhccHHHHHHHHHHHhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccch
Confidence            34554444444443332234699999999765 69999999999999 8887754321                     2


Q ss_pred             Hhhhcc-----CCCEEEEecCCCCcc--cCCCcCCC-cEEEEeec
Q 017679          269 PEQITS-----EADIVIAAAGVANLV--RGSWLKPG-AVVLDVGT  305 (368)
Q Consensus       269 L~~~~~-----~ADIVIsAvG~p~~I--~~e~ik~g-avVIDvg~  305 (368)
                      +.+.++     .+|+||.++|.+..+  --+.++++ -.++-+|.
T Consensus       254 ~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          254 VQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             HHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred             HHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECC
Confidence            222222     479999999875543  23567887 77888886

>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*

Probab=94.83  E-value=0.024  Score=56.55  Aligned_cols=37  Identities=24%  Similarity=0.329  Sum_probs=33.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+|+|||.|+. |...+.+|.++|++|+.+.++.
T Consensus         2 ~~~~~~v~viG~G~~-G~~~a~~l~~~G~~v~~~D~~~   38 (439)
T 2x5o_A            2 DYQGKNVVIIGLGLT-GLSCVDFFLARGVTPRVMDTRM   38 (439)
T ss_dssp             CCTTCCEEEECCHHH-HHHHHHHHHTTTCCCEEEESSS
T ss_pred             CCCCCEEEEEeecHH-HHHHHHHHHhCCCEEEEEECCC
Confidence            468999999999998 9999999999999999998764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=94.83  E-value=0.017  Score=52.62  Aligned_cols=54  Identities=19%  Similarity=0.193  Sum_probs=44.5

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------CHhhhccCCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------~L~~~~~~ADIVIsAvG~  285 (368)
                      +|+|+|.|+++-+|+.++..|+++|++|+++.|...                  .+.+.++..|+||..+|.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence            478999999888999999999999999998876531                  244567789999988874

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=94.83  E-value=0.034  Score=53.20  Aligned_cols=51  Identities=16%  Similarity=0.314  Sum_probs=41.4

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ||+|||+|. +|.+++..|+..|.  +|+++.+..                          .+ .+.+++||+||.++|.
T Consensus         2 kI~ViGaG~-vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~   79 (294)
T 1oju_A            2 KLGFVGAGR-VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL   79 (294)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred             EEEEECCCH-HHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence            799999966 59999999988886  888886431                          24 6778999999999996


Q ss_pred             C
Q 017679          286 A  286 (368)
Q Consensus       286 p  286 (368)
                      |
T Consensus        80 ~   80 (294)
T 1oju_A           80 A   80 (294)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=94.81  E-value=0.023  Score=51.59  Aligned_cols=39  Identities=18%  Similarity=0.289  Sum_probs=35.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   49 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS   49 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            457899999999998899999999999999999998754

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=94.80  E-value=0.021  Score=52.35  Aligned_cols=53  Identities=13%  Similarity=0.137  Sum_probs=41.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------CHhhhccC-CCEEEEecC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NPEQITSE-ADIVIAAAG  284 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------~L~~~~~~-ADIVIsAvG  284 (368)
                      ++++|+|.|+ |.+|+.++..|+++|.+|+++.|...                 .+.+.++. +|+||..+|
T Consensus         2 ~~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            2 SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence            4689999996 56799999999999999999987632                 23344554 899997776

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=94.78  E-value=0.023  Score=54.48  Aligned_cols=94  Identities=21%  Similarity=0.185  Sum_probs=64.6

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQ  271 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~~  271 (368)
                      +||....++..++..++ -.|.+|+|+|+|. ||..+++++...|+ +|+.+.+..                   .++.+
T Consensus       148 ~~~~~~ta~~al~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~  225 (352)
T 3fpc_A          148 IPDMMTTGFHGAELANI-KLGDTVCVIGIGP-VGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVE  225 (352)
T ss_dssp             TTTHHHHHHHHHHHTTC-CTTCCEEEECCSH-HHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHH
T ss_pred             ccchhHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHH
Confidence            34433344455554443 4699999999865 69999999999999 788876542                   12222


Q ss_pred             ----hcc--CCCEEEEecCCCCcc--cCCCcCCCcEEEEeecCC
Q 017679          272 ----ITS--EADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       272 ----~~~--~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n~  307 (368)
                          .+.  .+|+||.++|.+..+  .-+.+++|-.++.+|...
T Consensus       226 ~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  269 (352)
T 3fpc_A          226 QILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG  269 (352)
T ss_dssp             HHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred             HHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccC
Confidence                222  489999999987654  245788888888998653

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=94.78  E-value=0.037  Score=56.53  Aligned_cols=84  Identities=23%  Similarity=0.384  Sum_probs=62.0

Q ss_pred             HHHHHHhCCCCccceEEEEccC---------ccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEE
Q 017679          220 IELLIRSGVEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIA  281 (368)
Q Consensus       220 ~~lL~~~~i~l~GK~VvVIG~g---------~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIs  281 (368)
                      .+.|...+.+++|++|.|+|-+         +.-...++..|.++|++|.+..-.-         .++.+.++.||+||.
T Consensus       341 ~~~l~~~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~ad~vvi  420 (478)
T 3g79_A          341 VAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVV  420 (478)
T ss_dssp             HHHHHTTTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCBTTBCEESCHHHHHTTCSEEEE
T ss_pred             HHHHhhcccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccccCcceecCHHHHHhcCCEEEE
Confidence            3344445668999999999932         2236789999999999999885322         467788999999999


Q ss_pred             ecCCCCcc--cCCCc----C-CCcEEEEe
Q 017679          282 AAGVANLV--RGSWL----K-PGAVVLDV  303 (368)
Q Consensus       282 AvG~p~~I--~~e~i----k-~gavVIDv  303 (368)
                      +|..+.|-  +.+.+    + ++.+|+|.
T Consensus       421 ~t~~~~f~~~d~~~~~~~~~~~~~~i~D~  449 (478)
T 3g79_A          421 LAGHSAYSSLKADWAKKVSAKANPVIIDG  449 (478)
T ss_dssp             CSCCHHHHSCCHHHHHHHHCCSSCEEEES
T ss_pred             ecCCHHHHhhhHHHHHHHhccCCCEEEEC
Confidence            99988773  33333    3 37799994

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=94.77  E-value=0.033  Score=50.43  Aligned_cols=36  Identities=31%  Similarity=0.277  Sum_probs=32.2

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +.||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~   37 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAG   37 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            468999999998888999999999999999887654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=94.76  E-value=0.028  Score=51.15  Aligned_cols=34  Identities=26%  Similarity=0.257  Sum_probs=31.3

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   35 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN   35 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            6899999998888999999999999999998765

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=94.75  E-value=0.012  Score=54.18  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   53 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRD   53 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999998888999999999999999999775

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=94.75  E-value=0.017  Score=52.08  Aligned_cols=35  Identities=31%  Similarity=0.292  Sum_probs=31.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      .++||.++|.|+++-+|+.++..|+++|++|.+..
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~   38 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHY   38 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence            36899999999988889999999999999998853

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=94.75  E-value=0.016  Score=53.17  Aligned_cols=38  Identities=13%  Similarity=0.088  Sum_probs=34.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -.++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   44 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAART   44 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            35799999999998888999999999999999999875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=94.74  E-value=0.019  Score=52.49  Aligned_cols=38  Identities=32%  Similarity=0.346  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   41 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNR   41 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            57899999999998899999999999999999987753

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=94.74  E-value=0.016  Score=53.76  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   60 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS   60 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999888999999999999999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=94.73  E-value=0.061  Score=50.21  Aligned_cols=53  Identities=19%  Similarity=0.273  Sum_probs=41.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------HhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~~~~~~ADIVIsAvG~  285 (368)
                      .+|+|.|+++.+|+.++..|+++|++|+++.+....                     +.+.++..|+||.++|.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence            479999999999999999999999999998775321                     33556778999987774

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=94.72  E-value=0.024  Score=54.82  Aligned_cols=95  Identities=16%  Similarity=0.139  Sum_probs=63.2

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPE  270 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~  270 (368)
                      .+||.....+..+.+..---.|++|+|+|+|. ||..+++++...|+ +|+.+.+..                   .++.
T Consensus       170 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~  248 (371)
T 1f8f_A          170 PLGCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPV  248 (371)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEESCSH-HHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHH
T ss_pred             HhcchHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHH
Confidence            45665555555553332224699999999765 69999999888998 687775431                   2232


Q ss_pred             hhcc-----CCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          271 QITS-----EADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ~~~~-----~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      +.++     .+|+||.++|.+..+  --+.++++-.++.+|..
T Consensus       249 ~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~  291 (371)
T 1f8f_A          249 AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAP  291 (371)
T ss_dssp             HHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCC
T ss_pred             HHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCC
Confidence            2222     479999999876543  23577888788888865

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=94.71  E-value=0.027  Score=51.37  Aligned_cols=35  Identities=23%  Similarity=0.213  Sum_probs=31.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +||.++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   35 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLP   35 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECG
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            37899999999889999999999999999998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=94.71  E-value=0.035  Score=50.59  Aligned_cols=38  Identities=24%  Similarity=0.265  Sum_probs=33.5

Q ss_pred             CCCccceEEEEccCcc--chHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNI--VGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~--VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+++|.|+++.  +|+.++..|+++|++|+++.+.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~   42 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG   42 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence            4689999999998755  7999999999999999988665

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=94.70  E-value=0.026  Score=51.23  Aligned_cols=38  Identities=21%  Similarity=0.267  Sum_probs=34.7

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   41 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP   41 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence            47899999999999899999999999999999988765

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=94.70  E-value=0.021  Score=52.01  Aligned_cols=71  Identities=21%  Similarity=0.248  Sum_probs=53.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEE-EEEeCCC------CCHhhhc-cCCCEEEEecCCCC-c-ccCCCcCCCcEEEEe
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATV-SIVHALT------KNPEQIT-SEADIVIAAAGVAN-L-VRGSWLKPGAVVLDV  303 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtV-ti~h~~t------~~L~~~~-~~ADIVIsAvG~p~-~-I~~e~ik~gavVIDv  303 (368)
                      +|.|||.|.+ |++++..|.+.|.+| .++++..      .++++.+ .++|+||.+++... . +-...++.|..||+.
T Consensus         2 ~vgiIG~G~m-G~~~~~~l~~~g~~lv~v~d~~~~~~~~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~~   80 (236)
T 2dc1_A            2 LVGLIGYGAI-GKFLAEWLERNGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAASQQAVKDYAEKILKAGIDLIVL   80 (236)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEEECSSCCCTTEESSHHHHTTSCCSEEEECSCHHHHHHHHHHHHHTTCEEEES
T ss_pred             EEEEECCCHH-HHHHHHHHhcCCCEEEEEEecCcchhhhcCCHHHHhcCCCCEEEECCCHHHHHHHHHHHHHCCCcEEEE
Confidence            6899999875 999999998888886 6777653      3677777 69999999997421 1 223456778888887


Q ss_pred             ec
Q 017679          304 GT  305 (368)
Q Consensus       304 g~  305 (368)
                      ..
T Consensus        81 ~~   82 (236)
T 2dc1_A           81 ST   82 (236)
T ss_dssp             CG
T ss_pred             Cc
Confidence            53

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=94.70  E-value=0.03  Score=50.94  Aligned_cols=37  Identities=11%  Similarity=0.082  Sum_probs=31.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++.+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~   40 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS   40 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence            4578999999998888999999999999999988554

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=94.70  E-value=0.019  Score=52.58  Aligned_cols=37  Identities=19%  Similarity=0.283  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   46 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS   46 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999889999999999999999998765

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=94.66  E-value=0.021  Score=55.03  Aligned_cols=70  Identities=20%  Similarity=0.283  Sum_probs=52.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------CCHhhhccCCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      +|.|||.|.+ |.+++..|++.|.+|++++++.                            .++.+.+.++|+||.++..
T Consensus        17 kI~iIG~G~m-G~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~   95 (366)
T 1evy_A           17 KAVVFGSGAF-GTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT   95 (366)
T ss_dssp             EEEEECCSHH-HHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH
T ss_pred             eEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh
Confidence            7999999875 9999999999999999997642                            1344557789999999974


Q ss_pred             CC---cccC------CCcCC-CcEEEEee
Q 017679          286 AN---LVRG------SWLKP-GAVVLDVG  304 (368)
Q Consensus       286 p~---~I~~------e~ik~-gavVIDvg  304 (368)
                      ..   .+..      ..+++ +.+|||+.
T Consensus        96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~  124 (366)
T 1evy_A           96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCT  124 (366)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHTCCEEECC
T ss_pred             HHHHHHHHHhHHHHHHhcCccCCEEEEEC
Confidence            22   1221      23567 88999985

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=94.66  E-value=0.014  Score=55.95  Aligned_cols=92  Identities=16%  Similarity=0.164  Sum_probs=64.0

Q ss_pred             ccCCHHHHHHHHHHh-----CCCCccceEEEEccCccchHHHHHHHhhC--CCEEEEEeCCCC--------------CHh
Q 017679          212 IPCTPKGCIELLIRS-----GVEIMGKNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTK--------------NPE  270 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~-----~i~l~GK~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t~--------------~L~  270 (368)
                      +||.....+..|+..     ++  .|++|+|+|+| .||..+++++...  |++|+.+.+...              +..
T Consensus       148 l~~~~~ta~~al~~~~~~~~~~--~g~~VlV~GaG-~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~  224 (344)
T 2h6e_A          148 LADAGTTSMGAIRQALPFISKF--AEPVVIVNGIG-GLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMK  224 (344)
T ss_dssp             GGTHHHHHHHHHHHHHHHHTTC--SSCEEEEECCS-HHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHH
T ss_pred             hhhhhHHHHHHHHhhhhcccCC--CCCEEEEECCC-HHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccc
Confidence            466555556666665     55  89999999995 5699999999888  999888865421              111


Q ss_pred             -------hhc--cCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          271 -------QIT--SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 -------~~~--~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                             +..  +.+|+||.++|.+..+  --+.++++-.++.+|..
T Consensus       225 ~~~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~  271 (344)
T 2h6e_A          225 DAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGME  271 (344)
T ss_dssp             HHHHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred             cchHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCC
Confidence                   111  1579999999976433  23567787778888864

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=94.66  E-value=0.049  Score=52.58  Aligned_cols=55  Identities=29%  Similarity=0.411  Sum_probs=44.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC--CC-------------------------CHhhhccCCCEEEEe
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL--TK-------------------------NPEQITSEADIVIAA  282 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~--t~-------------------------~L~~~~~~ADIVIsA  282 (368)
                      +.++|.|||+|. +|.+++..|+..|. +|+++...  ..                         +-.+.+++||+||.+
T Consensus         7 ~~~kv~ViGaG~-vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia   85 (315)
T 3tl2_A            7 KRKKVSVIGAGF-TGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT   85 (315)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence            468999999865 59999999999998 99998765  10                         113668999999999


Q ss_pred             cCCC
Q 017679          283 AGVA  286 (368)
Q Consensus       283 vG~p  286 (368)
                      +|.|
T Consensus        86 ag~p   89 (315)
T 3tl2_A           86 AGIA   89 (315)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9865

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=94.66  E-value=0.04  Score=51.96  Aligned_cols=54  Identities=19%  Similarity=0.157  Sum_probs=43.8

Q ss_pred             cceEEEEccCccchHHHHHHHhhCC-----CEEEEEeCCCC--------------------CHhhhccC---CCEEEEec
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHH-----ATVSIVHALTK--------------------NPEQITSE---ADIVIAAA  283 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~g-----AtVti~h~~t~--------------------~L~~~~~~---ADIVIsAv  283 (368)
                      ||+|+|.|+++.+|+.++..|+++|     ++|+++.+...                    .+.+.++.   .|+||.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a   80 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT   80 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence            5899999999999999999999999     89999876521                    13355666   89999887


Q ss_pred             CC
Q 017679          284 GV  285 (368)
Q Consensus       284 G~  285 (368)
                      |.
T Consensus        81 ~~   82 (364)
T 2v6g_A           81 WA   82 (364)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=94.65  E-value=0.045  Score=52.46  Aligned_cols=94  Identities=20%  Similarity=0.091  Sum_probs=56.8

Q ss_pred             cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCC----------------CCCHhhhc--
Q 017679          213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHAL----------------TKNPEQIT--  273 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~----------------t~~L~~~~--  273 (368)
                      ||....+...|.+..---.|++|+|.|+++.||..+++++...| ++|+...+.                ..++.+.+  
T Consensus       124 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~  203 (349)
T 4a27_A          124 PMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKR  203 (349)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHGGGSSEEEETTSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHcCCcEEEcCCccHHHHHHH
Confidence            44444455555444333479999999997778999988887775 677765432                12222222  


Q ss_pred             ---cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          274 ---SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       274 ---~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                         ..+|+||.++|.+.+ -.-+.++++-.++-+|..
T Consensus       204 ~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~~  240 (349)
T 4a27_A          204 ISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSS  240 (349)
T ss_dssp             HCTTCEEEEEEECC-------CTTEEEEEEEEEEC--
T ss_pred             hcCCCceEEEECCCchhHHHHHHHhhcCCEEEEECCC
Confidence               247888888887655 233567888788888864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=94.65  E-value=0.035  Score=52.07  Aligned_cols=33  Identities=18%  Similarity=0.238  Sum_probs=30.2

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +|+|+|.|+++-+|+.++..|+++|++|+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r   34 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence            589999999888999999999999999998865

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=94.65  E-value=0.028  Score=51.56  Aligned_cols=39  Identities=26%  Similarity=0.226  Sum_probs=35.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.+...
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~   69 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHP   69 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            578999999999988999999999999999999887643

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=94.64  E-value=0.059  Score=50.38  Aligned_cols=34  Identities=24%  Similarity=0.180  Sum_probs=30.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .+|+|+|.|+++-+|+.++..|+++|++|+++.+
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r   41 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR   41 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc
Confidence            3799999999898999999999999999987654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=94.64  E-value=0.027  Score=52.73  Aligned_cols=39  Identities=21%  Similarity=0.239  Sum_probs=35.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+||.++|-|++.-+|+.+|..|+++||+|.++.++.
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~   43 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA   43 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc
Confidence            579999999999988889999999999999999998764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=94.63  E-value=0.014  Score=53.42  Aligned_cols=38  Identities=26%  Similarity=0.226  Sum_probs=34.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -+++||+|+|.|+++-+|+.++..|+++|++|.++.++
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~   62 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD   62 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            45889999999998888999999999999999999775

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.63  E-value=0.042  Score=51.26  Aligned_cols=38  Identities=24%  Similarity=0.130  Sum_probs=31.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .-.+++|+|.|+++-+|+.++..|+++|++|+++.+..
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~   48 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR   48 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCC
Confidence            34689999999999999999999999999999987753

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=94.62  E-value=0.051  Score=51.84  Aligned_cols=51  Identities=29%  Similarity=0.486  Sum_probs=40.0

Q ss_pred             eEEEEccCccchHHHHHHHhhC--CCEEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT--------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      +|+|||+|. +|.+++..|+..  |.+|+++.+..                          .++++ +++||+||.++|.
T Consensus         2 kI~VIGaG~-vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~   79 (310)
T 1guz_A            2 KITVIGAGN-VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL   79 (310)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred             EEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence            799999965 599999999885  67899986542                          23333 7889999999986


Q ss_pred             C
Q 017679          286 A  286 (368)
Q Consensus       286 p  286 (368)
                      |
T Consensus        80 p   80 (310)
T 1guz_A           80 P   80 (310)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=94.62  E-value=0.035  Score=50.03  Aligned_cols=37  Identities=24%  Similarity=0.264  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~   46 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD   46 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999998775

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=94.61  E-value=0.012  Score=54.92  Aligned_cols=39  Identities=23%  Similarity=0.122  Sum_probs=31.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~   67 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRP   67 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            468999999999988889999999999999999998753

>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A

Probab=94.61  E-value=0.051  Score=55.06  Aligned_cols=52  Identities=21%  Similarity=0.304  Sum_probs=43.8

Q ss_pred             ccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeC
Q 017679          212 IPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA  264 (368)
Q Consensus       212 ~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~  264 (368)
                      .+.|.+|++..    +++.+.+++||+|+|.|.|+ ||..++.+|.+.|++|+ ++.+
T Consensus       211 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGn-VG~~~a~~L~e~GakvVavsD~  267 (440)
T 3aog_A          211 RDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGN-VGNAAARAFHDHGARVVAVQDH  267 (440)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEECS
T ss_pred             CcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCH-HHHHHHHHHHHCCCEEEEEEcC
Confidence            36788887655    56789999999999999887 59999999999999876 6665

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=94.61  E-value=0.031  Score=54.65  Aligned_cols=39  Identities=13%  Similarity=0.025  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      ...+|+|+|.|+++.+|+.++..|++.|++|+++.|...
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~  104 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN  104 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence            356889999999999999999999999999999877654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=94.57  E-value=0.014  Score=57.90  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=55.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH-------------------------------------h--
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP-------------------------------------E--  270 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L-------------------------------------~--  270 (368)
                      -.|++|+|+|+++.||..+++++...|++|+++.+....+                                     .  
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence            4699999999966679999999999999988776532110                                     0  


Q ss_pred             --hhc-cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          271 --QIT-SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 --~~~-~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                        +.+ ..+|+||.++|.+.+ -.-+.+++|-.++.+|..
T Consensus       299 v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~  338 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSS  338 (447)
T ss_dssp             HHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCT
T ss_pred             HHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecC
Confidence              111 358999999997533 123467888888888854

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=94.57  E-value=0.041  Score=52.21  Aligned_cols=53  Identities=23%  Similarity=0.276  Sum_probs=41.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC--CEEEEEeCCC-------------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT-------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ++|+|||+|. +|.+++..|++.|  .+|+++.++.                         .++ +.+++||+||.+++.
T Consensus         2 ~kI~VIGaG~-~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~   79 (309)
T 1hyh_A            2 RKIGIIGLGN-VGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGN   79 (309)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred             CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCC
Confidence            4799999776 4999999999888  6899987642                         123 456789999999987


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        80 ~~   81 (309)
T 1hyh_A           80 IK   81 (309)
T ss_dssp             GG
T ss_pred             cc
Confidence            54

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=94.56  E-value=0.038  Score=50.60  Aligned_cols=36  Identities=17%  Similarity=0.225  Sum_probs=30.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ++.||+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~   58 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYH   58 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            478999999999988999999999999999977543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=94.55  E-value=0.019  Score=54.99  Aligned_cols=84  Identities=14%  Similarity=0.241  Sum_probs=59.6

Q ss_pred             HHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHhhhc------
Q 017679          220 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQIT------  273 (368)
Q Consensus       220 ~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~~~~------  273 (368)
                      +..|+..++  .|++|+|+|+| .+|..+++++...|+ +|+.+.+..                   .++.+.+      
T Consensus       158 ~~~l~~~~~--~g~~VlV~GaG-~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g  234 (348)
T 2d8a_A          158 VDTVLAGPI--SGKSVLITGAG-PLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDG  234 (348)
T ss_dssp             HHHHTTSCC--TTCCEEEECCS-HHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTT
T ss_pred             HHHHHhcCC--CCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCC
Confidence            334444444  89999999995 569999999999999 888876531                   2222222      


Q ss_pred             cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679          274 SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       274 ~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      +.+|+||.++|.+..+.  -+.++++..++.+|..
T Consensus       235 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~  269 (348)
T 2d8a_A          235 NGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLY  269 (348)
T ss_dssp             SCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccC
Confidence            25899999999755432  3567788888899864

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=94.53  E-value=0.019  Score=51.81  Aligned_cols=37  Identities=27%  Similarity=0.223  Sum_probs=33.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~   38 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATS   38 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999998889999999999999999998775

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=94.50  E-value=0.037  Score=51.95  Aligned_cols=54  Identities=20%  Similarity=0.338  Sum_probs=43.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhC--CCEEEEEeCCCC--------------------------CHhhhccCCCEEEEecC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTK--------------------------NPEQITSEADIVIAAAG  284 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t~--------------------------~L~~~~~~ADIVIsAvG  284 (368)
                      |+|+|.|+++-+|+.++..|+++  |++|+++.+...                          .+.+.++.+|+||..+|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   84 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   84 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence            68999999999999999999998  889999876420                          13356678899998887


Q ss_pred             CC
Q 017679          285 VA  286 (368)
Q Consensus       285 ~p  286 (368)
                      ..
T Consensus        85 ~~   86 (348)
T 1oc2_A           85 ES   86 (348)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}

Probab=94.49  E-value=0.047  Score=55.95  Aligned_cols=128  Identities=17%  Similarity=0.162  Sum_probs=71.5

Q ss_pred             CCCccceEEEEccCccchHH-HHHHHhhCCCEEEEEeCCC-CCHhhhccCCCEEEEecC-CCCcccCCCcCCCcEEEEee
Q 017679          228 VEIMGKNAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAG-VANLVRGSWLKPGAVVLDVG  304 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrp-la~lL~~~gAtVti~h~~t-~~L~~~~~~ADIVIsAvG-~p~~I~~e~ik~gavVIDvg  304 (368)
                      .-+++|++.+||-|++ |.. +|.+|.++|++|+++..+. +...+.+++..|-|. .| .+.-+..   ....+|+--|
T Consensus        15 ~~~~~~~i~~iGiGg~-Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~-~G~~~~~~~~---~~d~vV~Spg   89 (524)
T 3hn7_A           15 LYFQGMHIHILGICGT-FMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIE-EGYLIAHLQP---APDLVVVGNA   89 (524)
T ss_dssp             ----CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEE-ESCCGGGGCS---CCSEEEECTT
T ss_pred             eeecCCEEEEEEecHh-hHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEE-CCCCHHHcCC---CCCEEEECCC
Confidence            4468999999999998 986 7999999999999999864 223334444343332 12 1111100   1234555555


Q ss_pred             cCCCCCCCCCCCCCCcEEEcccchhh--hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679          305 TCPVDVSVDPSCEYGYRLMGDVCYEE--AMRLASVITPVPGGVGPMTVAMLLSNTLDSA  361 (368)
Q Consensus       305 ~n~~~~~~d~t~~~~~kl~GDVd~~~--~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~  361 (368)
                      +++..+....-.+.+-+++++.++-.  ..+..- +--|-|=-|.-|+..|+.++++.+
T Consensus        90 i~~~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~-vIaVTGTnGKTTTt~li~~iL~~~  147 (524)
T 3hn7_A           90 MKRGMDVIEYMLDTGLRYTSGPQFLSEQVLQSRH-VIAVAGTHGKTTTTTMLAWILHYA  147 (524)
T ss_dssp             CCTTSHHHHHHHHHTCCEEEHHHHHHHHTGGGSE-EEEEECSSCHHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHHHHHHCCCcEEEHHHHHHHHHhccCc-EEEEECCCCHHHHHHHHHHHHHHc
Confidence            54421000000001335888887522  211111 113457788999999999998765

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=94.49  E-value=0.023  Score=52.70  Aligned_cols=37  Identities=24%  Similarity=0.240  Sum_probs=34.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~   59 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK   59 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999998775

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=94.49  E-value=0.05  Score=50.65  Aligned_cols=54  Identities=15%  Similarity=0.198  Sum_probs=42.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhcc--CCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITS--EADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~--~ADIVIsAvG~p  286 (368)
                      |+|+|.|+++-+|+.++..|+++|++|+++.+...                     .+.+.++  ..|+||..+|..
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~   78 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS   78 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence            68999999999999999999999999999876421                     1234455  789999887743

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=94.49  E-value=0.019  Score=52.31  Aligned_cols=37  Identities=32%  Similarity=0.346  Sum_probs=33.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   39 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN   39 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999999889999999999999999998775

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=94.46  E-value=0.029  Score=49.46  Aligned_cols=70  Identities=16%  Similarity=0.191  Sum_probs=50.8

Q ss_pred             eEEEEc-cCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecCCCC---c
Q 017679          234 NAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN---L  288 (368)
Q Consensus       234 ~VvVIG-~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~p~---~  288 (368)
                      ++.||| .|. +|+.++..|.+.|.+|+++.++..                     ++.+.++++|+||.+++...   .
T Consensus         2 ~i~iiGa~G~-~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~~~~~   80 (212)
T 1jay_A            2 RVALLGGTGN-LGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDT   80 (212)
T ss_dssp             EEEEETTTSH-HHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHH
T ss_pred             eEEEEcCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhhHHHH
Confidence            689999 655 599999999999999999987531                     22345678999999997432   1


Q ss_pred             cc--CCCcCCCcEEEEeec
Q 017679          289 VR--GSWLKPGAVVLDVGT  305 (368)
Q Consensus       289 I~--~e~ik~gavVIDvg~  305 (368)
                      +.  .+.+ ++.+++|+..
T Consensus        81 ~~~l~~~~-~~~~vi~~~~   98 (212)
T 1jay_A           81 ARDLKNIL-REKIVVSPLV   98 (212)
T ss_dssp             HHHTHHHH-TTSEEEECCC
T ss_pred             HHHHHHHc-CCCEEEEcCC
Confidence            11  1123 4889999984

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=94.46  E-value=0.022  Score=51.98  Aligned_cols=37  Identities=27%  Similarity=0.290  Sum_probs=33.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   38 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD   38 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc
Confidence            6799999999998889999999999999999987654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=94.45  E-value=0.024  Score=53.90  Aligned_cols=38  Identities=26%  Similarity=0.337  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+|+|.|+++-+|+.++..|+++|++|.++.++.
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~   42 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ   42 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCH
Confidence            57899999999988889999999999999999998763

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=94.45  E-value=0.039  Score=50.93  Aligned_cols=37  Identities=22%  Similarity=0.361  Sum_probs=34.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   43 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRC   43 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            5899999999998888999999999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	368
d1a4ia1	170	c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehy	4e-50
d1b0aa1	166	c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehy	5e-47
d1edza2	146	c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/	2e-45
d1edza1	171	c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehy	3e-35
d1b0aa2	121	c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/	5e-34
d1a4ia2	125	c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/	1e-33

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 4e-50
 Identities = 82/170 (48%), Positives = 113/170 (66%), Gaps = 3/170 (1%)

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
              +N G LA       FIPCTPKGC+EL+  +GV I G++AVV+GRS IVG P   LL 
Sbjct: 1   LTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLL 60

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
            ++ATV+  H+ T + ++  ++ DI++ A G   +V+G W+KPGA+V+D G   V    D
Sbjct: 61  WNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVP---D 117

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 363
                G +++GDV Y+EA   AS ITPVPGGVGPMTVAML+ +T++SAKR
Sbjct: 118 DKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKR 167

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

 Score =  155 bits (393), Expect = 5e-47
 Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 11/172 (6%)

Query: 194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253
           FHP N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L 
Sbjct: 1   FHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL 58

Query: 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313
               T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++    
Sbjct: 59  LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---- 114

Query: 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365
                  +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +    +
Sbjct: 115 -----NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYH 161

>d1edza2 c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  150 bits (380), Expect = 2e-45
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 6/150 (4%)

Query: 72  QTATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACE 130
           +    I    +AE   + I   V   KK+  G+ P L   L      ++ Y     K  E
Sbjct: 1   KPGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSE 60

Query: 131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKD 190
            +G +  +        +D +  A+   N D S+NGI+V  P+  +  +  +   V  EKD
Sbjct: 61  SMGFRYDLRVI---EDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKD 117

Query: 191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCI 220
           V+G + +   NL                 I
Sbjct: 118 VEGLNHVYYQNLYH--NVRYLDKENRLKSI 145

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  124 bits (313), Expect = 3e-35
 Identities = 42/186 (22%), Positives = 65/186 (34%), Gaps = 56/186 (30%)

Query: 213 PCTPKGCIELL---------IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH 263
           PCTP   +++L         +  G  + GK  +VI RS IVG P + LL    ATV  V 
Sbjct: 1   PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVD 60

Query: 264 ALTKN-------------------------PEQITSEADIVIAAAGVAN-LVRGSWLKPG 297
                                          ++ + ++D+VI      N      ++K G
Sbjct: 61  VNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEG 120

Query: 298 AVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNT 357
           AV ++                          ++    AS+  P+ G V   T+AMLL N 
Sbjct: 121 AVCINFACT------------------KNFSDDVKEKASLYVPMTGKV---TIAMLLRNM 159

Query: 358 LDSAKR 363
           L   + 
Sbjct: 160 LRLVRN 165

>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Length = 121

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

 Score =  120 bits (301), Expect = 5e-34
 Identities = 54/120 (45%), Positives = 80/120 (66%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVG 133
           A +IDGK+IA+++RS + ++V+    +  + PGLAV+LVG    SQ YV +K KACEEVG
Sbjct: 2   AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVG 61

Query: 134 IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 193
             S   +  +  +E E+L  +   N D++I+GILVQLPLP  +D  K+L+ +  +KDVDG
Sbjct: 62  FVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG 121

>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 1e-33
 Identities = 47/123 (38%), Positives = 81/123 (65%), Gaps = 3/123 (2%)

Query: 74  ATVIDGKSIAEEIRSGIDKEVRRMK-KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEV 132
           A +++GK I+ +IR+ +  +V ++K +  G  P LA++ VG R DS  Y+  K+KA EE+
Sbjct: 3   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 62

Query: 133 GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQH--LDEGKILDAVSLEKD 190
           GIK+   +     TE EV+  +++ N+DS+++G LVQLPL     ++  ++++A++ EKD
Sbjct: 63  GIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKD 122

Query: 191 VDG 193
           VDG
Sbjct: 123 VDG 125

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	368
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	100.0
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	100.0
d1edza2	146	Tetrahydrofolate dehydrogenase/cyclohydrolase {Bak	100.0
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	100.0
d1b0aa2	121	Tetrahydrofolate dehydrogenase/cyclohydrolase {Esc	100.0
d1a4ia2	125	Tetrahydrofolate dehydrogenase/cyclohydrolase {Hum	100.0
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	99.59
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	99.56
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	99.52
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	99.51
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	99.42
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	99.24
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	99.02
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	99.02
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.67
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.59
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.45
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	98.27
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	98.16
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	98.1
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	98.0
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	97.99
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	97.96
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	97.94
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.84
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	97.83
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.79
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.75
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.73
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.71
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.61
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.45
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.41
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	97.32
d1vi2a2	102	Putative shikimate dehydrogenase YdiB {Escherichia	97.27
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.26
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.21
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.17
d1npya2	102	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.16
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.08
d1p77a2	101	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.04
d1nyta2	101	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.03
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.01
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.97
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.96
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.92
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	96.9
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.88
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.88
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.86
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.86
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.81
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.8
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.79
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.76
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.76
d1nvta2	110	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.75
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.75
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.69
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.68
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.66
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.66
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.65
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.6
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.55
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.55
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.54
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.53
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.53
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.52
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.52
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.5
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.49
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.49
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.47
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	96.46
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.42
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.42
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.42
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	96.41
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	96.4
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.38
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.38
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.35
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.33
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.33
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.3
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	96.3
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.28
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.28
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.28
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.27
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.27
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.27
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.26
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.24
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.23
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.23
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.2
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.19
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.19
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.18
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.18
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.17
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.17
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	96.16
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.15
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.12
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	96.09
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.07
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	96.05
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.04
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.03
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.03
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.02
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.02
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.01
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.01
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.98
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.97
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.96
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	95.94
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	95.93
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.9
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	95.87
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	95.85
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	95.85
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	95.84
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	95.83
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.77
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.76
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.73
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.72
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	95.68
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.67
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.66
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.65
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	95.65
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.63
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.62
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.6
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.59
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	95.58
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.56
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	95.51
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	95.49
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.45
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.43
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.41
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.39
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	95.37
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	95.37
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	95.31
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	95.3
d1mv8a3	136	GDP-mannose 6-dehydrogenase, GDP-binding domain {P	95.29
d1tuga1	310	Aspartate carbamoyltransferase catalytic subunit {	95.29
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.27
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.26
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	95.25
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.22
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	95.21
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.19
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.07
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.02
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	95.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.99
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.99
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	94.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	94.96
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.91
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	94.89
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	94.85
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.7
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.7
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.69
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.56
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	94.48
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	94.44
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	94.39
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.36
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	94.33
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	94.31
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	94.31
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.27
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.25
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.19
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.11
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	94.11
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.1
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	94.09
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.08
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	93.98
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	93.98
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.98
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	93.96
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.96
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	93.93
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.91
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.9
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.83
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	93.82
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.76
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.69
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.64
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.6
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	93.55
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	93.55
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	93.48
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.47
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	93.45
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.43
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.4
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.36
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	93.35
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	93.3
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	93.2
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.2
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	93.12
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.11
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.1
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	93.05
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	92.94
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.87
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.76
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.74
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.71
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	92.68
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.64
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.61
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	92.58
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.54
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.48
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.38
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	92.28
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	92.24
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.24
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.19
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	92.12
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.03
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	91.98
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	91.83
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.61
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	91.59
d1otha2	170	Ornithine transcarbamoylase {Human (Homo sapiens)	91.53
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.53
d1ml4a2	157	Aspartate carbamoyltransferase catalytic subunit {	91.51
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	91.47
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	91.47
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	91.31
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	91.21
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.19
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	91.17
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	90.95
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	90.92
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	90.87
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	90.76
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	90.61
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.55
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.5
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.25
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	90.25
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.21
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	90.0
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	89.97
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.94
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	89.92
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.73
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	89.52
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	89.45
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	89.26
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	89.26
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	88.94
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	88.88
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	88.36
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	88.24
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	88.09
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	87.96
d1duvg2	183	Ornithine transcarbamoylase {Escherichia coli [Tax	87.92
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	87.67
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	87.61
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	87.34
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	87.3
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	87.29
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	87.02
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.83
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	86.46
d7reqa2	168	Methylmalonyl-CoA mutase alpha subunit, C-terminal	86.2
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	86.15
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	86.06
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	85.98
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	85.75
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.69
d1ekxa2	160	Aspartate carbamoyltransferase catalytic subunit {	85.54
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	85.49
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.4
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	85.38
d1dlja3	108	UDP-glucose dehydrogenase (UDPGDH), C-terminal (UD	85.24
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	85.2
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	85.2
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	84.81
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	84.33
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.81
d1j4aa2	134	D-lactate dehydrogenase {Lactobacillus helveticus	83.56
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.41
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.51
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	82.49
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	82.34
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.34
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.32
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.89
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	81.74
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.43
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	81.32
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	81.03
d2naca2	186	Formate dehydrogenase {Pseudomonas sp., strain 101	80.99
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.84
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	80.42
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	80.28
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	80.17

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-55  Score=391.27  Aligned_cols=162  Identities=46%  Similarity=0.790  Sum_probs=157.3

Q ss_pred             cCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhc
Q 017679          194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQIT  273 (368)
Q Consensus       194 l~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~  273 (368)
                      |||.|+|+|+.|  .+.|+||||+||+++|++|+++++||+|+|||||++||+|++++|+++||+||+||++|+++++++
T Consensus         1 fhp~N~G~l~~~--~~~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~   78 (166)
T d1b0aa1           1 FHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV   78 (166)
T ss_dssp             CSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             CCchhHHHHhCC--CCCCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHH
Confidence            799999999977  689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHH
Q 017679          274 SEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       274 ~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amL  353 (368)
                      ++|||||+|+|+|++|+++|+|+|++|||+|+++.+         +++++||+||+++.++|+++|||||||||||++||
T Consensus        79 ~~ADivI~a~G~p~~i~~~~vk~g~vvIDvGi~~~~---------~~~~~Gdvd~~~v~~~a~~~TPvPGGVGP~Tva~L  149 (166)
T d1b0aa1          79 ENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATL  149 (166)
T ss_dssp             HHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEECT---------TSCEECSBCHHHHHHHCSEECCSSSSSHHHHHHHH
T ss_pred             hhhhHhhhhccCcccccccccCCCcEEEecCceecC---------CCCEEeccccHhHHhheeEeCCCCCcccHHHHHHH
Confidence            999999999999999999999999999999999876         46899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC
Q 017679          354 LSNTLDSAKRAYG  366 (368)
Q Consensus       354 l~N~v~a~~~~~~  366 (368)
                      |+|+++++++|++
T Consensus       150 ~~N~v~a~~~~~~  162 (166)
T d1b0aa1         150 IENTLQACVEYHD  162 (166)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999975

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-55  Score=389.79  Aligned_cols=170  Identities=48%  Similarity=0.815  Sum_probs=156.0

Q ss_pred             cCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhc
Q 017679          194 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQIT  273 (368)
Q Consensus       194 l~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~  273 (368)
                      +|++|+|+|+.|+.+++|+||||.||+++|++|+++++||+|+|||||++||+|++++|+++||||++||++|+++.+++
T Consensus         1 l~~~N~G~l~~g~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~   80 (170)
T d1a4ia1           1 LTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV   80 (170)
T ss_dssp             CSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             CCccchhhHhcCCCCCCCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHH
Confidence            68999999999866789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHH
Q 017679          274 SEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAML  353 (368)
Q Consensus       274 ~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amL  353 (368)
                      ++|||||+|+|+|++++++|+|+|++|||+|+++.+   |+..+.+++++||+||+++.++|+++|||||||||||++||
T Consensus        81 ~~aDivi~a~G~~~~i~~~~vk~g~iviDvgi~~~~---~~~~~~~~~~~gdvd~~~v~~~a~~~TPvPGGVGp~Tva~L  157 (170)
T d1a4ia1          81 NKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVP---DDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAML  157 (170)
T ss_dssp             TTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC-------------CCBCSBCHHHHTTTCSEECCSSSSHHHHHHHHH
T ss_pred             hhccchhhccccccccccccccCCCeEeccCccccc---ccccCCCCEEecccchHhhhhhceEeCCCCCchhHHHHHHH
Confidence            999999999999999999999999999999999986   43333467899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC
Q 017679          354 LSNTLDSAKRAYG  366 (368)
Q Consensus       354 l~N~v~a~~~~~~  366 (368)
                      |+|++++++||+.
T Consensus       158 ~~N~v~a~~r~l~  170 (170)
T d1a4ia1         158 MQSTVESAKRFLE  170 (170)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhhC
Confidence            9999999999974

>d1edza2 c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-42  Score=303.64  Aligned_cols=142  Identities=24%  Similarity=0.272  Sum_probs=133.2

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN  152 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~  152 (368)
                      +++|||++||++|++++++++++|+++. |++|+|++|+||+||+|.+|+++|.|+|+++||+++..   +..+++|+++
T Consensus         3 gkiidG~~iA~~i~~~l~~~v~~l~~~~~g~~P~Lavilvg~d~aS~~Yv~~k~k~a~~~Gi~~~l~---~~~~~~~l~~   79 (146)
T d1edza2           3 GRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLR---VIEDKDFLEE   79 (146)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEEE---ECSSGGGHHH
T ss_pred             CeeccHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCccccC---ccchHHHHHH
Confidence            5799999999999999999999998764 79999999999999999999999999999999998654   4557899999


Q ss_pred             HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHH
Q 017679          153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCI  220 (368)
Q Consensus       153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~  220 (368)
                      .|++||+|++|||||||+|||+|+|+.+++++|+|+|||||||+.|+|+|+.|  ..++.||||+||+
T Consensus        80 ~I~~LN~D~~V~GIlvQlPLP~~i~~~~i~~~I~p~KDVDGl~p~N~G~L~~~--~~~l~P~t~~~~i  145 (146)
T d1edza2          80 AIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHN--VRYLDKENRLKSI  145 (146)
T ss_dssp             HHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTT--CCBSSSSSCSBCC
T ss_pred             HHHHHhcchhhhhhhhcCCCCcccCHHHHHHhcCCCCCcCCCChHhHHHHHcC--CCCCCCCCccCcc
Confidence            99999999999999999999999999999999999999999999999999987  7888999998864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-40  Score=296.05  Aligned_cols=132  Identities=31%  Similarity=0.460  Sum_probs=121.7

Q ss_pred             cCCHHHHHHHHHHhCC---------CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------
Q 017679          213 PCTPKGCIELLIRSGV---------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------  268 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i---------~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------  268 (368)
                      ||||.||++||++|++         +++||+|+|||||++||+|+|.||+++|||||+||+++.+               
T Consensus         1 PcTp~gv~~LL~~y~I~~~~~~~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~   80 (171)
T d1edza1           1 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHV   80 (171)
T ss_dssp             CHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEE
T ss_pred             CCcHHHHHHHHHHcCcccccccccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeecc
Confidence            9999999999999998         9999999999999999999999999999999999987522               


Q ss_pred             ----------HhhhccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceE
Q 017679          269 ----------PEQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASV  337 (368)
Q Consensus       269 ----------L~~~~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~  337 (368)
                                +++++++|||||+|+|.|++ ++.||+|+|++|||+|++++.                  ++++.++|++
T Consensus        81 ~~~~~~~~~~lk~~~~~aDIvIsavG~p~~~i~~d~ik~GavvIDvGi~~~~------------------~~~v~~~a~~  142 (171)
T d1edza1          81 EDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTKNF------------------SDDVKEKASL  142 (171)
T ss_dssp             EEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCTTEEEEECSSSCCB------------------CGGGGTTEEE
T ss_pred             ccccccchhHHhhccccCCEEEEccCCCccccChhhcccCceEeeccccccc------------------ccchhheeeE
Confidence                      67788899999999999998 999999999999999998543                  2677789999


Q ss_pred             eccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679          338 ITPVPGGVGPMTVAMLLSNTLDSAKRAY  365 (368)
Q Consensus       338 iTPVPGGVGp~T~amLl~N~v~a~~~~~  365 (368)
                      ||||||||   |++|||+|+++++|++.
T Consensus       143 iTPVPGGV---TvamLl~N~v~a~~~~~  167 (171)
T d1edza1         143 YVPMTGKV---TIAMLLRNMLRLVRNVE  167 (171)
T ss_dssp             EESCCHHH---HHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCHH---HHHHHHHHHHHHHHHHH
Confidence            99999997   99999999999999764

>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.6e-37  Score=260.02  Aligned_cols=120  Identities=45%  Similarity=0.720  Sum_probs=118.1

Q ss_pred             eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679           74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA  153 (368)
Q Consensus        74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~  153 (368)
                      |+|||||++|++|+++++++++.++++.+++|+|++|+||+||+|.+|+++|.|+|+++||+++.+.||++++|+||++.
T Consensus         2 A~iLdGk~vA~~i~~~l~~~i~~~~~~~~~~P~LavI~vg~d~aS~~Yv~~k~k~a~~lGi~~~~~~l~~~~t~~~l~~~   81 (121)
T d1b0aa2           2 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLEL   81 (121)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHHHH
T ss_pred             CEeccHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCChhHHHHHHHHHHHHHhhccceeeeeccccccHHHHHHH
Confidence            78999999999999999999999998878899999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCc
Q 017679          154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG  193 (368)
Q Consensus       154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDg  193 (368)
                      |++||+|++|||||||+|||+|+++.+++++|+|+|||||
T Consensus        82 I~~lN~d~~v~GIlvqlPLP~~i~~~~i~~~I~p~KDVDG  121 (121)
T d1b0aa2          82 IDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG  121 (121)
T ss_dssp             HHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTC
T ss_pred             HHHHhCCCchhhhhhcCCCCCCcCHHHHHhccCcCcCCCC
Confidence            9999999999999999999999999999999999999998

>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Tetrahydrofolate dehydrogenase/cyclohydrolase
domain: Tetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-36  Score=256.11  Aligned_cols=121  Identities=39%  Similarity=0.715  Sum_probs=117.3

Q ss_pred             ceeeeecHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679           73 TATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL  151 (368)
Q Consensus        73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~  151 (368)
                      .|.|||||++|++|++++++++++|+++. |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus         2 ~a~iLdGk~vA~~i~~~lk~~v~~l~~~~~g~~P~LavIlvg~d~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~el~   81 (125)
T d1a4ia2           2 PAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVM   81 (125)
T ss_dssp             CCEECCHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHH
T ss_pred             CCEEeehHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCChhHHHHHHHHHHHHHhccceEEEEecCcchhHHHHH
Confidence            37899999999999999999999998774 78999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCccEEEEeCCCCCC--CCHHHHHhcCCcccccCc
Q 017679          152 NALSNYNQDSSINGILVQLPLPQH--LDEGKILDAVSLEKDVDG  193 (368)
Q Consensus       152 ~~I~~LN~D~~V~GIlVqlPLp~~--id~~~il~~I~p~KDVDg  193 (368)
                      +.|++||+|++|||||||+|||+|  +++.+++++|+|.|||||
T Consensus        82 ~~I~~lN~d~~V~GIlvqlPLP~~~~~~~~~i~~~I~p~KDVDG  125 (125)
T d1a4ia2          82 KYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDG  125 (125)
T ss_dssp             HHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTC
T ss_pred             HHHHHHhccCCcceEEEecCCCCCCCcCHHHHHhcCCCCcCCCC
Confidence            999999999999999999999987  999999999999999998

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=2.7e-15  Score=130.87  Aligned_cols=128  Identities=18%  Similarity=0.170  Sum_probs=101.4

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC------------------Hh-hhccCCC
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------------------PE-QITSEAD  277 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~------------------L~-~~~~~AD  277 (368)
                      .|+++.|++.+++++||+|+|+|+|++ +|+++..|.+.|++|+|++|+...                  +. ....++|
T Consensus         3 ~Gf~~~l~~~~~~~~~k~vlIlGaGGa-arai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~d   81 (170)
T d1nyta1           3 VGLLSDLERLSFIRPGLRILLIGAGGA-SRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFD   81 (170)
T ss_dssp             HHHHHHHHHHTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCS
T ss_pred             hHHHHHHHHcCCCCCCCEEEEECCcHH-HHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccccccccc
Confidence            789999999999999999999999998 999999999999999999987411                  11 1246789


Q ss_pred             EEEEecCC---CC--cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHH
Q 017679          278 IVIAAAGV---AN--LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAM  352 (368)
Q Consensus       278 IVIsAvG~---p~--~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~am  352 (368)
                      +||++|+.   ++  .++.+.++++.+|+|+.|+|.+          +++.     ..+ +..|+-+ +-+|.+     |
T Consensus        82 liIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~----------T~ll-----~~A-~~~G~~~-~i~Gl~-----M  139 (170)
T d1nyta1          82 LIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGK----------TPFL-----AWC-EQRGSKR-NADGLG-----M  139 (170)
T ss_dssp             EEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSC----------CHHH-----HHH-HHTTCCE-EECTHH-----H
T ss_pred             eeecccccCcccCCCCCcHHHhccCcEEEEeecCCCC----------CHHH-----HHH-HHcCCCc-ccCCHH-----H
Confidence            99998852   22  3566789999999999999975          3555     445 3445422 334555     9


Q ss_pred             HHHHHHHHHHHHhCC
Q 017679          353 LLSNTLDSAKRAYGF  367 (368)
Q Consensus       353 Ll~N~v~a~~~~~~~  367 (368)
                      |++|.+.+++.|+|.
T Consensus       140 Li~Qa~~~f~lwtG~  154 (170)
T d1nyta1         140 LVAQAAHAFLLWHGV  154 (170)
T ss_dssp             HHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHhCC
Confidence            999999999999986

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=5.9e-15  Score=130.02  Aligned_cols=127  Identities=24%  Similarity=0.266  Sum_probs=102.0

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCCCH--------------------------
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTKNP--------------------------  269 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~~L--------------------------  269 (368)
                      .|+++.|++.+++++||+|+|+|+|++ |++++..|.+.|+ ++++++|+..++                          
T Consensus         3 ~Gf~~~l~~~~~~l~~k~vlIlGaGGa-arai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   81 (182)
T d1vi2a1           3 TGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ   81 (182)
T ss_dssp             HHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH
T ss_pred             HHHHHHHHHcCCCcCCCEEEEECCcHH-HHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc
Confidence            789999999999999999999999998 9999999999997 899999875322                          


Q ss_pred             ---hhhccCCCEEEEecCC---C--C--c-ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEe
Q 017679          270 ---EQITSEADIVIAAAGV---A--N--L-VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI  338 (368)
Q Consensus       270 ---~~~~~~ADIVIsAvG~---p--~--~-I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~i  338 (368)
                         .+.+.++|+||++|+.   +  .  + .+.+.++++.+|+|+.|+|.+          ++|.     ..+ +..|+ 
T Consensus        82 ~~~~~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~----------T~ll-----~~a-~~~g~-  144 (182)
T d1vi2a1          82 QAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM----------TKLL-----QQA-QQAGC-  144 (182)
T ss_dssp             HHHHHHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSS----------CHHH-----HHH-HTTTC-
T ss_pred             cchhhhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccc----------cHHH-----HHH-HHCcC-
Confidence               2335789999999862   1  1  1 244568899999999999865          3555     455 56676 


Q ss_pred             ccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679          339 TPVPGGVGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       339 TPVPGGVGp~T~amLl~N~v~a~~~~~~~  367 (368)
                       ++-+|.+     ||++|.+.+++.|+|.
T Consensus       145 -~~i~Gl~-----Mli~Qa~~~f~iwtg~  167 (182)
T d1vi2a1         145 -KTIDGYG-----MLLWQGAEQFTLWTGK  167 (182)
T ss_dssp             -EEECHHH-----HHHHHHHHHHHHHHSS
T ss_pred             -eEeccHH-----HHHHHHHHHHHHHhCC
Confidence             4455666     9999999999999986

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.52  E-value=1.2e-14  Score=127.29  Aligned_cols=126  Identities=22%  Similarity=0.284  Sum_probs=101.5

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------------CHhhh
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------------NPEQI  272 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------------~L~~~  272 (368)
                      .|+++.|++++.+++||+|+|+|+|++ +|+++..|.+.| .|+|++|+..                        ++...
T Consensus         3 ~G~~~~l~~~~~~~~~k~vlIlGaGG~-arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (177)
T d1nvta1           3 IGARMALEEEIGRVKDKNIVIYGAGGA-ARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVD   80 (177)
T ss_dssp             HHHHHHHHHHHCCCCSCEEEEECCSHH-HHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCC
T ss_pred             HHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhc
Confidence            789999999999999999999999997 999999998776 9999999732                        23345


Q ss_pred             ccCCCEEEEecCCC---C-----cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCc
Q 017679          273 TSEADIVIAAAGVA---N-----LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGG  344 (368)
Q Consensus       273 ~~~ADIVIsAvG~p---~-----~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGG  344 (368)
                      ...+|++|++|+..   .     .++.+.++++.+|+|+.|+|.+          +.|+     ..+ +.+|+  ++-+|
T Consensus        81 ~~~~dliIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p~~----------T~l~-----~~a-~~~G~--~~i~G  142 (177)
T d1nvta1          81 LDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLE----------TVLL-----KEA-KKVNA--KTING  142 (177)
T ss_dssp             CTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSS----------CHHH-----HHH-HTTTC--EEECT
T ss_pred             cchhhhhccCCcccccccccccchhhhhccCcccceeeecCCcHh----------HHHH-----HHH-HHCCC--cccCC
Confidence            67899999998742   1     2566788899999999999865          2455     444 55666  44456


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCC
Q 017679          345 VGPMTVAMLLSNTLDSAKRAYGF  367 (368)
Q Consensus       345 VGp~T~amLl~N~v~a~~~~~~~  367 (368)
                      .+     ||++|.+.+++.|+|.
T Consensus       143 l~-----MLv~Qa~~qf~lwtg~  160 (177)
T d1nvta1         143 LG-----MLIYQGAVAFKIWTGV  160 (177)
T ss_dssp             HH-----HHHHHHHHHHHHHHSS
T ss_pred             HH-----HHHHHHHHHHHHHHCC
Confidence            65     9999999999999986

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=99.51  E-value=4e-15  Score=129.80  Aligned_cols=127  Identities=12%  Similarity=0.176  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCCC---Hh----------hhccCCCEEEE
Q 017679          216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTKN---PE----------QITSEADIVIA  281 (368)
Q Consensus       216 a~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~~---L~----------~~~~~ADIVIs  281 (368)
                      ..|+.++|++++++ ++|+|+|+|+|++ ||+++..|.+.|+ +|+|++|+.+.   |.          ....++|+||+
T Consensus         2 ~~G~~~~l~~~~~~-~~~~vlIlGaGGa-arai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~~~~DliIN   79 (167)
T d1npya1           2 YIAIVKLIEKYHLN-KNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADILVN   79 (167)
T ss_dssp             HHHHHHHHHHTTCC-TTSCEEEECSSTT-HHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTTCCCSEEEE
T ss_pred             hHHHHHHHHHcCCC-CCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccccchhhhee
Confidence            37999999999998 8999999999998 9999999999997 79999987421   11          12367899999


Q ss_pred             ecCC---CCc------ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHH
Q 017679          282 AAGV---ANL------VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAM  352 (368)
Q Consensus       282 AvG~---p~~------I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~am  352 (368)
                      ||+.   |+.      ++...++++.+|+|+.|+|.+          ++|.     ..+ +..|+  ++-+|.+     |
T Consensus        80 aTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P~~----------T~ll-----~~A-~~~G~--~~i~Gl~-----M  136 (167)
T d1npya1          80 VTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVE----------TPFI-----RYA-QARGK--QTISGAA-----V  136 (167)
T ss_dssp             CSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSS----------CHHH-----HHH-HHTTC--EEECHHH-----H
T ss_pred             ccccCCccccccccccccHhhcCCcceEEEEeeccCC----------CHHH-----HHH-HHCCC--eEEECHH-----H
Confidence            9862   221      344567889999999999875          3566     555 45665  4455666     9


Q ss_pred             HHHHHHHHHHHHhCC
Q 017679          353 LLSNTLDSAKRAYGF  367 (368)
Q Consensus       353 Ll~N~v~a~~~~~~~  367 (368)
                      |++|.+.+++.|+|.
T Consensus       137 li~Qa~~~f~lwtg~  151 (167)
T d1npya1         137 IVLQAVEQFELYTHQ  151 (167)
T ss_dssp             HHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhCC
Confidence            999999999999986

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=99.42  E-value=3.9e-14  Score=124.05  Aligned_cols=128  Identities=18%  Similarity=0.194  Sum_probs=98.3

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHh-------------------hhccCCC
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPE-------------------QITSEAD  277 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~-------------------~~~~~AD  277 (368)
                      .|+++.|++.+++++||+|+|+|+|++ +|+++..|.+.+.+|+|++|+....+                   ..+.++|
T Consensus         3 ~Gf~~~l~~~~~~~~~k~vlIlGaGGa-arai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~d   81 (171)
T d1p77a1           3 IGLVTDLQRLNWLRPNQHVLILGAGGA-TKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYD   81 (171)
T ss_dssp             HHHHHHHHHTTCCCTTCEEEEECCSHH-HHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCS
T ss_pred             HHHHHHHHHcCCCCCCCEEEEECCcHH-HHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccccccccc
Confidence            789999999999999999999999998 99999999988889999999742111                   1256899


Q ss_pred             EEEEecCCC--C-c--ccCCCcCCCcEEEEeec-CCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHH
Q 017679          278 IVIAAAGVA--N-L--VRGSWLKPGAVVLDVGT-CPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVA  351 (368)
Q Consensus       278 IVIsAvG~p--~-~--I~~e~ik~gavVIDvg~-n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~a  351 (368)
                      +||++|+.-  + .  ...+.++++.+++|+.| +|.+          +.|.     ..+ +..|+- .+.+|.+     
T Consensus        82 iiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~----------T~~l-----~~A-~~~g~~-~v~~Gl~-----  139 (171)
T d1p77a1          82 LVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTD----------TPFI-----ALC-KSLGLT-NVSDGFG-----  139 (171)
T ss_dssp             EEEECCCC-------CCCHHHHHHCSCEEESCCCTTSC----------CHHH-----HHH-HHTTCC-CEECSHH-----
T ss_pred             eeeecccccccccccchhhhhhcccceeeeeeccCccc----------HHHH-----HHH-HHcCCC-cccCcHH-----
Confidence            999998742  1 1  23445678899999999 5654          3455     444 445542 3556676     


Q ss_pred             HHHHHHHHHHHHHhCC
Q 017679          352 MLLSNTLDSAKRAYGF  367 (368)
Q Consensus       352 mLl~N~v~a~~~~~~~  367 (368)
                      ||++|.+.+++.|+|.
T Consensus       140 Ml~~Qa~~~f~iwtg~  155 (171)
T d1p77a1         140 MLVAQAAHSFHLWRGV  155 (171)
T ss_dssp             HHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHCC
Confidence            9999999999999986

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=99.24  E-value=3.6e-12  Score=110.45  Aligned_cols=94  Identities=14%  Similarity=0.188  Sum_probs=80.9

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-----------------CCHhhhccCC
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-----------------KNPEQITSEA  276 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-----------------~~L~~~~~~A  276 (368)
                      .+.++++++++...++++|+|+|||+|++ |+.++..|..+|+ .+++++|+.                 .++.+.+.++
T Consensus         7 v~~aAv~la~~~~~~l~~~~ilviGaG~~-g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~   85 (159)
T d1gpja2           7 IGSAAVELAERELGSLHDKTVLVVGAGEM-GKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARS   85 (159)
T ss_dssp             HHHHHHHHHHHHHSCCTTCEEEEESCCHH-HHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTC
T ss_pred             HHHHHHHHHHHHhCCcccCeEEEECCCHH-HHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccC
Confidence            46788899988877999999999999987 9999999999998 799999873                 3677888999


Q ss_pred             CEEEEecCCCCc-ccCCCcC---------CCcEEEEeecCCCC
Q 017679          277 DIVIAAAGVANL-VRGSWLK---------PGAVVLDVGTCPVD  309 (368)
Q Consensus       277 DIVIsAvG~p~~-I~~e~ik---------~gavVIDvg~n~~~  309 (368)
                      ||||+||+.|+. |++++++         ...++||+|+++.-
T Consensus        86 Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~v  128 (159)
T d1gpja2          86 DVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDV  128 (159)
T ss_dssp             SEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSB
T ss_pred             CEEEEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCCCc
Confidence            999999999986 7888874         24599999998753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=4.3e-10  Score=98.00  Aligned_cols=92  Identities=25%  Similarity=0.378  Sum_probs=79.1

Q ss_pred             HHHH-HHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEe
Q 017679          217 KGCI-ELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAA  282 (368)
Q Consensus       217 ~gv~-~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsA  282 (368)
                      +.++ .+++..+..+.||+|+|+|.|.+ ||.+|..|...||+|+++....             ..+++.+..||++|++
T Consensus         8 ~S~~~~~~r~t~~~l~Gk~v~V~GyG~i-G~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~~~~a~~~adivvta   86 (163)
T d1li4a1           8 ESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTT   86 (163)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC
T ss_pred             hhHHHHHHHHhCceecCCEEEEeccccc-cHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeeehhhhhhhccEEEec
Confidence            4444 45566899999999999999985 9999999999999999998752             4688999999999999


Q ss_pred             cCCCCcccCCC---cCCCcEEEEeecCCCC
Q 017679          283 AGVANLVRGSW---LKPGAVVLDVGTCPVD  309 (368)
Q Consensus       283 vG~p~~I~~e~---ik~gavVIDvg~n~~~  309 (368)
                      ||.++.|+.++   +|+|+++..+|....|
T Consensus        87 TGn~~vI~~eh~~~MKdgaIL~N~Ghfd~E  116 (163)
T d1li4a1          87 TGCIDIILGRHFEQMKDDAIVCNIGHFDVE  116 (163)
T ss_dssp             SSCSCSBCHHHHTTCCTTEEEEECSSSTTS
T ss_pred             CCCccchhHHHHHhccCCeEEEEeccccce
Confidence            99999998876   5889999999976544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=99.02  E-value=3.3e-10  Score=98.60  Aligned_cols=90  Identities=21%  Similarity=0.266  Sum_probs=78.2

Q ss_pred             HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCC
Q 017679          219 CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       219 v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      +--+++..+.-+.||+++|+|.|.+ ||.+|+.|...||.|+++....             ..+.+.++.|||+|+|||.
T Consensus        10 ~d~i~r~t~~~laGk~vvV~GYG~v-GrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          10 PDGLMRATDFLISGKIVVICGYGDV-GKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             HHHHHHHHCCCCTTSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSS
T ss_pred             HHHHHHHhCceecCCEEEEeccccc-chhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCchhHccccCcEEEEcCCC
Confidence            3345567799999999999999985 9999999999999999997652             4788999999999999999


Q ss_pred             CCcccCCC---cCCCcEEEEeecCCCC
Q 017679          286 ANLVRGSW---LKPGAVVLDVGTCPVD  309 (368)
Q Consensus       286 p~~I~~e~---ik~gavVIDvg~n~~~  309 (368)
                      ++.|+.++   +|+|++|..+|....|
T Consensus        89 ~~vI~~~h~~~MKdgaIl~N~GHfd~E  115 (163)
T d1v8ba1          89 VDVIKLEHLLKMKNNAVVGNIGHFDDE  115 (163)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSSTTTS
T ss_pred             CccccHHHHHHhhCCeEEEeccccchh
Confidence            99988775   5889999999987655

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.67  E-value=7.5e-09  Score=90.38  Aligned_cols=77  Identities=25%  Similarity=0.324  Sum_probs=65.7

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------CCHhhhccCCCEEEEecC----
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAG----  284 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG----  284 (368)
                      +...+|+|||+|.+ |...+..+.+.||.|++++.+.                     ..+++.+++||+||+++=    
T Consensus        30 v~pa~V~ViGaGva-G~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~  108 (168)
T d1pjca1          30 VKPGKVVILGGGVV-GTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             BCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred             CCCcEEEEECCChH-HHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence            46789999998875 9999999999999999998652                     246788999999998883    


Q ss_pred             -CCCcccCCCc---CCCcEEEEeecCC
Q 017679          285 -VANLVRGSWL---KPGAVVLDVGTCP  307 (368)
Q Consensus       285 -~p~~I~~e~i---k~gavVIDvg~n~  307 (368)
                       .|++|+.+|+   |||+++||+.+..
T Consensus       109 ~aP~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1         109 RAPILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             SCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             ccCeeecHHHHhhcCCCcEEEEeecCC
Confidence             4678999885   7899999999865

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.59  E-value=6.5e-08  Score=84.49  Aligned_cols=82  Identities=22%  Similarity=0.303  Sum_probs=64.9

Q ss_pred             CCHHHHHHHH-HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------
Q 017679          214 CTPKGCIELL-IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------  266 (368)
Q Consensus       214 cTa~gv~~lL-~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------  266 (368)
                      .|+.|.+..+ +..+.+|+||+|+|.|+++-+|+.++..|+++|++|+++.|+.                          
T Consensus         4 ~~~~~~v~~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~   83 (191)
T d1luaa1           4 TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD   83 (191)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH
T ss_pred             ccHHHHHHHHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH
Confidence            4556766666 5669999999999999888889999999999999999998762                          


Q ss_pred             CCHhhhccCCCEEEEecCCC-CcccCCCcC
Q 017679          267 KNPEQITSEADIVIAAAGVA-NLVRGSWLK  295 (368)
Q Consensus       267 ~~L~~~~~~ADIVIsAvG~p-~~I~~e~ik  295 (368)
                      .++++.+.++|+||+++|.+ ..++.+.++
T Consensus        84 ~~~~~~~~~iDilin~Ag~g~~~~~~e~~~  113 (191)
T d1luaa1          84 ASRAEAVKGAHFVFTAGAIGLELLPQAAWQ  113 (191)
T ss_dssp             HHHHHHTTTCSEEEECCCTTCCCBCHHHHH
T ss_pred             HHHHHHhcCcCeeeecCccccccCCHHHHH
Confidence            23557789999999998853 335555443

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.45  E-value=1.2e-07  Score=83.52  Aligned_cols=76  Identities=22%  Similarity=0.254  Sum_probs=61.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------------------------------
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------------------------  267 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------------------------------  267 (368)
                      ...+|+|||+|.+ |...+....+.||.|+++..+..                                           
T Consensus        28 ~pa~VvViGaGva-G~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVA-GLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            4569999998865 99999999999999999975421                                           


Q ss_pred             CHhhhccCCCEEEEecC-----CCCcccCCCc---CCCcEEEEeecCC
Q 017679          268 NPEQITSEADIVIAAAG-----VANLVRGSWL---KPGAVVLDVGTCP  307 (368)
Q Consensus       268 ~L~~~~~~ADIVIsAvG-----~p~~I~~e~i---k~gavVIDvg~n~  307 (368)
                      .+.+.+++||+||+++=     .|.+|+.+|+   |||+++||+++..
T Consensus       107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidq  154 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA  154 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred             HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecC
Confidence            13345889999998883     4667999885   7899999999864

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=98.27  E-value=7.7e-07  Score=77.80  Aligned_cols=77  Identities=25%  Similarity=0.302  Sum_probs=65.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------CCHhhhccCCCEEEEecCC----CCcccCC---C
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------KNPEQITSEADIVIAAAGV----ANLVRGS---W  293 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------~~L~~~~~~ADIVIsAvG~----p~~I~~e---~  293 (368)
                      .+.||++.|||.|.+ |+.++.+|...|++|+.+.+..        .++++.+++||||+.+++.    .++|+.+   .
T Consensus        39 ~l~gk~vgIiG~G~I-G~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~~~~l~~  117 (181)
T d1qp8a1          39 LIQGEKVAVLGLGEI-GTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLAL  117 (181)
T ss_dssp             CCTTCEEEEESCSTH-HHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred             cccCceEEEeccccc-cccceeeeeccccccccccccccccceeeeechhhhhhccchhhcccccccccccccccceeee
Confidence            479999999999997 9999999999999999998753        4688999999999988863    3467654   4


Q ss_pred             cCCCcEEEEeecC
Q 017679          294 LKPGAVVLDVGTC  306 (368)
Q Consensus       294 ik~gavVIDvg~n  306 (368)
                      +|+|+++|++|--
T Consensus       118 mk~~ailIN~~RG  130 (181)
T d1qp8a1         118 MAEDAVFVNVGRA  130 (181)
T ss_dssp             SCTTCEEEECSCG
T ss_pred             ccccceEEecccc
Confidence            6899999999854

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=98.16  E-value=1.2e-06  Score=77.71  Aligned_cols=81  Identities=17%  Similarity=0.304  Sum_probs=67.3

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------CCHhhhccCCCEEEEecCC----CCcccC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGV----ANLVRG  291 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------~~L~~~~~~ADIVIsAvG~----p~~I~~  291 (368)
                      +.++.||+|.|||.|.+ |+.+|.+|...|++|..+....           .++.+.+++||+|+.+++-    -++|..
T Consensus        38 g~el~gk~vgIiG~G~I-G~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~~  116 (197)
T d1j4aa1          38 GREVRDQVVGVVGTGHI-GQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMIND  116 (197)
T ss_dssp             BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSH
T ss_pred             CccccCCeEEEeccccc-chhHHHhHhhhcccccccCcccccccccceeeeccccccccccccccccCCccccccccccH
Confidence            45789999999999997 9999999999999999887542           4788999999999988862    346776


Q ss_pred             CC---cCCCcEEEEeecCCC
Q 017679          292 SW---LKPGAVVLDVGTCPV  308 (368)
Q Consensus       292 e~---ik~gavVIDvg~n~~  308 (368)
                      +.   +|+|+++|.+|--.+
T Consensus       117 ~~l~~mk~~a~lIN~sRG~i  136 (197)
T d1j4aa1         117 ESIAKMKQDVVIVNVSRGPL  136 (197)
T ss_dssp             HHHHHSCTTEEEEECSCGGG
T ss_pred             HHHhhhCCccEEEecCchhh
Confidence            64   589999999986543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=98.10  E-value=2.2e-06  Score=75.60  Aligned_cols=83  Identities=16%  Similarity=0.256  Sum_probs=68.8

Q ss_pred             HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCC----CC
Q 017679          225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----AN  287 (368)
Q Consensus       225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~----p~  287 (368)
                      ..+.++.||++.|||.|.+ |+.+|.+|...|++|..+.+..             .+|.+.+++||+|+..++-    -+
T Consensus        42 ~~~~eL~gktvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~~T~~  120 (193)
T d1mx3a1          42 SGAARIRGETLGIIGLGRV-GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHH  120 (193)
T ss_dssp             TTCCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTT
T ss_pred             cCceeeeCceEEEeccccc-cccceeeeeccccceeeccCcccccchhhhccccccchhhccccCCEEEEeecccccchh
Confidence            3467899999999999997 9999999999999999987652             3688999999999988762    23


Q ss_pred             cccCC---CcCCCcEEEEeecCCC
Q 017679          288 LVRGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       288 ~I~~e---~ik~gavVIDvg~n~~  308 (368)
                      +|..+   .+|+|+++|.+|--.+
T Consensus       121 li~~~~l~~mk~~a~lIN~sRG~i  144 (193)
T d1mx3a1         121 LINDFTVKQMRQGAFLVNTARGGL  144 (193)
T ss_dssp             SBSHHHHTTSCTTEEEEECSCTTS
T ss_pred             hhhHHHHhccCCCCeEEecCCceE
Confidence            56654   6789999999996554

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=98.00  E-value=3.8e-06  Score=74.16  Aligned_cols=81  Identities=20%  Similarity=0.304  Sum_probs=67.7

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------CCHhhhccCCCEEEEecCC----CCcccCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV----ANLVRGS  292 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------~~L~~~~~~ADIVIsAvG~----p~~I~~e  292 (368)
                      +.++.||++.|||.|.+ |+.++.+|..-|++|..++++.          .++.+.++++|+|+..++.    -++|+.+
T Consensus        40 ~~~l~~ktvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~~~D~v~~~~plt~~T~~li~~~  118 (199)
T d1dxya1          40 GKELGQQTVGVMGTGHI-GQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEA  118 (199)
T ss_dssp             CCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHH
T ss_pred             cccccceeeeeeecccc-cccccccccccceeeeccCCccchhhhcchhHHHHHHHHHhcccceeeecccccccccccHH
Confidence            46899999999999997 9999999999999999998653          2688899999999988763    2367766


Q ss_pred             C---cCCCcEEEEeecCCC
Q 017679          293 W---LKPGAVVLDVGTCPV  308 (368)
Q Consensus       293 ~---ik~gavVIDvg~n~~  308 (368)
                      .   +|+|+++|.+|--.+
T Consensus       119 ~l~~mk~~a~lIN~aRG~v  137 (199)
T d1dxya1         119 AFNLMKPGAIVINTARPNL  137 (199)
T ss_dssp             HHHHSCTTEEEEECSCTTS
T ss_pred             HhhccCCceEEEecccHhh
Confidence            4   589999999996554

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.99  E-value=4.4e-06  Score=72.82  Aligned_cols=81  Identities=22%  Similarity=0.330  Sum_probs=67.4

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecC-C---CCccc
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAG-V---ANLVR  290 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG-~---p~~I~  290 (368)
                      +.++.||++.|+|.|.+ |+.++.+|...|++|....++.            .++++.+++||||+..++ .   .++|+
T Consensus        39 ~~~l~~k~vgiiG~G~I-G~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~T~~lin  117 (184)
T d1ygya1          39 GTEIFGKTVGVVGLGRI-GQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLID  117 (184)
T ss_dssp             BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred             cccccceeeeeccccch-hHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCchhhhhhh
Confidence            45789999999999987 9999999999999999887653            367889999999998886 2   34676


Q ss_pred             CC---CcCCCcEEEEeecCCC
Q 017679          291 GS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~e---~ik~gavVIDvg~n~~  308 (368)
                      .+   .+|+|+++|.+|--.+
T Consensus       118 ~~~l~~mk~~a~lIN~sRG~i  138 (184)
T d1ygya1         118 KEALAKTKPGVIIVNAARGGL  138 (184)
T ss_dssp             HHHHTTSCTTEEEEECSCTTS
T ss_pred             HHHHhhhCCCceEEEecchhh
Confidence            65   4689999999996554

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=6.1e-06  Score=71.93  Aligned_cols=81  Identities=20%  Similarity=0.297  Sum_probs=68.4

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------CCHhhhccCCCEEEEecCC-C---CcccCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV-A---NLVRGS  292 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------~~L~~~~~~ADIVIsAvG~-p---~~I~~e  292 (368)
                      +.++.||++.|||.|.+ |+.++.+|...|++|+...++.          .++++.+++||||+.+.+- +   ++|+.+
T Consensus        39 ~~~l~~~~vgiiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~sDii~i~~plt~~T~~li~~~  117 (188)
T d1sc6a1          39 SFEARGKKLGIIGYGHI-GTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAK  117 (188)
T ss_dssp             CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHH
T ss_pred             cccccceEEEEeecccc-hhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhhccceeecccCCcchhhhccHH
Confidence            45789999999999997 9999999999999999997653          3689999999999988873 2   467776


Q ss_pred             C---cCCCcEEEEeecCCC
Q 017679          293 W---LKPGAVVLDVGTCPV  308 (368)
Q Consensus       293 ~---ik~gavVIDvg~n~~  308 (368)
                      .   +++|+++|.++--.+
T Consensus       118 ~l~~mk~~a~lIN~aRG~l  136 (188)
T d1sc6a1         118 EISLMKPGSLLINASRGTV  136 (188)
T ss_dssp             HHHHSCTTEEEEECSCSSS
T ss_pred             HHhhCCCCCEEEEcCcHHh
Confidence            4   589999999997654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=97.94  E-value=8.8e-06  Score=70.91  Aligned_cols=82  Identities=12%  Similarity=0.215  Sum_probs=68.0

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC----CC
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV----AN  287 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~----p~  287 (368)
                      .+.+++|+++.|||.|.+ |+.++.+|...|++|....+..              .++.+.+++||+|+..++-    -+
T Consensus        38 ~~~~l~~~~vgiiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~T~~  116 (188)
T d2naca1          38 HAYDLEAMHVGTVAAGRI-GLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEH  116 (188)
T ss_dssp             TCCCCTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTT
T ss_pred             cceeccccceeecccccc-chhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccccchh
Confidence            467899999999999987 9999999999999999987642              4688999999999988872    24


Q ss_pred             cccCC---CcCCCcEEEEeecCCC
Q 017679          288 LVRGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       288 ~I~~e---~ik~gavVIDvg~n~~  308 (368)
                      +|..+   .+|+|+++|.++--.+
T Consensus       117 li~~~~l~~mk~ga~lIN~aRG~i  140 (188)
T d2naca1         117 MINDETLKLFKRGAYIVNTARGKL  140 (188)
T ss_dssp             CBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             hhHHHHHHhCCCCCEEEecCchhh
Confidence            67654   5689999999986543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.84  E-value=3.7e-06  Score=69.92  Aligned_cols=76  Identities=16%  Similarity=0.152  Sum_probs=57.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------CHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------~L~~~~~~ADIVIsAvG~p~  287 (368)
                      ++|+|+|||+|.+ |+++|..|.++|.+|++++|+..                       .+...+..+|++|++++...
T Consensus         1 ~~K~IliiGaG~~-G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~   79 (182)
T d1e5qa1           1 ATKSVLMLGSGFV-TRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF   79 (182)
T ss_dssp             CCCEEEEECCSTT-HHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGG
T ss_pred             CCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchh
Confidence            4799999999875 99999999999999999998731                       23456788899998876432


Q ss_pred             c--ccCCCcCCCcEEEEeecCC
Q 017679          288 L--VRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 ~--I~~e~ik~gavVIDvg~n~  307 (368)
                      .  +.....+.+..++|+.+.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~  101 (182)
T d1e5qa1          80 HATVIKSAIRQKKHVVTTSYVS  101 (182)
T ss_dssp             HHHHHHHHHHHTCEEECSSCCC
T ss_pred             hhHHHHHHHhhccceeecccCc
Confidence            1  2334456678888888654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=97.83  E-value=1.3e-05  Score=70.40  Aligned_cols=82  Identities=15%  Similarity=0.171  Sum_probs=67.5

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC-C---C
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV-A---N  287 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~-p---~  287 (368)
                      .+.++.||++.|||.|.+ |+.++.+|...|+.|..+.+..              .++.+.+++||+|+..++- +   +
T Consensus        41 ~~~~l~g~tvgIiG~G~I-G~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~  119 (191)
T d1gdha1          41 VGEKLDNKTLGIYGFGSI-GQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRY  119 (191)
T ss_dssp             CBCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTT
T ss_pred             ccceecccceEEeecccc-hHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhh
Confidence            356789999999999997 9999999999999999887542              3688999999999988862 2   4


Q ss_pred             cccCC---CcCCCcEEEEeecCCC
Q 017679          288 LVRGS---WLKPGAVVLDVGTCPV  308 (368)
Q Consensus       288 ~I~~e---~ik~gavVIDvg~n~~  308 (368)
                      +|+.+   .+|+|+++|.++--.+
T Consensus       120 li~~~~l~~mk~~a~lIN~sRG~i  143 (191)
T d1gdha1         120 FFNKATIKSLPQGAIVVNTARGDL  143 (191)
T ss_dssp             CBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             eecHHHhhCcCCccEEEecCCccc
Confidence            67654   5689999999996554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=9.6e-06  Score=62.64  Aligned_cols=37  Identities=24%  Similarity=0.329  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +++||+|+|+|.|.. |+.+|.+|.++|+.|+++..+.
T Consensus         2 ~~~~K~v~ViGlG~s-G~s~a~~L~~~g~~v~~~D~~~   38 (93)
T d2jfga1           2 DYQGKNVVIIGLGLT-GLSCVDFFLARGVTPRVMDTRM   38 (93)
T ss_dssp             CCTTCCEEEECCSHH-HHHHHHHHHHTTCCCEEEESSS
T ss_pred             CcCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEeeCCc
Confidence            589999999999998 9999999999999999998764

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.75  E-value=2.2e-05  Score=65.98  Aligned_cols=71  Identities=17%  Similarity=0.197  Sum_probs=57.4

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-----------------------------CCCHhhhccCCCEEEEe
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-----------------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-----------------------------t~~L~~~~~~ADIVIsA  282 (368)
                      .|+++|||+|.+ |.++|..|.+.|..|++..+.                             +.++.+.+++||+||.+
T Consensus         1 sk~iaIiGaG~~-G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGLGNG-GHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CCEEEEECccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            389999999876 999999999999999999874                             13677889999999999


Q ss_pred             cCCCCc---cc--CCCcCCCcEEEEe
Q 017679          283 AGVANL---VR--GSWLKPGAVVLDV  303 (368)
Q Consensus       283 vG~p~~---I~--~e~ik~gavVIDv  303 (368)
                      +.....   +.  .++++++.+|+..
T Consensus        80 v~~~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          80 VPAIHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             SCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             EchhHHHHHHHHhhhccCCCCEEEEe
Confidence            976542   21  3578888888754

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.73  E-value=2.2e-05  Score=65.01  Aligned_cols=77  Identities=18%  Similarity=0.228  Sum_probs=61.8

Q ss_pred             CCccceEEEEc-cCccchHHHHHHHhhCCCEEEEEeCCCC-CHhhhccCCCEEEEecCCCCc---c--cCCCcCCCcEEE
Q 017679          229 EIMGKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQITSEADIVIAAAGVANL---V--RGSWLKPGAVVL  301 (368)
Q Consensus       229 ~l~GK~VvVIG-~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~~~~~~ADIVIsAvG~p~~---I--~~e~ik~gavVI  301 (368)
                      +..-|+|.||| .|.+ |.++|..|.+.|.+|+++++... ...+....+|+++.++.....   +  -.+.++++++++
T Consensus         6 ~~~~~kI~iIGg~G~m-G~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iii   84 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKL-GGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLA   84 (152)
T ss_dssp             CTTCCCEEEETTTSHH-HHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEE
T ss_pred             CCCCCeEEEEcCCCHH-HHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEE
Confidence            44568999999 6775 99999999999999999998764 455678999999999875442   1  234568899999


Q ss_pred             EeecC
Q 017679          302 DVGTC  306 (368)
Q Consensus       302 Dvg~n  306 (368)
                      |++..
T Consensus        85 D~~Sv   89 (152)
T d2pv7a2          85 DLTSV   89 (152)
T ss_dssp             ECCSC
T ss_pred             Eeccc
Confidence            99964

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.71  E-value=2.1e-05  Score=66.23  Aligned_cols=73  Identities=19%  Similarity=0.281  Sum_probs=59.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----c-cCC--
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-RGS--  292 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I-~~e--  292 (368)
                      ||-|||.|.+ |.++|..|++.|.+|++++++.              .+..+.++++|+||++++.+.-    + ..+  
T Consensus         2 kIgiIGlG~M-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           2 KVGFIGLGIM-GKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEEehhHH-HHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            6899999986 9999999999999999998864              3567889999999999986542    2 222  


Q ss_pred             --CcCCCcEEEEeecCC
Q 017679          293 --WLKPGAVVLDVGTCP  307 (368)
Q Consensus       293 --~ik~gavVIDvg~n~  307 (368)
                        ..++|.++||+++..
T Consensus        81 ~~~~~~g~iiid~sT~~   97 (161)
T d1vpda2          81 IEGAKPGTVLIDMSSIA   97 (161)
T ss_dssp             HHHCCTTCEEEECSCCC
T ss_pred             hhccCCCCEEEECCCCC
Confidence              357899999999754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.61  E-value=3.7e-05  Score=64.80  Aligned_cols=74  Identities=20%  Similarity=0.364  Sum_probs=60.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----c-cC--
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-RG--  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I-~~--  291 (368)
                      ++|.+||-|.+ |.++|..|++.|.+|++++++.              .++.+.++++|+|++++..+..    + ..  
T Consensus         2 ~kIg~IGlG~M-G~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           2 KQIAFIGLGHM-GAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             CEEEEEEEHHH-HHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            57999999986 9999999999999999998862              4678999999999999985431    1 11  


Q ss_pred             --CCcCCCcEEEEeecCC
Q 017679          292 --SWLKPGAVVLDVGTCP  307 (368)
Q Consensus       292 --e~ik~gavVIDvg~n~  307 (368)
                        ..+++|.++||++...
T Consensus        81 ~~~~l~~g~iiid~st~~   98 (162)
T d3cuma2          81 LLAHIAPGTLVLECSTIA   98 (162)
T ss_dssp             HHHHSCTTCEEEECSCCC
T ss_pred             ccccCCCCCEEEECCCCC
Confidence              2467899999998753

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.45  E-value=5.1e-05  Score=63.49  Aligned_cols=72  Identities=21%  Similarity=0.196  Sum_probs=56.3

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------CHhhhccCCCEEEEecCCCC---ccc--CCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITSEADIVIAAAGVAN---LVR--GSW  293 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~L~~~~~~ADIVIsAvG~p~---~I~--~e~  293 (368)
                      ||.|||.|.+ |..+|..|.+.|.+|+.++++..               +..+.+++||+||.++....   .+.  .+.
T Consensus         2 kI~iIG~G~m-G~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~~~~~~vl~~l~~~   80 (165)
T d2f1ka2           2 KIGVVGLGLI-GASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQLILPTLEKLIPH   80 (165)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCHHHHHHHHHHHGGG
T ss_pred             EEEEEeecHH-HHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcHhhhhhhhhhhhhh
Confidence            6899999886 99999999999999999987531               23467899999999986321   121  356


Q ss_pred             cCCCcEEEEeecC
Q 017679          294 LKPGAVVLDVGTC  306 (368)
Q Consensus       294 ik~gavVIDvg~n  306 (368)
                      ++++.+|+|++.-
T Consensus        81 l~~~~iv~~~~s~   93 (165)
T d2f1ka2          81 LSPTAIVTDVASV   93 (165)
T ss_dssp             SCTTCEEEECCSC
T ss_pred             cccccceeecccc
Confidence            8899999999843

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.41  E-value=0.00013  Score=57.82  Aligned_cols=59  Identities=14%  Similarity=0.223  Sum_probs=45.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CC-----------------HhhhccCCCEEEEecCCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KN-----------------PEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~-----------------L~~~~~~ADIVIsAvG~p~  287 (368)
                      ++++||+|+|||.|.+ |..-+..|++.||+|++..... ++                 -.+.+..+|+|+.+++.+.
T Consensus         8 l~l~~k~vlVvG~G~v-a~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~   84 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGDV-AERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT   84 (113)
T ss_dssp             ECCBTCEEEEECCSHH-HHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH
T ss_pred             EEeCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCCHH
Confidence            5799999999999885 9999999999999999986542 11                 1234666788888777653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=97.32  E-value=0.00021  Score=63.00  Aligned_cols=92  Identities=18%  Similarity=0.253  Sum_probs=62.5

Q ss_pred             CCHHHHHHHHH----HhCC-CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhh-cc
Q 017679          214 CTPKGCIELLI----RSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQI-TS  274 (368)
Q Consensus       214 cTa~gv~~lL~----~~~i-~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~-~~  274 (368)
                      +|+.|+...++    +.+. +|+||+|+|-|.|+ ||..+|.+|.+.|++|+++.....             +..+. ..
T Consensus         4 ~Ta~Gv~~~~~~~~~~~g~~~L~gk~v~IqG~G~-VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~   82 (201)
T d1c1da1           4 TTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGA-VGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLST   82 (201)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGC
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccCccccccc
Confidence            57777766554    5576 69999999999998 599999999999999999976531             23344 35


Q ss_pred             CCCEEEEecCCCCcccCCCcCC--CcEEEEeecCC
Q 017679          275 EADIVIAAAGVANLVRGSWLKP--GAVVLDVGTCP  307 (368)
Q Consensus       275 ~ADIVIsAvG~p~~I~~e~ik~--gavVIDvg~n~  307 (368)
                      ++||++-|. ..+.|+.+.++.  -.+|+.-+-+|
T Consensus        83 ~~DI~iPcA-~~~~I~~~~a~~i~ak~i~e~AN~p  116 (201)
T d1c1da1          83 PCDVFAPCA-MGGVITTEVARTLDCSVVAGAANNV  116 (201)
T ss_dssp             CCSEEEECS-CSCCBCHHHHHHCCCSEECCSCTTC
T ss_pred             cceeeeccc-ccccccHHHHhhhhhheeeccCCCC
Confidence            789988543 334565543321  23454444333

>d1vi2a2 c.58.1.5 (A:5-106) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=8.9e-05  Score=58.63  Aligned_cols=69  Identities=17%  Similarity=0.163  Sum_probs=51.7

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCccee
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPLNI  199 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~N~  199 (368)
                      .+++.++++.|++..|..++.  ++++|.+.++.+.+ .++.|++|++|++     +++++.++. +.++..+..+|.
T Consensus        20 ~ihn~~f~~~gi~~~Y~~~~v--~~~~l~~~~~~l~~-~~~~G~nVT~P~K-----~~~~~~~d~~~~~a~~igAvNt   89 (102)
T d1vi2a2          20 EMQNKALEKAGLPFTYMAFEV--DNDSFPGAIEGLKA-LKMRGTGVSMPNK-----QLACEYVDELTPAAKLVGAINT   89 (102)
T ss_dssp             HHHHHHHHHTTCSEEEEEEEC--CTTTHHHHHHHHHH-TTCCEEEECTTST-----TGGGGGCSEECHHHHHHTCCSE
T ss_pred             HHHHHHHHHcCCCcEEeeEee--CchHHHHHHHHhhh-hccchhhhhhHHH-----HHHHHhcccCCHHHHhhCcEEE
Confidence            578999999999999998854  55678888888876 4799999999999     344555543 344444556664

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.26  E-value=0.00012  Score=62.10  Aligned_cols=95  Identities=18%  Similarity=0.257  Sum_probs=70.6

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPE  270 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~  270 (368)
                      .++|.+..+...+++..-.-.|.+|+|+|+|. ||..+++++...|| +|+++.+..                   .+..
T Consensus         8 ~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~-iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~   86 (182)
T d1vj0a2           8 MAMCSGATAYHAFDEYPESFAGKTVVIQGAGP-LGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVE   86 (182)
T ss_dssp             HHTTHHHHHHHHHHTCSSCCBTCEEEEECCSH-HHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHH
T ss_pred             HhhcHHHHHHHHHHHHhCCCCCCEEEEECCCc-cchhheecccccccccccccccccccccccccccceEEEeccccchH
Confidence            35788888888887776555799999999976 59999999999998 788886542                   1222


Q ss_pred             hh---c------cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679          271 QI---T------SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ~~---~------~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      +.   +      .-+|+||.++|.+..+.  -+.+++|..++=+|..
T Consensus        87 ~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~  133 (182)
T d1vj0a2          87 ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVA  133 (182)
T ss_dssp             HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCC
T ss_pred             HHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeec
Confidence            21   1      13799999999887543  4677888888888854

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.21  E-value=0.00025  Score=59.11  Aligned_cols=71  Identities=13%  Similarity=0.118  Sum_probs=56.3

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCccc--CCCcCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVANLVR--GSWLKP  296 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~I~--~e~ik~  296 (368)
                      |+.+||.|.. |.+++..|.+.|.+|++++++.               .+.++.++++|+||.++. |..+.  -+.+++
T Consensus         2 kIg~IG~G~m-G~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavk-p~~~~~vl~~l~~   79 (152)
T d2ahra2           2 KIGIIGVGKM-ASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVLKPLHF   79 (152)
T ss_dssp             EEEEECCSHH-HHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHHTTSCC
T ss_pred             EEEEEeccHH-HHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecc-hHhHHHHhhhccc
Confidence            6899999986 9999999999999999998762               467788999999999984 54321  134678


Q ss_pred             CcEEEEeecC
Q 017679          297 GAVVLDVGTC  306 (368)
Q Consensus       297 gavVIDvg~n  306 (368)
                      +.+||++...
T Consensus        80 ~~~iis~~ag   89 (152)
T d2ahra2          80 KQPIISMAAG   89 (152)
T ss_dssp             CSCEEECCTT
T ss_pred             ceeEeccccc
Confidence            8889888643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00028  Score=60.53  Aligned_cols=57  Identities=19%  Similarity=0.231  Sum_probs=47.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      ..|||+|+|+++-+|+.++..|+++|.+|++..|+.                     .++.+.++.+|+||.++|...
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~   79 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN   79 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCC
Confidence            468999999999899999999999999999998753                     135577899999999988543

>d1npya2 c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.16  E-value=0.00029  Score=55.56  Aligned_cols=83  Identities=17%  Similarity=0.266  Sum_probs=58.5

Q ss_pred             CEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhc
Q 017679          105 PGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDA  184 (368)
Q Consensus       105 P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~  184 (368)
                      .++.+.+. .+|.|.+ =++++.+++++|++++|..++.+    ++.+.++.+.+ .++.|++|++|++...  .++++.
T Consensus         6 t~~~~~i~-g~P~s~S-P~ihn~~~~~~gi~~~Y~~~~v~----~l~~~~~~~~~-~~~~G~nVT~P~K~~~--~~~~d~   76 (102)
T d1npya2           6 TQLCMSLS-GRPSNFG-TTFHNYLYDKLGLNFIYKAFTTQ----DIEHAIKGVRA-LGIRGCAVSMPFKETC--MPFLDE   76 (102)
T ss_dssp             CEEEEEEC-SSCCSHH-HHHHHHHHHHHTCCEEEEEECCS----CHHHHHHHHHH-HTCCEEEECTTCTTTT--GGGCSE
T ss_pred             CEEEEEEc-CCcccCC-HHHHHHHHHHcCCCeEEeeEecc----cHHHHHHHHhc-cccceeEEehhHHHHH--HHHhhh
Confidence            34544444 4677875 46899999999999999999653    46667777765 4799999999999433  455556


Q ss_pred             CCc-ccccCccCccee
Q 017679          185 VSL-EKDVDGFHPLNI  199 (368)
Q Consensus       185 I~p-~KDVDgl~~~N~  199 (368)
                      +++ .+.   +..+|.
T Consensus        77 ~s~~a~~---igAvNt   89 (102)
T d1npya2          77 IHPSAQA---IESVNT   89 (102)
T ss_dssp             ECHHHHT---TTCCCE
T ss_pred             CChhhhh---cCcEEE
Confidence            655 444   445554

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.08  E-value=0.00019  Score=59.42  Aligned_cols=72  Identities=14%  Similarity=0.106  Sum_probs=54.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCcc---cCCCcCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANLV---RGSWLKP  296 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I---~~e~ik~  296 (368)
                      ||.|||.|.+ |.+++..|.+.|.+|+++++..              .+..+.++++|+||+++......   ..---..
T Consensus         2 kIgiIG~G~m-G~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~~~~~~~~~~~~~~   80 (152)
T d1i36a2           2 RVGFIGFGEV-AQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAARRAGRHV   80 (152)
T ss_dssp             EEEEESCSHH-HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred             EEEEEcHHHH-HHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCchHHHHHHhhcccC
Confidence            6899999986 9999999999999999887654              24567889999999999754321   1000122


Q ss_pred             CcEEEEeecC
Q 017679          297 GAVVLDVGTC  306 (368)
Q Consensus       297 gavVIDvg~n  306 (368)
                      +.++||+...
T Consensus        81 ~~~~id~st~   90 (152)
T d1i36a2          81 RGIYVDINNI   90 (152)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeccCcC
Confidence            6789998754

>d1p77a2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.04  E-value=0.00023  Score=55.95  Aligned_cols=69  Identities=9%  Similarity=-0.003  Sum_probs=51.1

Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCccee
Q 017679          123 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPLNI  199 (368)
Q Consensus       123 ~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~N~  199 (368)
                      .+++.++++.|++..|..++.  +.+++.+.++.+.+ .++.|++|++|++     +++++.++. +..+.-+..+|.
T Consensus        18 ~ihn~~~~~~gi~~~y~~~~v--~~~~~~~~~~~l~~-~~~~G~nVT~P~K-----~~~~~~~d~~~~~a~~igAvNt   87 (101)
T d1p77a2          18 LIQNKLAAQTHQTMEYIAKLG--DLDAFEQQLLAFFE-EGAKGCNITSPFK-----ERAYQLADEYSQRAKLAEACNT   87 (101)
T ss_dssp             HHHHHHHHHTTCCEEEEEEEC--CTTTHHHHHHHHHH-TTCCEEEECTTCH-----HHHHHHCSEECHHHHHHTCCSE
T ss_pred             HHHHHHHHHcCCCcccccccC--CHHHHHHHHHHHHh-ccccceeeccHHH-----HHHHHHhccCCHHHHHcCeeEE
Confidence            468899999999999998854  55688888888875 5799999999998     455555544 333333445553

>d1nyta2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.00013  Score=57.42  Aligned_cols=74  Identities=11%  Similarity=0.125  Sum_probs=54.4

Q ss_pred             ccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccC
Q 017679          117 DSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFH  195 (368)
Q Consensus       117 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~  195 (368)
                      -|.+- .+++.++++.|++..|..+..  .++++.+.++.+.+ .++.|++|++|++     +++++.+|. +..+.-+.
T Consensus        13 hS~SP-~ihn~~~~~~gi~~~y~~~~v--~~~~~~~~~~~l~~-~~~~G~nVT~P~K-----~~~~~~~d~~~~~a~~ig   83 (101)
T d1nyta2          13 HSKSP-FIHQQFAQQLNIEHPYGRVLA--PINDFINTLNAFFS-AGGKGANVTVPFK-----EEAFARADELTERAALAG   83 (101)
T ss_dssp             TCSHH-HHHHHHHHHHTCCCCEEEEEC--CTTCHHHHHHHHHH-TTCCEEEECTTCH-----HHHHHHCSEECHHHHHHT
T ss_pred             cccCH-HHHHHHHHHcCCcchhhhhcC--ChHhHHHHHHHhhh-ccchhheeehHHH-----HHHHHHhccCChHHHHhC
Confidence            34444 478999999999999887743  55688888888875 5799999999998     566666554 44444455


Q ss_pred             ccee
Q 017679          196 PLNI  199 (368)
Q Consensus       196 ~~N~  199 (368)
                      .+|.
T Consensus        84 AvNt   87 (101)
T d1nyta2          84 AVNT   87 (101)
T ss_dssp             CCSE
T ss_pred             cEEE
Confidence            5664

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.01  E-value=0.00023  Score=58.85  Aligned_cols=36  Identities=22%  Similarity=0.360  Sum_probs=32.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ..++||+|+|||.|. ||.--+..|++.||.||++..
T Consensus         9 ~~l~gkrvLViGgG~-va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1           9 HQLKDKRILLIGGGE-VGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             ECCTTCEEEEEEESH-HHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeeCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeC
Confidence            468999999999887 599999999999999999953

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.00044  Score=61.76  Aligned_cols=39  Identities=26%  Similarity=0.263  Sum_probs=35.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+||+++|.|+|.-+|+.+|..|+++|++|.++.++.
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~   39 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN   39 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            368999999999988889999999999999999998763

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.96  E-value=0.00094  Score=56.64  Aligned_cols=96  Identities=23%  Similarity=0.241  Sum_probs=69.5

Q ss_pred             ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCH
Q 017679          210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNP  269 (368)
Q Consensus       210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L  269 (368)
                      .++||.-.-.+..++..++. .|.+|+|+|+|++ |...++++...|+ +|+++.+..                   .++
T Consensus         7 ~~l~~~~~ta~~a~~~a~~~-~g~~VlI~GaG~v-Gl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~   84 (174)
T d1jqba2           7 VMITDMMTTGFHGAELADIE-MGSSVVVIGIGAV-GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHI   84 (174)
T ss_dssp             HTTTTHHHHHHHHHHHTTCC-TTCCEEEECCSHH-HHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCH
T ss_pred             HHhhhHHHHHHHHHHHhCCC-CCCEEEEEcCCcc-hhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhH
Confidence            35677655556667776654 6999999999875 9999999999998 688776542                   222


Q ss_pred             hh----hc--cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecCC
Q 017679          270 EQ----IT--SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       270 ~~----~~--~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n~  307 (368)
                      .+    .+  +-+|+||.++|.+..+.  -+.++++..++-+|...
T Consensus        85 ~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~  130 (174)
T d1jqba2          85 EDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHG  130 (174)
T ss_dssp             HHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred             HHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecC
Confidence            22    22  23899999999987653  45789988888899754

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.00093  Score=55.82  Aligned_cols=94  Identities=16%  Similarity=0.105  Sum_probs=66.2

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC--------------------Hhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------------PEQ  271 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~--------------------L~~  271 (368)
                      ++|-..-++..|++.++ -.|.+|+|+|.|+ ||...++++...||+|++..+....                    ...
T Consensus        12 l~Cag~Tay~al~~~~~-~~G~~VlI~GaG~-vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~   89 (168)
T d1uufa2          12 LLCAGITTYSPLRHWQA-GPGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAA   89 (168)
T ss_dssp             GGTHHHHHHHHHHHTTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHT
T ss_pred             HHhHHHHHHHHHHHhCC-CCCCEEEEeccch-HHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHHH
Confidence            46743334555665554 3699999999876 6999999999999988777654321                    123


Q ss_pred             hccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecCC
Q 017679          272 ITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n~  307 (368)
                      ..+.+|++|.++|.+..+  .-++++++-.++-+|...
T Consensus        90 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  127 (168)
T d1uufa2          90 HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPA  127 (168)
T ss_dssp             TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-
T ss_pred             hcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCC
Confidence            345689999999987654  346788887888888653

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00056  Score=61.08  Aligned_cols=39  Identities=23%  Similarity=0.255  Sum_probs=35.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..|+||+++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~   41 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ   41 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence            468999999999998889999999999999999998764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.88  E-value=0.00071  Score=60.22  Aligned_cols=57  Identities=18%  Similarity=0.338  Sum_probs=47.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC-----------------------HhhhccCCCEEEEecCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-----------------------PEQITSEADIVIAAAGV  285 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~-----------------------L~~~~~~ADIVIsAvG~  285 (368)
                      +|+||+++|.|+|.-+|+.+|..|+++|++|.++.++...                       ..+....-|++|+.+|.
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~   83 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL   83 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecc
Confidence            6899999999999888999999999999999999886421                       22334568999988885

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.88  E-value=0.00037  Score=60.36  Aligned_cols=55  Identities=22%  Similarity=0.318  Sum_probs=46.1

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------------CCCHhhhccCCCEEEEe
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------------t~~L~~~~~~ADIVIsA  282 (368)
                      .=+|++|||+|.. |.++|..|.+.|.+|++..++                            +.++.+.+++||+||.|
T Consensus         6 ~m~KI~ViGaG~w-GtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiia   84 (189)
T d1n1ea2           6 YLNKAVVFGSGAF-GTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFV   84 (189)
T ss_dssp             CEEEEEEECCSHH-HHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEEC
T ss_pred             eeceEEEECCCHH-HHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEc
Confidence            3468999999876 999999999999999998653                            13578889999999999


Q ss_pred             cCCC
Q 017679          283 AGVA  286 (368)
Q Consensus       283 vG~p  286 (368)
                      ++..
T Consensus        85 vPs~   88 (189)
T d1n1ea2          85 IPTQ   88 (189)
T ss_dssp             SCHH
T ss_pred             CcHH
Confidence            9754

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.86  E-value=0.0014  Score=54.76  Aligned_cols=93  Identities=16%  Similarity=0.251  Sum_probs=63.3

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------Hh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PE  270 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~  270 (368)
                      ++|...-.+..|++.++ -.|.+|+|+|.|+ ||..+++++...|++|+++.++...                     .+
T Consensus         9 l~cag~Ta~~al~~~~~-~~g~~vlI~GaG~-vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~   86 (168)
T d1piwa2           9 LLCGGLTVYSPLVRNGC-GPGKKVGIVGLGG-IGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGE   86 (168)
T ss_dssp             GGTHHHHHHHHHHHTTC-STTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHH
T ss_pred             HHHHHHHHHHHHHHhCc-CCCCEEEEECCCC-cchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHH
Confidence            45754545566777665 4799999999976 5999999888999999888765321                     12


Q ss_pred             hhccCCCEEEEecCCCCc--c--cCCCcCCCcEEEEeecC
Q 017679          271 QITSEADIVIAAAGVANL--V--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ~~~~~ADIVIsAvG~p~~--I--~~e~ik~gavVIDvg~n  306 (368)
                      ......|.+|.++|.+.-  +  --+.++++-.++-+|..
T Consensus        87 ~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~  126 (168)
T d1piwa2          87 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIP  126 (168)
T ss_dssp             HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCC
T ss_pred             hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccc
Confidence            334456888877775442  2  23456777677778864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.86  E-value=0.00058  Score=60.40  Aligned_cols=57  Identities=25%  Similarity=0.287  Sum_probs=46.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------------C---HhhhccCCCEEEEecCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------N---PEQITSEADIVIAAAGVA  286 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------~---L~~~~~~ADIVIsAvG~p  286 (368)
                      |+||+++|.|++.-+|+.+|..|+++|++|.++.++.+                +   +.+...+-|++|+.+|.+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            68999999999888899999999999999999987631                1   334556778888887754

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.81  E-value=0.00078  Score=56.57  Aligned_cols=56  Identities=25%  Similarity=0.305  Sum_probs=44.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC--------------------------CCHhhhccCCCEEEEec
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT--------------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t--------------------------~~L~~~~~~ADIVIsAv  283 (368)
                      +-+||.|||+|. ||.++|.+|+..+ +++.+++.+.                          .+.++.+++|||||.++
T Consensus         6 k~~KI~IIGaG~-VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvita   84 (154)
T d1pzga1           6 RRKKVAMIGSGM-IGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA   84 (154)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred             CCCcEEEECCCH-HHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEec
Confidence            468999999966 6999999888877 5888876432                          24567789999999999


Q ss_pred             CCCC
Q 017679          284 GVAN  287 (368)
Q Consensus       284 G~p~  287 (368)
                      |.|.
T Consensus        85 g~~~   88 (154)
T d1pzga1          85 GLTK   88 (154)
T ss_dssp             SCSS
T ss_pred             cccc
Confidence            8753

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.80  E-value=0.00042  Score=58.74  Aligned_cols=75  Identities=16%  Similarity=0.181  Sum_probs=58.2

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------------------CHhhhccCCCEEEEecCCCCcc
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------NPEQITSEADIVIAAAGVANLV  289 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------------~L~~~~~~ADIVIsAvG~p~~I  289 (368)
                      -++|-+||-|.+ |.++|..|++.|.+|++++++..                      ++.+.+.++|++|..+.....+
T Consensus         2 ~~nIg~IGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v   80 (176)
T d2pgda2           2 QADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV   80 (176)
T ss_dssp             CBSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred             CCcEEEEeEhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHH
Confidence            368999999986 99999999999999999988642                      2345678889999887655421


Q ss_pred             ---c---CCCcCCCcEEEEeecCC
Q 017679          290 ---R---GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       290 ---~---~e~ik~gavVIDvg~n~  307 (368)
                         .   .+.+++|.++||.++..
T Consensus        81 ~~v~~~l~~~~~~g~iiid~sT~~  104 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGGNSE  104 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSCCC
T ss_pred             HHHHHHHHhccccCcEEEecCcch
Confidence               1   13568899999998754

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.79  E-value=0.00033  Score=58.89  Aligned_cols=95  Identities=13%  Similarity=0.120  Sum_probs=67.0

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------------------CCCHhhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------------------TKNPEQI  272 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-------------------t~~L~~~  272 (368)
                      +||.+..+...|.+..---+|++|+|.|+++.||..+++++...|++|.++.+.                   +.++.+.
T Consensus         6 l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~   85 (183)
T d1pqwa_           6 FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADE   85 (183)
T ss_dssp             HHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHH
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCccCHHHH
Confidence            466666666666555433468999999987778999999999999998877543                   2344443


Q ss_pred             c------cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          273 T------SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       273 ~------~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      +      +..|+|+.++|.+.+ ---+.++++..+|.+|..
T Consensus        86 v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~  126 (183)
T d1pqwa_          86 ILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKK  126 (183)
T ss_dssp             HHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCG
T ss_pred             HHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccC
Confidence            3      348999999986543 234577888888888854

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0006  Score=60.26  Aligned_cols=45  Identities=22%  Similarity=0.255  Sum_probs=39.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhc
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQIT  273 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~  273 (368)
                      +|+||.++|.|++.-+|+.+|..|+++|++|.++.++...+++..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~   46 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA   46 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence            589999999999998899999999999999999998876665443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.00047  Score=57.85  Aligned_cols=93  Identities=11%  Similarity=-0.004  Sum_probs=62.7

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI  272 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~  272 (368)
                      +||.+.-+...|.+..---.|++|+|.|+++.||..+++++...||+|+++.+..                   .++.+.
T Consensus         9 ~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~   88 (179)
T d1qora2           9 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVER   88 (179)
T ss_dssp             HHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHH
Confidence            4777777777776554334599999999999889999999999999998885542                   333332


Q ss_pred             c------cCCCEEEEecCCCCc-ccCCCcCCCcEEEEee
Q 017679          273 T------SEADIVIAAAGVANL-VRGSWLKPGAVVLDVG  304 (368)
Q Consensus       273 ~------~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg  304 (368)
                      +      +..|+|+.++|.+.+ -..+.++++-.++-+|
T Consensus        89 v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g  127 (179)
T d1qora2          89 LKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG  127 (179)
T ss_dssp             HHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECC
T ss_pred             HHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecc
Confidence            2      235777777775543 2334556654444444

>d1nvta2 c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.75  E-value=0.00035  Score=55.82  Aligned_cols=87  Identities=17%  Similarity=0.204  Sum_probs=57.1

Q ss_pred             CCEEEEEEeCCCc-ccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679          104 VPGLAVILVGERR-DSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL  182 (368)
Q Consensus       104 ~P~LaiI~vG~d~-aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il  182 (368)
                      +.++ .=++|+.- .|.+- .++++.+++.|+++.|..+.  ++++++.+.++.+.+ .++.|++|++|+++  +.-.++
T Consensus        10 ~tk~-~gliG~pi~~S~SP-~ihn~~~~~~gi~~~y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~~~~~~   82 (110)
T d1nvta2          10 KTKV-IGLIGHPVEHSFSP-IMHNAAFKDKGLNYVYVAFD--VLPENLKYVIDGAKA-LGIVGFNVTIPHKI--EIMKYL   82 (110)
T ss_dssp             TCEE-EEEEESSCTTCSHH-HHHHHHHHHTTCCEEEEEEE--CCGGGGGGHHHHHHH-HTCCEEEECTTSTT--GGGGGC
T ss_pred             CccE-EEEEcCCcccccCH-HHHHHHHHHcCCcEEEeecc--cCHHHHHHHHHhhcc-cCcchhheehHHHH--HHHHHh
Confidence            3455 22346442 34444 37789999999999999884  456677777777765 47999999999993  223444


Q ss_pred             hcCCcccccCccCccee
Q 017679          183 DAVSLEKDVDGFHPLNI  199 (368)
Q Consensus       183 ~~I~p~KDVDgl~~~N~  199 (368)
                      +.+++  ++.-+..+|.
T Consensus        83 d~~s~--~a~~igavNt   97 (110)
T d1nvta2          83 DEIDK--DAQLIGAVNT   97 (110)
T ss_dssp             SEECH--HHHHHTCCCE
T ss_pred             ccCCH--HHHHhCcEEE
Confidence            55555  3333445554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.75  E-value=0.00064  Score=56.52  Aligned_cols=73  Identities=18%  Similarity=0.203  Sum_probs=53.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCCC----------------CH-hhhccCCCEEEEecCCCC---ccc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK----------------NP-EQITSEADIVIAAAGVAN---LVR  290 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t~----------------~L-~~~~~~ADIVIsAvG~p~---~I~  290 (368)
                      |++.|||.|.+ |..+|..|.+.|.  +|+.+.++..                +. .....++|+||.|+....   .+.
T Consensus         2 k~I~IIG~G~m-G~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~vl~   80 (171)
T d2g5ca2           2 QNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK   80 (171)
T ss_dssp             CEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH
T ss_pred             CEEEEEccCHH-HHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCchhhhhhhh
Confidence            68999999876 9999999999884  7887776531                11 223457999999997432   221


Q ss_pred             --CCCcCCCcEEEEeecC
Q 017679          291 --GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       291 --~e~ik~gavVIDvg~n  306 (368)
                        .+.++++.+|+|++..
T Consensus        81 ~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          81 KLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHSCTTCEEEECCSC
T ss_pred             hhhccccccccccccccc
Confidence              2457889999999964

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.69  E-value=0.00073  Score=56.97  Aligned_cols=93  Identities=15%  Similarity=0.171  Sum_probs=62.2

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH------------------h--h
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP------------------E--Q  271 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L------------------~--~  271 (368)
                      +||...-+...|++.++ -.|++|+|.|+++.||..+.+++...|++|+.+.+....+                  .  .
T Consensus         9 l~~~~~TA~~al~~~~~-~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~   87 (171)
T d1iz0a2           9 FPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAK   87 (171)
T ss_dssp             SHHHHHHHHHHHHHTTC-CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeehhhhhhhhh
Confidence            46655556666776543 4799999999877789999999999999988776543111                  1  1


Q ss_pred             hccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679          272 ITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n  306 (368)
                      .-+.+|+||.++|. .+ -.-++++++-.++.+|..
T Consensus        88 ~~~g~D~v~d~~G~-~~~~~~~~l~~~G~~v~~G~~  122 (171)
T d1iz0a2          88 AWGGLDLVLEVRGK-EVEESLGLLAHGGRLVYIGAA  122 (171)
T ss_dssp             HTTSEEEEEECSCT-THHHHHTTEEEEEEEEEC---
T ss_pred             ccccccccccccch-hHHHHHHHHhcCCcEEEEeCC
Confidence            22457888887773 22 123567887777788753

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.68  E-value=0.00059  Score=61.25  Aligned_cols=42  Identities=17%  Similarity=0.299  Sum_probs=37.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP  269 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L  269 (368)
                      .+|+||.++|.|+|.-+|+.+|..|+++||+|.++.++..++
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~   46 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA   46 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            478999999999998889999999999999999999876443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.0011  Score=54.32  Aligned_cols=70  Identities=16%  Similarity=0.159  Sum_probs=53.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecCCCCc---c
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGVANL---V  289 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~p~~---I  289 (368)
                      ||+|||+|.+ |..++..|++.|.+|+++.|...                     +..+.+..+|+||.++..+..   +
T Consensus         2 kI~IiGaG~i-G~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~~~~~   80 (167)
T d1ks9a2           2 KITVLGCGAL-GQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAV   80 (167)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHH
T ss_pred             EEEEECcCHH-HHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccchHHHH
Confidence            7999999765 99999999999999999977531                     234667899999999987553   1


Q ss_pred             c--CCCcCCCcEEEEee
Q 017679          290 R--GSWLKPGAVVLDVG  304 (368)
Q Consensus       290 ~--~e~ik~gavVIDvg  304 (368)
                      .  ..++.++.+|+.+.
T Consensus        81 ~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          81 KSLASTLPVTTPILLIH   97 (167)
T ss_dssp             HHHHTTSCTTSCEEEEC
T ss_pred             HhhccccCcccEEeecc
Confidence            1  24667788787763

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.66  E-value=0.00043  Score=62.43  Aligned_cols=39  Identities=23%  Similarity=0.163  Sum_probs=35.9

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+||+|+|.|+++-+|+.+|..|+++|++|.++.++.
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~   40 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE   40 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            578999999999988889999999999999999998763

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.65  E-value=0.0012  Score=59.19  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=34.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+|+||.|+|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~   38 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR   38 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            36899999999999878999999999999998888654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.60  E-value=0.00073  Score=55.81  Aligned_cols=95  Identities=15%  Similarity=0.133  Sum_probs=67.2

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CC---
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KN---  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~---  268 (368)
                      -+||+...++..|+..++. .|.+|+|.|+|. +|...+.++...|+.|+++.+..                   .+   
T Consensus         8 ~l~~~~~Ta~~al~~~~~~-~g~~vlv~G~G~-iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~   85 (168)
T d1rjwa2           8 PIFCAGVTTYKALKVTGAK-PGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAK   85 (168)
T ss_dssp             GGGTHHHHHHHHHHHHTCC-TTCEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHH
T ss_pred             HHHHHHHHHHHHHHHhCCC-CCCEEEEeeccc-chhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhh
Confidence            4588877778888888765 589999999877 59999999999999988886542                   12   


Q ss_pred             -HhhhccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecCC
Q 017679          269 -PEQITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       269 -L~~~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n~  307 (368)
                       +.+.....|.+|..+|.+..+  .-+.++++..++-+|.+.
T Consensus        86 ~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~  127 (168)
T d1rjwa2          86 FMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPP  127 (168)
T ss_dssp             HHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred             hcccccCCCceEEeecCCHHHHHHHHHHhccCCceEeccccc
Confidence             233445566666666655443  234567887777788653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.55  E-value=0.0022  Score=53.22  Aligned_cols=55  Identities=25%  Similarity=0.403  Sum_probs=42.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCC-----------------------CCCHhhhccCCCEEEEecCCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHAL-----------------------TKNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~-----------------------t~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .||+|||++|.||..+|.+|..++.  ++.++...                       +.+.++.+++|||||.+.|.|.
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCC
Confidence            3799999855679999999998884  67777543                       1355678999999999988653

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.55  E-value=0.00056  Score=61.61  Aligned_cols=38  Identities=24%  Similarity=0.144  Sum_probs=35.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+|+||.++|.|+|.-+|+.+|..|+++||+|.++.++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   41 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN   41 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            47999999999998888999999999999999999876

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.54  E-value=0.0019  Score=55.82  Aligned_cols=53  Identities=17%  Similarity=0.181  Sum_probs=44.5

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------------------CCCHhhhccCCCEE
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------------TKNPEQITSEADIV  279 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------------------t~~L~~~~~~ADIV  279 (368)
                      +|.|||.|- ||.|+|..|+++|.+|+.....                                  +.++.+.+++||++
T Consensus         2 kI~ViGlG~-vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~i   80 (202)
T d1mv8a2           2 RISIFGLGY-VGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS   80 (202)
T ss_dssp             EEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred             EEEEECCCH-hHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCEE
Confidence            689999987 5999999999999999988642                                  13566778999999


Q ss_pred             EEecCCCC
Q 017679          280 IAAAGVAN  287 (368)
Q Consensus       280 IsAvG~p~  287 (368)
                      +.+++.|.
T Consensus        81 ~i~VpTP~   88 (202)
T d1mv8a2          81 FICVGTPS   88 (202)
T ss_dssp             EECCCCCB
T ss_pred             EEecCccc
Confidence            99999873

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.53  E-value=0.0012  Score=54.78  Aligned_cols=94  Identities=15%  Similarity=0.096  Sum_probs=62.8

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHh-
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPE-  270 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~-  270 (368)
                      .+||+..-++..+++.++ -.|.+|+|+|.|. ||..+++++...|++|+++.++..                   +.. 
T Consensus         8 ~l~ca~~Ta~~al~~~~~-~~g~~VlV~GaG~-vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~   85 (166)
T d1llua2           8 PILCAGVTVYKGLKQTNA-RPGQWVAISGIGG-LGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVE   85 (166)
T ss_dssp             GGGTHHHHHHHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHH
T ss_pred             HHHHHHHHHHHHHHHhCC-CCCCEEEEeeccc-cHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccchhHHH
Confidence            468876666777776654 3599999999876 599999999999999998876531                   221 


Q ss_pred             ---hhccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          271 ---QITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ---~~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                         +.....|.+|..+|.+..+  .-+.++++-.++-+|..
T Consensus        86 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~  126 (166)
T d1llua2          86 AIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLP  126 (166)
T ss_dssp             HHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCC
T ss_pred             HHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEec
Confidence               2223345555555554433  23567777666667754

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0005  Score=57.77  Aligned_cols=94  Identities=24%  Similarity=0.191  Sum_probs=63.8

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhh
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI  272 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~  272 (368)
                      +||...-....|.+..---.|.+|+|.|+++.||..+.+++...|++|+++.+..                   .++.+.
T Consensus         9 l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~   88 (174)
T d1yb5a2           9 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDK   88 (174)
T ss_dssp             THHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccccccccccHHHH
Confidence            4676666666665443333799999999877789999999999999988775431                   233332


Q ss_pred             c------cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeec
Q 017679          273 T------SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGT  305 (368)
Q Consensus       273 ~------~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~  305 (368)
                      +      +..|+|+.++|.+.+- .-+.++++-.++.+|.
T Consensus        89 i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~  128 (174)
T d1yb5a2          89 IKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGS  128 (174)
T ss_dssp             HHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCC
T ss_pred             hhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEec
Confidence            2      2368888888864331 2356788777777874

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.52  E-value=0.00068  Score=61.11  Aligned_cols=37  Identities=19%  Similarity=0.305  Sum_probs=34.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +|+||.++|.|+|.-+|+.+|..|+++||+|.++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~   38 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL   38 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            6899999999999888999999999999999999876

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.52  E-value=0.001  Score=56.81  Aligned_cols=94  Identities=18%  Similarity=0.144  Sum_probs=63.7

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEE-ccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhh------------------
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVI-GRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI------------------  272 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVI-G~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~------------------  272 (368)
                      +||++.-....|.+..---.|.+|+|+ |+++.||..+.++....|++|+.+-+.....++.                  
T Consensus         9 l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~   88 (189)
T d1gu7a2           9 ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQN   88 (189)
T ss_dssp             CTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEecccc
Confidence            588888888888776544568899998 5666679999999999999988776554322110                  


Q ss_pred             ----------------ccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeec
Q 017679          273 ----------------TSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       273 ----------------~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~  305 (368)
                                      -..+|+|+.++|.+.+ -.-+.++++-.++.+|.
T Consensus        89 ~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~  138 (189)
T d1gu7a2          89 NSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGG  138 (189)
T ss_dssp             HCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCC
T ss_pred             chhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECC
Confidence                            0236777777775543 12345677777777763

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.50  E-value=0.0016  Score=58.49  Aligned_cols=38  Identities=24%  Similarity=0.403  Sum_probs=34.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+||.++|.|+|.-+|+.+|..|+++||+|.+++++.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~   39 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR   39 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            47999999999988889999999999999999998763

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.49  E-value=0.0013  Score=58.51  Aligned_cols=38  Identities=16%  Similarity=0.219  Sum_probs=34.6

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+||.++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~   39 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE   39 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            47999999999888789999999999999999998863

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.49  E-value=0.0017  Score=53.95  Aligned_cols=95  Identities=15%  Similarity=0.130  Sum_probs=67.9

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPE  270 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~  270 (368)
                      .+||........+++.++ -.|.+|+|+|.++.+|..+++++...|+ +|+++.++.                   .+..
T Consensus         8 ~l~c~~~Ta~~al~~~~~-~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~   86 (170)
T d1jvba2           8 PLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPL   86 (170)
T ss_dssp             GGGTHHHHHHHHHHHTTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHH
T ss_pred             HHHHHHHHHHHHHHHhCC-CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHH
Confidence            468876666677777654 4688999999866679999999988885 888886542                   2222


Q ss_pred             hhc------cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679          271 QIT------SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ~~~------~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n  306 (368)
                      +.+      ...|++|.++|.+..+.  -+++++|-.++=+|..
T Consensus        87 ~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~  130 (170)
T d1jvba2          87 AEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF  130 (170)
T ss_dssp             HHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSS
T ss_pred             HHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccc
Confidence            222      34789999888776543  3578888888888865

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.47  E-value=0.00062  Score=61.65  Aligned_cols=39  Identities=23%  Similarity=0.204  Sum_probs=35.7

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+||.++|.|+++-+|+.+|..|+++|++|+++.++.
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~   59 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM   59 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence            368999999999888889999999999999999998874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=96.46  E-value=0.0021  Score=57.49  Aligned_cols=37  Identities=22%  Similarity=0.310  Sum_probs=34.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |+||.++|.|+|.-+|+.+|..|+++|++|.++.++.
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~   39 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP   39 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            7999999999888889999999999999999998764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00096  Score=59.49  Aligned_cols=37  Identities=19%  Similarity=0.239  Sum_probs=35.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |+||.++|.|+|.-+|+.+|..|+++|++|.+++++.
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~   40 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE   40 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            8999999999999999999999999999999999874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.42  E-value=0.00074  Score=60.56  Aligned_cols=38  Identities=21%  Similarity=0.271  Sum_probs=35.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++|+||.++|.|++.-+|+.+|..|+++||+|.++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~   38 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN   38 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999998888999999999999999999876

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.0017  Score=58.15  Aligned_cols=39  Identities=23%  Similarity=0.175  Sum_probs=35.4

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      -.|+||.++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~   40 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE   40 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            468999999999988889999999999999999998763

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0022  Score=55.91  Aligned_cols=56  Identities=13%  Similarity=0.160  Sum_probs=47.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC---------------------CCHhhhccCCCEEEEecCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT---------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      .++|+|+|.|++|.+|+.++..|+++|.  +|++..|+.                     .++.+.++.+|++|.++|.
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~   90 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   90 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence            5789999999999999999999999885  899988753                     2355678899999998885

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.40  E-value=0.0023  Score=59.55  Aligned_cols=76  Identities=16%  Similarity=0.250  Sum_probs=59.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC------------------CCHhhhccCCCEEEEecCCCC-cc
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT------------------KNPEQITSEADIVIAAAGVAN-LV  289 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t------------------~~L~~~~~~ADIVIsAvG~p~-~I  289 (368)
                      .-+++.|||+|.- ++.-+..|.. .. .+|.+.+++.                  .+..+.++.|||||++|.+.. ++
T Consensus       124 ~~~~l~iiGaG~Q-A~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~s~~P~~  202 (320)
T d1omoa_         124 NSSVFGFIGCGTQ-AYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKPVV  202 (320)
T ss_dssp             TCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCCSSCCB
T ss_pred             CccEEEEecCccc-HHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEeccCccccc
Confidence            4578999998875 8887777664 34 4899888763                  134577899999999999766 47


Q ss_pred             cCCCcCCCcEEEEeecCC
Q 017679          290 RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       290 ~~e~ik~gavVIDvg~n~  307 (368)
                      +.+|+++|+.|.=+|.+.
T Consensus       203 ~~~~l~~G~hv~~iGs~~  220 (320)
T d1omoa_         203 KAEWVEEGTHINAIGADG  220 (320)
T ss_dssp             CGGGCCTTCEEEECSCCS
T ss_pred             chhhcCCCCeEeecCCcc
Confidence            999999999999999753

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.38  E-value=0.0016  Score=52.02  Aligned_cols=53  Identities=26%  Similarity=0.184  Sum_probs=41.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------C-Hhh-hccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------N-PEQ-ITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~-L~~-~~~~ADIVIsAvG~p  286 (368)
                      |+++|+|.|.+ |+.++..|.++|..|+++.....                    + |.+ .+.+||.||.+++..
T Consensus         1 k~~iIiG~G~~-G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           1 KQFAVIGLGRF-GGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CCEEEECCSHH-HHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSC
T ss_pred             CEEEEECCCHH-HHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCch
Confidence            78999999875 99999999999999999976521                    1 222 267788888777753

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.38  E-value=0.0018  Score=53.60  Aligned_cols=111  Identities=16%  Similarity=0.145  Sum_probs=69.1

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC---CEEEEEeCCCC---------------C-HhhhccCCCEEEEecCCCC--cccC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALTK---------------N-PEQITSEADIVIAAAGVAN--LVRG  291 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g---AtVti~h~~t~---------------~-L~~~~~~ADIVIsAvG~p~--~I~~  291 (368)
                      -+|.|||++|.||+-+..+|.+++   .++..+.+++.               + -.+...++|+++.+++...  .+.+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~~~~~d~vf~a~p~~~s~~~~~   82 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAAEVSRAHAE   82 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSCHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhhhccceEEEecCCcchhhhhcc
Confidence            379999999999999999997553   46666544421               1 1244678999999986422  2344


Q ss_pred             CCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhh--ccceEeccCCCcccHHHHHHHH
Q 017679          292 SWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAM--RLASVITPVPGGVGPMTVAMLL  354 (368)
Q Consensus       292 e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~--~~a~~iTPVPGGVGp~T~amLl  354 (368)
                      ...+.|..|||.+..+..   ++    .-.++-.+.-+...  +++..| ..||=   .|+.+|+
T Consensus        83 ~~~~~g~~VID~Ss~fR~---~~----~~~~vpevn~~~l~~~~~~~iI-ANPgC---~t~~~ll  136 (144)
T d2hjsa1          83 RARAAGCSVIDLSGALEP---SV----APPVMVSVNAERLASQAAPFLL-SSPAA---LNAVLLG  136 (144)
T ss_dssp             HHHHTTCEEEETTCTTTT---TT----SCBCCHHHHGGGGGGSCSSCEE-ECCCH---HHHHHHH
T ss_pred             ccccCCceEEeechhhcc---cc----cccccccccHHHHHhccCCCEE-ccCcH---HHHHHHH
Confidence            556789999999977643   11    11234444434332  234445 56873   4455544

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.35  E-value=0.001  Score=59.10  Aligned_cols=39  Identities=23%  Similarity=0.327  Sum_probs=35.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .|+||.++|.|+|.-+|+.+|..|+++|++|.++.++.+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~   40 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREER   40 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            479999999999998899999999999999999987643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.33  E-value=0.0015  Score=54.33  Aligned_cols=55  Identities=20%  Similarity=0.342  Sum_probs=42.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCC--CEEEEEeCCC------------------------CCHhhhccCCCEEEEecC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT------------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t------------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      +.+||.|||+|. ||.++|..|+.+|  .++.++....                        .+. +.+++|||||.++|
T Consensus         4 ~~~KI~IIGaG~-VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-~~~~~adivvitag   81 (146)
T d1ez4a1           4 NHQKVVLVGDGA-VGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-SDCKDADLVVITAG   81 (146)
T ss_dssp             TBCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-GGGTTCSEEEECCC
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-HHhccccEEEEecc
Confidence            467999999876 6999999999887  4899987542                        132 56799999999998


Q ss_pred             CCC
Q 017679          285 VAN  287 (368)
Q Consensus       285 ~p~  287 (368)
                      .|.
T Consensus        82 ~~~   84 (146)
T d1ez4a1          82 APQ   84 (146)
T ss_dssp             C--
T ss_pred             ccc
Confidence            764

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.33  E-value=0.0007  Score=61.01  Aligned_cols=38  Identities=13%  Similarity=0.106  Sum_probs=35.5

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~   41 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN   41 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            47899999999999888999999999999999999876

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.30  E-value=0.0017  Score=55.24  Aligned_cols=53  Identities=17%  Similarity=0.231  Sum_probs=44.5

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC-----------------------------CCCHhhhccCCCEEEEecC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-----------------------------TKNPEQITSEADIVIAAAG  284 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-----------------------------t~~L~~~~~~ADIVIsAvG  284 (368)
                      +|.|||+|.. |..+|..|.+.|.+|++..|.                             +.++.+.+++||+||.|++
T Consensus         2 kI~ViGaG~~-GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avp   80 (180)
T d1txga2           2 IVSILGAGAM-GSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS   80 (180)
T ss_dssp             EEEEESCCHH-HHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred             EEEEECCCHH-HHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcccc
Confidence            7999999876 999999999999999998642                             1356788999999999998


Q ss_pred             CCC
Q 017679          285 VAN  287 (368)
Q Consensus       285 ~p~  287 (368)
                      ...
T Consensus        81 s~~   83 (180)
T d1txga2          81 TDG   83 (180)
T ss_dssp             GGG
T ss_pred             hhh
Confidence            544

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=96.30  E-value=0.00049  Score=56.44  Aligned_cols=70  Identities=11%  Similarity=0.006  Sum_probs=45.0

Q ss_pred             EEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc--ccCCCcCCCcE
Q 017679          236 VVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL--VRGSWLKPGAV  299 (368)
Q Consensus       236 vVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~--I~~e~ik~gav  299 (368)
                      -+||.|++ |++++..|.+.+..++|++|+.              .++.+.++++|+||.++.-..+  +-.+.-+++.+
T Consensus         3 gfIG~G~m-g~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d~~i~~v~~~l~~~~~i   81 (153)
T d2i76a2           3 NFVGTGTL-TRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRYIKTVANHLNLGDAV   81 (153)
T ss_dssp             EEESCCHH-HHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTTHHHHHTTTCCSSCC
T ss_pred             EEEeCcHH-HHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccchhhhHHHhhhccccee
Confidence            47999986 9999998866443345777652              3456788999999999964332  33333357899


Q ss_pred             EEEeecC
Q 017679          300 VLDVGTC  306 (368)
Q Consensus       300 VIDvg~n  306 (368)
                      |||++..
T Consensus        82 vi~~s~~   88 (153)
T d2i76a2          82 LVHCSGF   88 (153)
T ss_dssp             EEECCSS
T ss_pred             eeecccc
Confidence            9998754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.28  E-value=0.0017  Score=57.64  Aligned_cols=37  Identities=27%  Similarity=0.477  Sum_probs=33.0

Q ss_pred             CCCccceEEEEccC---ccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g---~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++|+||.++|.|+|   ++ |+.+|..|+++||+|.++.+.
T Consensus         4 ~~L~gK~alITGas~~~GI-G~aiA~~la~~Ga~V~i~~~~   43 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSL-GFAIAAKLKEAGAEVALSYQA   43 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSH-HHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEECCCCCchH-HHHHHHHHHHCCCEEEEEeCc
Confidence            58999999999986   45 999999999999999888765

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.28  E-value=0.0023  Score=53.19  Aligned_cols=56  Identities=25%  Similarity=0.338  Sum_probs=43.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC------------------------CCHhhhccCCCEEEEecC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAAG  284 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t------------------------~~L~~~~~~ADIVIsAvG  284 (368)
                      .++||.|||+|. ||..+|+.|+.++-  ++.++..+.                        .+-.+.+++||+||.++|
T Consensus         5 ~~~KI~IiGaG~-vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag   83 (148)
T d1ldna1           5 GGARVVVIGAGF-VGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAG   83 (148)
T ss_dssp             TSCEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCS
T ss_pred             CCCeEEEECcCH-HHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEecc
Confidence            578999999976 69999999998873  788886431                        123477899999999998


Q ss_pred             CCC
Q 017679          285 VAN  287 (368)
Q Consensus       285 ~p~  287 (368)
                      .|.
T Consensus        84 ~~~   86 (148)
T d1ldna1          84 ANQ   86 (148)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            753

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.28  E-value=0.0019  Score=58.17  Aligned_cols=37  Identities=22%  Similarity=0.299  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~   40 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS   40 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            6999999999988888999999999999999999875

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.27  E-value=0.0035  Score=52.34  Aligned_cols=56  Identities=21%  Similarity=0.319  Sum_probs=43.4

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------------CCHhhhccCCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ..||.|||+|. ||..+|.+|..++. ++.++..+.                         .+..+.+++||+||.+.|.
T Consensus         3 ~~KI~IIGaG~-VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~   81 (150)
T d1t2da1           3 KAKIVLVGSGM-IGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF   81 (150)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred             CCeEEEECCCH-HHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence            46899999876 69999999988884 777776432                         1345788999999999996


Q ss_pred             CCc
Q 017679          286 ANL  288 (368)
Q Consensus       286 p~~  288 (368)
                      |..
T Consensus        82 ~~~   84 (150)
T d1t2da1          82 TKA   84 (150)
T ss_dssp             SSC
T ss_pred             ccC
Confidence            643

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.27  E-value=0.002  Score=57.81  Aligned_cols=36  Identities=19%  Similarity=0.287  Sum_probs=33.7

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      |+||.++|.|++.-+|+.+|..|+++||+|.++.++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~   37 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS   37 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            799999999998888999999999999999999875

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.00074  Score=60.80  Aligned_cols=37  Identities=24%  Similarity=0.330  Sum_probs=34.7

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |+||+++|.|+|.-+|+.+|..|+++|++|.++.|+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~   48 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK   48 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            8999999999988889999999999999999998864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.26  E-value=0.00081  Score=60.00  Aligned_cols=38  Identities=26%  Similarity=0.192  Sum_probs=35.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +|+||.++|.|+|.-+|+.+|..|+++|++|.++.++.
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~   38 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE   38 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            68999999999988889999999999999999998763

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.24  E-value=0.0027  Score=52.30  Aligned_cols=54  Identities=20%  Similarity=0.367  Sum_probs=40.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC-------------------------CCHhhhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT-------------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      +||.|||+|. ||.++|.+|+.++ +++..++...                         .+-.+.+++||+||.++|.|
T Consensus         2 ~KI~IIGaG~-VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~~   80 (142)
T d1uxja1           2 KKISIIGAGF-VGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAP   80 (142)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSCC
T ss_pred             CeEEEECCCH-HHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeecc
Confidence            6899999866 6999999998887 5877775431                         01235689999999999876


Q ss_pred             C
Q 017679          287 N  287 (368)
Q Consensus       287 ~  287 (368)
                      .
T Consensus        81 ~   81 (142)
T d1uxja1          81 R   81 (142)
T ss_dssp             -
T ss_pred             C
Confidence            3

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.23  E-value=0.003  Score=56.21  Aligned_cols=38  Identities=21%  Similarity=0.267  Sum_probs=34.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+||.++|.|+|.-+|+.+|..|+++|++|.++.++.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~   39 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP   39 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            48999999999988889999999999999999998763

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.23  E-value=0.0023  Score=57.19  Aligned_cols=36  Identities=28%  Similarity=0.298  Sum_probs=33.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      |+||.++|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~   37 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG   37 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            689999999998888999999999999999999875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.20  E-value=0.002  Score=57.82  Aligned_cols=37  Identities=19%  Similarity=0.258  Sum_probs=33.0

Q ss_pred             CCCCccceEEEEccC---ccchHHHHHHHhhCCCEEEEEeC
Q 017679          227 GVEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g---~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .++|+||+++|.|+|   ++ |+.+|..|+++||+|.++.+
T Consensus         3 ~~~L~gK~alVTGass~~GI-G~aiA~~la~~Ga~Vvi~~~   42 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGY-GWAVAKSLAAAGAEILVGTW   42 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSH-HHHHHHHHHHTTCEEEEEEE
T ss_pred             CcCCCCCEEEEECCCCCchH-HHHHHHHHHHCCCEEEEEeC
Confidence            368999999999976   55 99999999999999998865

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.19  E-value=0.0058  Score=50.47  Aligned_cols=86  Identities=20%  Similarity=0.293  Sum_probs=62.4

Q ss_pred             HHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHh---hhc--
Q 017679          220 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPE---QIT--  273 (368)
Q Consensus       220 ~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~---~~~--  273 (368)
                      ++.+++.++ -.|.+|+|+|.|. ||..+++++...|++|+++.++..                     +..   +.+  
T Consensus        16 ~~a~~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~   93 (170)
T d1e3ja2          16 VHACRRAGV-QLGTTVLVIGAGP-IGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRS   93 (170)
T ss_dssp             HHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCEEEEEcccc-cchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhc
Confidence            455666654 4688999999876 599999999999999999876421                     111   111  


Q ss_pred             ---cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecCC
Q 017679          274 ---SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       274 ---~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n~  307 (368)
                         ..+|+||-++|.+..+.  -++++++-.++=+|...
T Consensus        94 ~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~  132 (170)
T d1e3ja2          94 AIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS  132 (170)
T ss_dssp             HSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS
T ss_pred             ccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCC
Confidence               34899999999887543  36788888888888654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.19  E-value=0.0018  Score=58.06  Aligned_cols=37  Identities=32%  Similarity=0.346  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+||.++|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~   39 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN   39 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4899999999988888999999999999999999875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.18  E-value=0.0011  Score=59.23  Aligned_cols=37  Identities=24%  Similarity=0.287  Sum_probs=34.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +|+||.|+|.|++.-+|+.+|..|+++|++|+++.++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~   39 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS   39 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence            6899999999999888999999999999999987654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.18  E-value=0.0033  Score=52.29  Aligned_cols=77  Identities=21%  Similarity=0.271  Sum_probs=55.7

Q ss_pred             cceEEEEccCccchHHHHHHHhhCC---CEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCC--ccc
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN--LVR  290 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~g---AtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~--~I~  290 (368)
                      |-+|.|||++|.||.-+.++|.++.   ..+..+.++.                ........+.|+++.+++...  ..-
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~~~s~~~~   80 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYA   80 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhhhhhhhhhhccCccchhhHH
Confidence            6689999999999999999999885   3555554432                122345678899999987422  133


Q ss_pred             CCCcCCCcEEEEeecCCC
Q 017679          291 GSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       291 ~e~ik~gavVIDvg~n~~  308 (368)
                      ++..+.|..|||.+....
T Consensus        81 ~~~~~~~~~VIDlSsdfR   98 (154)
T d2gz1a1          81 PYAVKAGVVVVDNTSYFR   98 (154)
T ss_dssp             HHHHHTTCEEEECSSTTT
T ss_pred             hhhccccceehhcChhhh
Confidence            455678999999997764

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.17  E-value=0.0039  Score=51.73  Aligned_cols=54  Identities=30%  Similarity=0.455  Sum_probs=41.3

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-----------------------------CCHhhhccCCCEEEEe
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-----------------------------KNPEQITSEADIVIAA  282 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-----------------------------~~L~~~~~~ADIVIsA  282 (368)
                      ||.|||++|.||..+|.+|+.++.  ++.++....                             .+..+.+++|||||.+
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVit   81 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIIT   81 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEEe
Confidence            699999855679999999999983  788875431                             1234678899999999


Q ss_pred             cCCCC
Q 017679          283 AGVAN  287 (368)
Q Consensus       283 vG~p~  287 (368)
                      +|.|.
T Consensus        82 AG~~~   86 (145)
T d1hyea1          82 SGVPR   86 (145)
T ss_dssp             CSCCC
T ss_pred             ccccc
Confidence            98653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0078  Score=49.94  Aligned_cols=86  Identities=22%  Similarity=0.383  Sum_probs=61.8

Q ss_pred             HHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHhhhc------
Q 017679          220 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQIT------  273 (368)
Q Consensus       220 ~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~~~~------  273 (368)
                      +..+++.++ -.|.+|+|+|.|. +|..+++++...|+ +|+++.+..                   .+..+..      
T Consensus        16 ~~a~~~~~~-~~gd~VlI~G~G~-iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~   93 (171)
T d1pl8a2          16 IHACRRGGV-TLGHKVLVCGAGP-IGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ   93 (171)
T ss_dssp             HHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCEEEEECCCc-cHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccccccccccccccccccc
Confidence            345566654 3588999999876 59999999999999 788886542                   1222111      


Q ss_pred             --cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecCC
Q 017679          274 --SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       274 --~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n~  307 (368)
                        ..+|+||-++|.+..+.  -+++++|-.++=+|...
T Consensus        94 ~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~  131 (171)
T d1pl8a2          94 LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS  131 (171)
T ss_dssp             HTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC
T ss_pred             CCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCC
Confidence              35899999999887653  46788887777788654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=96.16  E-value=0.0019  Score=54.55  Aligned_cols=33  Identities=30%  Similarity=0.401  Sum_probs=30.7

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ||||+|||+|-+ |..+|..|++.|.+|+|+.+.
T Consensus         1 ~KkV~IIGaG~a-GL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVS-GLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence            799999999987 999999999999999999764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.15  E-value=0.005  Score=55.08  Aligned_cols=79  Identities=16%  Similarity=0.152  Sum_probs=56.3

Q ss_pred             cCCHHHHHHHHH----Hh--CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------CH-hh
Q 017679          213 PCTPKGCIELLI----RS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NP-EQ  271 (368)
Q Consensus       213 PcTa~gv~~lL~----~~--~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------~L-~~  271 (368)
                      +.|++|+...++    +.  ..+|+||+|+|-|.|++ |..+|.+|.+.||+|+++..+..              +. +-
T Consensus        14 ~aTg~GV~~~~~~~~~~~~g~~~l~g~~v~IqG~GnV-G~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~   92 (230)
T d1leha1          14 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNV-AKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAI   92 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGT
T ss_pred             cchHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCccc
Confidence            678888777654    33  45799999999999985 99999999999999998865421              11 22


Q ss_pred             hccCCCEEEEecCCCCcccCCC
Q 017679          272 ITSEADIVIAAAGVANLVRGSW  293 (368)
Q Consensus       272 ~~~~ADIVIsAvG~p~~I~~e~  293 (368)
                      ...++||++=|.. .+.|+.+.
T Consensus        93 ~~~~cDIl~PcA~-~~~I~~~~  113 (230)
T d1leha1          93 YGVTCDIFAPCAL-GAVLNDFT  113 (230)
T ss_dssp             TTCCCSEEEECSC-SCCBSTTH
T ss_pred             ccccccEeccccc-ccccChHH
Confidence            3567899884432 33455443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.12  E-value=0.0044  Score=50.76  Aligned_cols=53  Identities=30%  Similarity=0.455  Sum_probs=41.7

Q ss_pred             eEEEEccCccchHHHHHHHhhCC--CEEEEEeCCC-------------------------CCHhhhccCCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT-------------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      ||.|||+|. ||.+++..|+..+  -++.++..+.                         .+..+.+++||+||.++|.|
T Consensus         2 KI~IIGaG~-VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag~~   80 (142)
T d1guza1           2 KITVIGAGN-VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP   80 (142)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred             EEEEECcCH-HHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEecC
Confidence            699999876 6999999999888  3788887542                         13357789999999998865


Q ss_pred             C
Q 017679          287 N  287 (368)
Q Consensus       287 ~  287 (368)
                      .
T Consensus        81 ~   81 (142)
T d1guza1          81 R   81 (142)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.002  Score=53.73  Aligned_cols=76  Identities=14%  Similarity=0.155  Sum_probs=51.6

Q ss_pred             ceEEEEccCccchHHHHHHHhhC-C---CEEEEEeCCCC---------------CH--hhhccCCCEEEEecCCC--Ccc
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH-H---ATVSIVHALTK---------------NP--EQITSEADIVIAAAGVA--NLV  289 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~-g---AtVti~h~~t~---------------~L--~~~~~~ADIVIsAvG~p--~~I  289 (368)
                      |+|.|||++|.||+-+..+|+++ +   .+++...+...               ++  .+..++.|++|.|+|..  ..+
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~DivF~a~~~~~s~~~   81 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEI   81 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTCSEEEECSCHHHHHHH
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcCcEEEEecCchHHHHh
Confidence            68999999999999988755544 2   46776655421               11  13468999999999742  223


Q ss_pred             cCCCcCCC--cEEEEeecCCC
Q 017679          290 RGSWLKPG--AVVLDVGTCPV  308 (368)
Q Consensus       290 ~~e~ik~g--avVIDvg~n~~  308 (368)
                      -+...+.|  .+|||.+....
T Consensus        82 ~~~~~~~g~~~~VID~Ss~fR  102 (146)
T d1t4ba1          82 YPKLRESGWQGYWIDAASSLR  102 (146)
T ss_dssp             HHHHHHTTCCCEEEECSSTTT
T ss_pred             hHHHHhcCCCeecccCCcccc
Confidence            34445555  68999987654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.07  E-value=0.0014  Score=59.42  Aligned_cols=38  Identities=13%  Similarity=0.220  Sum_probs=34.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+||.++|.|+|.-+|+.+|..|+++||+|.++.++.
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~   39 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA   39 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            47999999999988889999999999999999998863

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=96.05  E-value=0.0072  Score=56.92  Aligned_cols=76  Identities=13%  Similarity=0.177  Sum_probs=58.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      .-+++.|||.|.- ++.-+..+.. .+ .+|.+..++.                     .++++.++.||||+++|..+.
T Consensus       127 da~~l~iiG~G~Q-A~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s  205 (340)
T d1x7da_         127 NARKMALIGNGAQ-SEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA  205 (340)
T ss_dssp             TCCEEEEECCSTT-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred             CCceEEEEcccHH-HHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCC
Confidence            4578999998875 7766655543 44 4788887652                     467899999999999887543


Q ss_pred             ---cccCCCcCCCcEEEEeecCC
Q 017679          288 ---LVRGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       288 ---~I~~e~ik~gavVIDvg~n~  307 (368)
                         +++.+|++||+.|.=+|.+.
T Consensus       206 ~~Pv~~~~~l~pG~hI~aiGs~~  228 (340)
T d1x7da_         206 YATIITPDMLEPGMHLNAVGGDC  228 (340)
T ss_dssp             EEEEECGGGCCTTCEEEECSCCB
T ss_pred             CCcccchhhcCCCCEEeecccch
Confidence               68999999999999998753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.04  E-value=0.0031  Score=52.38  Aligned_cols=54  Identities=24%  Similarity=0.266  Sum_probs=41.1

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC------------------------CCHhhhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t------------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      |||.|||+|. ||..+|..|+.+|.  ++.++....                        .+-.+.+++||+||.++|.|
T Consensus         2 kKI~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~~   80 (146)
T d1hyha1           2 RKIGIIGLGN-VGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNI   80 (146)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCG
T ss_pred             CeEEEECcCH-HHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEecccc
Confidence            7999999876 69999999888773  777776431                        01236689999999988865


Q ss_pred             C
Q 017679          287 N  287 (368)
Q Consensus       287 ~  287 (368)
                      .
T Consensus        81 ~   81 (146)
T d1hyha1          81 K   81 (146)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.03  E-value=0.0033  Score=53.72  Aligned_cols=53  Identities=21%  Similarity=0.144  Sum_probs=42.1

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      ||+-+++-|.+.+..-+|.+|+|-|+++-||..+.+++...|++|+.+.+...
T Consensus        15 TA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~   67 (176)
T d1xa0a2          15 TAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA   67 (176)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             HHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchH
Confidence            44444455666777778999999999999999999999999999888776543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.03  E-value=0.0012  Score=59.14  Aligned_cols=37  Identities=24%  Similarity=0.297  Sum_probs=34.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+||.++|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~   38 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADIN   38 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3799999999998888999999999999999999876

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.02  E-value=0.0012  Score=59.30  Aligned_cols=38  Identities=18%  Similarity=0.292  Sum_probs=35.1

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..|+||.++|.|+|.-+|+.+|..|+++||+|.++.++
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   44 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN   44 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            46899999999998888999999999999999999876

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.02  E-value=0.0015  Score=58.72  Aligned_cols=38  Identities=26%  Similarity=0.288  Sum_probs=34.6

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~   51 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN   51 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            45899999999988888999999999999999998765

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.01  E-value=0.002  Score=54.10  Aligned_cols=95  Identities=17%  Similarity=0.148  Sum_probs=64.1

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC-------------------CCCHh
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL-------------------TKNPE  270 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~-------------------t~~L~  270 (368)
                      .++|........+.+..---.|.+|+|+|.|. +|...++++...|+ .|+++.++                   .++..
T Consensus         8 pl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~-iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~   86 (174)
T d1f8fa2           8 PLGCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPV   86 (174)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEESCSH-HHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHH
T ss_pred             HHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCH-HHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHH
Confidence            45786555555544444345699999999976 59999999988888 45555432                   23344


Q ss_pred             hhcc-----CCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679          271 QITS-----EADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC  306 (368)
Q Consensus       271 ~~~~-----~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n  306 (368)
                      +.++     .+|+||-++|.+..+  .-+.++++-.++=+|..
T Consensus        87 ~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~  129 (174)
T d1f8fa2          87 AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAP  129 (174)
T ss_dssp             HHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCC
T ss_pred             HHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeec
Confidence            4332     279999999987654  34667887777777754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.01  E-value=0.0026  Score=53.60  Aligned_cols=94  Identities=15%  Similarity=-0.008  Sum_probs=63.5

Q ss_pred             ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHh--
Q 017679          212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE--  270 (368)
Q Consensus       212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~--  270 (368)
                      ++|+..-....|.+..---+|.+|+|.|+++.||..++++....||+|+...+..                   .+..  
T Consensus        10 lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~   89 (182)
T d1v3va2          10 IGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEE   89 (182)
T ss_dssp             TSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHH
T ss_pred             HhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHH
Confidence            3555555556665554334699999999999999999999999999988776542                   1111  


Q ss_pred             --hhc--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeec
Q 017679          271 --QIT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT  305 (368)
Q Consensus       271 --~~~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~  305 (368)
                        +.+  ...|+|+.++|.+.+ -.-+.++++..++-+|.
T Consensus        90 ~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~  129 (182)
T d1v3va2          90 ALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGA  129 (182)
T ss_dssp             HHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCC
T ss_pred             HHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecc
Confidence              111  347888888875433 23456777777777773

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.98  E-value=0.0029  Score=53.47  Aligned_cols=53  Identities=17%  Similarity=0.130  Sum_probs=45.0

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      |+...+..|.+.+...+|..|+|-|+++-||..+.++....||+|+...+...
T Consensus         7 TA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~   59 (167)
T d1tt7a2           7 TAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE   59 (167)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHH
Confidence            56666777888888888989999999888999999999999999888877654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.0037  Score=53.61  Aligned_cols=36  Identities=22%  Similarity=0.305  Sum_probs=32.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..++|+|+|||+|-+ |...|..|.++|.+|+++.+.
T Consensus        40 ~~~~k~V~IIGaGPA-GL~AA~~la~~G~~Vtl~E~~   75 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPA-GLAFAINAAARGHQVTLFDAH   75 (179)
T ss_dssp             CSSCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCcEEEEECccHH-HHHHHHHHHhhccceEEEecc
Confidence            357899999999987 999999999999999999875

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0054  Score=52.78  Aligned_cols=32  Identities=25%  Similarity=0.287  Sum_probs=28.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      |+|.|||+|-+ |..+|.++++.|.+|+++.+.
T Consensus         5 kkvaViGaG~m-G~~iA~~~a~~G~~V~l~D~~   36 (192)
T d1f0ya2           5 KHVTVIGGGLM-GAGIAQVAAATGHTVVLVDQT   36 (192)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSC
T ss_pred             EEEEEECcCHH-HHHHHHHHHhCCCcEEEEECC
Confidence            79999999775 999999999999999999654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=95.94  E-value=0.0017  Score=58.44  Aligned_cols=37  Identities=27%  Similarity=0.320  Sum_probs=34.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+||.|+|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~   39 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA   39 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            4899999999998888999999999999999999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0018  Score=57.94  Aligned_cols=38  Identities=11%  Similarity=0.206  Sum_probs=35.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +|.||.++|.|+|.-+|+.+|..|+++|++|.++.++.
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~   41 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK   41 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            58999999999999889999999999999999999874

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.90  E-value=0.0047  Score=54.75  Aligned_cols=37  Identities=16%  Similarity=0.230  Sum_probs=32.4

Q ss_pred             CccceEEEEccCc--cchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~--~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |+||+++|.|+++  =+|+.+|..|+++|++|+++.++.
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~   41 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE   41 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            7999999999653  249999999999999999999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.87  E-value=0.0019  Score=57.79  Aligned_cols=38  Identities=24%  Similarity=0.239  Sum_probs=34.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+||.++|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~   40 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD   40 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            48999999999988889999999999999999998763

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=95.85  E-value=0.0074  Score=50.95  Aligned_cols=57  Identities=21%  Similarity=0.424  Sum_probs=44.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC------------------------CCHhhhccCCCEEEEec
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t------------------------~~L~~~~~~ADIVIsAv  283 (368)
                      +..+||.|||+|. ||..+|..|..+|.  ++.++..+.                        ..-.+.+++|||||.++
T Consensus        18 ~~~~KV~IIGaG~-VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVitA   96 (160)
T d1i0za1          18 VPNNKITVVGVGQ-VGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTA   96 (160)
T ss_dssp             CCSSEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEECC
T ss_pred             CCCCeEEEECCCH-HHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEec
Confidence            5678999999976 69999999999984  788886541                        12246789999999999


Q ss_pred             CCCC
Q 017679          284 GVAN  287 (368)
Q Consensus       284 G~p~  287 (368)
                      |.|.
T Consensus        97 g~~~  100 (160)
T d1i0za1          97 GVRQ  100 (160)
T ss_dssp             SCCC
T ss_pred             CCcc
Confidence            8764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0018  Score=58.00  Aligned_cols=38  Identities=18%  Similarity=0.109  Sum_probs=34.9

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+||.|+|.|+|.-+|+.+|..|+++|++|.++.++.
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~   44 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV   44 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            38999999999999999999999999999999998763

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.84  E-value=0.0015  Score=58.90  Aligned_cols=37  Identities=27%  Similarity=0.413  Sum_probs=34.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~   38 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS   38 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            3799999999998888999999999999999999875

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.83  E-value=0.0015  Score=58.46  Aligned_cols=40  Identities=18%  Similarity=0.076  Sum_probs=36.0

Q ss_pred             hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      |-..|+||.++|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~   43 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT   43 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC
Confidence            3467899999999998888999999999999999999876

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.77  E-value=0.0075  Score=49.66  Aligned_cols=53  Identities=13%  Similarity=0.347  Sum_probs=39.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-----------------------CCHhhhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-----------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-----------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      +||+|||+|. ||..+|..|+.++-  ++.++....                       ....+.+++|||||.+.|.+
T Consensus         2 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~   79 (142)
T d1y6ja1           2 SKVAIIGAGF-VGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN   79 (142)
T ss_dssp             CCEEEECCSH-HHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred             CeEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEecccc
Confidence            5799999966 59999999998874  788886432                       12246688899999888865

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0021  Score=58.96  Aligned_cols=37  Identities=22%  Similarity=0.200  Sum_probs=34.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+||.++|.|++.-+|+.+|..|+++||+|.++.++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~   45 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK   45 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3899999999998888999999999999999999876

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.73  E-value=0.0018  Score=58.08  Aligned_cols=37  Identities=32%  Similarity=0.424  Sum_probs=34.3

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~   38 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH   38 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4799999999998888999999999999999999876

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.72  E-value=0.011  Score=50.14  Aligned_cols=67  Identities=27%  Similarity=0.262  Sum_probs=49.2

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhh-ccCCCEEEE
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI-TSEADIVIA  281 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~-~~~ADIVIs  281 (368)
                      |++-.+.-|++.+...++.+|+|.|+++-||....+++...||+|+.+.+..+..+.. ---||.+|.
T Consensus        15 TA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi~   82 (177)
T d1o89a2          15 TAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLP   82 (177)
T ss_dssp             HHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEEE
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccccc
Confidence            5555556677888888888999999999999999999999999988777665432211 123565554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.68  E-value=0.005  Score=56.57  Aligned_cols=37  Identities=19%  Similarity=0.252  Sum_probs=33.8

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ..|+||.++|.|+|.-+|+.+|..|+++||+|.++.+
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~   39 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDL   39 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence            4689999999999998999999999999999999854

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.67  E-value=0.0076  Score=49.80  Aligned_cols=54  Identities=20%  Similarity=0.334  Sum_probs=41.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC------------------------CCHhhhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t------------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      .||.|||+|. ||..+|..|..++.  ++.++..+.                        .+-.+.+++||+||.++|.|
T Consensus         2 ~Ki~IIGaG~-VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~~   80 (143)
T d1llda1           2 TKLAVIGAGA-VGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR   80 (143)
T ss_dssp             CEEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred             CEEEEECCCH-HHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEecccc
Confidence            4799999966 69999999998884  787776431                        12235689999999999975


Q ss_pred             C
Q 017679          287 N  287 (368)
Q Consensus       287 ~  287 (368)
                      .
T Consensus        81 ~   81 (143)
T d1llda1          81 Q   81 (143)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.66  E-value=0.014  Score=46.26  Aligned_cols=38  Identities=26%  Similarity=0.408  Sum_probs=33.3

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+-++|+|+|||+|-+ |.-+|..|.+.|.+||++++..
T Consensus        26 ~~~~~k~vvViGgG~i-G~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          26 VDPEVNNVVVIGSGYI-GIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCTTCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred             hccCCCEEEEECChHH-HHHHHHHhhccceEEEEEEecC
Confidence            3457899999998765 9999999999999999998864

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.65  E-value=0.0036  Score=55.13  Aligned_cols=36  Identities=19%  Similarity=0.197  Sum_probs=31.5

Q ss_pred             CccceEEEEccC---ccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g---~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |+||+++|.|++   ++ |+.+|..|+++||+|.++.+..
T Consensus         4 l~gK~~lItGaag~~GI-G~aiA~~la~~Ga~Vil~~~~~   42 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSI-AFHIARVAQEQGAQLVLTGFDR   42 (268)
T ss_dssp             TTTCEEEECCCSSTTCH-HHHHHHHHHHTTCEEEEEECSC
T ss_pred             CCCCEEEEECCCCCCHH-HHHHHHHHHHcCCEEEEEeCCh
Confidence            799999999952   45 9999999999999999998764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0026  Score=56.74  Aligned_cols=36  Identities=28%  Similarity=0.260  Sum_probs=33.2

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ++||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~   36 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN   36 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            479999999998878999999999999999999875

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.63  E-value=0.0033  Score=51.69  Aligned_cols=69  Identities=19%  Similarity=0.178  Sum_probs=49.0

Q ss_pred             eEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC---------------CHhhhccCCCEEEEecCCCCc---ccCCCc
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK---------------NPEQITSEADIVIAAAGVANL---VRGSWL  294 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~---------------~L~~~~~~ADIVIsAvG~p~~---I~~e~i  294 (368)
                      ++.+||.|.. |.+++..|.+.| .+|++++++..               +. +.++++|+||.|+. |..   +-.+..
T Consensus         2 kI~fIG~G~M-G~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~-~~v~~~Div~lavk-P~~~~~v~~~l~   78 (152)
T d1yqga2           2 NVYFLGGGNM-AAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATL-PELHSDDVLILAVK-PQDMEAACKNIR   78 (152)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSC-CCCCTTSEEEECSC-HHHHHHHHTTCC
T ss_pred             EEEEEcCcHH-HHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccccccc-ccccccceEEEecC-HHHHHHhHHHHh
Confidence            6899999886 999999877776 79999987631               22 34678999999985 432   222333


Q ss_pred             CCCcEEEEeec
Q 017679          295 KPGAVVLDVGT  305 (368)
Q Consensus       295 k~gavVIDvg~  305 (368)
                      ..+.+||.+.-
T Consensus        79 ~~~~~viS~~a   89 (152)
T d1yqga2          79 TNGALVLSVAA   89 (152)
T ss_dssp             CTTCEEEECCT
T ss_pred             hcccEEeeccc
Confidence            34678887653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.62  E-value=0.0037  Score=51.83  Aligned_cols=34  Identities=12%  Similarity=0.246  Sum_probs=30.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~  265 (368)
                      .+|||+|||+|.+ |..+|..|.++|++ |+++++.
T Consensus         3 ~~~kVaIIGaGpa-Gl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           3 YSAKIALLGAGPA-SISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             GGCCEEEECCSHH-HHHHHHHHHHTTCCCEEEEESS
T ss_pred             CCCEEEEECChHH-HHHHHHHHHHCCCCeEEEEEec
Confidence            4899999999887 99999999999985 9999875

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.60  E-value=0.011  Score=53.94  Aligned_cols=56  Identities=20%  Similarity=0.092  Sum_probs=45.2

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------------------CCHhhhccCCCEEE
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------------KNPEQITSEADIVI  280 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------------------~~L~~~~~~ADIVI  280 (368)
                      -+||+|+|.|++|.+|.-++..|+++|++|..+.|+.                             .++.+.+..+|.|+
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            4699999999999999999999999999998775431                             13446778899988


Q ss_pred             EecCC
Q 017679          281 AAAGV  285 (368)
Q Consensus       281 sAvG~  285 (368)
                      ...+.
T Consensus        89 ~~a~~   93 (342)
T d1y1pa1          89 HIASV   93 (342)
T ss_dssp             ECCCC
T ss_pred             hhccc
Confidence            66654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.59  E-value=0.0069  Score=49.65  Aligned_cols=53  Identities=23%  Similarity=0.290  Sum_probs=40.7

Q ss_pred             eEEEEccCccchHHHHHHHhhCC--CEEEEEeCCC-----------------------CCHhhhccCCCEEEEecCCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT-----------------------KNPEQITSEADIVIAAAGVAN  287 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t-----------------------~~L~~~~~~ADIVIsAvG~p~  287 (368)
                      |+.|||+|. ||.+++..|+.++  .++.++..+.                       .+..+.+++||+||.++|.|.
T Consensus         2 KI~IIGaG~-VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~   79 (140)
T d1a5za1           2 KIGIVGLGR-VGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQ   79 (140)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCCC
T ss_pred             EEEEECcCH-HHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEeccccc
Confidence            789999876 6999999888777  3777776431                       123467999999999998754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.58  E-value=0.0022  Score=57.91  Aligned_cols=36  Identities=25%  Similarity=0.445  Sum_probs=33.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      |+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   37 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN   37 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            799999999998888999999999999999999875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.56  E-value=0.0047  Score=51.52  Aligned_cols=94  Identities=14%  Similarity=0.162  Sum_probs=64.5

Q ss_pred             cccCCHHHHHHHHHHhCCCC-ccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC------------------CC-H
Q 017679          211 FIPCTPKGCIELLIRSGVEI-MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT------------------KN-P  269 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l-~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t------------------~~-L  269 (368)
                      -++|...-....|++.+..+ .|..|+|+|.|.+ |...++++...|+ .|+++.++.                  .+ .
T Consensus        11 ~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~v-G~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~   89 (172)
T d1h2ba2          11 PLADAGITAYRAVKKAARTLYPGAYVAIVGVGGL-GHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPV   89 (172)
T ss_dssp             GGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHH-HHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHH
T ss_pred             HHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChH-HHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHH
Confidence            45787677777777766544 5899999998775 9998888888886 667665542                  11 1


Q ss_pred             hhhc-----cCCCEEEEecCCCCcc--cCCCcCCCcEEEEeec
Q 017679          270 EQIT-----SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGT  305 (368)
Q Consensus       270 ~~~~-----~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~  305 (368)
                      ++..     ..+|+||.++|.+..+  .-+.+++|..++=+|.
T Consensus        90 ~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~  132 (172)
T d1h2ba2          90 KQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY  132 (172)
T ss_dssp             HHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCC
T ss_pred             HHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeC
Confidence            1111     2378999999877643  3456788766666775

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.51  E-value=0.0084  Score=52.08  Aligned_cols=53  Identities=13%  Similarity=0.202  Sum_probs=43.5

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC------Hhhhcc--CCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------PEQITS--EADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~------L~~~~~--~ADIVIsAvG~p  286 (368)
                      ||+|.|++|.+|+.++..|.++|.+|+.+.+..-|      +.+.++  +.|+||.+++..
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~   63 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT   63 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeecccc
Confidence            69999999999999999999999999999887543      234554  569999888754

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=95.49  E-value=0.0054  Score=51.20  Aligned_cols=75  Identities=13%  Similarity=0.101  Sum_probs=50.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCC----CEEEEEeCCC----------C-------CHhhhccCCCEEEEecCCCC--ccc
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT----------K-------NPEQITSEADIVIAAAGVAN--LVR  290 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t----------~-------~L~~~~~~ADIVIsAvG~p~--~I~  290 (368)
                      ||.|||++|.||+-+..+|+++.    .++..+.+.+          +       .-.+..+++|+||.|++...  -+-
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~~~~~DvvF~alp~~~s~~~~   81 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGGSYTEKVY   81 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCHHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhhhccccEEEEecCchHHHHHh
Confidence            69999999999999998776532    5666554432          0       11245689999999996321  123


Q ss_pred             CCCcCCC--cEEEEeecCCC
Q 017679          291 GSWLKPG--AVVLDVGTCPV  308 (368)
Q Consensus       291 ~e~ik~g--avVIDvg~n~~  308 (368)
                      +..++.|  .+|||.+..+.
T Consensus        82 ~~l~~~g~~~~VIDlSsdfR  101 (147)
T d1mb4a1          82 PALRQAGWKGYWIDAASTLR  101 (147)
T ss_dssp             HHHHHTTCCSEEEESSSTTT
T ss_pred             HHHHHcCCceEEEeCCcccc
Confidence            3334445  68999997654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.45  E-value=0.0035  Score=53.26  Aligned_cols=92  Identities=15%  Similarity=0.073  Sum_probs=54.8

Q ss_pred             cCCHHHHHHHHHHhCCCCcc--ceEEEEccCccchHHHHHHHhhCCCE-EEEEeCC--------------------CCCH
Q 017679          213 PCTPKGCIELLIRSGVEIMG--KNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL--------------------TKNP  269 (368)
Q Consensus       213 PcTa~gv~~lL~~~~i~l~G--K~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~--------------------t~~L  269 (368)
                      |++..-....|.+.+---.|  +.|+|-|+++.||..+++++...||+ |+.+.+.                    ++++
T Consensus        10 g~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~   89 (187)
T d1vj1a2          10 GMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNV   89 (187)
T ss_dssp             SHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCH
T ss_pred             hcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhH
Confidence            44445555555554322234  78999998777899999998889985 4444332                    2233


Q ss_pred             hhhccC-----CCEEEEecCCCCc-ccCCCcCCCcEEEEee
Q 017679          270 EQITSE-----ADIVIAAAGVANL-VRGSWLKPGAVVLDVG  304 (368)
Q Consensus       270 ~~~~~~-----ADIVIsAvG~p~~-I~~e~ik~gavVIDvg  304 (368)
                      .+.+++     +|+|+-++|.+.+ -..+.++++-.++-+|
T Consensus        90 ~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G  130 (187)
T d1vj1a2          90 AEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCG  130 (187)
T ss_dssp             HHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC-
T ss_pred             HHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEec
Confidence            333333     6777777765433 2345566666666665

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.43  E-value=0.011  Score=50.57  Aligned_cols=73  Identities=27%  Similarity=0.432  Sum_probs=51.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC---
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN---  287 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~---  287 (368)
                      .+|.|+|++|.||+-+..+|.++- .++..+.+++                     .+.++...++|+|+.|++...   
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~~~~~dvvf~a~p~~~s~~   81 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGASYD   81 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTHHHH
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhHhccccceEEEccccHHHHH
Confidence            379999999999999999999864 4665554432                     123345567999999997533   


Q ss_pred             cccCCCcCCCcEEEEeecCCC
Q 017679          288 LVRGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       288 ~I~~e~ik~gavVIDvg~n~~  308 (368)
                      ++..   ..+..|||.+....
T Consensus        82 ~~~~---~~~~~VIDlSadfR   99 (176)
T d1vkna1          82 LVRE---LKGVKIIDLGADFR   99 (176)
T ss_dssp             HHTT---CCSCEEEESSSTTT
T ss_pred             HHHh---hccceEEecCcccc
Confidence            2322   25789999997653

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.41  E-value=0.0091  Score=50.28  Aligned_cols=57  Identities=19%  Similarity=0.320  Sum_probs=43.7

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC------------------------CCHhhhccCCCEEEEec
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAA  283 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t------------------------~~L~~~~~~ADIVIsAv  283 (368)
                      ++-.||.|||+|. ||..+|.+|..+|-  ++.++..+.                        .+-.+.+++|||||.++
T Consensus        17 ~~~~KI~IIGaG~-VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvita   95 (159)
T d2ldxa1          17 LSRCKITVVGVGD-VGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITA   95 (159)
T ss_dssp             CCCCEEEEECCSH-HHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEECC
T ss_pred             CCCCeEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEEec
Confidence            4556899999976 69999999998883  788886441                        11246779999999999


Q ss_pred             CCCC
Q 017679          284 GVAN  287 (368)
Q Consensus       284 G~p~  287 (368)
                      |.|.
T Consensus        96 g~~~   99 (159)
T d2ldxa1          96 GARM   99 (159)
T ss_dssp             SCCC
T ss_pred             cccc
Confidence            8754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.39  E-value=0.0065  Score=54.98  Aligned_cols=37  Identities=32%  Similarity=0.223  Sum_probs=34.3

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+||+|+|.|++|.+|..++..|+++|++|.++.+..
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~   42 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA   42 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence            4799999999999999999999999999999998754

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=95.37  E-value=0.0034  Score=55.98  Aligned_cols=37  Identities=24%  Similarity=0.281  Sum_probs=34.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+||.++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~   39 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH   39 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3899999999988888999999999999999999875

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.0067  Score=56.18  Aligned_cols=92  Identities=13%  Similarity=0.199  Sum_probs=72.8

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCCC-----------------
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHALT-----------------  266 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~t-----------------  266 (368)
                      |-.|++..|+-.+.+|+..++|+.|+|.+ |..++.+|..    .|.       .+++++++-                 
T Consensus         8 ~lAglinAlki~gk~l~d~kiv~~GAGsA-g~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~   86 (294)
T d1pj3a1           8 ALAGLLAAQKVISKPISEHKILFLGAGEA-ALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPF   86 (294)
T ss_dssp             HHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGG
T ss_pred             HHHHHHHHHHHhCCCHHHcEEEEECccHH-HHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHh
Confidence            34678888999999999999999999987 8888888653    342       388887640                 


Q ss_pred             ---------CCHhhhcc--CCCEEEEecCCCCcccCCCcC------CCcEEEEeecCCC
Q 017679          267 ---------KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV  308 (368)
Q Consensus       267 ---------~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~~  308 (368)
                               .+|.+.++  ++|++|-..|.++.+++++++      +.-+|+=++ ||.
T Consensus        87 a~~~~~~~~~~L~e~i~~~kptvliG~S~~~g~ft~evi~~Ma~~~~~PIIFaLS-NPt  144 (294)
T d1pj3a1          87 THSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS-NPT  144 (294)
T ss_dssp             CBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred             hccccccchhHHHHHHHhcCCceEEEecCCCCcCCHHHHHHHHhcCCCcEEEEcc-CCC
Confidence                     14666655  899999999999999999986      778998887 554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=95.31  E-value=0.013  Score=51.84  Aligned_cols=60  Identities=20%  Similarity=0.293  Sum_probs=47.2

Q ss_pred             CCccceEEEEc----------------cCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhh
Q 017679          229 EIMGKNAVVIG----------------RSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQI  272 (368)
Q Consensus       229 ~l~GK~VvVIG----------------~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~  272 (368)
                      +|+||+|+|.+                .||-.|..+|..+.++||.||++|..+.                    .+.+.
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~~   82 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNAS   82 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHhh
Confidence            68999999986                4556699999999999999999987531                    13356


Q ss_pred             ccCCCEEEEecCCCCc
Q 017679          273 TSEADIVIAAAGVANL  288 (368)
Q Consensus       273 ~~~ADIVIsAvG~p~~  288 (368)
                      +.++|++|.++-...|
T Consensus        83 ~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          83 VQQQNIFIGCAAVADY   98 (223)
T ss_dssp             GGGCSEEEECCBCCSE
T ss_pred             hccceeEeeeechhhh
Confidence            7899999977765544

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=95.30  E-value=0.01  Score=52.62  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=31.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .||-++|.|++.-+|+.+|..|+++|++|.++.++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~   35 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG   35 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            48888999998888999999999999999999876

>d1mv8a3 c.26.3.1 (A:301-436) GDP-mannose 6-dehydrogenase, GDP-binding domain {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
domain: GDP-mannose 6-dehydrogenase, GDP-binding domain
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.29  E-value=0.022  Score=45.92  Aligned_cols=77  Identities=12%  Similarity=0.137  Sum_probs=57.4

Q ss_pred             CCCccceEEEEccC---------ccchHHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhc
Q 017679          228 VEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHAL-------------------------TKNPEQIT  273 (368)
Q Consensus       228 i~l~GK~VvVIG~g---------~~VGrpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~  273 (368)
                      ..+.+|+|.|+|-+         +.-...++..|..+|++|.+..-.                         ..++.+.+
T Consensus         9 ~~~~~kkI~ilGlafK~~t~D~R~Sps~~li~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i   88 (136)
T d1mv8a3           9 TSHDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVV   88 (136)
T ss_dssp             TTSSCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHH
T ss_pred             HhcCCCEEEEEEEEECCCCcchhcCHHHHHHHHHhhhhccccccCCCCCHHHHhhhhhhhhhhccccccceeehhhhhhh
Confidence            34678999999932         223678899999999999988520                         24677889


Q ss_pred             cCCCEEEEecCCCCccc-CCCcCCCcEEEEee
Q 017679          274 SEADIVIAAAGVANLVR-GSWLKPGAVVLDVG  304 (368)
Q Consensus       274 ~~ADIVIsAvG~p~~I~-~e~ik~gavVIDvg  304 (368)
                      +.||+||.++..+.|.. ...++++.+|||+-
T Consensus        89 ~~~D~ivi~t~h~~f~~l~~~~~~~~~I~D~~  120 (136)
T d1mv8a3          89 ASSDVLVLGNGDELFVDLVNKTPSGKKLVDLV  120 (136)
T ss_dssp             HHCSEEEECSCCGGGHHHHHSCCTTCEEEESS
T ss_pred             hhceEEEEEeCCHHHHHHHHHhcCCCEEEECC
Confidence            99999999999888732 12345678999964

>d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Escherichia coli [TaxId: 562]

Probab=95.29  E-value=0.13  Score=47.09  Aligned_cols=189  Identities=10%  Similarity=0.080  Sum_probs=113.5

Q ss_pred             eeecHHHHHHHHHHHHHHHHHHHHcCCCC---CEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCH----H
Q 017679           76 VIDGKSIAEEIRSGIDKEVRRMKKSIGKV---PGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTE----D  148 (368)
Q Consensus        76 ildGk~ia~~i~~~i~~~v~~l~~~~g~~---P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~----~  148 (368)
                      +|+-+.+.++=.+.|-+...++|+.....   =+....++ ..|.-.+- -.=..++.++|.++..+..+.+.+.    |
T Consensus         9 ~l~~~dls~~ei~~ll~~A~~~K~~~~~~~l~gk~iallF-~kpSTRTR-~SFe~A~~~LGg~~i~~~~~~~~~~~~kgE   86 (310)
T d1tuga1           9 IISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCF-FAASTRTR-LSFETSMHRLGASVVGFSDSANTSLGKKGE   86 (310)
T ss_dssp             BCCGGGCCHHHHHHHHHHHHHHHHSCCTTTTTTCEEEEEE-SSCCHHHH-HHHHHHHHHTTCEEEEEECCSSCHHHHTSC
T ss_pred             cCChhhCCHHHHHHHHHHHHHHhcCCCccccCCCEEEEEe-cCCCcchh-hhHHHHHHHhccccccccccccccccCCCc
Confidence            45545554433345555555565432111   12223333 34433443 3567899999999987766554321    4


Q ss_pred             HHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhC
Q 017679          149 EVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSG  227 (368)
Q Consensus       149 el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~  227 (368)
                      -+.+.++-|+.-  +++|++-.+  .|-........-      ..+-.+|.|-      .+.+.||=+.+ ++.+.++.|
T Consensus        87 si~Dt~~vls~~--~d~iv~R~~--~~~~~~~~~~~~------~~vPVINAg~------~~~~HP~Q~LaD~~Ti~e~~g  150 (310)
T d1tuga1          87 TLADTISVISTY--VDAIVMRHP--QEGAARLATEFS------GNVPVLNAGD------GSNQHPTQTLLDLFTIQETQG  150 (310)
T ss_dssp             CHHHHHHHHTTT--CSEEEEEES--SBTHHHHHTTTC------TTSCEEEEEE------TTSCCHHHHHHHHHHHHHHHS
T ss_pred             cHHHhhhHhhhc--chheeeech--hhhhhHHHHHhc------cCccEEECCC------CcccchHHHHHHHHHHHHHcC
Confidence            577777777653  788988755  333222221111      1134567642      23456998888 555555554


Q ss_pred             CCCccceEEEEcc--CccchHHHHHHHhhCC-CEEEEEeCC---------------------CCCHhhhccCCCEEEEec
Q 017679          228 VEIMGKNAVVIGR--SNIVGLPTSLLLQRHH-ATVSIVHAL---------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       228 i~l~GK~VvVIG~--g~~VGrpla~lL~~~g-AtVti~h~~---------------------t~~L~~~~~~ADIVIsAv  283 (368)
                       +++|++++.+|-  ++.|...++.++...+ ..+++|+-.                     +.++.+.+++||+|.+..
T Consensus       151 -~l~~~~i~~vGD~~~~~v~~S~~~~~~~~~~~~~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~  229 (310)
T d1tuga1         151 -RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTR  229 (310)
T ss_dssp             -CSSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHTTTCCEEEESCGGGTTTTCSEEEECC
T ss_pred             -CcccceEEEEeccccCcchHHHHHHHHhccCceEEEeCCcccccchhcccccccccceeeeeechhhhccCCceeeecc
Confidence             699999999997  2345777787788775 689988632                     146778899999988543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.27  E-value=0.011  Score=46.16  Aligned_cols=37  Identities=30%  Similarity=0.436  Sum_probs=31.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +-..|+++|||+|-+ |.-+|..|.+.|+.||++++..
T Consensus        18 ~~~p~~vvIiGgG~~-G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          18 KALPQHLVVVGGGYI-GLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SSCCSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCCeEEEECCCHH-HHHHHHHHhhcccceEEEeeec
Confidence            334689999998765 9999999999999999998764

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.26  E-value=0.024  Score=43.60  Aligned_cols=36  Identities=14%  Similarity=0.073  Sum_probs=31.1

Q ss_pred             ccceEEEEccCccchH-HHHHHHhhCCCEEEEEeCCCC
Q 017679          231 MGKNAVVIGRSNIVGL-PTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGr-pla~lL~~~gAtVti~h~~t~  267 (368)
                      +.|++-+||-|++ |. ++|.+|.++|.+|+-+.....
T Consensus         7 ~~~~ihfiGigG~-GMs~LA~~L~~~G~~VsGSD~~~~   43 (96)
T d1p3da1           7 RVQQIHFIGIGGA-GMSGIAEILLNEGYQISGSDIADG   43 (96)
T ss_dssp             TCCEEEEETTTST-THHHHHHHHHHHTCEEEEEESCCS
T ss_pred             hCCEEEEEEECHH-HHHHHHHHHHhCCCEEEEEeCCCC
Confidence            5689999999998 84 569999999999999987653

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.25  E-value=0.013  Score=48.94  Aligned_cols=55  Identities=20%  Similarity=0.284  Sum_probs=47.1

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEec
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      +|+|++|++||-++.|.+.++.+|...|+++++|.-.                         +.++.+.++.||+|.+-.
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~adviy~~~   80 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV   80 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCCChHHHHHHHHhhhcccceEEEecCHHHHhhhccEEeecc
Confidence            4799999999999999999999999999999999632                         246778899999998654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.22  E-value=0.0076  Score=51.00  Aligned_cols=33  Identities=36%  Similarity=0.524  Sum_probs=29.5

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -|+|+|||+|-+ |..+|..|+++|.+|+++.+.
T Consensus         6 ~~kVvVIGaGia-Gl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLGSGVI-GLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEECccHH-HHHHHHHHHHCCCCEEEEeCC
Confidence            478999998765 999999999999999999764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.014  Score=52.59  Aligned_cols=32  Identities=22%  Similarity=0.282  Sum_probs=29.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      |+|+|.|++|.+|+.++..|+++|.+|+.+.+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            89999999999999999999999999998853

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.012  Score=43.72  Aligned_cols=54  Identities=28%  Similarity=0.268  Sum_probs=42.9

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN  268 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~  268 (368)
                      |++-++..+.+.+..-+|.+++|.|+++-||....+++...|++|+.+.++.++
T Consensus        15 TA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          15 TAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             HHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             HHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            444445556666666789999999999999999999999999999877766544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.07  E-value=0.0046  Score=50.09  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=28.4

Q ss_pred             eEEEE-ccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          234 NAVVI-GRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       234 ~VvVI-G~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      ||.|| |.|+ +|+.+|..|++.|++|++..|+..
T Consensus         2 ki~vigGaG~-iG~alA~~la~~G~~V~l~~R~~e   35 (212)
T d1jaya_           2 RVALLGGTGN-LGKGLALRLATLGHEIVVGSRREE   35 (212)
T ss_dssp             EEEEETTTSH-HHHHHHHHHHTTTCEEEEEESSHH
T ss_pred             EEEEEeCCcH-HHHHHHHHHHHCCCEEEEEECCHH
Confidence            68898 6666 599999999999999999998753

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.02  E-value=0.014  Score=53.26  Aligned_cols=56  Identities=14%  Similarity=0.050  Sum_probs=45.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGV  285 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG~  285 (368)
                      -++.+|+|.|++|.+|+.++..|+++|.+|+++.+...                     ++.+.++..|.||..++.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~   89 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD   89 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence            47889999999999999999999999999999965321                     233456789999976653

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.00  E-value=0.017  Score=47.40  Aligned_cols=72  Identities=19%  Similarity=0.284  Sum_probs=53.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhccCCCEEEEecCCCCcc------cCCCc
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGVANLV------RGSWL  294 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~~ADIVIsAvG~p~~I------~~e~i  294 (368)
                      ||-+||-|.+ |.++|..|++.|..| +.+++..             +..+.+.++|++|+....+..+      =.+..
T Consensus         2 kIg~IGlG~M-G~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~   79 (156)
T d2cvza2           2 KVAFIGLGAM-GYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL   79 (156)
T ss_dssp             CEEEECCSTT-HHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred             eEEEEeHHHH-HHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc
Confidence            5899999986 999999999988765 5665531             2346677899999887654421      12456


Q ss_pred             CCCcEEEEeecCC
Q 017679          295 KPGAVVLDVGTCP  307 (368)
Q Consensus       295 k~gavVIDvg~n~  307 (368)
                      ++|.++||.++..
T Consensus        80 ~~~~~iid~sT~~   92 (156)
T d2cvza2          80 REGTYWVDATSGE   92 (156)
T ss_dssp             CTTEEEEECSCCC
T ss_pred             cccccccccccCC
Confidence            8899999998753

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.99  E-value=0.012  Score=48.33  Aligned_cols=52  Identities=15%  Similarity=0.310  Sum_probs=40.3

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      |+.|||+|. ||.++|..|+.++.  ++.++..+.                          .+ .+.+++||+||.++|.
T Consensus         2 KI~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d-~~~~~~adiVvitag~   79 (142)
T d1ojua1           2 KLGFVGAGR-VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL   79 (142)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred             EEEEECcCH-HHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC-HHHhccccEEEEeccc
Confidence            789999866 69999999987773  677775331                          23 4789999999999986


Q ss_pred             CC
Q 017679          286 AN  287 (368)
Q Consensus       286 p~  287 (368)
                      |.
T Consensus        80 ~~   81 (142)
T d1ojua1          80 AR   81 (142)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.99  E-value=0.013  Score=51.25  Aligned_cols=38  Identities=18%  Similarity=0.278  Sum_probs=32.7

Q ss_pred             CccceEEEEccCc--cchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          230 IMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       230 l~GK~VvVIG~g~--~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      |+||+++|.|++.  =+|+.+|..|+++|++|.++.++.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~   42 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK   42 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            7999999999764  2389999999999999999987643

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.018  Score=47.54  Aligned_cols=53  Identities=25%  Similarity=0.409  Sum_probs=38.7

Q ss_pred             eEEEEccCccchHHHHHHHh-hCC--CEEEEEeCCC-----------------------CCHhhhccCCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQ-RHH--ATVSIVHALT-----------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~-~~g--AtVti~h~~t-----------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      ||.|||++|-||..+|.+|. +.+  .++.+.....                       .+..+.+++|||||.+.|.|
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~~   80 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVR   80 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSCC
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCcc
Confidence            79999975567999999875 333  4777775421                       12345789999999999975

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.96  E-value=0.013  Score=51.33  Aligned_cols=35  Identities=11%  Similarity=0.173  Sum_probs=32.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +||+|+|.|+++-+|+.++..|+++|++|.++.+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~   35 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV   35 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            69999999998888999999999999999998654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.91  E-value=0.016  Score=51.83  Aligned_cols=49  Identities=29%  Similarity=0.191  Sum_probs=39.9

Q ss_pred             cCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEE
Q 017679          213 PCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV  262 (368)
Q Consensus       213 PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~  262 (368)
                      -.|.+|+...    +++.+.+++||+|+|=|.|+ ||..+|++|.+.||+|+.+
T Consensus         8 ~ATg~Gv~~~~~~~~~~~~~~l~g~~v~IqGfGn-VG~~~a~~L~~~Gakvv~v   60 (242)
T d1v9la1           8 YATGFGVAVATREMAKKLWGGIEGKTVAIQGMGN-VGRWTAYWLEKMGAKVIAV   60 (242)
T ss_dssp             GHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSH-HHHHHHHHHHTTTCEEEEE
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEe
Confidence            3566775544    55677899999999999988 5999999999999987644

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.89  E-value=0.011  Score=48.99  Aligned_cols=54  Identities=15%  Similarity=0.257  Sum_probs=39.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC----E-E--EEEeCC--------------------------CCCHhhhccCCCEE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA----T-V--SIVHAL--------------------------TKNPEQITSEADIV  279 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA----t-V--ti~h~~--------------------------t~~L~~~~~~ADIV  279 (368)
                      -||+|||+++.||..++.+|+..+.    . +  .++...                          +.+..+.+++||+|
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~advV   84 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYA   84 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccEE
Confidence            4899999977789999999987652    1 1  122110                          14567889999999


Q ss_pred             EEecCCC
Q 017679          280 IAAAGVA  286 (368)
Q Consensus       280 IsAvG~p  286 (368)
                      |.+.|.|
T Consensus        85 iitaG~~   91 (154)
T d1y7ta1          85 LLVGAAP   91 (154)
T ss_dssp             EECCCCC
T ss_pred             EeecCcC
Confidence            9999965

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.85  E-value=0.0077  Score=50.96  Aligned_cols=76  Identities=24%  Similarity=0.392  Sum_probs=52.2

Q ss_pred             ceEEEEccCccchHHHHHHHhhC-CCEEEEEe--C-CC---C---------------------CHhhhccCCCEEEEecC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH-HATVSIVH--A-LT---K---------------------NPEQITSEADIVIAAAG  284 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~-gAtVti~h--~-~t---~---------------------~L~~~~~~ADIVIsAvG  284 (368)
                      .+|.|||++|.||+-+..+|.++ ..++.-+.  + ..   +                     +......+.|+++.|.+
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~alp   81 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATA   81 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECSC
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeecccc
Confidence            37999999999999999999998 55654332  1 11   0                     11223467899999986


Q ss_pred             CCC--cccCCCcCCCcEEEEeecCCC
Q 017679          285 VAN--LVRGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       285 ~p~--~I~~e~ik~gavVIDvg~n~~  308 (368)
                      ...  .+-+...+.|..|||.+..+.
T Consensus        82 ~~~s~~~~~~~~~~~~~vIDlSadfR  107 (179)
T d2g17a1          82 HEVSHDLAPQFLQAGCVVFDLSGAFR  107 (179)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECSSTTS
T ss_pred             chhHHHHhhhhhhcCceeeccccccc
Confidence            422  133345677899999997653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.70  E-value=0.015  Score=50.71  Aligned_cols=34  Identities=6%  Similarity=0.070  Sum_probs=30.7

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -+||+|+|++|.+|+.++..|+++|.+|+++.|.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~   36 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRP   36 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence            3579999999999999999999999999998775

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.70  E-value=0.0077  Score=51.39  Aligned_cols=32  Identities=16%  Similarity=0.148  Sum_probs=28.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      |+|.|||+|-+ |..+|.++++.|.+|+++.+.
T Consensus         5 ~~vaViGaG~m-G~~iA~~~a~~G~~V~l~D~~   36 (186)
T d1wdka3           5 KQAAVLGAGIM-GGGIAYQSASKGTPILMKDIN   36 (186)
T ss_dssp             SSEEEECCHHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEECcCHH-HHHHHHHHHhCCCeEEEEECC
Confidence            68999999765 999999999999999999765

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.69  E-value=0.015  Score=48.04  Aligned_cols=55  Identities=11%  Similarity=0.173  Sum_probs=39.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC-------EEEEEeCC--------------------------CCCHhhhccCCCEE
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA-------TVSIVHAL--------------------------TKNPEQITSEADIV  279 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA-------tVti~h~~--------------------------t~~L~~~~~~ADIV  279 (368)
                      -||+|||+++.||..++..|...+.       ........                          +.+.++.++++|||
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvV   83 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVA   83 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceEE
Confidence            4899999866789999999876541       23333211                          13567889999999


Q ss_pred             EEecCCCC
Q 017679          280 IAAAGVAN  287 (368)
Q Consensus       280 IsAvG~p~  287 (368)
                      |.+.|.|.
T Consensus        84 Vitag~~~   91 (154)
T d5mdha1          84 ILVGSMPR   91 (154)
T ss_dssp             EECCSCCC
T ss_pred             EEecccCC
Confidence            99999764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.56  E-value=0.024  Score=46.86  Aligned_cols=53  Identities=11%  Similarity=0.050  Sum_probs=40.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEE--EEEeCCC--------------------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATV--SIVHALT--------------------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtV--ti~h~~t--------------------~~L~~~~~~ADIVIsAvG~  285 (368)
                      ++|+|.|++|.+|+.++..|+++|.+|  +...|..                    .++.+.++.+|.||..++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEee
Confidence            689999999999999999999999654  4344432                    1234667889999977664

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.48  E-value=0.011  Score=50.75  Aligned_cols=36  Identities=19%  Similarity=0.288  Sum_probs=32.0

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .|.++|.|++.-+|+.+|..|+++||+|.++.++..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   36 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   36 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            488999998877899999999999999999988653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.44  E-value=0.02  Score=45.48  Aligned_cols=52  Identities=17%  Similarity=0.248  Sum_probs=39.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC----------------------Hhh-hccCCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN----------------------PEQ-ITSEADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~----------------------L~~-~~~~ADIVIsAvG~p  286 (368)
                      +|+|+|.|.. |+.++..|.++|..|+++......                      |.+ .+.+||.++.+++..
T Consensus         2 ~IvI~G~G~~-G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRV-GYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHH-HHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcH
Confidence            7999999875 999999999999999999764210                      222 257788888877754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.39  E-value=0.018  Score=50.97  Aligned_cols=33  Identities=24%  Similarity=0.282  Sum_probs=28.6

Q ss_pred             ceE-EEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNA-VVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~V-vVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ||| +|.|+|.-+|+.+|..|+++|++|.++.++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~   34 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN   34 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence            565 666888777999999999999999999876

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.36  E-value=0.051  Score=41.22  Aligned_cols=45  Identities=13%  Similarity=0.082  Sum_probs=35.2

Q ss_pred             ceEEEEccCccchH-HHHHHHhhCCCEEEEEeCCCCCHhhhccCCCE
Q 017679          233 KNAVVIGRSNIVGL-PTSLLLQRHHATVSIVHALTKNPEQITSEADI  278 (368)
Q Consensus       233 K~VvVIG~g~~VGr-pla~lL~~~gAtVti~h~~t~~L~~~~~~ADI  278 (368)
                      .++-.||-|++ |. ++|.+|+++|+.|+-+++......+.+++..+
T Consensus         2 ~~ihfiGIgG~-GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi   47 (89)
T d1j6ua1           2 MKIHFVGIGGI-GMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGI   47 (89)
T ss_dssp             CEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTC
T ss_pred             cEEEEEeECHH-HHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCC
Confidence            47889999998 88 78999999999999998875444444555554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.33  E-value=0.017  Score=48.78  Aligned_cols=54  Identities=13%  Similarity=0.129  Sum_probs=40.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-----------CCHh----hhccCCCEEEEecCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-----------KNPE----QITSEADIVIAAAGVA  286 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-----------~~L~----~~~~~ADIVIsAvG~p  286 (368)
                      |+|+|+|++|.+|+.++..|+++|.  +|+.+.|+.           .++.    ......|.||.++|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhhhhccccchheeeeeeeee
Confidence            8999999999999999999999986  666665542           1222    2234469999888753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.31  E-value=0.019  Score=48.55  Aligned_cols=34  Identities=24%  Similarity=0.330  Sum_probs=30.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +-++|+|||+|-. |...|..|+++|.+|+|+...
T Consensus         4 ~~~kViVIGaG~a-GL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGSGVS-GLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECCBHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECCCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence            4568999999888 999999999999999999764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.27  E-value=0.014  Score=50.51  Aligned_cols=51  Identities=18%  Similarity=0.219  Sum_probs=37.5

Q ss_pred             CCHHHHHHHHHHhC-CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          214 CTPKGCIELLIRSG-VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       214 cTa~gv~~lL~~~~-i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ......++..+..- -.-..|+|+|||+|-+ |..+|..|+++|.+|+|+.+.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~pkkV~IIGaG~a-GLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          11 NDYEEFLEIARNGLKATSNPKHVVIVGAGMA-GLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             TTHHHHHHHHHHCSCCCSSCCEEEEECCBHH-HHHHHHHHHHHTCEEEEECSS
T ss_pred             ccHHHHHHHHhcCCCCCCCCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEeCC
Confidence            33455555544321 1235689999998876 999999999999999999764

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.25  E-value=0.051  Score=45.53  Aligned_cols=95  Identities=17%  Similarity=0.190  Sum_probs=61.3

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------C
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------N  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------~  268 (368)
                      .++|.-.-.+..+.+..---.|.+|+|+|.|++ |...++.+...|| .|+++.....                     .
T Consensus         8 ~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~i-Gl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~   86 (174)
T d1e3ia2           8 LIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCV-GLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKP   86 (174)
T ss_dssp             GGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSC
T ss_pred             HhhhHHHHHHHHHHHhhCCCCCCEEEEECCChH-HHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhh
Confidence            456733333333333333357899999999875 9999999999998 6777765421                     1


Q ss_pred             Hhhhc-----cCCCEEEEecCCCCccc--CCCcCCC-cEEEEeecC
Q 017679          269 PEQIT-----SEADIVIAAAGVANLVR--GSWLKPG-AVVLDVGTC  306 (368)
Q Consensus       269 L~~~~-----~~ADIVIsAvG~p~~I~--~e~ik~g-avVIDvg~n  306 (368)
                      .+...     .-+|++|-++|.+..+.  -+++++| -.++=+|..
T Consensus        87 ~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~  132 (174)
T d1e3ia2          87 VQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK  132 (174)
T ss_dssp             HHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCS
T ss_pred             hhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCC
Confidence            11111     45799999999987653  3567774 344557764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.19  E-value=0.017  Score=46.29  Aligned_cols=34  Identities=18%  Similarity=0.352  Sum_probs=29.3

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCC--CEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~  265 (368)
                      .||+|+|||+|-+ |..+|..|.+.+  .+||++++.
T Consensus         1 ~gkrivIvGgG~~-G~e~A~~l~~~~~~~~Vtlie~~   36 (186)
T d1fcda1           1 AGRKVVVVGGGTG-GATAAKYIKLADPSIEVTLIEPN   36 (186)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCCcEEEECccHH-HHHHHHHHHHcCCCCcEEEEECC
Confidence            4899999998876 999999999877  589998754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.11  E-value=0.039  Score=42.83  Aligned_cols=36  Identities=25%  Similarity=0.350  Sum_probs=31.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      ..|+++|||+|-+ |.-+|..|.+.|.+||++++...
T Consensus        21 ~p~~v~IiGgG~i-g~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGGGYI-GIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECCCcc-ceeeeeeecccccEEEEEEecce
Confidence            4589999998765 99999999999999999998753

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=94.11  E-value=0.04  Score=46.71  Aligned_cols=57  Identities=11%  Similarity=0.135  Sum_probs=41.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCC---C----EEEEEeCC--------------------------CCCHhhhccCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHH---A----TVSIVHAL--------------------------TKNPEQITSEAD  277 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~g---A----tVti~h~~--------------------------t~~L~~~~~~AD  277 (368)
                      +.-||+|+|+++.||.+++.+|++.+   .    .+.+.+..                          +.+..+.++++|
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aD  102 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD  102 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCc
Confidence            45589999997778999999988643   1    23333321                          246778899999


Q ss_pred             EEEEecCCCC
Q 017679          278 IVIAAAGVAN  287 (368)
Q Consensus       278 IVIsAvG~p~  287 (368)
                      +||...|.|.
T Consensus       103 vVvi~ag~~r  112 (175)
T d7mdha1         103 WALLIGAKPR  112 (175)
T ss_dssp             EEEECCCCCC
T ss_pred             eEEEeeccCC
Confidence            9999888653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.10  E-value=0.024  Score=44.63  Aligned_cols=34  Identities=15%  Similarity=0.141  Sum_probs=30.8

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+++|||+|-+ |.-+|..|.+.|++||++++..
T Consensus        22 p~~v~IiGgG~i-G~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGSGYI-AVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECCchH-HHHHHHHHHhccccceeeehhc
Confidence            589999998765 9999999999999999999865

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.09  E-value=0.04  Score=47.61  Aligned_cols=38  Identities=32%  Similarity=0.405  Sum_probs=32.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHh--------------------hCCC-EEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQ--------------------RHHA-TVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~--------------------~~gA-tVti~h~~t  266 (368)
                      .++.||+|+|||.|++ +.=+|..|+                    +.|+ +|+++-|++
T Consensus        35 ~~~~gk~VvVIGgGNv-AlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg   93 (216)
T d1lqta1          35 PDLSGARAVVIGNGNV-ALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG   93 (216)
T ss_dssp             CCCCSSEEEEECCSHH-HHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred             ccccCceEEEECCCch-hHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence            5678999999998885 999998887                    5676 799998875

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.08  E-value=0.046  Score=42.37  Aligned_cols=36  Identities=14%  Similarity=0.185  Sum_probs=32.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..+|+++|||.|-+ |.-+|..|.+.|+.|+++++..
T Consensus        20 ~~~~~vvVvGgG~i-g~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGGSKT-AVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECCCHH-HHHHHHHHHhcchhheEeeccc
Confidence            36899999997765 9999999999999999999864

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=93.98  E-value=0.028  Score=50.65  Aligned_cols=49  Identities=18%  Similarity=0.213  Sum_probs=40.3

Q ss_pred             cCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEE
Q 017679          213 PCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV  262 (368)
Q Consensus       213 PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~  262 (368)
                      -.|.+|++..    |++.+.+++||+|+|=|.|+ ||..++.+|.+.|+.|+.+
T Consensus        13 eATG~Gv~~~~~~~~~~~~~~l~g~~v~IQGfGn-VG~~~a~~L~e~Gakvvav   65 (255)
T d1bgva1          13 EATGYGSVYYVEAVMKHENDTLVGKTVALAGFGN-VAWGAAKKLAELGAKAVTL   65 (255)
T ss_dssp             THHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSH-HHHHHHHHHHHHTCEEEEE
T ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEE
Confidence            4677776554    55668999999999999987 5999999999999986543

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=93.98  E-value=0.018  Score=53.52  Aligned_cols=91  Identities=7%  Similarity=0.107  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCCC------------------
Q 017679          216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHALT------------------  266 (368)
Q Consensus       216 a~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~t------------------  266 (368)
                      -.|++..|+-.+.+|+..++++.|+|.+ |..++.+|..    +|.       .+++|+++-                  
T Consensus         9 lAglinAlki~gk~l~d~kivi~GAGaA-g~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r~d~~~~k~~~a~   87 (308)
T d1o0sa1           9 VAGLLTCTRVTKKLVSQEKYLFFGAGAA-STGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAK   87 (308)
T ss_dssp             HHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCB
T ss_pred             HHHHHHHHHHhCCCHHHcEEEEECcCHH-HHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCCcccCHHHHHHHH
Confidence            4678888999999999999999999987 9888887654    332       488887641                  


Q ss_pred             -----CCHhhhcc--CCCEEEEecCCCCcccCCCcC------CCcEEEEeecCCC
Q 017679          267 -----KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV  308 (368)
Q Consensus       267 -----~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~~  308 (368)
                           .+|.+.++  +-+++|-+.|.++.+++++++      +.-+|+=++ ||.
T Consensus        88 ~~~~~~~l~~~i~~~kptvliG~s~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt  141 (308)
T d1o0sa1          88 DMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALS-NPT  141 (308)
T ss_dssp             SSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred             hcccCCcHHHHHhccccccEEecccccCCCCHHHHHHHHhhCCCcEEEEcc-CCC
Confidence                 23445444  347899999999999999985      678888887 554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.98  E-value=0.096  Score=43.70  Aligned_cols=97  Identities=14%  Similarity=0.126  Sum_probs=64.0

Q ss_pred             ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC--------------------C
Q 017679          210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK--------------------N  268 (368)
Q Consensus       210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~--------------------~  268 (368)
                      ..++|.-.-.+..+.+..---.|..|+|+|.|++ |...++.+...|+ +|+++.....                    +
T Consensus         8 a~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~Ggv-Gl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~   86 (176)
T d1d1ta2           8 CLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGV-GLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTK   86 (176)
T ss_dssp             GGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSS
T ss_pred             HhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCch-hHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccch
Confidence            3457754444444433333457999999999885 9999999999995 8888875421                    1


Q ss_pred             -Hh---hhc--cCCCEEEEecCCCCcc-c-CCCc-CCCcEEEEeecCC
Q 017679          269 -PE---QIT--SEADIVIAAAGVANLV-R-GSWL-KPGAVVLDVGTCP  307 (368)
Q Consensus       269 -L~---~~~--~~ADIVIsAvG~p~~I-~-~e~i-k~gavVIDvg~n~  307 (368)
                       .+   +.+  ..+|++|.++|.+..+ . ...+ +.+-.++-+|...
T Consensus        87 ~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~  134 (176)
T d1d1ta2          87 PISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPP  134 (176)
T ss_dssp             CHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCC
T ss_pred             HHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccc
Confidence             11   212  4689999999987643 2 2334 4546788888764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=93.96  E-value=0.041  Score=45.19  Aligned_cols=54  Identities=20%  Similarity=0.318  Sum_probs=39.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------------CCHhhhccCCCEEEEecCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGVA  286 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~p  286 (368)
                      ||.|||+.|-||..+|..|..++.  ++.++....                         ..-.+.+++|||||.+.|.|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG~~   81 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGIP   81 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEecccc
Confidence            799999644569999999999884  677765211                         01135678999999988865


Q ss_pred             C
Q 017679          287 N  287 (368)
Q Consensus       287 ~  287 (368)
                      .
T Consensus        82 ~   82 (142)
T d1o6za1          82 R   82 (142)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.96  E-value=0.027  Score=44.05  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=31.2

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .|+++|||+|-+ |.-+|..|.+.|++||++++...
T Consensus        21 p~~vvIiGgG~i-g~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYI-GVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECCChh-hHHHHHHhhccccEEEEEeecch
Confidence            589999998765 99999999999999999998753

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=93.93  E-value=0.063  Score=47.47  Aligned_cols=86  Identities=20%  Similarity=0.265  Sum_probs=68.0

Q ss_pred             HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC----------------------------CC
Q 017679          217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL----------------------------TK  267 (368)
Q Consensus       217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~----------------------------t~  267 (368)
                      .|++..++-.+.+|+..++++.|+|.+ |..++.+|.+.+. +++.++++                            ..
T Consensus        11 Agll~a~~~~g~~l~d~riv~~GAGsA-g~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~~~~   89 (222)
T d1vl6a1          11 AAFLNALKLTEKKIEEVKVVVNGIGAA-GYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSG   89 (222)
T ss_dssp             HHHHHHHHHHTCCTTTCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCS
T ss_pred             HHHHHHHHHhCCChhhcEEEEEChHHH-HHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhhcchhhhc
Confidence            678888999999999999999999988 9999999999886 79999875                            13


Q ss_pred             CHhhhccCCCEEEEecCCCCcccCCCcC---CCcEEEEee
Q 017679          268 NPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVG  304 (368)
Q Consensus       268 ~L~~~~~~ADIVIsAvG~p~~I~~e~ik---~gavVIDvg  304 (368)
                      ++.+.++.+|+++... .++.++.|+++   +.-+|+=++
T Consensus        90 ~l~~~l~g~~~~~g~~-~~~~~~~e~m~~~~~rPIIFpLS  128 (222)
T d1vl6a1          90 DLETALEGADFFIGVS-RGNILKPEWIKKMSRKPVIFALA  128 (222)
T ss_dssp             CHHHHHTTCSEEEECS-CSSCSCHHHHTTSCSSCEEEECC
T ss_pred             chHhhccCcceecccc-ccccccHHHHhhcCCCCEEEecC
Confidence            5677888999877554 46667665543   356776666

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.91  E-value=0.014  Score=45.15  Aligned_cols=38  Identities=13%  Similarity=0.059  Sum_probs=32.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++||+|+|||.|.. |.=+|..|++...+|++++++.
T Consensus        28 ~~f~gK~VlVVG~g~S-a~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGASS-ANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSSHH-HHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCCCC-HHHHHHHHHHhcCEEEEEEecC
Confidence            3579999999999998 9999999998888777776654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.90  E-value=0.032  Score=44.16  Aligned_cols=35  Identities=20%  Similarity=0.268  Sum_probs=31.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+++|||+|-+ |.-+|..|.++|.+||++++..
T Consensus        29 ~~~~vvIIGgG~i-G~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVGGGVI-GLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECcchh-HHHHHHHhhcccceEEEEeecc
Confidence            5799999998765 9999999999999999998765

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.83  E-value=0.022  Score=48.96  Aligned_cols=35  Identities=9%  Similarity=0.074  Sum_probs=31.9

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      -|||+|+|++|.+|+.++..|+++|.+|+++.|..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            48899999999999999999999999999988754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=93.82  E-value=0.052  Score=46.91  Aligned_cols=34  Identities=15%  Similarity=0.136  Sum_probs=29.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      |-|+|.|++.-+|+.+|..|+++|++|.++.++.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            5567779877779999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.76  E-value=0.03  Score=44.33  Aligned_cols=34  Identities=15%  Similarity=0.212  Sum_probs=30.9

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+++|||.|-+ |.-+|..|.+.|.+||++++..
T Consensus        22 pk~vvIvGgG~i-G~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYI-AVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCCcc-HHHHHHHHhcCCcEEEEEeecc
Confidence            489999998765 9999999999999999999875

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.69  E-value=0.02  Score=47.62  Aligned_cols=73  Identities=11%  Similarity=0.158  Sum_probs=50.5

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC-------------------------HhhhccCCCEEEEecCCCCc
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-------------------------PEQITSEADIVIAAAGVANL  288 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~-------------------------L~~~~~~ADIVIsAvG~p~~  288 (368)
                      ||-|||-|.. |.++|..|+++|.+|++++++...                         +...+..+++++..+.....
T Consensus         3 kIGvIGlG~M-G~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (178)
T d1pgja2           3 DVGVVGLGVM-GANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA   81 (178)
T ss_dssp             SEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred             EEEEEeehHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcch
Confidence            6899999986 999999999999999999875321                         11233455555555443221


Q ss_pred             c------cCCCcCCCcEEEEeecCC
Q 017679          289 V------RGSWLKPGAVVLDVGTCP  307 (368)
Q Consensus       289 I------~~e~ik~gavVIDvg~n~  307 (368)
                      +      -...+++|.+++|.+...
T Consensus        82 ~~~~~~~~~~~~~~~~iii~~st~~  106 (178)
T d1pgja2          82 TDSTIEQLKKVFEKGDILVDTGNAH  106 (178)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred             hhhhhhhhhhhccccceecccCccc
Confidence            1      123568899999998754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.64  E-value=0.025  Score=44.58  Aligned_cols=35  Identities=26%  Similarity=0.292  Sum_probs=31.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+++|||+|-+ |.-+|..|.+.|++||++++..
T Consensus        31 ~~~~vvIiGgG~i-G~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGGGFI-GLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEECSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCcEEEECCcHH-HHHHHHHhhcccceEEEEeccc
Confidence            4689999998765 9999999999999999998764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.60  E-value=0.033  Score=43.98  Aligned_cols=34  Identities=26%  Similarity=0.348  Sum_probs=30.7

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      -|+++|||+|-+ |.-+|.+|.+.|+.||++++..
T Consensus        23 p~~~vIiG~G~i-g~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGII-GLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECCCch-HHHHHHHHHhhCcceeEEEecc
Confidence            489999998765 9999999999999999998865

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=93.55  E-value=0.059  Score=45.59  Aligned_cols=76  Identities=17%  Similarity=0.105  Sum_probs=49.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC----------------------CHhhhccCCCEEEEecCCCC--
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK----------------------NPEQITSEADIVIAAAGVAN--  287 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~----------------------~L~~~~~~ADIVIsAvG~p~--  287 (368)
                      -||.|||++|.||+-+.++|.++- .+++.+.+.+.                      ...+...++|+|+.|++.-.  
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~~s~   85 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHGTTQ   85 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSSHHH
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccchHH
Confidence            479999999999999999999874 46665554321                      11234578999999986432  


Q ss_pred             cccCCCcCCCcEEEEeecCCC
Q 017679          288 LVRGSWLKPGAVVLDVGTCPV  308 (368)
Q Consensus       288 ~I~~e~ik~gavVIDvg~n~~  308 (368)
                      .+-+...+.+.+|+|.+..+.
T Consensus        86 ~~~~~l~~~~~~v~~~~~~~~  106 (183)
T d2cvoa1          86 EIIKGLPQELKIVDLSADFRL  106 (183)
T ss_dssp             HHHHTSCSSCEEEECSSTTTC
T ss_pred             HHHHHHHhcCcccccchhhhc
Confidence            122334455555555554443

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=93.55  E-value=0.029  Score=51.79  Aligned_cols=92  Identities=15%  Similarity=0.236  Sum_probs=70.8

Q ss_pred             CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhC----C-------CEEEEEeCCC-----------------
Q 017679          215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----H-------ATVSIVHALT-----------------  266 (368)
Q Consensus       215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~----g-------AtVti~h~~t-----------------  266 (368)
                      |-.|++..++-.+.+|+..++|+.|+|-+ |..++.+|...    |       ..+++|+++-                 
T Consensus         8 ~lAglinAlki~gk~l~d~kiV~~GAGsA-g~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~~~a   86 (298)
T d1gq2a1           8 AVAGLLAALRITKNRLSDHTVLFQGAGEA-ALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFA   86 (298)
T ss_dssp             HHHHHHHHHHHHTSCGGGCCEEEECCSHH-HHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGC
T ss_pred             HHHHHHHHHHHhCCCHHHcEEEEECccHH-HHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHHHHH
Confidence            34678889999999999999999999987 98888887532    3       2588887651                 


Q ss_pred             ------CCHhhhcc--CCCEEEEecCCCCcccCCCcC------CCcEEEEeecCCC
Q 017679          267 ------KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV  308 (368)
Q Consensus       267 ------~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~~  308 (368)
                            .++.+.++  +.+++|-+.|.++.++.++++      +.-+|+=++ ||.
T Consensus        87 ~~~~~~~~l~~~i~~vkptvliG~s~~~g~ft~evv~~ma~~~~~PIIFaLS-NPt  141 (298)
T d1gq2a1          87 HEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALS-NPT  141 (298)
T ss_dssp             BSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred             HHhhhhhhhHHHhhccChheeEecccccCcCCHHHHHHHHhhCCCCEEEEcc-CCC
Confidence                  23445444  378999999999999999886      577888887 553

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.48  E-value=0.015  Score=51.31  Aligned_cols=39  Identities=15%  Similarity=0.078  Sum_probs=33.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhh---CCCEEEEEeCCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQR---HHATVSIVHALTK  267 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~---~gAtVti~h~~t~  267 (368)
                      .|+||.++|-|+|.-+|+.+|..|++   +|++|.++.|+..
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~   44 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSES   44 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHH
Confidence            58999999989987779999999975   7999999987643

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.47  E-value=0.031  Score=50.98  Aligned_cols=35  Identities=17%  Similarity=0.213  Sum_probs=31.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +.|+|+|||+|-. |..+|..|+++|..|+|+.++.
T Consensus         1 k~KKI~IIGaG~s-GL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAGFS-GAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHhCCCCEEEEECCC
Confidence            4699999999887 9999999999999999998764

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.45  E-value=0.055  Score=44.94  Aligned_cols=53  Identities=17%  Similarity=0.026  Sum_probs=38.0

Q ss_pred             eEEEEccCccchHHHHHHH-h-hC----CCEEEEEeCC-----------------------CCCHhhhccCCCEEEEecC
Q 017679          234 NAVVIGRSNIVGLPTSLLL-Q-RH----HATVSIVHAL-----------------------TKNPEQITSEADIVIAAAG  284 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL-~-~~----gAtVti~h~~-----------------------t~~L~~~~~~ADIVIsAvG  284 (368)
                      |++|||+|. +|.+.+... + ..    ..++.+....                       +.+.++.+++||+||.++|
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~   80 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFR   80 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCC
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEecc
Confidence            689999887 487776442 2 22    2478877543                       3467889999999999999


Q ss_pred             CCC
Q 017679          285 VAN  287 (368)
Q Consensus       285 ~p~  287 (368)
                      .+.
T Consensus        81 ~~~   83 (162)
T d1up7a1          81 PGG   83 (162)
T ss_dssp             TTH
T ss_pred             cCC
Confidence            763

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.43  E-value=0.042  Score=48.80  Aligned_cols=48  Identities=25%  Similarity=0.265  Sum_probs=38.3

Q ss_pred             CCHHHHH----HHHHHhCCCCccceEEEEccCccchHHHHHHHhh-CCCEEEEE
Q 017679          214 CTPKGCI----ELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-HHATVSIV  262 (368)
Q Consensus       214 cTa~gv~----~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~-~gAtVti~  262 (368)
                      +|.+|+.    +.+++.+.+++||+|+|=|.|+ ||..++..|.+ .|+.|+.+
T Consensus         9 ATg~Gv~~~~~~~~~~~~~~l~g~~vaIqG~Gn-VG~~~a~~L~~e~Ga~vv~v   61 (234)
T d1b26a1           9 ATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGN-VGQFAALLISQELGSKVVAV   61 (234)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSH-HHHHHHHHHHHHHCCEEEEE
T ss_pred             hhhHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHhcCCceEEe
Confidence            4666655    4567788999999999999988 59999999975 59986654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.40  E-value=0.04  Score=44.16  Aligned_cols=36  Identities=22%  Similarity=0.362  Sum_probs=32.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .+|+++|||+|-+ |.-+|..|.+.|.+||++++...
T Consensus        34 ~~k~v~VIGgG~i-G~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGGGYI-GLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECCchH-HHHHHHHHHhhCcceeeeeeccc
Confidence            5799999998765 99999999999999999998753

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.36  E-value=0.09  Score=44.15  Aligned_cols=55  Identities=22%  Similarity=0.320  Sum_probs=38.0

Q ss_pred             cceEEEEccCccchHHHH--HHHhhCC----CEEEEEeCC--------------------------CCCHhhhccCCCEE
Q 017679          232 GKNAVVIGRSNIVGLPTS--LLLQRHH----ATVSIVHAL--------------------------TKNPEQITSEADIV  279 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla--~lL~~~g----AtVti~h~~--------------------------t~~L~~~~~~ADIV  279 (368)
                      .-||+|||+|.+ |.+.+  .+|....    .++.++...                          +.+.++.++.||+|
T Consensus         3 ~~KI~iIGaGsv-~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGGGST-FTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV   81 (167)
T ss_dssp             CEEEEEECTTSS-SHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred             CceEEEECCChh-hhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEE
Confidence            457999998774 76533  3333322    367777543                          24778999999999


Q ss_pred             EEecCCCC
Q 017679          280 IAAAGVAN  287 (368)
Q Consensus       280 IsAvG~p~  287 (368)
                      |+++|.+.
T Consensus        82 vitag~~~   89 (167)
T d1u8xx1          82 MAHIRVGK   89 (167)
T ss_dssp             EECCCTTH
T ss_pred             EECCCcCC
Confidence            99998754

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.35  E-value=0.043  Score=47.15  Aligned_cols=76  Identities=22%  Similarity=0.286  Sum_probs=57.2

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC---CCccc--
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV---ANLVR--  290 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~---p~~I~--  290 (368)
                      |++|+|.|||.|.- |++=|+.|...|.+|+|--|..              .+..+.++.||||...++-   +.+..  
T Consensus        14 ik~k~IaViGYGsQ-G~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~~eA~~~aDiim~L~PD~~q~~vy~~~   92 (182)
T d1np3a2          14 IQGKKVAIIGYGSQ-GHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEE   92 (182)
T ss_dssp             HHTSCEEEECCSHH-HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred             HCCCEEEEEeeCcH-hHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccHHHHhhhcCeeeeecchHHHHHHHHHh
Confidence            57999999999987 9999999999999999998764              2577999999999988862   22221  


Q ss_pred             -CCCcCCCc-EEEEeecC
Q 017679          291 -GSWLKPGA-VVLDVGTC  306 (368)
Q Consensus       291 -~e~ik~ga-vVIDvg~n  306 (368)
                       ...+++|+ +.+-=|+|
T Consensus        93 I~p~lk~g~~L~FaHGfn  110 (182)
T d1np3a2          93 IEPNLKKGATLAFAHGFS  110 (182)
T ss_dssp             TGGGCCTTCEEEESCCHH
T ss_pred             hhhhcCCCcEEEEeccce
Confidence             23567775 44444444

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.30  E-value=0.076  Score=46.12  Aligned_cols=53  Identities=21%  Similarity=0.255  Sum_probs=40.9

Q ss_pred             CCCCccceEEEEccCccchHHHHHHHhh--------------------CCC-EEEEEeCCC--------CCHhhhccCCC
Q 017679          227 GVEIMGKNAVVIGRSNIVGLPTSLLLQR--------------------HHA-TVSIVHALT--------KNPEQITSEAD  277 (368)
Q Consensus       227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~--------------------~gA-tVti~h~~t--------~~L~~~~~~AD  277 (368)
                      ..+++||+|+|||.|++ +.=+|..|++                    .|+ +|+++-|+.        +++.+.....+
T Consensus        34 ~~~~~gk~VvVIGgGNV-AlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~~~~~ft~~Elre~~~~~~  112 (225)
T d1cjca1          34 APDLSCDTAVILGQGNV-ALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPG  112 (225)
T ss_dssp             CCCTTSSEEEEESCSHH-HHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTT
T ss_pred             CccccCceEEEECCchh-HHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcChHhCCCCchhhhcccccCC
Confidence            35688999999998875 9999999987                    476 899998875        34666666666


Q ss_pred             EEE
Q 017679          278 IVI  280 (368)
Q Consensus       278 IVI  280 (368)
                      +-+
T Consensus       113 ~~~  115 (225)
T d1cjca1         113 TRP  115 (225)
T ss_dssp             EEE
T ss_pred             Ccc
Confidence            544

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.20  E-value=0.07  Score=43.94  Aligned_cols=54  Identities=20%  Similarity=0.232  Sum_probs=44.2

Q ss_pred             CccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEec
Q 017679          230 IMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       230 l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      |+|++++.||-+ +-|-+.++.++...|+++++|+-.                         +.++++.++.||+|.+-.
T Consensus         1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~~aDviyt~~   80 (161)
T d1vlva2           1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV   80 (161)
T ss_dssp             STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEEEecHHHhhhhhhheeccc
Confidence            689999999953 457999999999999999999642                         246788999999998754

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.20  E-value=0.049  Score=44.60  Aligned_cols=87  Identities=14%  Similarity=0.136  Sum_probs=57.1

Q ss_pred             ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------
Q 017679          210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------  267 (368)
Q Consensus       210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------  267 (368)
                      ..++|.-.-.+..|.+.+---.|.+|+|.|.|++ |...++++...|+ +|+++.+...                     
T Consensus         7 a~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGv-G~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~   85 (176)
T d2fzwa2           7 CLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGV-GLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK   85 (176)
T ss_dssp             GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSS
T ss_pred             hHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhH-HHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhh
Confidence            3467866666666654433347999999999985 9999988888996 5666644321                     


Q ss_pred             CHhhhc-----cCCCEEEEecCCCCccc--CCCcCCC
Q 017679          268 NPEQIT-----SEADIVIAAAGVANLVR--GSWLKPG  297 (368)
Q Consensus       268 ~L~~~~-----~~ADIVIsAvG~p~~I~--~e~ik~g  297 (368)
                      +..+.+     .-+|+||.++|.+..+.  .+++++|
T Consensus        86 ~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g  122 (176)
T d2fzwa2          86 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG  122 (176)
T ss_dssp             CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred             HHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC
Confidence            121211     34799999998776542  3456665

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.12  E-value=0.06  Score=47.89  Aligned_cols=48  Identities=23%  Similarity=0.311  Sum_probs=37.0

Q ss_pred             CCHHHHH----HHHHHhCCC-CccceEEEEccCccchHHHHHHHhh-CCCEEEEE
Q 017679          214 CTPKGCI----ELLIRSGVE-IMGKNAVVIGRSNIVGLPTSLLLQR-HHATVSIV  262 (368)
Q Consensus       214 cTa~gv~----~lL~~~~i~-l~GK~VvVIG~g~~VGrpla~lL~~-~gAtVti~  262 (368)
                      +|.+|+.    +.+++.+.+ |+||+|+|-|.|+ ||..++.+|.+ .|+.|..+
T Consensus         9 ATg~Gv~~~~~~~~~~~g~~~l~g~~v~IqGfGn-VG~~~a~~L~~~~G~kvv~v   62 (239)
T d1gtma1           9 ATARGASYTIREAAKVLGWDTLKGKTIAIQGYGN-AGYYLAKIMSEDFGMKVVAV   62 (239)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSH-HHHHHHHHHHHTTCCEEEEE
T ss_pred             hhhHHHHHHHHHHHHHhCCCCcCCCEEEEECCCH-HHHHHHHHHHHhcCcceeec
Confidence            4777766    455667765 9999999999988 59999999875 58865443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.11  E-value=0.04  Score=47.01  Aligned_cols=34  Identities=24%  Similarity=0.335  Sum_probs=30.5

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..+||+|||+|-+ |..+|..|.++|.+|+|+.+.
T Consensus         3 ~~~kV~IiGaG~a-Gl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGGSIS-GLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECcCHH-HHHHHHHHHHCCCCEEEEeCC
Confidence            4579999998876 999999999999999999864

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.10  E-value=0.037  Score=46.62  Aligned_cols=52  Identities=31%  Similarity=0.406  Sum_probs=38.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------CCHhhhccCCCEEEE
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQITSEADIVIA  281 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------~~L~~~~~~ADIVIs  281 (368)
                      +|.|||.|- ||.|+|..|+ +|.+|+...-..                                .+......++|+++.
T Consensus         2 kI~ViGlG~-vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~ii~v   79 (196)
T d1dlja2           2 KIAVAGSGY-VGLSLGVLLS-LQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII   79 (196)
T ss_dssp             EEEEECCSH-HHHHHHHHHT-TTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred             EEEEECCCh-hHHHHHHHHH-CCCcEEEEECCHHHHHHHhhcccccchhhHHHHhhhhhhhhhccchhhhhhhccccccc
Confidence            689999876 6999998775 699999886431                                122344678999999


Q ss_pred             ecCCCC
Q 017679          282 AAGVAN  287 (368)
Q Consensus       282 AvG~p~  287 (368)
                      +++.|.
T Consensus        80 ~vpt~~   85 (196)
T d1dlja2          80 ATPTNY   85 (196)
T ss_dssp             CCCCCE
T ss_pred             cCCccc
Confidence            998763

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=93.05  E-value=0.044  Score=43.64  Aligned_cols=37  Identities=22%  Similarity=0.340  Sum_probs=33.0

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .+||+|+|||.|+. +.--|.+|.+...+||++||..+
T Consensus        25 ~~~k~V~VvGgGds-A~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          25 YRNQKVAVIGGGNT-AVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             GTTSEEEEECSSHH-HHHHHHHHTTTSSEEEEECSSSS
T ss_pred             hCCCEEEEECCCHH-HHHHHHHHhhcCCcEEEEeeccc
Confidence            48999999999988 88889999988889999999863

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.94  E-value=0.057  Score=44.50  Aligned_cols=37  Identities=16%  Similarity=0.169  Sum_probs=31.4

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t  266 (368)
                      +..+++|+|||.|.+ |.=.|..|.+.|| +|++++++.
T Consensus        42 p~~~~kVvVIGGGdt-A~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          42 PSIRGAVIVLGAGDT-AFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCCSEEEEECSSHH-HHHHHHHHHHTTCSEEEEECSSC
T ss_pred             ccCCCEEEEECCChh-HHHHHHHHHHcCCcceeEEEeCC
Confidence            345788999998886 9999999999997 699998875

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.87  E-value=0.031  Score=45.33  Aligned_cols=33  Identities=18%  Similarity=0.103  Sum_probs=29.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      -.|+|||+|-. |..+|..|+++|.+|+|+.++.
T Consensus         6 yDviViGaG~~-Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           6 YDVIVLGTGIT-ECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEECcCHH-HHHHHHHHHHCCCCEEEEcCCC
Confidence            35899998876 9999999999999999998753

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.76  E-value=0.032  Score=51.06  Aligned_cols=32  Identities=19%  Similarity=0.120  Sum_probs=29.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      |.|+|.|++|.+|..++..|+++|.+|+.+.+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r   33 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKR   33 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            77889999999999999999999999998876

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.74  E-value=0.034  Score=44.98  Aligned_cols=32  Identities=19%  Similarity=0.295  Sum_probs=28.0

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT  266 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t  266 (368)
                      +|+|||+|-+ |..+|..|.++|. +|+|+.+..
T Consensus         2 ~V~IIGaG~a-GL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMS-GISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHH-HHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHH-HHHHHHHHHhCCCCcEEEEECCC
Confidence            5999998877 9999999999995 799997653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.71  E-value=0.051  Score=48.11  Aligned_cols=33  Identities=24%  Similarity=0.145  Sum_probs=30.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      |+|+|.|++|-+|+.++..|+++|++|+.+.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~   33 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR   33 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECC
Confidence            799999999999999999999999999988764

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=92.68  E-value=0.042  Score=46.17  Aligned_cols=37  Identities=22%  Similarity=0.372  Sum_probs=32.0

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+++||+|+|||.|.. |-=+|..|+..++.++.+.+.
T Consensus        28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCCcc-HHHHHHHHHhhhccccccccc
Confidence            5789999999999998 999999999999877666554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.64  E-value=0.092  Score=41.04  Aligned_cols=36  Identities=28%  Similarity=0.326  Sum_probs=31.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      -..|+++|||+|-+ |.-+|..|.+.|+.||++++..
T Consensus        20 ~~p~~i~IiG~G~i-g~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIGAGVI-GLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCeEEEECCChH-HHHHHHHHHHcCCceEEEEeec
Confidence            35689999998765 9999999999999999999765

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.61  E-value=0.069  Score=48.11  Aligned_cols=31  Identities=26%  Similarity=0.348  Sum_probs=28.8

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      ||+|+|++|-+|+.++..|+++|.+|+++.+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            6999999999999999999999999998853

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=92.58  E-value=0.045  Score=47.39  Aligned_cols=35  Identities=14%  Similarity=0.192  Sum_probs=31.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++||+|.|+++-+|+.++..|+++|++|.++.+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~   36 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA   36 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            56799999999999999999999999999998763

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.54  E-value=0.034  Score=43.96  Aligned_cols=35  Identities=29%  Similarity=0.405  Sum_probs=31.2

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..|+++|||.|- +|.-+|..|.+.|++||++++..
T Consensus        24 ~p~~~viiG~G~-iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          24 IPKKLVVIGAGY-IGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CCSEEEESCCSH-HHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEccch-HHHHHHHHHHhcCCeEEEEEEcc
Confidence            358999999776 59999999999999999999865

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.48  E-value=0.065  Score=49.26  Aligned_cols=48  Identities=27%  Similarity=0.232  Sum_probs=38.2

Q ss_pred             CCHHHHHHHHHHh------------CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEE
Q 017679          214 CTPKGCIELLIRS------------GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV  262 (368)
Q Consensus       214 cTa~gv~~lL~~~------------~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~  262 (368)
                      +|.+|+...++..            +.+|+||+|+|=|.|+ ||..+|..|.+.||+|+.+
T Consensus         6 ATG~GV~~~~~~~l~~~~~~~~~gl~~~L~gktvaIqGfGn-VG~~~A~~L~e~Gakvv~v   65 (293)
T d1hwxa1           6 ATGRGVFHGIENFIENASYMSILGMTPGFGDKTFAVQGFGN-VGLHSMRYLHRFGAKCVAV   65 (293)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHTCCSSSTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEE
T ss_pred             HhHHHHHHHHHHHHHhcccchhccCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence            4667776666532            2479999999999987 5999999999999986554

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.38  E-value=0.038  Score=46.38  Aligned_cols=31  Identities=19%  Similarity=0.306  Sum_probs=28.4

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +|+|||+|-. |..+|..|+++|.+|+++.+.
T Consensus         2 ~V~IIGaG~a-GL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGIS-GLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECCBHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECCCHH-HHHHHHHHHhCCCCEEEEecC
Confidence            6999999877 999999999999999999764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.28  E-value=0.049  Score=50.08  Aligned_cols=32  Identities=34%  Similarity=0.537  Sum_probs=29.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      ||+|+|.|++|.+|..++..|+++|.+|+++.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            89999999999999999999999999999884

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=92.24  E-value=0.034  Score=46.12  Aligned_cols=35  Identities=9%  Similarity=0.267  Sum_probs=31.1

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -++++|+|||.|.+ |...|..|.+.|++|+++++.
T Consensus         3 ~k~~dVvIIGGGpa-Gl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           3 TKHSKLLILGSGPA-GYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEEECCSHH-HHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCCcEEEECCCHH-HHHHHHHHHHcCCceEEEEee
Confidence            36789999999887 999999999999999999753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.24  E-value=0.064  Score=46.11  Aligned_cols=35  Identities=14%  Similarity=0.202  Sum_probs=31.8

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -.+|+|+|||+|-+ |...|..|.++|.+|+++...
T Consensus        47 ~~~k~VvIIGaGpA-Gl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVGAGPS-GSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEcccHH-HHHHHHHHHHhccceeeEeec
Confidence            47899999999887 999999999999999999754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.19  E-value=0.067  Score=47.56  Aligned_cols=33  Identities=18%  Similarity=0.033  Sum_probs=30.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      |+++|.|++|.+|+.++..|+++|.+|+.+.+.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            789999999999999999999999999988763

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=92.12  E-value=0.042  Score=48.55  Aligned_cols=31  Identities=6%  Similarity=0.166  Sum_probs=28.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      .||+|.|++|.+|+.++..|+++|.+|+.++
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~~V~~id   31 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGIDLIVFD   31 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            3799999999999999999999999999885

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.03  E-value=0.065  Score=48.37  Aligned_cols=36  Identities=14%  Similarity=0.020  Sum_probs=32.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +-|+|+|+|++|.+|+.++..|+++|.+|++..|..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~   37 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSL   37 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCc
Confidence            358999999999999999999999999999998764

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.83  E-value=0.15  Score=42.49  Aligned_cols=53  Identities=21%  Similarity=0.182  Sum_probs=35.9

Q ss_pred             eEEEEccCccch--HHHHHHHhhCC----CEEEEEeCC----------------------------CCCHhhhccCCCEE
Q 017679          234 NAVVIGRSNIVG--LPTSLLLQRHH----ATVSIVHAL----------------------------TKNPEQITSEADIV  279 (368)
Q Consensus       234 ~VvVIG~g~~VG--rpla~lL~~~g----AtVti~h~~----------------------------t~~L~~~~~~ADIV  279 (368)
                      |++|||+|.. |  ..++.+++...    .++.+...+                            +.+..+.++.||+|
T Consensus         3 KI~iIGaGs~-~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvV   81 (169)
T d1s6ya1           3 KIATIGGGSS-YTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV   81 (169)
T ss_dssp             EEEEETTTCT-THHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             EEEEECCChh-hHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEE
Confidence            7899998753 5  34444555432    267776532                            23567888999999


Q ss_pred             EEecCCCC
Q 017679          280 IAAAGVAN  287 (368)
Q Consensus       280 IsAvG~p~  287 (368)
                      |+++|.+.
T Consensus        82 v~ta~~~~   89 (169)
T d1s6ya1          82 TTQFRVGG   89 (169)
T ss_dssp             EECCCTTH
T ss_pred             EEccccCC
Confidence            99998764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.61  E-value=0.11  Score=46.84  Aligned_cols=31  Identities=19%  Similarity=0.230  Sum_probs=28.9

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      |.|+|.|++|.+|+.++..|+++|.+|+++.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d   32 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVAD   32 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEE
Confidence            6788999999999999999999999999884

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=91.59  E-value=0.19  Score=40.99  Aligned_cols=97  Identities=15%  Similarity=0.156  Sum_probs=59.4

Q ss_pred             ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCCC--------------------
Q 017679          210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTKN--------------------  268 (368)
Q Consensus       210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~~--------------------  268 (368)
                      ..++|...-....+.+..---.|.+|+|+|.|+. |-..+..+...++ .|+++.++...                    
T Consensus         7 a~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~-g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~   85 (175)
T d1cdoa2           7 CLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAV-GLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSE   85 (175)
T ss_dssp             GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSS
T ss_pred             HHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCc-cchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcch
Confidence            3567866656666654443457899999999986 6667777777776 67777654311                    


Q ss_pred             -Hhhhc-----cCCCEEEEecCCCCccc--CCCcCC-CcEEEEeecCC
Q 017679          269 -PEQIT-----SEADIVIAAAGVANLVR--GSWLKP-GAVVLDVGTCP  307 (368)
Q Consensus       269 -L~~~~-----~~ADIVIsAvG~p~~I~--~e~ik~-gavVIDvg~n~  307 (368)
                       ..+..     .-+|++|-++|.+..+.  ..+.++ +.+++=+|...
T Consensus        86 ~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~  133 (175)
T d1cdoa2          86 PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD  133 (175)
T ss_dssp             CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS
T ss_pred             hHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC
Confidence             11111     34789998888765432  234444 35555555543

>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.53  E-value=0.097  Score=43.34  Aligned_cols=55  Identities=13%  Similarity=0.188  Sum_probs=46.0

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEec
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      +|+|++|++||-+..|-..++.++...|++++++.-.                         +.++.+.++.||+|.+.+
T Consensus         1 sl~gl~I~~vGD~~nV~~Sli~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~advi~~~~   80 (170)
T d1otha2           1 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT   80 (170)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCCCEEEEEcCchhHHHHHHHHHHHcCCEEEEEeccccCCchHHHHHHHHHHhccCCEEEEEcCHHHHHhhhhheeeec
Confidence            4789999999988888888888888889999998643                         246778899999999765

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.53  E-value=0.064  Score=42.30  Aligned_cols=34  Identities=18%  Similarity=0.209  Sum_probs=30.0

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..++++|||+|-+ |.-+|..|.+.|++||++.+.
T Consensus        19 ~P~~vvIIGgG~i-G~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYV-ALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECCCcc-HHHHHHHHhhcCCeEEEEEec
Confidence            4579999998765 999999999999999999764

>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Pyrococcus abyssi [TaxId: 29292]

Probab=91.51  E-value=0.11  Score=42.35  Aligned_cols=54  Identities=13%  Similarity=0.121  Sum_probs=44.3

Q ss_pred             CccceEEEEccC--ccchHHHHHHHhhCCCEEEEEeCC---------------------CCCHhhhccCCCEEEEec
Q 017679          230 IMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL---------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       230 l~GK~VvVIG~g--~~VGrpla~lL~~~gAtVti~h~~---------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      |+|++|++||-.  +-|.+.++.+|...|+++++++-.                     +.++.+.+++||+|.+-.
T Consensus         2 l~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~av~~aDvvy~~~   78 (157)
T d1ml4a2           2 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTR   78 (157)
T ss_dssp             SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECC
T ss_pred             cCCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEccchhhcchHHHHHHHhhcccceeecCHHHhhccCcEEEeec
Confidence            789999999984  346899999999999999998643                     247788999999988654

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.47  E-value=0.15  Score=43.01  Aligned_cols=55  Identities=18%  Similarity=0.232  Sum_probs=45.6

Q ss_pred             CCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEe
Q 017679          229 EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       229 ~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsA  282 (368)
                      +|+|.+|+.||-+ +.|.+.++.++...|+++++|+-.                         +.++.+.++.||+|.+-
T Consensus         2 ~l~~lkia~vGD~~nnV~~Sli~~~~~~G~~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvVyt~   81 (185)
T d1dxha2           2 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD   81 (185)
T ss_dssp             CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHHHcCCEEEEEccHHHHhhhHHHHHHHHHhhccCCeEEEEeChhhccccccEEEee
Confidence            5789999999965 568999999999999999999632                         34678889999998865


Q ss_pred             c
Q 017679          283 A  283 (368)
Q Consensus       283 v  283 (368)
                      +
T Consensus        82 ~   82 (185)
T d1dxha2          82 V   82 (185)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=91.47  E-value=0.14  Score=41.96  Aligned_cols=95  Identities=16%  Similarity=0.159  Sum_probs=60.7

Q ss_pred             ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC---------------------
Q 017679          210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------  267 (368)
Q Consensus       210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~---------------------  267 (368)
                      ..++|...-.+..+.+.+---.|.+|+|+|+|+. |...++++...|+ +|.++.+...                     
T Consensus         7 a~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~-G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~   85 (176)
T d2jhfa2           7 CLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGV-GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK   85 (176)
T ss_dssp             GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSS
T ss_pred             hHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCc-HHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchh
Confidence            3567866555555544444457999999999985 8888888888885 7777765421                     


Q ss_pred             CHhhhc-----cCCCEEEEecCCCCccc--CCCcCCC-cEEEEeec
Q 017679          268 NPEQIT-----SEADIVIAAAGVANLVR--GSWLKPG-AVVLDVGT  305 (368)
Q Consensus       268 ~L~~~~-----~~ADIVIsAvG~p~~I~--~e~ik~g-avVIDvg~  305 (368)
                      ...+..     ..+|++|-++|.+..+.  .++++.+ -+++=.+.
T Consensus        86 ~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~  131 (176)
T d2jhfa2          86 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGV  131 (176)
T ss_dssp             CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSC
T ss_pred             HHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecC
Confidence            111111     34799999999876543  3456554 34433343

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.31  E-value=0.08  Score=42.72  Aligned_cols=29  Identities=24%  Similarity=0.492  Sum_probs=25.2

Q ss_pred             CCccceEEEEccCccchHHHHHHHhhCCCE
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHAT  258 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAt  258 (368)
                      ...||+|+|||.|.+ |.-+|..|.+.|+.
T Consensus        26 ~~~gkrVvVIGgG~~-g~d~a~~~~r~G~~   54 (162)
T d1ps9a2          26 APVGNKVAIIGCGGI-GFDTAMYLSQPGES   54 (162)
T ss_dssp             CCCCSEEEEECCHHH-HHHHHHHHTCCSSC
T ss_pred             cccCCceEEEcCchh-HHHHHHHHHHcCCc
Confidence            356999999997765 99999999999975

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.21  E-value=0.099  Score=42.01  Aligned_cols=37  Identities=22%  Similarity=0.301  Sum_probs=32.2

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK  267 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~  267 (368)
                      .+||+|+|||.|+. +---|..|.+.-.+||++|+..+
T Consensus        32 frgk~V~VvGgGds-A~e~A~~L~~~a~~V~li~r~~~   68 (130)
T d1vdca2          32 FRNKPLAVIGGGDS-AMEEANFLTKYGSKVYIIHRRDA   68 (130)
T ss_dssp             GTTSEEEEECCSHH-HHHHHHHHTTTSSEEEEECSSSS
T ss_pred             hCCCEEEEEcCchH-HHHHHHHHhCCCCcEEEEEeccc
Confidence            58999999999988 77778888888889999999763

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.19  E-value=0.086  Score=46.14  Aligned_cols=32  Identities=19%  Similarity=0.158  Sum_probs=26.0

Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++|.|+|.-+|+.+|..|+++|++|.++.++.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~   36 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   36 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence            34558776679999999999999999986653

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=91.17  E-value=0.15  Score=41.63  Aligned_cols=53  Identities=17%  Similarity=0.243  Sum_probs=40.3

Q ss_pred             CccceEEEEccCcc--chHHHHHHHhhCCCEEEEE-eCC------------------CCCHhhhccCCCEEEEe
Q 017679          230 IMGKNAVVIGRSNI--VGLPTSLLLQRHHATVSIV-HAL------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       230 l~GK~VvVIG~g~~--VGrpla~lL~~~gAtVti~-h~~------------------t~~L~~~~~~ADIVIsA  282 (368)
                      |+|++|++||-+..  |.+.++.+|...|++++++ ...                  +.++.+.+++||+|.+.
T Consensus         1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvvy~~   74 (153)
T d1pg5a2           1 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVT   74 (153)
T ss_dssp             STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEE
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEecccccccchhhcccCCCeEEEEeCHHHHhhcCCeEEEe
Confidence            57999999998765  7889999999999875544 311                  13677889999988743

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=90.95  E-value=0.079  Score=46.41  Aligned_cols=33  Identities=15%  Similarity=0.250  Sum_probs=26.5

Q ss_pred             ceEE-EEccCccchHHHHHHHhhCCCE-------EEEEeCC
Q 017679          233 KNAV-VIGRSNIVGLPTSLLLQRHHAT-------VSIVHAL  265 (368)
Q Consensus       233 K~Vv-VIG~g~~VGrpla~lL~~~gAt-------Vti~h~~  265 (368)
                      |+|+ |.|+|.-+|+.+|..|+++|++       |.++.++
T Consensus         1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~   41 (240)
T d2bd0a1           1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT   41 (240)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC
Confidence            6755 5588777799999999999986       7777765

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=90.92  E-value=0.1  Score=45.98  Aligned_cols=54  Identities=15%  Similarity=0.185  Sum_probs=40.1

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------CHhhhc--cCCCEEEEecCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------NPEQIT--SEADIVIAAAGV  285 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------~L~~~~--~~ADIVIsAvG~  285 (368)
                      -|+|+|.|++|-+|+.++..|+++|..|.++....+       .+.+.+  .+.|.|+.+++.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~   64 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAK   64 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEcchh
Confidence            379999999999999999999999998877644321       223333  346889977653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=90.87  E-value=0.041  Score=47.60  Aligned_cols=52  Identities=15%  Similarity=0.243  Sum_probs=37.7

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---C------Hhhhcc--CCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---N------PEQITS--EADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---~------L~~~~~--~ADIVIsAvG~  285 (368)
                      ||+|.|++|.||+.++..|.++|..|.+..+...   |      +.+.++  +.|+||.++|.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            6999999999999999999998865555443321   2      234444  45999987763

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=90.76  E-value=0.078  Score=46.22  Aligned_cols=35  Identities=11%  Similarity=0.274  Sum_probs=31.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      |++++|+|||.|++ |-+++..|.+.|. ++++++..
T Consensus        28 L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          28 LKDSRVLIVGLGGL-GCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCC
T ss_pred             HhCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEECCc
Confidence            68899999999996 9999999999996 89998654

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=90.61  E-value=0.12  Score=40.99  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+||+|+|||.|+. +.--|..|.+....||++|+..
T Consensus        28 ~~gk~V~VvGgG~s-A~~~A~~L~~~a~~V~li~r~~   63 (126)
T d1fl2a2          28 FKGKRVAVIGGGNS-GVEAAIDLAGIVEHVTLLEFAP   63 (126)
T ss_dssp             GBTCEEEEECCSHH-HHHHHHHHHTTBSEEEEECSSS
T ss_pred             cCCceEEEEeCCHH-HHHHHHhhhccCCceEEEeccc
Confidence            58999999999887 7777888888877999999875

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.55  E-value=0.11  Score=43.99  Aligned_cols=32  Identities=19%  Similarity=0.347  Sum_probs=28.3

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT  266 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t  266 (368)
                      +|+|||+|-+ |..+|.+|.+.|. .|+|+.+..
T Consensus         3 ~V~IvGaG~a-Gl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIG-GLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHH-HHHHHHHHHhCCCCeEEEEeCCC
Confidence            7999998876 9999999999995 999998754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.50  E-value=0.11  Score=46.78  Aligned_cols=32  Identities=25%  Similarity=0.348  Sum_probs=28.0

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~  265 (368)
                      |+|+|||+|-. |..+|..|+++|.  +|++..++
T Consensus         5 KrVaIIGaG~s-Gl~~A~~L~~~~~~~~v~vfEk~   38 (335)
T d2gv8a1           5 RKIAIIGAGPS-GLVTAKALLAEKAFDQVTLFERR   38 (335)
T ss_dssp             CEEEEECCSHH-HHHHHHHHHTTTCCSEEEEECSS
T ss_pred             CeEEEECcCHH-HHHHHHHHHHhCCCCCEEEEECC
Confidence            79999999887 9999999988774  89999776

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.25  E-value=0.094  Score=45.12  Aligned_cols=31  Identities=23%  Similarity=0.378  Sum_probs=27.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+|||+|- +|..+|..|+++|.+|+++.+.
T Consensus         6 DvvIIGaGi-~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           6 EAVVIGGGI-IGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCH-HHHHHHHHHHHCCCcEEEEeCC
Confidence            599999775 5999999999999999999875

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.25  E-value=0.15  Score=43.10  Aligned_cols=31  Identities=29%  Similarity=0.389  Sum_probs=26.6

Q ss_pred             eEEEEccCccchHHHHHHHhhC--CCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRH--HATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~  265 (368)
                      +|+|||+|-+ |..+|..|.+.  |++|+++.+.
T Consensus         3 kv~iIGaGpa-Gl~aA~~L~~~~~~~~V~v~e~~   35 (230)
T d1cjca2           3 QICVVGSGPA-GFYTAQHLLKHHSRAHVDIYEKQ   35 (230)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHHCSSCEEEEECSS
T ss_pred             eEEEECccHH-HHHHHHHHHhcCCCCeEEEEeCC
Confidence            8999999988 99999988654  7899999754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.21  E-value=0.16  Score=40.15  Aligned_cols=36  Identities=14%  Similarity=0.282  Sum_probs=31.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      -..|+++|||.|- +|.-+|..|.+.|..||++++..
T Consensus        24 ~~p~~vvIiGgG~-IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGI-IGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSH-HHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECCCH-HHHHHHHHhhcCCCEEEEEEeec
Confidence            3468999999775 59999999999999999998865

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=90.00  E-value=0.31  Score=40.51  Aligned_cols=55  Identities=25%  Similarity=0.285  Sum_probs=38.5

Q ss_pred             ceEEEEccCccchHHHHH---HHhhC---CCEEEEEeCC--------------------------CCCHhhhccCCCEEE
Q 017679          233 KNAVVIGRSNIVGLPTSL---LLQRH---HATVSIVHAL--------------------------TKNPEQITSEADIVI  280 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~---lL~~~---gAtVti~h~~--------------------------t~~L~~~~~~ADIVI  280 (368)
                      -|+.|||+|.+ |.+.+.   ++...   +.++..+...                          +.|+++.++.||+||
T Consensus         3 mKI~iIGaGsv-g~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv   81 (171)
T d1obba1           3 VKIGIIGAGSA-VFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI   81 (171)
T ss_dssp             CEEEEETTTCH-HHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred             cEEEEECCCHH-HhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEe
Confidence            48999998764 866433   33222   2488888654                          247788999999999


Q ss_pred             EecCCCCc
Q 017679          281 AAAGVANL  288 (368)
Q Consensus       281 sAvG~p~~  288 (368)
                      ++++.+.+
T Consensus        82 ~~~~~g~~   89 (171)
T d1obba1          82 NTAMVGGH   89 (171)
T ss_dssp             ECCCTTHH
T ss_pred             eecccccc
Confidence            99887643

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.97  E-value=0.093  Score=45.40  Aligned_cols=32  Identities=25%  Similarity=0.391  Sum_probs=28.4

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+|||+|-. |...|..|+++|.+|+|+.+..
T Consensus         1 DViVIGaG~a-GL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           1 DVVVVGGGIS-GMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             SEEEECCBHH-HHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECCCHH-HHHHHHHHHhCCCCEEEEecCC
Confidence            4899998876 9999999999999999997643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.94  E-value=0.094  Score=42.34  Aligned_cols=32  Identities=19%  Similarity=0.216  Sum_probs=26.8

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      ++++|+|||.|.+ |.-+|..|.+.|++|+++.
T Consensus         2 ~~~~VvIIGgG~~-G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGTGLA-GVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECCSHH-HHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECCcHH-HHHHHHHHHHcCCceEEEE
Confidence            4789999998876 9999999999998666553

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.92  E-value=0.045  Score=48.59  Aligned_cols=35  Identities=20%  Similarity=0.220  Sum_probs=28.7

Q ss_pred             ccceEEEE-ccCccchHHHHHHHhhC-CCEEEEEeCC
Q 017679          231 MGKNAVVI-GRSNIVGLPTSLLLQRH-HATVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVI-G~g~~VGrpla~lL~~~-gAtVti~h~~  265 (368)
                      +||+|+|| |++.=+|+.+|..|+++ |++|.++.|+
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~   37 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD   37 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC
Confidence            58999766 65555699999999875 8999999886

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.73  E-value=0.12  Score=46.34  Aligned_cols=31  Identities=19%  Similarity=0.251  Sum_probs=29.3

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVH  263 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h  263 (368)
                      |||+|.|++|-+|..++..|+++|.+|+++.
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            7999999999999999999999999999874

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.52  E-value=0.14  Score=45.61  Aligned_cols=33  Identities=15%  Similarity=0.096  Sum_probs=29.9

Q ss_pred             ceE-EEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNA-VVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~V-vVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ||| +|.|++|-+|..++..|+++|++|+.+.+.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            688 899999999999999999999999988663

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.45  E-value=0.12  Score=43.20  Aligned_cols=32  Identities=13%  Similarity=0.195  Sum_probs=28.1

Q ss_pred             ceEEEEccCccchHHHHHHHhhCC-------CEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~g-------AtVti~h~~  265 (368)
                      ++|+|||+|-+ |..+|..|.++|       ..|++..+.
T Consensus         3 ~~VaVIGaGpa-GL~aA~~L~~~G~~~~~~~~~V~v~E~~   41 (239)
T d1lqta2           3 YYIAIVGSGPS-AFFAAASLLKAADTTEDLDMAVDMLEML   41 (239)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHHHHHHSTTCCEEEEEEESS
T ss_pred             cEEEEECcCHH-HHHHHHHHHHcCCccccCCCceEEEecC
Confidence            58999999988 999999999887       589999764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=89.26  E-value=0.16  Score=44.23  Aligned_cols=35  Identities=17%  Similarity=0.127  Sum_probs=29.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHAL  265 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~  265 (368)
                      +.|+|+|.|++.-+|+.+|..|+++|+  .|..+.|+
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~   38 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD   38 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCC
Confidence            468999999988889999999999997  57766665

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=89.26  E-value=0.15  Score=41.84  Aligned_cols=54  Identities=17%  Similarity=0.177  Sum_probs=43.1

Q ss_pred             CccceEEEEcc--CccchHHHHHHHhhCCCEEEEEeCC-----------CCCHhhhccCCCEEEEec
Q 017679          230 IMGKNAVVIGR--SNIVGLPTSLLLQRHHATVSIVHAL-----------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       230 l~GK~VvVIG~--g~~VGrpla~lL~~~gAtVti~h~~-----------t~~L~~~~~~ADIVIsAv  283 (368)
                      ++|.++++||-  .+-|.+.++.+|...|+++++|.-.           +.++.+.++.||+|.+..
T Consensus         1 F~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P~~~~~~~~~~~~~~~~~ea~~~aDviy~~r   67 (151)
T d2at2a2           1 FKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLR   67 (151)
T ss_pred             CCCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCCchhhccccceeEEEechhccccCceeeeeE
Confidence            47999999997  3336999999999999998888543           246778999999988654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.94  E-value=0.17  Score=45.29  Aligned_cols=35  Identities=14%  Similarity=0.078  Sum_probs=31.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      .+-|+++|.|++|.+|+.++..|.++|.+|+.+.+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            35689999999999999999999999999998854

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=88.88  E-value=0.29  Score=43.46  Aligned_cols=52  Identities=15%  Similarity=0.204  Sum_probs=40.3

Q ss_pred             eEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC----------------------CH-hhhccCCCEEEEecCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK----------------------NP-EQITSEADIVIAAAGV  285 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~----------------------~L-~~~~~~ADIVIsAvG~  285 (368)
                      ||+|.|++|.+|+.++..|+++| .+|+.+.+.+.                      ++ +...+++|+||-.++.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence            69999999999999999999888 58888754321                      12 2367789999977764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=88.36  E-value=0.23  Score=43.39  Aligned_cols=30  Identities=30%  Similarity=0.303  Sum_probs=25.2

Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      |+|.|++.-+|+.+|..|+++|++|.++.+
T Consensus         4 ~lITGas~GIG~a~a~~la~~Ga~V~i~~~   33 (244)
T d1edoa_           4 VVVTGASRGIGKAIALSLGKAGCKVLVNYA   33 (244)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             EEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            566687777899999999999999988644

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=88.24  E-value=0.25  Score=39.53  Aligned_cols=31  Identities=26%  Similarity=0.426  Sum_probs=27.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++|+|.|.. |+.++..|.++|..|+++...
T Consensus         5 HiII~G~g~~-g~~l~~~L~~~~~~v~vId~d   35 (153)
T d1id1a_           5 HFIVCGHSIL-AINTILQLNQRGQNVTVISNL   35 (153)
T ss_dssp             CEEEECCSHH-HHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEECCCHH-HHHHHHHHHHcCCCEEEEecc
Confidence            6999999886 999999999999988888654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.09  E-value=0.13  Score=42.78  Aligned_cols=33  Identities=6%  Similarity=0.148  Sum_probs=29.6

Q ss_pred             ccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +.++|+|||.|.+ |...|..|.+.|++|+++.+
T Consensus         4 ~~~~VvIIGgGpa-Gl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           4 HNTRLCIVGSGPA-AHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEEEECCSHH-HHHHHHHHHHTTCCCEEECC
T ss_pred             ccceEEEECCCHH-HHHHHHHHHHcCCcEEEEEe
Confidence            5689999999987 99999999999999999864

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.96  E-value=0.14  Score=44.15  Aligned_cols=32  Identities=19%  Similarity=0.267  Sum_probs=28.6

Q ss_pred             EEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ++|.|+|.-+|+.+|..|+++|++|.++.++.
T Consensus         4 AlVTGas~GIG~aia~~la~~G~~Vvi~~r~~   35 (266)
T d1mxha_           4 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHS   35 (266)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            57788888789999999999999999999764

>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Escherichia coli [TaxId: 562]

Probab=87.92  E-value=0.34  Score=40.50  Aligned_cols=55  Identities=15%  Similarity=0.095  Sum_probs=44.2

Q ss_pred             CCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEe
Q 017679          229 EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAA  282 (368)
Q Consensus       229 ~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsA  282 (368)
                      .++|.+++.||-+ +.|...++.++...|+++++|.-.                         +.++.+.++.||+|.+-
T Consensus         2 ~~~~l~i~~vGD~~nnv~~Sli~~~~~~g~~l~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~   81 (183)
T d1duvg2           2 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD   81 (183)
T ss_dssp             CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred             CcCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEEechHhhhhHHHHHHHHHHHHhcCCceEEEechhhccccCCEEEEE
Confidence            4688999999965 557899999998899999998632                         34677899999999865


Q ss_pred             c
Q 017679          283 A  283 (368)
Q Consensus       283 v  283 (368)
                      +
T Consensus        82 ~   82 (183)
T d1duvg2          82 V   82 (183)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.67  E-value=0.67  Score=36.08  Aligned_cols=53  Identities=13%  Similarity=0.134  Sum_probs=40.1

Q ss_pred             ceEEEEccCcc---chHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC
Q 017679          233 KNAVVIGRSNI---VGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       233 K~VvVIG~g~~---VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~  285 (368)
                      |+|+|||+|.-   .|.-+...|++.|.+|+-+|.+.         +++.+.-..-|+++.+++.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi~vp~   66 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPP   66 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEEEeCH
Confidence            78999997743   57778888899999999998764         3566665666888777653

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=87.61  E-value=0.33  Score=40.06  Aligned_cols=94  Identities=14%  Similarity=0.134  Sum_probs=56.8

Q ss_pred             cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC-------------------C--
Q 017679          211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-------------------N--  268 (368)
Q Consensus       211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~-------------------~--  268 (368)
                      .+.|.-.-.+..+.+..---.|.+|+|+|.|++ |...++.+...|+ +|+++.+...                   +  
T Consensus         7 ~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgv-Gl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~   85 (174)
T d1p0fa2           7 LIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGV-GFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKP   85 (174)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSC
T ss_pred             hhhhHHHHHHHHHHHhhCCCCCCEEEEECCCch-hHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhH
Confidence            446644434444433333457999999999875 9999999988997 7877765421                   1  


Q ss_pred             Hhhhc-----cCCCEEEEecCCCCcc--cCCCcCC-CcEEEEeec
Q 017679          269 PEQIT-----SEADIVIAAAGVANLV--RGSWLKP-GAVVLDVGT  305 (368)
Q Consensus       269 L~~~~-----~~ADIVIsAvG~p~~I--~~e~ik~-gavVIDvg~  305 (368)
                      ..+..     ..+|++|-++|.+..+  ....+++ +-.++=+|.
T Consensus        86 ~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~  130 (174)
T d1p0fa2          86 IYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGL  130 (174)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred             HHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEE
Confidence            11111     3478888888876643  2233433 234444554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.34  E-value=0.25  Score=42.75  Aligned_cols=36  Identities=11%  Similarity=0.037  Sum_probs=30.3

Q ss_pred             cceEEEEccCccchHHHHHHHh---hCCCEEEEEeCCCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQ---RHHATVSIVHALTK  267 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~---~~gAtVti~h~~t~  267 (368)
                      -|+|+|.|++.-+|+.+|..|+   ++|++|+++.|+..
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~   40 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE   40 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            3889999998878999998885   57899999988754

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.30  E-value=0.17  Score=44.20  Aligned_cols=32  Identities=22%  Similarity=0.233  Sum_probs=28.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      +++|.|+|.-+|+.+|..|+++|++|.++.+.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~   33 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDES   33 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            57899998888999999999999999998765

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.29  E-value=0.14  Score=44.41  Aligned_cols=32  Identities=25%  Similarity=0.319  Sum_probs=28.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      +|+|||+|- +|..+|..|.+.|..|+|+.+..
T Consensus         4 ~V~IvGaGp-~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGP-SGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECCSH-HHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECcCH-HHHHHHHHHHHCCCCEEEEeCCC
Confidence            799999885 59999999999999999998753

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.02  E-value=0.18  Score=45.08  Aligned_cols=33  Identities=12%  Similarity=0.238  Sum_probs=29.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+++|||+|-+ |..+|..|++.|.+|+|+.++.
T Consensus         2 ~dv~IIGaG~s-Gl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGSGLF-GAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEECCSHH-HHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEECCcHH-HHHHHHHHHhCCCcEEEEECCC
Confidence            47899999887 9999999999999999998754

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.83  E-value=0.19  Score=43.93  Aligned_cols=31  Identities=19%  Similarity=0.196  Sum_probs=27.0

Q ss_pred             eEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      +|+|||+|- +|..+|..|+++|. +|+++.+.
T Consensus         3 dViIIGaGi-~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGI-VGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSH-HHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCH-HHHHHHHHHHHcCCCcEEEEeCC
Confidence            699999875 59999999999995 79999765

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.46  E-value=0.4  Score=38.29  Aligned_cols=37  Identities=19%  Similarity=0.270  Sum_probs=30.2

Q ss_pred             CCccceEEEE--ccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          229 EIMGKNAVVI--GRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVI--G~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      ..-++.++|+  |.| .+|--+|..|+++|++||++.+..
T Consensus        36 ~~~~~~vvi~d~ggg-~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          36 KKIGKRVVILNADTY-FMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             SCCCSEEEEEECCCS-SHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cccCCceEEEecCCC-hHHHHHHHHHHHcCCeEEEEecCC
Confidence            3457788887  655 459999999999999999998764

>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=86.20  E-value=1.2  Score=37.07  Aligned_cols=70  Identities=11%  Similarity=0.087  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhh
Q 017679           87 RSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQ  159 (368)
Q Consensus        87 ~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~  159 (368)
                      .+.++++++.+.++.|++|+..+--+|.|--+.. .+....+++..|+++.  .+..+.+.+|+.+...+-+.
T Consensus        20 ~e~lr~~~~~~~~~~gr~pkVlla~~g~D~Hd~G-~~~va~~l~~~G~eVi--~lg~~~~~e~iv~aa~~~~a   89 (168)
T d7reqa2          20 VEEARELVEEFEQAEGRRPRILLAKMGQDGHDRG-QKVIATAYADLGFDVD--VGPLFQTPEETARQAVEADV   89 (168)
T ss_dssp             HHHHHHHHHHHHHHHSSCCEEEEECBTTCCCCHH-HHHHHHHHHHTTCEEE--ECCTTBCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhhCCCCeEEEEeCCccHHHHH-HHHHHHHHHhCCccee--cCCCcCcHHHHHHHHHccCC
Confidence            3678888888877779999999999997764433 3566789999998775  45667799999998887654

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=86.15  E-value=0.63  Score=40.88  Aligned_cols=72  Identities=21%  Similarity=0.154  Sum_probs=52.6

Q ss_pred             Ccc-ceEEEEccCccchHHHHHHHhh------CCCEEEEEeCCC-C------------------CHhhhccCCCEEEEec
Q 017679          230 IMG-KNAVVIGRSNIVGLPTSLLLQR------HHATVSIVHALT-K------------------NPEQITSEADIVIAAA  283 (368)
Q Consensus       230 l~G-K~VvVIG~g~~VGrpla~lL~~------~gAtVti~h~~t-~------------------~L~~~~~~ADIVIsAv  283 (368)
                      ++| |+|.|||.|.- |++=|+.|..      .|..|+|--|.. +                  +..+.+++||||...+
T Consensus        41 ~kg~KkIaViGYGsQ-G~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLl  119 (226)
T d1qmga2          41 FKGIKQIGVIGWGSQ-APAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLI  119 (226)
T ss_dssp             TTTCSEEEEECCSSH-HHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECS
T ss_pred             hcCCCEEEEEEeccH-HHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEec
Confidence            689 99999999987 9999999998      456788875542 1                  2457889999999988


Q ss_pred             CC---CCccc--CCCcCCCcEEEE
Q 017679          284 GV---ANLVR--GSWLKPGAVVLD  302 (368)
Q Consensus       284 G~---p~~I~--~e~ik~gavVID  302 (368)
                      +-   ++...  ...+++|+.+.-
T Consensus       120 PDe~Q~~vy~~I~p~Lk~G~~L~F  143 (226)
T d1qmga2         120 SDSAQADNYEKVFSHMKPNSILGL  143 (226)
T ss_dssp             CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             chHHHHHHHHHHHHhcCCCceeee
Confidence            72   22221  126788876644

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=86.06  E-value=0.61  Score=41.32  Aligned_cols=48  Identities=29%  Similarity=0.297  Sum_probs=38.2

Q ss_pred             CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------CHhhhccCCCEEE
Q 017679          228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------NPEQITSEADIVI  280 (368)
Q Consensus       228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------~L~~~~~~ADIVI  280 (368)
                      ...+||+|+|||.-     |....+.++++.++|+.++.+       .-++.+.+||+||
T Consensus       118 ~~~~g~kV~vIG~~-----P~v~~l~~~~~~~~VlE~~p~~gd~p~~~~~~lLp~aD~vi  172 (251)
T d2h1qa1         118 NEVKGKKVGVVGHF-----PHLESLLEPICDLSILEWSPEEGDYPLPASEFILPECDYVY  172 (251)
T ss_dssp             TTTTTSEEEEESCC-----TTHHHHHTTTSEEEEEESSCCTTCEEGGGHHHHGGGCSEEE
T ss_pred             cccCCCEEEEEecc-----hhHHHHHhcCCcEEEEeCCCCCCCCCchHHHHhhhcCCEEE
Confidence            34579999999962     666778889999999998753       3457789999988

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=85.98  E-value=0.26  Score=42.45  Aligned_cols=32  Identities=19%  Similarity=0.473  Sum_probs=28.1

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .|+|||+|- +|..+|..|+++|.+|+++.+..
T Consensus         5 DvvIIGaGi-~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVGAGS-MGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEECCSH-HHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEECcCH-HHHHHHHHHHHCCCcEEEEeCCC
Confidence            599999775 59999999999999999997653

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.75  E-value=0.91  Score=36.48  Aligned_cols=55  Identities=16%  Similarity=0.012  Sum_probs=42.8

Q ss_pred             ccceEEEEccCc---cchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC
Q 017679          231 MGKNAVVIGRSN---IVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       231 ~GK~VvVIG~g~---~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~  285 (368)
                      +-|+|+|||+|.   -.|.-++..|.+.|.+|+-+|-+.         +++.+.-..-|+++.+++.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp~   84 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP   84 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEEeCH
Confidence            458999999883   458888889999999999999764         4566666667888877763

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.69  E-value=0.24  Score=41.86  Aligned_cols=31  Identities=23%  Similarity=0.290  Sum_probs=27.7

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+|||+|-+ |..+|..|+++|.+|+++.+.
T Consensus         4 DViIIGaG~a-Gl~aA~~la~~G~~V~liEk~   34 (251)
T d2i0za1           4 DVIVIGGGPS-GLMAAIGAAEEGANVLLLDKG   34 (251)
T ss_dssp             SEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence            5899998865 999999999999999999754

>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Escherichia coli [TaxId: 562]

Probab=85.54  E-value=0.66  Score=37.68  Aligned_cols=54  Identities=11%  Similarity=0.156  Sum_probs=41.1

Q ss_pred             CccceEEEEccCcc--chHHHHHHHhhCC-CEEEEEeCC---------------------CCCHhhhccCCCEEEEec
Q 017679          230 IMGKNAVVIGRSNI--VGLPTSLLLQRHH-ATVSIVHAL---------------------TKNPEQITSEADIVIAAA  283 (368)
Q Consensus       230 l~GK~VvVIG~g~~--VGrpla~lL~~~g-AtVti~h~~---------------------t~~L~~~~~~ADIVIsAv  283 (368)
                      ++|.+|+.||-++.  |.+.++.+|...| ..+++|.-.                     +.++.+.+++||+|.+..
T Consensus         2 l~gl~i~~vGD~~nsrv~~Sli~~l~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~   79 (160)
T d1ekxa2           2 LDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTR   79 (160)
T ss_dssp             SSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCSTTTGGGCSEEEECC
T ss_pred             CCCCEEEEEcCCCccHHHHHHHHHHHHcCCCeEEeeccchhhhhHHHHHHHhhhccccccccCHHHHhCcCceEEeec
Confidence            67999999998665  6888888888886 456676421                     357788899999988654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.49  E-value=0.29  Score=46.77  Aligned_cols=36  Identities=17%  Similarity=0.157  Sum_probs=31.5

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT  266 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t  266 (368)
                      |+++||+|||.|++ |-.++..|...|. ++++++..+
T Consensus        35 l~~~kVlvvG~Ggl-G~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          35 LDTCKVLVIGAGGL-GCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHHCCEEEECSSTT-HHHHHHHHHTTTCCCEEEECCCB
T ss_pred             HhcCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEECCC
Confidence            46789999999996 9999999999996 899997654

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.40  E-value=0.3  Score=39.32  Aligned_cols=31  Identities=10%  Similarity=0.296  Sum_probs=27.9

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .|+|||.|.+ |...|..+.+.|.+|++.+++
T Consensus         3 DViIIGgGpa-Gl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGSGPA-GAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEECCSHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEECcCHH-HHHHHHHHHHcCCeEEEEEEe
Confidence            6899999887 999999999999999999863

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.38  E-value=0.21  Score=44.58  Aligned_cols=30  Identities=27%  Similarity=0.324  Sum_probs=24.2

Q ss_pred             ceEEEE-ccCccchHHHHHHHhhCCCEEEEE
Q 017679          233 KNAVVI-GRSNIVGLPTSLLLQRHHATVSIV  262 (368)
Q Consensus       233 K~VvVI-G~g~~VGrpla~lL~~~gAtVti~  262 (368)
                      |||++| |+|.=+|+.+|..|+++|++|..+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v   32 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKV   32 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEE
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEE
Confidence            677766 877777999999999999975544

>d1dlja3 c.26.3.1 (A:295-402) UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.24  E-value=1.3  Score=33.86  Aligned_cols=69  Identities=14%  Similarity=0.095  Sum_probs=47.3

Q ss_pred             HHHHHHHHhCCCCccceEEEEccC---------ccchHHHHHHHhhCCCEEEEEeCC------------CCCHhhhccCC
Q 017679          218 GCIELLIRSGVEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHAL------------TKNPEQITSEA  276 (368)
Q Consensus       218 gv~~lL~~~~i~l~GK~VvVIG~g---------~~VGrpla~lL~~~gAtVti~h~~------------t~~L~~~~~~A  276 (368)
                      -+++.|+....+  .|+|.|+|-+         +.-...+...|.+.|++|.++.-.            ..++.+.+..+
T Consensus         3 ~ii~~l~~~~~~--~k~I~ilGl~fK~n~dD~R~Sp~i~ii~~L~~~g~~v~iyDP~v~~~~~~~~~~~~~~l~~~~~~s   80 (108)
T d1dlja3           3 QIINVLKEQESP--VKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLESEDQSVLVNDLENFKKQA   80 (108)
T ss_dssp             HHHHHHTTSCCS--SCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCCTTCCSEECCCHHHHHHHC
T ss_pred             HHHHHHHhccCC--CCEEEEEEEEECCCCcchhhhhHHHHHHHHhccccceeeecCCcChhHhccCCEEEeCHHHHHhhC
Confidence            356666554433  3689999922         223567888899999999987432            24788888999


Q ss_pred             CEEEEecCCCCc
Q 017679          277 DIVIAAAGVANL  288 (368)
Q Consensus       277 DIVIsAvG~p~~  288 (368)
                      |+||..+....+
T Consensus        81 DiII~~~~~~~~   92 (108)
T d1dlja3          81 NIIVTNRYDNEL   92 (108)
T ss_dssp             SEEECSSCCGGG
T ss_pred             CEEEEcCCchHH
Confidence            998876655444

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=85.20  E-value=0.33  Score=39.81  Aligned_cols=70  Identities=14%  Similarity=0.298  Sum_probs=47.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhC-CCEEE-EEeCCC-----------CCHhhhccCCCEEEEecCCC-Cc-ccCCCcCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRH-HATVS-IVHALT-----------KNPEQITSEADIVIAAAGVA-NL-VRGSWLKPG  297 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~-gAtVt-i~h~~t-----------~~L~~~~~~ADIVIsAvG~p-~~-I~~e~ik~g  297 (368)
                      -+|.|||.|.+ |+..+..|.+. +.+++ ++.++.           .+..+...+.|+|+.+++.. |+ +-..-++.|
T Consensus         4 irvgiiG~G~i-g~~~~~~l~~~~~~elvav~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvi~tp~~~h~~~a~~aL~aG   82 (170)
T d1f06a1           4 IRVAIVGYGNL-GRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGSATDIPEQAPKFAQF   82 (170)
T ss_dssp             EEEEEECCSHH-HHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCTTTHHHHHHHHHTTT
T ss_pred             ceEEEECChHH-HHHHHHHHHhCCCcEEEEEEecccccccccccccchhhhhhccccceEEEeCCCcccHHHHHHHHHCC
Confidence            37999999886 99999888875 45544 455442           24556678899999998743 33 334456778


Q ss_pred             cEEEEe
Q 017679          298 AVVLDV  303 (368)
Q Consensus       298 avVIDv  303 (368)
                      .-||+.
T Consensus        83 ~~vv~~   88 (170)
T d1f06a1          83 ACTVDT   88 (170)
T ss_dssp             SEEECC
T ss_pred             CcEEEe
Confidence            666653

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=85.20  E-value=0.28  Score=42.07  Aligned_cols=33  Identities=18%  Similarity=0.294  Sum_probs=29.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT  266 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t  266 (368)
                      .+|+|||+|-+ |..+|..|+++|.+|+++.+..
T Consensus         5 ~DViIIGaG~a-Gl~aA~~la~~G~~V~vlEk~~   37 (253)
T d2gqfa1           5 SENIIIGAGAA-GLFCAAQLAKLGKSVTVFDNGK   37 (253)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSS
T ss_pred             CcEEEECcCHH-HHHHHHHHHHCCCcEEEEecCC
Confidence            46999999887 9999999999999999998754

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=84.81  E-value=0.17  Score=45.48  Aligned_cols=31  Identities=23%  Similarity=0.333  Sum_probs=26.6

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEE
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIV  262 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~  262 (368)
                      -|+|+|.|++|.||+.++..|+++|..|.++
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~   32 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVT   32 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            3799999999999999999999998754444

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.33  E-value=1  Score=35.59  Aligned_cols=56  Identities=25%  Similarity=0.236  Sum_probs=41.8

Q ss_pred             CccceEEEEccC---ccchHHHHHHHhhCC-CEEEEEeCCC---------CCHhhhccCCCEEEEecCC
Q 017679          230 IMGKNAVVIGRS---NIVGLPTSLLLQRHH-ATVSIVHALT---------KNPEQITSEADIVIAAAGV  285 (368)
Q Consensus       230 l~GK~VvVIG~g---~~VGrpla~lL~~~g-AtVti~h~~t---------~~L~~~~~~ADIVIsAvG~  285 (368)
                      +.-|+|+|||+|   +-.|.-+...|.+.+ .+|+-+|-+.         +++.+.=...|.++.+++.
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~vp~   74 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPK   74 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEEecCh
Confidence            567999999988   555777888887766 5899998764         3555555667888877764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.81  E-value=0.32  Score=42.58  Aligned_cols=33  Identities=18%  Similarity=0.318  Sum_probs=29.1

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      --.|+|||.|.+ |..+|..|+++|++|+++.+.
T Consensus        16 ~~DVlVIG~G~a-Gl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          16 TVDVVVVGSGGA-GFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             ECSEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             cCCEEEECcCHH-HHHHHHHHHHCCCcEEEEecC
Confidence            347999998876 999999999999999999764

>d1j4aa2 c.23.12.1 (A:2-103,A:301-332) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Formate/glycerate dehydrogenase catalytic domain-like
family: Formate/glycerate dehydrogenases, substrate-binding domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=83.56  E-value=3.1  Score=32.74  Aligned_cols=103  Identities=17%  Similarity=0.074  Sum_probs=64.7

Q ss_pred             eEEEEccCccchHHHHHHHhhCC--CEEEEEeCC-CCCHhhhccCCCEEEEecCCCCcccCCCcC----CCc-EEEEeec
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHAL-TKNPEQITSEADIVIAAAGVANLVRGSWLK----PGA-VVLDVGT  305 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~-t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik----~ga-vVIDvg~  305 (368)
                      ||++.|--.. -+|....+..++  .+|...... +.++.+.++.||.|++....  .++.+.+.    ++. +|.=.|.
T Consensus         2 KI~~f~~~~~-e~~~~e~~~~~~~~v~v~~~~~~~~~e~~~~~~~~d~viv~~~~--~i~~eil~~l~~~~LK~I~~~~v   78 (134)
T d1j4aa2           2 KIFAYAIRED-EKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQL--DYIAETLQALADNGITKMSLRNV   78 (134)
T ss_dssp             EEEECSCCGG-GHHHHHHHHHTCTTSEEEECSSCCCTTTGGGGTTCSEEEECCSS--CBCHHHHHHHHHTTCCEEEESSS
T ss_pred             eEEEEecccc-cHHHHHHHHHhCCCEEEEECCCCCCHHHHHHhcCCCEEEEecCC--CcCHHHHhhhcccCeeEEEEccC
Confidence            5777776665 788877777665  455555433 35677889999988764322  25666553    232 3333222


Q ss_pred             CCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCC-cccHHHHHHHHH
Q 017679          306 CPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMTVAMLLS  355 (368)
Q Consensus       306 n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPG-GVGp~T~amLl~  355 (368)
                      -.                -.+|.+.+.++--.+|-+|| ++...|++|++.
T Consensus        79 G~----------------d~ID~~aa~~~gI~V~N~P~~svae~a~~~ml~  113 (134)
T d1j4aa2          79 GV----------------DNIDMAKAKELGFQITNVPVYSYTTHAVRNMVV  113 (134)
T ss_dssp             CC----------------TTBCHHHHHHTTCEEECCCCSCCBHHHHHHHHH
T ss_pred             Cc----------------CccCHHHHHhCCeEEEECCCCcHHHHHHHHHHH
Confidence            11                23566777777777888887 677888887764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=83.41  E-value=0.76  Score=38.57  Aligned_cols=118  Identities=19%  Similarity=0.215  Sum_probs=68.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC---------------------------------CCHhhhccCCCEE
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT---------------------------------KNPEQITSEADIV  279 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t---------------------------------~~L~~~~~~ADIV  279 (368)
                      ||.|.|.|.+ ||.+++.|..+. .+|.-++...                                 .++.+...++|+|
T Consensus         3 KVaINGfGRI-GR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV   81 (178)
T d1b7go1           3 NVAVNGYGTI-GKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV   81 (178)
T ss_dssp             EEEEECCSHH-HHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred             EEEEECCCHH-HHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence            6899999997 999999998764 5766665432                                 1344556789999


Q ss_pred             EEecCCCCcc--cCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhc-----c---ceEeccCCCcccHHH
Q 017679          280 IAAAGVANLV--RGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMR-----L---ASVITPVPGGVGPMT  349 (368)
Q Consensus       280 IsAvG~p~~I--~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~-----~---a~~iTPVPGGVGp~T  349 (368)
                      |-+||.-.--  -..+++.|.-+|=.|....+   + .   +-.++=-|++++...     .   |++   ...++.|+-
T Consensus        82 iecTG~f~~~e~a~~hl~~G~KvIi~~~~~~~---~-~---~~t~V~GvN~~~~~~~~~~~vVSnAsc---ttn~lap~~  151 (178)
T d1b7go1          82 VDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAE---V-A---DISFSALCNYNEALGKKYIRVVSESIV---VPENIDAIR  151 (178)
T ss_dssp             EECCSTTHHHHHHHHHHHTTCEEEECTTSCGG---G-S---SCEECHHHHHHHHTTCSEEEECCTTTH---HHHHHHHHH
T ss_pred             EECCCCcCCHHHHHHHHHcCCEEEEECCCCcc---c-c---CCeEEeCcchHHhcCCCCCEEEeCCcc---cccccHHHH
Confidence            9999862111  12345556545444433221   0 0   113555566555421     1   223   235777776


Q ss_pred             HHHHHHHHHHHHH
Q 017679          350 VAMLLSNTLDSAK  362 (368)
Q Consensus       350 ~amLl~N~v~a~~  362 (368)
                      .+|.+.+.....|
T Consensus       152 ~~~~~~~~~~~~k  164 (178)
T d1b7go1         152 ASMKLMSAEDSMR  164 (178)
T ss_dssp             HHTTCSCHHHHHH
T ss_pred             HHHHhhcccccee
Confidence            6666655555444

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.51  E-value=0.96  Score=34.56  Aligned_cols=35  Identities=9%  Similarity=0.134  Sum_probs=27.7

Q ss_pred             ccceEEEEccCccchHHHHHHHhh---CCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQR---HHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~~---~gAtVti~h~~t  266 (368)
                      ..|+++|||+|-+ |--+|..|.+   +|.+||++++..
T Consensus        19 ~p~~v~ivGgG~i-g~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGGGFI-SVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECSSHH-HHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEECCcHH-HHHHHHHhhhcccCCcEEEEEeccc
Confidence            4689999998765 9999976654   456899998864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.49  E-value=0.68  Score=36.75  Aligned_cols=48  Identities=15%  Similarity=0.164  Sum_probs=34.6

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEec
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAA  283 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAv  283 (368)
                      |+.|+|++|-.|+.++..+.++|.++...-.  .+..+.+.++|+||--+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id--~~~~~~~~~~DVvIDFS   49 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD--VNGVEELDSPDVVIDFS   49 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE--TTEEEECSCCSEEEECS
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC--CCcHHHhccCCEEEEec
Confidence            6899998666699999999999987654321  23345567889888443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.34  E-value=0.34  Score=40.88  Aligned_cols=41  Identities=22%  Similarity=0.225  Sum_probs=30.3

Q ss_pred             HHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          223 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       223 L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      ++..++ -.|.+|+|+|+|.+ |...+.++...|+ .|+++.+.
T Consensus        18 ~~~a~v-~~G~tVlV~GaG~v-Gl~a~~~ak~~ga~~Vi~~d~~   59 (195)
T d1kola2          18 AVTAGV-GPGSTVYVAGAGPV-GLAAAASARLLGAAVVIVGDLN   59 (195)
T ss_dssp             HHHTTC-CTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEESC
T ss_pred             HHHhCC-CCCCEEEEECcCHH-HHHHHHHHHhhcccceeeeccc
Confidence            455554 36999999999865 9888888878887 67666543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.34  E-value=0.51  Score=37.29  Aligned_cols=35  Identities=17%  Similarity=0.102  Sum_probs=28.7

Q ss_pred             ccceEEEEccCccchHHHHHHHh----hCCCEEEEEeCCC
Q 017679          231 MGKNAVVIGRSNIVGLPTSLLLQ----RHHATVSIVHALT  266 (368)
Q Consensus       231 ~GK~VvVIG~g~~VGrpla~lL~----~~gAtVti~h~~t  266 (368)
                      ++|+++|||+|-+ |--+|..|.    +.|.+||++++..
T Consensus        36 ~~k~i~IvGgG~~-G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          36 EVKSITIIGGGFL-GSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             HCSEEEEECCSHH-HHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCEEEEECCCHH-HHHHHHHHHHHHHhcCCEEEEecccc
Confidence            4789999998765 999888885    3588999998765

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.32  E-value=0.49  Score=42.45  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=30.6

Q ss_pred             CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      .+.-+|+|||+|-. |..+|..|.+.|.+|+|+.+.
T Consensus         5 ~~~~dV~IIGAG~s-Gl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1           5 PEEVDVLVVGAGFS-GLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             CSEEEEEEECCSHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred             CCCCCEEEECccHH-HHHHHHHHHhCCCCEEEEEcC
Confidence            35678999999987 999999999999999999653

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.89  E-value=0.94  Score=34.42  Aligned_cols=37  Identities=14%  Similarity=0.169  Sum_probs=28.8

Q ss_pred             CCccceEEEEccCccchHHHHHHHhh---CCCEEEEEeCCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQR---HHATVSIVHALT  266 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~---~gAtVti~h~~t  266 (368)
                      +-..|+++|||.|-+ |--+|..|.+   .|..|+++.+..
T Consensus        15 ~~~p~~v~IiGgG~i-g~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          15 DEAPKRALCVGGGYI-SIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SSCCSEEEEECSSHH-HHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cccCCeEEEECCChH-HHHHHHHhHhhcccccccceecccc
Confidence            334689999998765 9999987654   478999998764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=81.74  E-value=0.54  Score=40.47  Aligned_cols=34  Identities=24%  Similarity=0.216  Sum_probs=28.4

Q ss_pred             cceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679          232 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL  265 (368)
Q Consensus       232 GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~  265 (368)
                      ++.++|.|+++-+|+.++..|+++|+ .|.++.|+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~   43 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRS   43 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            45899999877789999999999998 57777664

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.43  E-value=0.48  Score=41.22  Aligned_cols=36  Identities=19%  Similarity=0.390  Sum_probs=30.5

Q ss_pred             CCccceEEEEccCccchHHHHHHHhh-CCCEEEEEeCC
Q 017679          229 EIMGKNAVVIGRSNIVGLPTSLLLQR-HHATVSIVHAL  265 (368)
Q Consensus       229 ~l~GK~VvVIG~g~~VGrpla~lL~~-~gAtVti~h~~  265 (368)
                      ......|+|||+|-. |..+|..|++ .|.+|+++.+.
T Consensus        30 ~~~e~DViVIGaGpa-GL~aA~~LA~~~G~~V~vlE~~   66 (278)
T d1rp0a1          30 TYAETDVVVVGAGSA-GLSAAYEISKNPNVQVAIIEQS   66 (278)
T ss_dssp             HHTEEEEEEECCSHH-HHHHHHHHHTSTTSCEEEEESS
T ss_pred             cccCCCEEEECCCHH-HHHHHHHHHHccCCeEEEEecC
Confidence            456788999999876 9999999876 59999999764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.32  E-value=0.71  Score=41.63  Aligned_cols=32  Identities=9%  Similarity=0.066  Sum_probs=26.9

Q ss_pred             cceEEEEccC---ccchHHHHHHHhhCCCEEEEEeC
Q 017679          232 GKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHA  264 (368)
Q Consensus       232 GK~VvVIG~g---~~VGrpla~lL~~~gAtVti~h~  264 (368)
                      +|-++|-|++   ++ |+.+|..|+++||+|.++.+
T Consensus         2 ~kVAlITGaa~s~GI-G~aiA~~la~~GA~V~i~~~   36 (329)
T d1uh5a_           2 EDICFIAGIGDTNGY-GWGIAKELSKRNVKIIFGIW   36 (329)
T ss_dssp             CCEEEEECCSSSSSH-HHHHHHHHHHTTCEEEEEEC
T ss_pred             CcEEEEeCCCCCChH-HHHHHHHHHHcCCEEEEEeC
Confidence            5778888943   55 99999999999999999854

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.03  E-value=0.63  Score=36.78  Aligned_cols=30  Identities=17%  Similarity=0.309  Sum_probs=25.2

Q ss_pred             eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ||+|||+|-+ |.-+|..|. ++..||++++.
T Consensus         2 rVvIIGgG~~-G~e~A~~l~-~~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVGNGPG-GFELAKQLS-QTYEVTVIDKE   31 (167)
T ss_dssp             EEEEECCSHH-HHHHHHHHT-TTSEEEEECSS
T ss_pred             eEEEECCcHH-HHHHHHHHH-cCCCEEEEecc
Confidence            7999998865 999999886 47799999763

>d2naca2 c.23.12.1 (A:1-147,A:336-374) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Formate/glycerate dehydrogenase catalytic domain-like
family: Formate/glycerate dehydrogenases, substrate-binding domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=80.99  E-value=1.4  Score=37.50  Aligned_cols=80  Identities=15%  Similarity=0.121  Sum_probs=52.0

Q ss_pred             HHHHHhhCCCEEEEEeCCCC---CHhhhccCCCEEEEecCCCCcccCCCcCC--C-cEEEEeecCCCCCCCCCCCCCCcE
Q 017679          248 TSLLLQRHHATVSIVHALTK---NPEQITSEADIVIAAAGVANLVRGSWLKP--G-AVVLDVGTCPVDVSVDPSCEYGYR  321 (368)
Q Consensus       248 la~lL~~~gAtVti~h~~t~---~L~~~~~~ADIVIsAvG~p~~I~~e~ik~--g-avVIDvg~n~~~~~~d~t~~~~~k  321 (368)
                      +...|..+|.++.+...+..   .+.+.+.+|||||+.-=.+..++.|.+..  . .+|+=.|.-.              
T Consensus        59 lr~~Le~~GhelV~~sd~~~~~~el~k~l~DADivI~~pf~~~~lt~e~i~~ap~LKlI~~~g~G~--------------  124 (186)
T d2naca2          59 LRKYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGS--------------  124 (186)
T ss_dssp             CHHHHHHTTCEEEEESCCSSTTSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCC--------------
T ss_pred             HHHHHHHCCCEEEEecCCCCChHHHHhhcccCCEEEEecccccccCHHHHhcCccceEEEEeccCC--------------
Confidence            45678888998877766542   47789999999998742344577776632  2 2444444322              


Q ss_pred             EEcccchhhhhccceEeccCCC
Q 017679          322 LMGDVCYEEAMRLASVITPVPG  343 (368)
Q Consensus       322 l~GDVd~~~~~~~a~~iTPVPG  343 (368)
                        --||.+.+.++--.++-+||
T Consensus       125 --D~VDl~aa~e~gI~V~n~pg  144 (186)
T d2naca2         125 --DHVDLQSAIDRNVTVAEVTY  144 (186)
T ss_dssp             --TTBCHHHHHHTTCEEEECTT
T ss_pred             --ccccHHHHHhCCCEEEECCC
Confidence              23566777777666777776

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.84  E-value=0.57  Score=38.75  Aligned_cols=32  Identities=13%  Similarity=0.133  Sum_probs=28.5

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -.|+|||+|-+ |..+|..+.+.|.+|+++.+.
T Consensus         3 yDvvVIG~G~a-G~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           3 YDYIAIGGGSG-GIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHTTTCCEEEEESS
T ss_pred             CCEEEECCCHH-HHHHHHHHHHCCCEEEEEecc
Confidence            36899999887 999999999999999999753

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=80.42  E-value=0.54  Score=41.42  Aligned_cols=32  Identities=19%  Similarity=0.322  Sum_probs=28.4

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -.|+|||.|.+ |...|..|+++|++|+++...
T Consensus         6 ~DVvVIG~G~A-Gl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           6 CDSLVIGGGLA-GLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             CSEEEECCSHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred             cCEEEECcCHH-HHHHHHHHHHCCCCEEEEecC
Confidence            35999999887 999999999999999999754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.28  E-value=0.63  Score=38.46  Aligned_cols=32  Identities=16%  Similarity=0.222  Sum_probs=28.8

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      ..|+|||+|-+ |...|..|++.|.+|+++.+.
T Consensus         6 yDviVIG~GpA-Gl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           6 HDVVIIGGGPA-GYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             cCEEEECCCHH-HHHHHHHHHHCCCcEEEEEec
Confidence            47999999887 999999999999999999754

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=80.17  E-value=0.53  Score=41.62  Aligned_cols=32  Identities=22%  Similarity=0.369  Sum_probs=28.7

Q ss_pred             ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679          233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL  265 (368)
Q Consensus       233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~  265 (368)
                      -.|+|||.|.+ |..+|..|+++|++|+++.+.
T Consensus        24 ~DVvVIG~G~a-Gl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          24 TDVVIIGSGGA-GLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             CSEEEECSSHH-HHHHHHHHHTTTCCEEEECSS
T ss_pred             ceEEEECcCHH-HHHHHHHHHHCCCcEEEEeCC
Confidence            46999998887 999999999999999999764