Citrus Sinensis ID: 017730

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------
Protein Sequence
MLLCLLPIRSRTMSNLLSFELAISTPKSALEKSSLTSVKTPLISISSTKQLKITEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYT
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccccHHcccccEEEEccccHHHHHHHccccccccccccccccccccHcccccccccccccccccccccccccccHccccccccHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHccccccHcccccccccc
Coil and Loop (DISEMBL)
MLLCLLPIRSRTMSNLLSFELAIStpksalekssltsvktplisisstkqlKITEASHsfktntlssshrtsrqVCGVVTanaemeedqsekevaegytltQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCrtradeesepTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSethdsledCDAVARLATRCLSAVSAYDKTLEHVETLDSAQakfddilnspsvDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATksslrgiaPKEIKLLKYLLNIIDPEERFSALatafspgsehesknpkalyt
Flexible Loop (DISEMBL)
MLLCLLPIRSRTMSNLLSFELAISTpksalekssltsvktplisisstkqlkiTEASHSFktntlssshrtsrqVCGVVTANaemeedqsekevaegYTLTQFCDKIIDvflnekprvkqwrkylvfredwnkyrESFYNRcrtradeeseptmkEKLISLARKVKKIDDEMESHYELLkeiqdsptdinAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKAtksslrgiaPKEIKLLKYLLNIIDPEERFSALATafspgsehesknpkalyt
Low Complexity Region (SEG)
MLLCLLPIRSRTMSNLLSFELAISTPKSALEKSSLTSVKTPLISISSTKQLKITEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYT
Disordered region (IsUnstruct)
**LCLLPIRSRTMSNLLSFELAI***********************************************************************AEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCR*********************************ELLKEI***PTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSAL********************
Disordered Region (DISOPRED)
*LLCLL*IRSRTMSNLLSFELAISTPKSALEKSSLTSVK**********************************************************YTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRT*************LISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWA*A*******NEVKDIMYCLYK**************KLLKYLLNIIDPEERFSALATAFSPGSEHESK***ALYT
Disordered Region (DISEMBL)
MLLCLLPIRSRTMSNLLSFELAISTPKS*********VKTPLISISSTKQLKITEASHSF*************QVCGVVTANAE**********AEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCR**********MKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATA*****************
Disordered Region (DISPRO)
MLLCLLPIRSRTMSNLLSFELAISTPKSALEKSSLT*********************************************************VAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSP**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLCLLPIRSRTMSNLLSFELAISTPKSALEKSSLTSVKTPLISISSTKQLKITEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	367	2.2.26 [Sep-21-2011]
Q84WN0	427	Uncharacterized protein A	yes	no	0.822	0.707	0.728	1e-129

>sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2

 Score =  462 bits (1188), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 225/309 (72%), Positives = 261/309 (84%), Gaps = 7/309 (2%)

Query: 59  SFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRV 118
           +F T+T++ +  TS +V   V       ED  E EVAEGYT+ QFCDKIID+FLNEKP+V
Sbjct: 49  TFATDTVTYNGTTSAEVKSSV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKV 101

Query: 119 KQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYEL 178
           KQW+ YLV R++WNKY  +FY RCR RAD E++P +K+KL+SL  KVKKID EME H +L
Sbjct: 102 KQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDL 161

Query: 179 LKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAY 238
           LKEIQ++PTDINA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAY
Sbjct: 162 LKEIQENPTDINAIAAKRRRDFTGEFFRYVTLLSETLDGLEDRDAVARLATRCLSAVSAY 221

Query: 239 DKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKAS 298
           D TLE VETLD+AQAKF+DILNSPSVD ACEKI+SLAKAKELDSSLILLIN A+A+AK S
Sbjct: 222 DNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSAYAAAKES 281

Query: 299 QTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHE 358
           QT+ NE KDIMY LYKATKSSLR I PKEIKLLKYLLNI DPEERFSALATAFSPG +HE
Sbjct: 282 QTVTNEAKDIMYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHE 341

Query: 359 SKNPKALYT 367
           +K+PKALYT
Sbjct: 342 AKDPKALYT 350

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	367
356497669	432	PREDICTED: uncharacterized protein At4g3	0.836	0.710	0.726	1e-131
359495804	431	PREDICTED: uncharacterized protein At4g3	0.967	0.823	0.681	1e-131
297798078	643	hypothetical protein ARALYDRAFT_327981 [	0.953	0.544	0.662	1e-128
357485321	422	hypothetical protein MTR_5g030900 [Medic	0.765	0.665	0.768	1e-128
79499023	427	uncharacterized protein [Arabidopsis tha	0.822	0.707	0.728	1e-127
388520063	436	unknown [Lotus japonicus]	0.836	0.704	0.725	1e-127
27754707	445	unknown protein [Arabidopsis thaliana]	0.822	0.678	0.728	1e-127
4467098	673	putative protein [Arabidopsis thaliana]	0.822	0.448	0.728	1e-127
449457285	435	PREDICTED: uncharacterized protein At4g3	0.945	0.797	0.657	1e-123
242093206	411	hypothetical protein SORBIDRAFT_10g02104	0.760	0.678	0.628	1e-102

>gi|356497669|ref|XP_003517682.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Glycine max]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/311 (72%), Positives = 263/311 (84%), Gaps = 4/311 (1%)

Query: 57  SHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKP 116
           + +FK + L  +   S Q     TA AE    + E E+A+GYT+TQFCDK+ID FLNEK 
Sbjct: 55  AQNFKPHILLCTSLPSPQASSASTAQAE----EHEVEIAKGYTMTQFCDKMIDFFLNEKT 110

Query: 117 RVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHY 176
           + K+WRKYL+FRE+W KYR+ FYNRC+ RAD E++P MKEK ISL RK+KKIDDEME HY
Sbjct: 111 KSKEWRKYLIFREEWKKYRDRFYNRCQRRADMENDPVMKEKFISLRRKLKKIDDEMEGHY 170

Query: 177 ELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVS 236
           ELL EIQDSP DINA+VARRRKDFTGEFF YLSL+S+T+DSLED D ++RL +RCLSAVS
Sbjct: 171 ELLMEIQDSPMDINAIVARRRKDFTGEFFHYLSLISDTYDSLEDRDGISRLGSRCLSAVS 230

Query: 237 AYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAK 296
           AYD TLE++ETLD+AQAKFDDILNSPS+D+AC+KIKSLAKAKELDSSLILLI+ AWA AK
Sbjct: 231 AYDNTLENIETLDAAQAKFDDILNSPSIDIACQKIKSLAKAKELDSSLILLISSAWAKAK 290

Query: 297 ASQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSE 356
            S TMKNEVKDIMY LY+ATKSSLR I PKEIKLLK+LLNIIDPEERFSALATAF+PG E
Sbjct: 291 ESTTMKNEVKDIMYQLYRATKSSLRSITPKEIKLLKHLLNIIDPEERFSALATAFTPGDE 350

Query: 357 HESKNPKALYT 367
           HE+K+P ALYT
Sbjct: 351 HEAKDPNALYT 361

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495804|ref|XP_003635095.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Vitis vinifera] gi|297736678|emb|CBI25695.3| unnamed protein product [Vitis vinifera]

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/364 (68%), Positives = 288/364 (79%), Gaps = 9/364 (2%)

Query: 13  MSNLLSFELAI-STPKSALEKSSLTSVKTPLISISSTKQLKITEASHSFKTNTLSSSHR- 70
           MSNLL F+L + +T K ++   +L S    L SISS      ++ S S   N+ +   R 
Sbjct: 1   MSNLLGFKLLLCNTTKPSVLNQNLFSASILLPSISSPPLFLPSKQSDSLTPNSRTRKGRG 60

Query: 71  TSRQVCGVVTANA-------EMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRK 123
           TS  V     AN+           +Q E EVA GYT+TQFCDKIIDVF+NEKP++K+WRK
Sbjct: 61  TSDAVLSNFRANSTANSIGAAEVAEQVEVEVANGYTITQFCDKIIDVFMNEKPKLKEWRK 120

Query: 124 YLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQ 183
           YLVFRE+WNKYRE+FYNRC+TRA  E++P +K+KLI L RKVKKIDDEME H ELL+E+Q
Sbjct: 121 YLVFREEWNKYREAFYNRCQTRAYAETDPVIKKKLIELGRKVKKIDDEMERHTELLEEVQ 180

Query: 184 DSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLE 243
            SP D+NA+V RRRKDFTGEFFR+LSL+SET+DSLED DA+ARL  RCLSAVSAYD TLE
Sbjct: 181 SSPMDVNAIVVRRRKDFTGEFFRHLSLLSETYDSLEDRDAMARLGARCLSAVSAYDNTLE 240

Query: 244 HVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKN 303
            VETLD AQAKFDDILNSPS+DVACEKIKSLAKAKELDSSLILLIN AW++AK S TMKN
Sbjct: 241 IVETLDVAQAKFDDILNSPSIDVACEKIKSLAKAKELDSSLILLINSAWSAAKESTTMKN 300

Query: 304 EVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPK 363
           EVKDIMY LYKATKSSLR IAPKEIKLLK+LLNI DPEERFSALA+AFSPG + E+K+P 
Sbjct: 301 EVKDIMYHLYKATKSSLRSIAPKEIKLLKHLLNITDPEERFSALASAFSPGDDREAKDPN 360

Query: 364 ALYT 367
           ALYT
Sbjct: 361 ALYT 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798078|ref|XP_002866923.1| hypothetical protein ARALYDRAFT_327981 [Arabidopsis lyrata subsp. lyrata] gi|297312759|gb|EFH43182.1| hypothetical protein ARALYDRAFT_327981 [Arabidopsis lyrata subsp. lyrata]

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/361 (66%), Positives = 286/361 (79%), Gaps = 11/361 (3%)

Query: 10  SRTMSNLLSFELAISTPKSALEKSSLTSVKTPLISISS--TKQLKITEASH-SFKTNTLS 66
            + M+NLL   +  S+    +  SS  S +T L+  S+      KI ++S  +F ++T++
Sbjct: 215 GQKMANLLETSIFFSSADKLISFSSHNS-QTHLLPFSAFINGGRKIRKSSTITFASDTVT 273

Query: 67  SSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLV 126
            S  TS +V   V       ED  E EVAEGYT+ QFCDKIID+FLNEKP+VKQW+ YLV
Sbjct: 274 YSSITSTEVKSFV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKVKQWKTYLV 326

Query: 127 FREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSP 186
            R++WNKY  +FY RCR RAD E++P +K+KL+SL  KVKKID+EME H +LLKEIQ++P
Sbjct: 327 LRDEWNKYSVNFYRRCRIRADSETDPILKQKLLSLESKVKKIDEEMEKHNDLLKEIQENP 386

Query: 187 TDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVE 246
           TDINA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAYD TLE VE
Sbjct: 387 TDINAIAAKRRRDFTGEFFRYVALLSETLDGLEDRDAVARLATRCLSAVSAYDNTLESVE 446

Query: 247 TLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVK 306
           TLDSAQAKFDDILNSPSVD ACEKI+SLAK+KELDSSLILLIN A+A+AK SQT+ NE K
Sbjct: 447 TLDSAQAKFDDILNSPSVDAACEKIRSLAKSKELDSSLILLINSAYAAAKESQTVTNEAK 506

Query: 307 DIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALY 366
           D+MY LYKATKSSLR I PKEIKLLKYLLNI DPEERFSALATAFSPG +HE+K+PKALY
Sbjct: 507 DVMYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHEAKDPKALY 566

Query: 367 T 367
           T
Sbjct: 567 T 567

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357485321|ref|XP_003612948.1| hypothetical protein MTR_5g030900 [Medicago truncatula] gi|163889367|gb|ABY48137.1| putative protein [Medicago truncatula] gi|355514283|gb|AES95906.1| hypothetical protein MTR_5g030900 [Medicago truncatula]

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 216/281 (76%), Positives = 252/281 (89%)

Query: 87  EDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRA 146
           E+Q++ E+ +GYT+TQFCDK+ID+FLNEK + K+WRKYLVFR++W KYR SF+ RC+ RA
Sbjct: 71  EEQADIEIVKGYTMTQFCDKMIDLFLNEKTKSKEWRKYLVFRDEWKKYRNSFFIRCQRRA 130

Query: 147 DEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFR 206
           D E++PTMKEK  SL R+VKKIDDEME HYELLKEIQD PTDINA+VARRRKDFTGEFFR
Sbjct: 131 DMENDPTMKEKFTSLGRRVKKIDDEMEGHYELLKEIQDFPTDINAIVARRRKDFTGEFFR 190

Query: 207 YLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDV 266
           YLSL+++T+DSL+D D +ARL  +CLSAV AYD TL ++ETLD+AQAKFDDILNSPS+DV
Sbjct: 191 YLSLIADTYDSLDDRDGIARLGAKCLSAVGAYDNTLMNMETLDAAQAKFDDILNSPSIDV 250

Query: 267 ACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRGIAPK 326
           AC+KIKSLAKAKELDSSLILLI+GAWA AK S TMKNEVK+IMY LYK TKSSLR IAPK
Sbjct: 251 ACKKIKSLAKAKELDSSLILLISGAWAKAKESTTMKNEVKEIMYQLYKTTKSSLRTIAPK 310

Query: 327 EIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYT 367
           EI+LLK+LLNIIDPEERFSALATAFSPG EHE+K+P ALYT
Sbjct: 311 EIRLLKHLLNIIDPEERFSALATAFSPGDEHEAKDPNALYT 351

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79499023|ref|NP_195505.2| uncharacterized protein [Arabidopsis thaliana] gi|209574320|sp|Q84WN0.2|Y4920_ARATH RecName: Full=Uncharacterized protein At4g37920, chloroplastic; Flags: Precursor gi|332661453|gb|AEE86853.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/309 (72%), Positives = 261/309 (84%), Gaps = 7/309 (2%)

Query: 59  SFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRV 118
           +F T+T++ +  TS +V   V       ED  E EVAEGYT+ QFCDKIID+FLNEKP+V
Sbjct: 49  TFATDTVTYNGTTSAEVKSSV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKV 101

Query: 119 KQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYEL 178
           KQW+ YLV R++WNKY  +FY RCR RAD E++P +K+KL+SL  KVKKID EME H +L
Sbjct: 102 KQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDL 161

Query: 179 LKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAY 238
           LKEIQ++PTDINA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAY
Sbjct: 162 LKEIQENPTDINAIAAKRRRDFTGEFFRYVTLLSETLDGLEDRDAVARLATRCLSAVSAY 221

Query: 239 DKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKAS 298
           D TLE VETLD+AQAKF+DILNSPSVD ACEKI+SLAKAKELDSSLILLIN A+A+AK S
Sbjct: 222 DNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSAYAAAKES 281

Query: 299 QTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHE 358
           QT+ NE KDIMY LYKATKSSLR I PKEIKLLKYLLNI DPEERFSALATAFSPG +HE
Sbjct: 282 QTVTNEAKDIMYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHE 341

Query: 359 SKNPKALYT 367
           +K+PKALYT
Sbjct: 342 AKDPKALYT 350

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520063|gb|AFK48093.1| unknown [Lotus japonicus]

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/310 (72%), Positives = 261/310 (84%), Gaps = 3/310 (0%)

Query: 58  HSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPR 117
            +FK  TL      S Q     TA  E   +Q E E+ +G T+TQFCDK+ID+FLNEK +
Sbjct: 57  QNFKPCTLLCGSLPSPQASSASTAQVE---EQEETEIVKGCTMTQFCDKMIDLFLNEKTK 113

Query: 118 VKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYE 177
            K+WRKYL+FRE+W KYR+SF++R ++RAD E++P +K+K ISL R+VKKIDDEME H  
Sbjct: 114 SKEWRKYLIFREEWKKYRDSFFSRYQSRADMENDPIIKDKFISLERRVKKIDDEMEGHCN 173

Query: 178 LLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSA 237
           LLKEIQD PTDINA+VARRRKDFTGEFFRYLSLV++T+DSLED D ++RL TRCLSAV+A
Sbjct: 174 LLKEIQDFPTDINAIVARRRKDFTGEFFRYLSLVADTYDSLEDRDGISRLGTRCLSAVTA 233

Query: 238 YDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKA 297
           YD TLE+VETLD+AQAKFDDILNSPS+DVAC+KIKSLAKAKELDSSLILLI+ AWA+AK 
Sbjct: 234 YDNTLENVETLDTAQAKFDDILNSPSIDVACQKIKSLAKAKELDSSLILLISSAWANAKE 293

Query: 298 SQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEH 357
           S TMKNEVKDIMY LYKATKSSLR I PKEIKLLK+LLNIIDPEERFSALATAFSPG  H
Sbjct: 294 STTMKNEVKDIMYRLYKATKSSLRSITPKEIKLLKHLLNIIDPEERFSALATAFSPGDGH 353

Query: 358 ESKNPKALYT 367
           E+KNP ALYT
Sbjct: 354 EAKNPDALYT 363

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|27754707|gb|AAO22797.1| unknown protein [Arabidopsis thaliana]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/309 (72%), Positives = 261/309 (84%), Gaps = 7/309 (2%)

Query: 59  SFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRV 118
           +F T+T++ +  TS +V   V       ED  E EVAEGYT+ QFCDKIID+FLNEKP+V
Sbjct: 67  TFATDTVTYNGTTSAEVKSSV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKV 119

Query: 119 KQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYEL 178
           KQW+ YLV R++WNKY  +FY RCR RAD E++P +K+KL+SL  KVKKID EME H +L
Sbjct: 120 KQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDL 179

Query: 179 LKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAY 238
           LKEIQ++PTDINA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAY
Sbjct: 180 LKEIQENPTDINAIAAKRRRDFTGEFFRYVALLSETLDGLEDRDAVARLATRCLSAVSAY 239

Query: 239 DKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKAS 298
           D TLE VETLD+AQAKF+DILNSPSVD ACEKI+SLAKAKELDSSLILLIN A+A+AK S
Sbjct: 240 DNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSAYAAAKES 299

Query: 299 QTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHE 358
           QT+ NE KDIMY LYKATKSSLR I PKEIKLLKYLLNI DPEERFSALATAFSPG +HE
Sbjct: 300 QTITNEAKDIMYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHE 359

Query: 359 SKNPKALYT 367
           +K+PKALYT
Sbjct: 360 AKDPKALYT 368

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4467098|emb|CAB37532.1| putative protein [Arabidopsis thaliana] gi|7270775|emb|CAB80457.1| putative protein [Arabidopsis thaliana]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/309 (72%), Positives = 261/309 (84%), Gaps = 7/309 (2%)

Query: 59  SFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRV 118
           +F T+T++ +  TS +V   V       ED  E EVAEGYT+ QFCDKIID+FLNEKP+V
Sbjct: 295 TFATDTVTYNGTTSAEVKSSV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKV 347

Query: 119 KQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYEL 178
           KQW+ YLV R++WNKY  +FY RCR RAD E++P +K+KL+SL  KVKKID EME H +L
Sbjct: 348 KQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDL 407

Query: 179 LKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAY 238
           LKEIQ++PTDINA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAY
Sbjct: 408 LKEIQENPTDINAIAAKRRRDFTGEFFRYVTLLSETLDGLEDRDAVARLATRCLSAVSAY 467

Query: 239 DKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKAS 298
           D TLE VETLD+AQAKF+DILNSPSVD ACEKI+SLAKAKELDSSLILLIN A+A+AK S
Sbjct: 468 DNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSAYAAAKES 527

Query: 299 QTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHE 358
           QT+ NE KDIMY LYKATKSSLR I PKEIKLLKYLLNI DPEERFSALATAFSPG +HE
Sbjct: 528 QTVTNEAKDIMYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHE 587

Query: 359 SKNPKALYT 367
           +K+PKALYT
Sbjct: 588 AKDPKALYT 596

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457285|ref|XP_004146379.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Cucumis sativus] gi|449523604|ref|XP_004168813.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Cucumis sativus]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/365 (65%), Positives = 285/365 (78%), Gaps = 18/365 (4%)

Query: 13  MSNLLSFELAISTPKSALEKSSLTSVKTPLISISSTKQLKITEASHSFKTNTLSSSHRTS 72
            +N L F+  +S+ K  +  S  T++  PL SI S    K +            S +RTS
Sbjct: 3   FTNHLPFQFYVSSTKPFIFPSFSTTL-NPLPSIYSASPFKPS-------PKISKSDNRTS 54

Query: 73  RQVCG---VVTANAEM-------EEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWR 122
             +     +  A+A +       +E+Q E EVA+GY+L+QFCDKIID+FLNEKP+ K+WR
Sbjct: 55  VTITAPLQIFNASARVNDVATSEKEEQVEMEVAKGYSLSQFCDKIIDIFLNEKPKTKEWR 114

Query: 123 KYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEI 182
           K+LVFRE+W KYRESFY+ C+ RAD E +P MKEKLISL RKVKKIDDEME H ELLKE+
Sbjct: 115 KFLVFREEWKKYRESFYSHCQRRADWEDDPIMKEKLISLRRKVKKIDDEMEIHSELLKEL 174

Query: 183 QDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTL 242
           QDSPTDINA+VA+R K+FT EFF++L+L+SETHDSLED DAVARLA RCL+AVSAY++TL
Sbjct: 175 QDSPTDINAIVAKRHKEFTDEFFKFLTLISETHDSLEDRDAVARLAARCLAAVSAYNRTL 234

Query: 243 EHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMK 302
           E+VETLDSAQ KFD+ILNSPS+DVACEKI SLAKAKELDSSLILLIN AWASAK S TMK
Sbjct: 235 ENVETLDSAQVKFDNILNSPSLDVACEKIASLAKAKELDSSLILLINSAWASAKESTTMK 294

Query: 303 NEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNP 362
           NEVK+IMY LYKATKSSLR +APKEIKLLK+LLNI+DPEERFSALAT FSPG   E K+P
Sbjct: 295 NEVKEIMYHLYKATKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATTFSPGDGSEQKDP 354

Query: 363 KALYT 367
            ALYT
Sbjct: 355 NALYT 359

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242093206|ref|XP_002437093.1| hypothetical protein SORBIDRAFT_10g021040 [Sorghum bicolor] gi|241915316|gb|EER88460.1| hypothetical protein SORBIDRAFT_10g021040 [Sorghum bicolor]

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/280 (62%), Positives = 227/280 (81%), Gaps = 1/280 (0%)

Query: 88  DQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRAD 147
           DQ+E EVA GYT+T+ CDK I++F+ +KP  K WRK LVFRE+W +YRE FY RC+ R D
Sbjct: 67  DQTEAEVAMGYTMTEICDKFIELFMYKKPETKDWRKLLVFREEWRRYREHFYKRCQVRID 126

Query: 148 EESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRY 207
            +++P++K+KL+ LARKVKKID+E+E H EL  E++++P DINA+VARRRKDFTGEFFR+
Sbjct: 127 MDTDPSLKQKLVVLARKVKKIDNEIEKHMELFNELRENPADINAIVARRRKDFTGEFFRH 186

Query: 208 LSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPSVDVA 267
           L+ +   ++ L++ D + RL  +CLSA+ AYD TLE ++ ++SAQ KFDDILNS S+D A
Sbjct: 187 LNFLVNAYNGLDERDGIVRLGAKCLSAIHAYDCTLEQLD-IESAQLKFDDILNSSSLDGA 245

Query: 268 CEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRGIAPKE 327
           C+KIKSLAKAKELDSSLILLIN AWA+AK S+TM ++VKDIMY +Y  TK SL+ I+P E
Sbjct: 246 CDKIKSLAKAKELDSSLILLINRAWAAAKESKTMNDKVKDIMYHIYTTTKESLKSISPPE 305

Query: 328 IKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYT 367
           +KLLKYLLNI +PEERF ALATAF PG EHE+K+  ALYT
Sbjct: 306 MKLLKYLLNIEEPEERFGALATAFFPGDEHEAKDEDALYT 345

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	367
TAIR|locus:2121036	427	AT4G37920 "AT4G37920" [Arabido	0.942	0.810	0.662	2.1e-116
TAIR|locus:2035957	414	AT1G36320 "AT1G36320" [Arabido	0.773	0.685	0.461	4.4e-68
DICTYBASE|DDB_G0286355	2116	mhcA "myosin heavy chain" [Dic	0.855	0.148	0.214	0.00014
MGI|MGI:1339712	1937	Myh8 "myosin, heavy polypeptid	0.768	0.145	0.241	0.00072

TAIR|locus:2121036 AT4G37920 "AT4G37920" [Arabidopsis thaliana (taxid:3702)]

 Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
 Identities = 238/359 (66%), Positives = 283/359 (78%)

Query:    13 MSNLLSFELAISTPKSALE---KSSLTSVKTPLISISSTKQLKITEASH-SFKTNTLSSS 68
             M+NLL   +  S+    L    K+S T    P  +  +  + KI ++S  +F T+T++ +
Sbjct:     1 MANLLETSIFFSSADKLLSFPPKNSQTH-HLPFSAFINGGR-KIRKSSTITFATDTVTYN 58

Query:    69 HRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFR 128
               TS +V   V       ED  E EVAEGYT+ QFCDKIID+FLNEKP+VKQW+ YLV R
Sbjct:    59 GTTSAEVKSSV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKVKQWKTYLVLR 111

Query:   129 EDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTD 188
             ++WNKY  +FY RCR RAD E++P +K+KL+SL  KVKKID EME H +LLKEIQ++PTD
Sbjct:   112 DEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDLLKEIQENPTD 171

Query:   189 INAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETL 248
             INA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAYD TLE VETL
Sbjct:   172 INAIAAKRRRDFTGEFFRYVTLLSETLDGLEDRDAVARLATRCLSAVSAYDNTLESVETL 231

Query:   249 DSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDI 308
             D+AQAKF+DILNSPSVD ACEKI+SLAKAKELDSSLILLIN A+A+AK SQT+ NE KDI
Sbjct:   232 DTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSAYAAAKESQTVTNEAKDI 291

Query:   309 MYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYT 367
             MY LYKATKSSLR I PKEIKLLKYLLNI DPEERFSALATAFSPG +HE+K+PKALYT
Sbjct:   292 MYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHEAKDPKALYT 350

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2035957 AT1G36320 "AT1G36320" [Arabidopsis thaliana (taxid:3702)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 132/286 (46%), Positives = 198/286 (69%)

Query:    84 EMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCR 143
             E ++D SE+ V +   + + CDK+I+VF+ +KP    WR+ L F ++W+  R  FY RC+
Sbjct:    77 EEKKDGSEEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYKRCQ 136

Query:   144 TRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSP-TDINAVVARRRKDFTG 202
              RAD E  P MK K+  LARK+K++D++++ H ELL  I+ +P  +I  +VARRRKDFT 
Sbjct:   137 ERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPAEIGELVARRRKDFTN 196

Query:   203 EFFRYLSLVSETH-DSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNS 261
             EFF +L  V+E++ D+ ++ +A+A L    ++AV AYD + E ++ L++A+ K  DI+NS
Sbjct:   197 EFFEHLHTVAESYYDNPDEQNALASLGKLSIAAVQAYDTSTESIDALNAAEMKLQDIINS 256

Query:   262 PSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLR 321
             PS+D AC KI SLA+  +LDS+L+L+I  AW++AK S  MK EVKDI+Y LY   + +L+
Sbjct:   257 PSLDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYVTARGNLQ 316

Query:   322 GIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYT 367
              + PKE+++LKYLL+I DP+E+ SAL  AF+PG E E  +   LYT
Sbjct:   317 RLMPKEVRILKYLLSIEDPQEQISALQDAFTPGDELEGTDVDYLYT 362

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

DICTYBASE|DDB_G0286355 mhcA "myosin heavy chain" [Dictyostelium discoideum (taxid:44689)]

 Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
 Identities = 74/345 (21%), Positives = 151/345 (43%)

Query:    33 SSLTSVKTPLISISSTKQLKITEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEK 92
             S L S    L  I ST + ++       +   L+ S+   +Q         E++ +    
Sbjct:  1160 SELQSTIAKLEKIKSTLEGEVARLQGELEAEQLAKSN-VEKQ-----KKKVELDLEDKSA 1213

Query:    93 EVAEGYTLTQFCDKI---IDVFLNE-KPRVKQWRKYLVFREDWNKYRESFYNRCRTR--A 146
             ++AE     Q  DK+   ++  L+E + ++ +     V  +  NK+ E+ +N  +    A
Sbjct:  1214 QLAEETAAKQALDKLKKKLEQELSEVQTQLSEANNKNVNSDSTNKHLETSFNNLKLELEA 1273

Query:   147 DEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFR 206
             +++++  +++K + L  ++K +++++E   +  +  +    D+   V+   KD   E   
Sbjct:  1274 EQKAKQALEKKRLGLESELKHVNEQLEEEKKQKESNEKRKVDLEKEVSEL-KDQIEEEVA 1332

Query:   207 YLSLVSETHDSLE-DCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPS-V 264
                 V+E  +  E + D + R   +    VS+ DK++E ++TL   QAK +++ N+    
Sbjct:  1333 SKKAVTEAKNKKESELDEIKR---QYADVVSSRDKSVEQLKTL---QAKNEELRNTAEEA 1386

Query:   265 DVACEKI-KSLAKAK-ELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRG 322
             +   ++  +S  KA+ +L+ ++  L        KA + MK    D     Y++TKS L  
Sbjct:  1387 EGQLDRAERSKKKAEFDLEEAVKNLEEETAKKVKAEKAMKKAETD-----YRSTKSELDD 1441

Query:   323 IAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYT 367
                K +   +Y+  I    E  S L +      E  +   KA  T
Sbjct:  1442 A--KNVSSEQYV-QIKRLNEELSELRSVLEEADERCNSAIKAKKT 1483

GO:0032009 "early phagosome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0071889 "14-3-3 protein binding" evidence=IPI

GO:0000910 "cytokinesis" evidence=IGI;IMP

GO:0033275 "actin-myosin filament sliding" evidence=IDA

GO:0030898 "actin-dependent ATPase activity" evidence=IDA

GO:0000146 "microfilament motor activity" evidence=IDA

GO:0051015 "actin filament binding" evidence=IEA;IDA

GO:0060328 "cytoplasmic actin-based contraction involved in forward cell motility" evidence=IMP

GO:0034461 "uropod retraction" evidence=IMP

GO:0031270 "pseudopodium retraction" evidence=IMP

GO:0030866 "cortical actin cytoskeleton organization" evidence=IDA

GO:0005938 "cell cortex" evidence=IEA;IDA

GO:0032060 "bleb assembly" evidence=IMP

GO:0006935 "chemotaxis" evidence=IMP

GO:0008104 "protein localization" evidence=IMP

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0030038 "contractile actin filament bundle assembly" evidence=IMP

GO:0046847 "filopodium assembly" evidence=IMP

GO:0003774 "motor activity" evidence=IEA;IDA

GO:0001931 "uropod" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA;IDA

GO:0030554 "adenyl nucleotide binding" evidence=IDA

GO:0006928 "cellular component movement" evidence=IGI;IMP

GO:0005826 "actomyosin contractile ring" evidence=IDA

GO:0032154 "cleavage furrow" evidence=IDA

GO:0031143 "pseudopodium" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0031154 "culmination involved in sorocarp development" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0045179 "apical cortex" evidence=IDA

GO:0016459 "myosin complex" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0031254 "trailing edge" evidence=IDA

GO:0042641 "actomyosin" evidence=IDA

GO:0032982 "myosin filament" evidence=IDA

GO:0031034 "myosin filament assembly" evidence=IDA

GO:0016460 "myosin II complex" evidence=IDA

GO:0044351 "macropinocytosis" evidence=RCA

MGI|MGI:1339712 Myh8 "myosin, heavy polypeptide 8, skeletal muscle, perinatal" [Mus musculus (taxid:10090)]

 Score = 123 (48.4 bits), Expect = 0.00072, P = 0.00072
 Identities = 76/315 (24%), Positives = 138/315 (43%)

Query:    31 EKSSLTSV--KTPLISISSTKQLKITEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEED 88
             EK +L S   ++   S    ++LK      +   N L+ + ++SR  C ++    + EE+
Sbjct:  1296 EKDALVSQLSRSKQASTQQIEELKRQLEEETKAKNALAHALQSSRHDCDLL--REQYEEE 1353

Query:    89 QSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWR-KY---LVFR-EDWNKYRESFYNRCR 143
             Q  K  AE   L +   K      N +  V QWR KY    + R E+  + ++    R +
Sbjct:  1354 QEGK--AE---LQRALSKA-----NSE--VAQWRTKYETDAIQRTEELEEAKKKLAQRLQ 1401

Query:   144 TRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGE 203
               A EE    +  K  SL +  +++ +E+E   +L+ +++ +     A + +++++F   
Sbjct:  1402 --AAEEHVEAVNAKCASLEKTKQRLQNEVE---DLMIDVERTNAAC-AALDKKQRNFDKV 1455

Query:   204 FFRYLSLVSETHDSLEDCDAVAR-LATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSP 262
                +     ET   LE C   +R L+T      +AY+++L+H+ETL          ++  
Sbjct:  1456 LSEWRQKYEETQAELESCQKESRTLSTELFKVKNAYEESLDHLETLRRENKNLQQEISDL 1515

Query:   263 SVDVA--CEKIKSLAKAKELDSSLILLINGAWASAKAS-QTMKNEVKDIMYCLYKATKSS 319
             +  +A   + I  L K K+        I  A   A+AS +  + ++  I   L +     
Sbjct:  1516 TEQIAEGGKHIHELEKIKKQVEQEKCEIQAALEEAEASLEHEEGKILRIQLELNQVKSEI 1575

Query:   320 LRGIAPK--EIKLLK 332
              R IA K  EI  LK
Sbjct:  1576 DRKIAEKDEEIDQLK 1590


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.127   0.351    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      367       367   0.00084  117 3  11 23  0.42    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  231 KB (2127 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.48u 0.11s 39.59t   Elapsed:  00:00:02
  Total cpu time:  39.48u 0.11s 39.59t   Elapsed:  00:00:02
  Start:  Tue May 21 01:29:39 2013   End:  Tue May 21 01:29:41 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016459 "myosin complex" evidence=IDA

GO:0032982 "myosin filament" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84WN0	Y4920_ARATH	No assigned EC number	0.7281	0.8228	0.7072	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh1_pm.C_scaffold_7000208 annotation not avaliable (643 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	367
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 3e-06
 Identities = 62/386 (16%), Positives = 126/386 (32%), Gaps = 87/386 (22%)

Query: 5   LLPIRSRTMSNLLSFELAISTPKSALEK---SSL--------TSVKTPLISISSTKQLKI 53
           ++  +      L  F   +S  +  ++K     L        + +KT     S   ++ I
Sbjct: 54  IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 54  TEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVA----EGYTLTQFCDK--- 106
            +    +  N + + +  SR     +     + E +  K V      G        K   
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQP-YLKLRQALLELRPAKNVLIDGVLG------SGKTWV 166

Query: 107 IIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVK 166
            +DV L+ K  V+    + +F   W   +      C +    E+   M +KL+       
Sbjct: 167 ALDVCLSYK--VQCKMDFKIF---WLNLK-----NCNS---PETVLEMLQKLLY------ 207

Query: 167 KIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFR--YLSLVSETHDSLEDCDAV 224
           +ID    S  +    I      I+++ A  R+    + +    L L      ++++  A 
Sbjct: 208 QIDPNWTSRSDHSSNI---KLRIHSIQAELRRLLKSKPYENCLLVL-----LNVQNAKAW 259

Query: 225 ARLATRC--------------LSAVSAYDKTLEHV-ETLDSAQAK--FDDILNSPSVDVA 267
                 C              LSA +    +L+H   TL   + K      L+       
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD------- 312

Query: 268 CEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMY-CLYKATKSSLRGIAPK 326
             + + L +  E+ ++    ++    S +      +  K +    L    +SSL  + P 
Sbjct: 313 -CRPQDLPR--EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 327 EIKLLKYLLNIID-----PEERFSAL 347
           E + +   L++       P    S +
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTILLSLI 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00