Citrus Sinensis ID: 017786

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
MELAASVSHGHGSSSFLHGSAKPKLNSASALFTGAPLSLSPSSTGRQARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
cccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcccccccccccccEEEEEEEEEEccEEccccccEEcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccccccEEEcccccccccccEEEcccccEEEcccccccccccEEEEEccccEEEEEcc
cccEEEEccccccccccccccccHHccHcHcccccccccccccccccccccccEEEEcccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccEEccccHHHcccccEEEEccEEEcccccccEcccccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHccccEEcccccEEEccccccEEEEEcccccccccEcccccEEEEccEEEcccccEEEccccccEEEcccccEEEcEEEEEEEccEEEEcccc
melaasvshghgsssflhgsakpklnsasalftgaplslspsstgrqarcpnKLVVHAKRISGLEEAMRIRRERELQTTtkfrkrpplrrgrvsprlpvpdhipkppyvsstslpdlspeyqihdsESIAKMRAACELAARVLDAAgklvrpsvttnEIDKAVHQMIIEagaypsplgyggfpksvctsvnecmchgipdsrqlqdgdiinIDVTVYLngyhgdtsktflcgnvsdGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVghgvgkvfhsepiiyhnrnenpgcmvegqtftiepiltmgsiecitwpdnwttltadgnpaaqfeHTILITRTGAEILTIC
melaasvshghgsssfLHGSAKPKLNSASALFTGAPLslspsstgrqarcpnKLVVHAKRISGLEEAMRIRrerelqtttkfrkrpplrrgrvsprlpvpdhipkppyvsstslpDLSPEYQIHDSESIAKMRAACELAARVLDaagklvrpsvttnEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPdsrqlqdgdIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGiavckdgasfKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
MELaasvshghgsssflhgsaKPKLNSASALFTGAPLSLSPSSTGRQARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
******************************************************VV*************************************************************************AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI*
*****************************************SSTGRQARCPNKLVVHAKRISG******************FRKRPPLRRGRVSPRLPVPDHIPKPPYVSST**********IHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
********************AKPKLNSASALFTGAPLSL*********RCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
************S***LHGSAKPKLNSASALFTGAPLSLSPSSTGRQARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MELAASVSHGHGSSSFLHGSAKPKLNSASALFTGAPLSLSPSSTGRQARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query366 2.2.26 [Sep-21-2011]
Q9FV52369 Methionine aminopeptidase yes no 0.923 0.915 0.776 1e-155
Q9FV51344 Methionine aminopeptidase no no 0.814 0.866 0.727 1e-126
Q9FV50350 Methionine aminopeptidase no no 0.836 0.874 0.624 1e-107
Q54VU7404 Methionine aminopeptidase yes no 0.803 0.727 0.506 1e-80
Q6UB28335 Methionine aminopeptidase yes no 0.743 0.811 0.547 2e-80
Q9CPW9335 Methionine aminopeptidase yes no 0.836 0.913 0.495 7e-80
Q9SLN5398 Methionine aminopeptidase no no 0.767 0.706 0.498 6e-77
Q4VBS4338 Methionine aminopeptidase yes no 0.833 0.902 0.479 2e-76
P53582386 Methionine aminopeptidase no no 0.767 0.727 0.482 4e-73
A6QLA4386 Methionine aminopeptidase yes no 0.767 0.727 0.482 5e-73
>sp|Q9FV52|AMP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2 Back     alignment and function desciption
 Score =  546 bits (1408), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/340 (77%), Positives = 293/340 (86%), Gaps = 2/340 (0%)

Query: 29  SALFTGAPLSLSPSSTG--RQARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRP 86
           S  F GAP++ S  S    + +  P +  V AK++SGLEEA+RIR+ REL+T +K R+ P
Sbjct: 30  SRCFLGAPVTSSSLSLSGKKNSYSPRQFHVSAKKVSGLEEAIRIRKMRELETKSKVRRNP 89

Query: 87  PLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAA 146
           PLRRGRVSPRL VPDHIP+PPYV S  LPD+S E+QI   E IAKMRAACELAARVL+ A
Sbjct: 90  PLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYA 149

Query: 147 GKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQD 206
           G LV+PSVTTNEIDKAVH MIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ 
Sbjct: 150 GTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQS 209

Query: 207 GDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIG 266
           GDIINIDVTVYL+GYHGDTS+TF CG V +G KRLVKVTEECLE+GIAVCKDGASFKKIG
Sbjct: 210 GDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGIAVCKDGASFKKIG 269

Query: 267 KRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGS 326
           KRISEHAEK+G+ VVERFVGHGVG VFHSEP+IYH RN+ PG MVEGQTFTIEPILT+G+
Sbjct: 270 KRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGLMVEGQTFTIEPILTIGT 329

Query: 327 IECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 366
            EC+TWPDNWTTLTADG  AAQFEHTILITRTG+EILT C
Sbjct: 330 TECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
Removes the N-terminal methionine from nascent proteins.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8
>sp|Q9FV51|AMP1C_ARATH Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2 Back     alignment and function description
>sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1 Back     alignment and function description
>sp|Q54VU7|AMP1D_DICDI Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=metap1d PE=3 SV=1 Back     alignment and function description
>sp|Q6UB28|AMP1D_HUMAN Methionine aminopeptidase 1D, mitochondrial OS=Homo sapiens GN=METAP1D PE=1 SV=1 Back     alignment and function description
>sp|Q9CPW9|AMP1D_MOUSE Methionine aminopeptidase 1D, mitochondrial OS=Mus musculus GN=Metap1d PE=2 SV=1 Back     alignment and function description
>sp|Q9SLN5|AMP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=2 SV=1 Back     alignment and function description
>sp|Q4VBS4|AMP1D_DANRE Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=metap1d PE=2 SV=1 Back     alignment and function description
>sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 Back     alignment and function description
>sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query366
255566855365 methionine aminopeptidase, putative [Ric 0.918 0.920 0.846 1e-169
449498639369 PREDICTED: methionine aminopeptidase 1B, 0.909 0.902 0.823 1e-162
449458896369 PREDICTED: methionine aminopeptidase 1B, 0.909 0.902 0.820 1e-162
356495984366 PREDICTED: methionine aminopeptidase 1B, 0.978 0.978 0.759 1e-161
224099327299 predicted protein [Populus trichocarpa] 0.816 1.0 0.896 1e-159
356499713366 PREDICTED: methionine aminopeptidase 1B, 0.915 0.915 0.804 1e-158
297844232369 hypothetical protein ARALYDRAFT_471483 [ 0.923 0.915 0.785 1e-156
225423897368 PREDICTED: methionine aminopeptidase 1B, 0.991 0.986 0.779 1e-155
357488339364 Methionine aminopeptidase [Medicago trun 0.874 0.879 0.821 1e-154
15222218369 methionine aminopeptidase 1B [Arabidopsi 0.923 0.915 0.776 1e-153
>gi|255566855|ref|XP_002524411.1| methionine aminopeptidase, putative [Ricinus communis] gi|223536372|gb|EEF38022.1| methionine aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  598 bits (1543), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 287/339 (84%), Positives = 309/339 (91%), Gaps = 3/339 (0%)

Query: 31  LFTGAPLSLSPSS--TGRQARCPNKLVVHAKRISGLEEAMRIRREREL-QTTTKFRKRPP 87
           LFTG PL++SP++  TG+Q      LVV +K+ISGL+EAMRIRREREL Q+  K RKR P
Sbjct: 27  LFTGLPLTISPATRTTGKQLVSSKSLVVFSKKISGLQEAMRIRRERELLQSNVKLRKRLP 86

Query: 88  LRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAG 147
           LRRGRVSPRLPVP+ I KPPYV S  LP+LS E+Q HDSE IAKM AACELAARVL+AAG
Sbjct: 87  LRRGRVSPRLPVPEDIQKPPYVGSNILPELSSEHQFHDSEGIAKMTAACELAARVLNAAG 146

Query: 148 KLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDG 207
           KLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDG
Sbjct: 147 KLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDG 206

Query: 208 DIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGK 267
           DIINIDVTVYLNGYHGDTSKTFLCGNVSD L+RLVKVTEEC+E+GIAVCKDGASFKKIGK
Sbjct: 207 DIINIDVTVYLNGYHGDTSKTFLCGNVSDSLQRLVKVTEECMERGIAVCKDGASFKKIGK 266

Query: 268 RISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSI 327
           RISEHAEKYG+GVVERFVGHGVG VFHS+PII H+RN+ PG MVEGQTFTIEPILTMGSI
Sbjct: 267 RISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNDMPGTMVEGQTFTIEPILTMGSI 326

Query: 328 ECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 366
           EC+TWPDNWTTLTADG+PAAQFEHTILITRTGAEILT C
Sbjct: 327 ECVTWPDNWTTLTADGSPAAQFEHTILITRTGAEILTKC 365

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449498639|ref|XP_004160592.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449458896|ref|XP_004147182.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356495984|ref|XP_003516850.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224099327|ref|XP_002311439.1| predicted protein [Populus trichocarpa] gi|222851259|gb|EEE88806.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356499713|ref|XP_003518681.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297844232|ref|XP_002889997.1| hypothetical protein ARALYDRAFT_471483 [Arabidopsis lyrata subsp. lyrata] gi|297335839|gb|EFH66256.1| hypothetical protein ARALYDRAFT_471483 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225423897|ref|XP_002278748.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic [Vitis vinifera] gi|297737860|emb|CBI27061.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357488339|ref|XP_003614457.1| Methionine aminopeptidase [Medicago truncatula] gi|355515792|gb|AES97415.1| Methionine aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15222218|ref|NP_172785.1| methionine aminopeptidase 1B [Arabidopsis thaliana] gi|85700448|sp|Q9FV52.2|AMP1B_ARATH RecName: Full=Methionine aminopeptidase 1B, chloroplastic; Short=MAP 1B; Short=MetAP 1B; AltName: Full=Peptidase M 1B; Flags: Precursor gi|9958075|gb|AAG09564.1|AC011810_23 Putative methionine aminopeptidase [Arabidopsis thaliana] gi|23306398|gb|AAN17426.1| methionine aminopeptidase I (MAP1), putative [Arabidopsis thaliana] gi|24899771|gb|AAN65100.1| methionine aminopeptidase I (MAP1), putative [Arabidopsis thaliana] gi|332190872|gb|AEE28993.1| methionine aminopeptidase 1B [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query366
TAIR|locus:2205329369 MAP1C "methionine aminopeptida 0.923 0.915 0.782 3.3e-143
TAIR|locus:2085979344 MAP1B "methionine aminopeptida 0.830 0.883 0.718 6.4e-115
TAIR|locus:2115125350 MAP1D "methionine aminopeptida 0.836 0.874 0.624 5.6e-100
UNIPROTKB|F1MKP7331 METAP1D "Methionine aminopepti 0.836 0.924 0.501 2.4e-76
UNIPROTKB|F1P5C7320 METAP1D "Methionine aminopepti 0.743 0.85 0.544 3.9e-76
UNIPROTKB|F1PFF1451 METAP1D "Methionine aminopepti 0.833 0.676 0.503 6.3e-76
UNIPROTKB|Q6UB28335 METAP1D "Methionine aminopepti 0.836 0.913 0.498 6.3e-76
DICTYBASE|DDB_G0280127404 map1d "methionine aminopeptida 0.833 0.754 0.5 1.7e-75
MGI|MGI:1913809335 Metap1d "methionyl aminopeptid 0.743 0.811 0.551 2.7e-75
RGD|1307413334 Metap1d "methionyl aminopeptid 0.743 0.814 0.544 9.3e-75
TAIR|locus:2205329 MAP1C "methionine aminopeptidase 1B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1400 (497.9 bits), Expect = 3.3e-143, P = 3.3e-143
 Identities = 266/340 (78%), Positives = 296/340 (87%)

Query:    29 SALFTGAPL-SLSPSSTGRQ-ARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRP 86
             S  F GAP+ S S S +G++ +  P +  V AK++SGLEEA+RIR+ REL+T +K R+ P
Sbjct:    30 SRCFLGAPVTSSSLSLSGKKNSYSPRQFHVSAKKVSGLEEAIRIRKMRELETKSKVRRNP 89

Query:    87 PLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAA 146
             PLRRGRVSPRL VPDHIP+PPYV S  LPD+S E+QI   E IAKMRAACELAARVL+ A
Sbjct:    90 PLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYA 149

Query:   147 GKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQD 206
             G LV+PSVTTNEIDKAVH MIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ 
Sbjct:   150 GTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQS 209

Query:   207 GDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIG 266
             GDIINIDVTVYL+GYHGDTS+TF CG V +G KRLVKVTEECLE+GIAVCKDGASFKKIG
Sbjct:   210 GDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGIAVCKDGASFKKIG 269

Query:   267 KRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGS 326
             KRISEHAEK+G+ VVERFVGHGVG VFHSEP+IYH RN+ PG MVEGQTFTIEPILT+G+
Sbjct:   270 KRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGLMVEGQTFTIEPILTIGT 329

Query:   327 IECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 366
              EC+TWPDNWTTLTADG  AAQFEHTILITRTG+EILT C
Sbjct:   330 TECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008235 "metalloexopeptidase activity" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA;TAS
GO:0009987 "cellular process" evidence=IEA
GO:0005739 "mitochondrion" evidence=TAS
GO:0031365 "N-terminal protein amino acid modification" evidence=TAS
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
TAIR|locus:2085979 MAP1B "methionine aminopeptidase 1C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115125 MAP1D "methionine aminopeptidase 1D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1MKP7 METAP1D "Methionine aminopeptidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P5C7 METAP1D "Methionine aminopeptidase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PFF1 METAP1D "Methionine aminopeptidase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q6UB28 METAP1D "Methionine aminopeptidase 1D, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280127 map1d "methionine aminopeptidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:1913809 Metap1d "methionyl aminopeptidase type 1D (mitochondrial)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1307413 Metap1d "methionyl aminopeptidase type 1D (mitochondrial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4VBS4AMP1D_DANRE3, ., 4, ., 1, 1, ., 1, 80.47970.83330.9023yesno
Q9CPW9AMP1D_MOUSE3, ., 4, ., 1, 1, ., 1, 80.49520.83600.9134yesno
Q54VU7AMP1D_DICDI3, ., 4, ., 1, 1, ., 1, 80.50660.80320.7277yesno
Q9FV52AMP1B_ARATH3, ., 4, ., 1, 1, ., 1, 80.77640.92340.9159yesno
Q9FV51AMP1C_ARATH3, ., 4, ., 1, 1, ., 1, 80.72750.81420.8662nono
Q6UB28AMP1D_HUMAN3, ., 4, ., 1, 1, ., 1, 80.54770.74310.8119yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.180.979
3rd Layer3.4.110.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 1e-135
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 1e-122
PLN03158396 PLN03158, PLN03158, methionine aminopeptidase; Pro 1e-118
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 1e-106
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 1e-106
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 8e-97
PRK12318291 PRK12318, PRK12318, methionine aminopeptidase; Pro 2e-85
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 1e-59
PRK12897248 PRK12897, PRK12897, methionine aminopeptidase; Rev 2e-53
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 7e-44
PRK07281286 PRK07281, PRK07281, methionine aminopeptidase; Rev 1e-35
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 7e-34
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 4e-31
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 1e-30
TIGR00501295 TIGR00501, met_pdase_II, methionine aminopeptidase 6e-26
cd01088291 cd01088, MetAP2, Methionine Aminopeptidase 2 3e-25
cd01087243 cd01087, Prolidase, Prolidase 4e-12
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 1e-09
PRK10879438 PRK10879, PRK10879, proline aminopeptidase P II; P 2e-07
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 2e-06
cd01090228 cd01090, Creatinase, Creatine amidinohydrolase 6e-06
TIGR00495 389 TIGR00495, crvDNA_42K, 42K curved DNA binding prot 7e-06
PTZ00053470 PTZ00053, PTZ00053, methionine aminopeptidase 2; P 7e-06
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 2e-04
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 3e-04
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information 
 Score =  384 bits (990), Expect = e-135
 Identities = 128/237 (54%), Positives = 163/237 (68%), Gaps = 1/237 (0%)

Query: 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCT 188
           I  MR A  + A VLD   K ++P VTT E+D+  H+ I E GAYP+PLGY GFPKS+CT
Sbjct: 1   IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICT 60

Query: 189 SVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEEC 248
           SVNE +CHGIPD R L+DGDI+NIDV V L+GYHGD+++TF+ G VS+  K+LV+VTEE 
Sbjct: 61  SVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEA 120

Query: 249 LEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEP-IIYHNRNENP 307
           L KGI   K G     IG  I ++AEK G+ VV  F GHG+G+ FH EP I  + R    
Sbjct: 121 LYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHGIGRKFHEEPQIPNYGRPGTG 180

Query: 308 GCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILT 364
             +  G  FTIEP++ +G+ E +T PD WT +T DG+ +AQFEHT+LIT  G EILT
Sbjct: 181 PKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILT 237

E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. Length = 238
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|215607 PLN03158, PLN03158, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|183434 PRK12318, PRK12318, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II Back     alignment and domain information
>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238523 cd01090, Creatinase, Creatine amidinohydrolase Back     alignment and domain information
>gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein Back     alignment and domain information
>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 366
KOG2738369 consensus Putative methionine aminopeptidase [Post 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 100.0
PRK09795361 aminopeptidase; Provisional 100.0
PRK15173323 peptidase; Provisional 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
PRK14575406 putative peptidase; Provisional 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 100.0
PRK13607443 proline dipeptidase; Provisional 100.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 100.0
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 100.0
PTZ00053470 methionine aminopeptidase 2; Provisional 100.0
PRK08671291 methionine aminopeptidase; Provisional 100.0
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 100.0
cd01091243 CDC68-like Related to aminopeptidase P and aminope 100.0
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 100.0
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 100.0
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 100.0
cd01066207 APP_MetAP A family including aminopeptidase P, ami 100.0
KOG2414488 consensus Putative Xaa-Pro aminopeptidase [Amino a 100.0
KOG2737492 consensus Putative metallopeptidase [General funct 100.0
KOG1189 960 consensus Global transcriptional regulator, cell d 99.91
KOG2413606 consensus Xaa-Pro aminopeptidase [Amino acid trans 99.86
KOG2775397 consensus Metallopeptidase [General function predi 99.86
KOG2776398 consensus Metallopeptidase [General function predi 99.8
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 99.64
cd01086 238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 97.45
PLN03158 396 methionine aminopeptidase; Provisional 97.42
cd01066207 APP_MetAP A family including aminopeptidase P, ami 97.28
cd01088 291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 97.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 96.98
PRK05716252 methionine aminopeptidase; Validated 96.93
PRK12896 255 methionine aminopeptidase; Reviewed 96.9
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 96.82
PRK15173323 peptidase; Provisional 96.71
KOG2738 369 consensus Putative methionine aminopeptidase [Post 96.68
COG0024 255 Map Methionine aminopeptidase [Translation, riboso 96.62
PRK08671291 methionine aminopeptidase; Provisional 96.6
PRK14575406 putative peptidase; Provisional 96.57
PRK12897248 methionine aminopeptidase; Reviewed 96.56
PRK14576405 putative endopeptidase; Provisional 96.52
cd01091243 CDC68-like Related to aminopeptidase P and aminope 96.48
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 96.4
PRK09795361 aminopeptidase; Provisional 96.33
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 96.29
PRK12318291 methionine aminopeptidase; Provisional 96.28
PRK07281286 methionine aminopeptidase; Reviewed 96.19
TIGR00495 389 crvDNA_42K 42K curved DNA binding protein. Protein 96.16
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 96.15
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 96.06
TIGR00501 295 met_pdase_II methionine aminopeptidase, type II. M 95.97
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 95.91
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 95.21
PTZ00053470 methionine aminopeptidase 2; Provisional 94.73
PRK10879438 proline aminopeptidase P II; Provisional 93.43
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 91.0
PRK13607443 proline dipeptidase; Provisional 89.47
KOG2776 398 consensus Metallopeptidase [General function predi 80.94
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.6e-87  Score=610.20  Aligned_cols=298  Identities=62%  Similarity=1.041  Sum_probs=284.9

Q ss_pred             HHHhhhhhcccCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCC----CCCCc-cccCCCHHHHHHHHHHHHHHHHH
Q 017786           68 MRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL----PDLSP-EYQIHDSESIAKMRAACELAARV  142 (366)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~----~~l~~-~R~iKs~~EI~~~R~A~~ia~~~  142 (366)
                      ..+++++++++++.|.|+++||||++||+++||++|++|+|++.+.+    +.... ...|+++++|+.||+||+|++++
T Consensus        56 ~~~~~~g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~Larev  135 (369)
T KOG2738|consen   56 LRIRKEGQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREV  135 (369)
T ss_pred             hhhhhhccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHH
Confidence            44566678889999999999999999999999999999999998543    22322 45789999999999999999999


Q ss_pred             HHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeccccCcEE
Q 017786          143 LDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYH  222 (366)
Q Consensus       143 l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~  222 (366)
                      |++|..+++||+|++||++++|++++++|+|||++||++||+++|+|+|+++|||+|+.|+||+||+|+||++++++|||
T Consensus       136 Ld~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyH  215 (369)
T KOG2738|consen  136 LDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYH  215 (369)
T ss_pred             HHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeeccCCccccCCccccC
Q 017786          223 GDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHN  302 (366)
Q Consensus       223 ~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~  302 (366)
                      +|+++||+||+++++.++|+++++||++.||+.+|||+++++|++.|++++.++||++++.|+|||||..||..|.|.||
T Consensus       216 GDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHy  295 (369)
T KOG2738|consen  216 GDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHY  295 (369)
T ss_pred             CccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC-CCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCceEeCCC
Q 017786          303 RN-ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI  365 (366)
Q Consensus       303 ~~-~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT~  365 (366)
                      .+ +..++|++||+||||||++.|.++..+|+|+||++|+||+.+||||||+|||++|+||||+
T Consensus       296 a~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~  359 (369)
T KOG2738|consen  296 AKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTK  359 (369)
T ss_pred             cccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhc
Confidence            76 4789999999999999999999999999999999999999999999999999999999996

>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2737 consensus Putative metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
4fli_A326 Human Metap1 With Bengamide Analog Y16, In Mn Form 4e-74
2b3h_A329 Crystal Structure Of Human Methionine Aminopeptidas 4e-74
2g6p_A304 Crystal Structure Of Truncated (Delta 1-89) Human M 6e-74
4fuk_A337 Aminopeptidase From Trypanosoma Brucei Length = 337 2e-72
3iu7_A288 M. Tuberculosis Methionine Aminopeptidase With Mn I 8e-69
1y1n_A291 Identification Of Sh3 Motif In M. Tuberculosis Meth 8e-69
3pka_A285 M. Tuberculosis Metap With Bengamide Analog Y02, In 8e-69
3ror_A291 Crystal Structure Of C105s Mutant Of Mycobacterium 8e-68
3s6b_A368 Crystal Structure Of Methionine Aminopeptidase 1b F 8e-68
3mx6_A262 Crystal Structure Of Methionine Aminopeptidase From 9e-61
3mr1_A252 Crystal Structure Of Methionine Aminopeptidase From 1e-60
2p99_A261 E. Coli Methionine Aminopeptidase Monometalated Wit 8e-55
2p98_A262 E. Coli Methionine Aminopeptidase Monometalated Wit 8e-55
2gg0_A263 Novel Bacterial Methionine Aminopeptidase Inhibitor 9e-55
4a6v_A265 X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn 9e-55
3mat_A265 E.coli Methionine Aminopeptidase Transition-state I 9e-55
2gu4_A263 E. Coli Methionine Aminopeptidase In Complex With N 9e-55
2gtx_A261 Structural Basis Of Catalysis By Mononuclear Methio 9e-55
4mat_A278 E.Coli Methionine Aminopeptidase His79ala Mutant Le 9e-55
1xnz_A264 Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio 1e-54
2mat_A264 E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re 1e-54
1c27_A263 E. Coli Methionine Aminopeptidase:norleucine Phosph 1e-54
3tav_A286 Crystal Structure Of A Methionine Aminopeptidase Fr 3e-41
1o0x_A262 Crystal Structure Of Methionine Aminopeptidase (Tm1 1e-40
3tb5_A264 Crystal Structure Of The Enterococcus Faecalis Meth 2e-37
1qxw_A252 Crystal Structure Of Staphyloccocus Aureus In Compl 2e-33
2dfi_A301 Crystal Structure Of Pf-Map(1-292)-C Length = 301 3e-21
1xgs_A295 Methionine Aminopeptidase From Hyperthermophile Pyr 3e-21
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 9e-13
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 7e-12
1wy2_A351 Crystal Structure Of The Prolidase From Pyrococcus 8e-12
1wn1_A356 Crystal Structure Of Dipeptiase From Pyrococcus Hor 1e-11
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 4e-11
4ege_A378 Crystal Structure Of Dipeptidase Pepe From Mycobact 1e-09
4fkc_A377 Recombinant Prolidase From Thermococcus Sibiricus L 2e-09
2v3z_A440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 2e-08
1wl9_A440 Structure Of Aminopeptidase P From E. Coli Length = 2e-08
2bwv_A440 His361ala Escherichia Coli Aminopeptidase P Length 2e-08
1jaw_A440 Aminopeptidase P From E. Coli Low Ph Form Length = 6e-08
2bwy_A440 Glu383ala Escherichia Coli Aminopeptidase P Length 6e-08
1m35_A440 Aminopeptidase P From Escherichia Coli Length = 440 6e-08
2bww_A440 His350ala Escherichia Coli Aminopeptidase P Length 6e-08
2bws_A440 His243ala Escherichia Coli Aminopeptidase P Length 3e-07
2bwt_A440 Asp260ala Escherichia Coli Aminopeptidase P Length 5e-07
2bwu_A440 Asp271ala Escherichia Coli Aminopeptidase P Length 5e-07
2bwx_A441 His354ala Escherichia Coli Aminopeptidase P Length 5e-07
2v6c_A353 Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) 2e-05
3j2i_A 394 Structure Of Late Pre-60s Ribosomal Subunits With N 5e-05
2q8k_A 401 The Crystal Structure Of Ebp1 Length = 401 5e-05
1chm_A401 Enzymatic Mechanism Of Creatine Amidinohydrolase As 1e-04
1chm_B401 Enzymatic Mechanism Of Creatine Amidinohydrolase As 1e-04
>pdb|4FLI|A Chain A, Human Metap1 With Bengamide Analog Y16, In Mn Form Length = 326 Back     alignment and structure 
Iteration: 1

 Score =  274 bits (701), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 142/294 (48%), Positives = 179/294 (60%), Gaps = 13/294 (4%)
Query: 79  TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVS-----STSLPDLSPEYQIH--DSESIAK 131
           T K R   PL      P  PVP +I +P Y       S S   L    QI    SE I  
Sbjct: 5   TGKLRPHYPL-----MPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEG 59
Query: 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN 191
           MR  C LA  VLD A  +++P VTT EID AVH   I    YPSPL Y  FPKS CTSVN
Sbjct: 60  MRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVN 119
Query: 192 ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEK 251
           E +CHGIPD R LQ+GDI+N+D+T+Y NGYHGD ++TF  G V DG ++LV+ T ECL +
Sbjct: 120 EVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQ 179
Query: 252 GIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHN-RNENPGCM 310
            I   K G  ++++G  I +HA+  GF VV  + GHG+ K+FH+ P + H  +N+  G M
Sbjct: 180 AIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVM 239
Query: 311 VEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILT 364
             G  FTIEP++  G  +  TWPD WT +T DG  +AQFEHT+L+T TG EILT
Sbjct: 240 KSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILT 293
>pdb|2B3H|A Chain A, Crystal Structure Of Human Methionine Aminopeptidase Type I With A Third Cobalt In The Active Site Length = 329 Back     alignment and structure
>pdb|2G6P|A Chain A, Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine Derivative Length = 304 Back     alignment and structure
>pdb|4FUK|A Chain A, Aminopeptidase From Trypanosoma Brucei Length = 337 Back     alignment and structure
>pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn Inhibitor A02 Length = 288 Back     alignment and structure
>pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis Methionine Aminopeptidase Suggests A Mode Of Interaction With The Ribosome Length = 291 Back     alignment and structure
>pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn Form Length = 285 Back     alignment and structure
>pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium Tuberculosis Methionine Aminopeptidase Length = 291 Back     alignment and structure
>pdb|3S6B|A Chain A, Crystal Structure Of Methionine Aminopeptidase 1b From Plasmodium Falciparum, Pf10_0150 Length = 368 Back     alignment and structure
>pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Bound To Methionine Length = 262 Back     alignment and structure
>pdb|3MR1|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Length = 252 Back     alignment and structure
>pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 Back     alignment and structure
>pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 Back     alignment and structure
>pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 Back     alignment and structure
>pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 Back     alignment and structure
>pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 Back     alignment and structure
>pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 Back     alignment and structure
>pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 Back     alignment and structure
>pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 Back     alignment and structure
>pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 Back     alignment and structure
>pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 Back     alignment and structure
>pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 Back     alignment and structure
>pdb|3TAV|A Chain A, Crystal Structure Of A Methionine Aminopeptidase From Mycobacterium Abscessus Length = 286 Back     alignment and structure
>pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 Back     alignment and structure
>pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 Back     alignment and structure
>pdb|1QXW|A Chain A, Crystal Structure Of Staphyloccocus Aureus In Complex With An Aminoketone Inhibitor 54135. Length = 252 Back     alignment and structure
>pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 Back     alignment and structure
>pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 Back     alignment and structure
>pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 Back     alignment and structure
>pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus Length = 377 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 Back     alignment and structure
>pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 Back     alignment and structure
>pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 Back     alignment and structure
>pdb|1CHM|A Chain A, Enzymatic Mechanism Of Creatine Amidinohydrolase As Deduced From Crystal Structures Length = 401 Back     alignment and structure
>pdb|1CHM|B Chain B, Enzymatic Mechanism Of Creatine Amidinohydrolase As Deduced From Crystal Structures Length = 401 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 1e-171
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 1e-169
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 1e-164
3mx6_A262 Methionine aminopeptidase; seattle structural geno 1e-133
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 1e-129
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 1e-125
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 1e-119
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 1e-118
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 1e-114
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 2e-67
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 3e-67
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 5e-04
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 2e-52
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 6e-51
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 8e-33
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 1e-32
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 2e-32
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 3e-32
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 5e-32
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 9e-32
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 2e-29
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 6e-26
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 8e-23
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 2e-20
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 5e-13
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 9e-13
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 1e-10
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 3e-10
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 7e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 Back     alignment and structure
 Score =  477 bits (1230), Expect = e-171
 Identities = 129/282 (45%), Positives = 172/282 (60%), Gaps = 2/282 (0%)

Query: 84  KRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVL 143
            R  L  G +SP  PVP+ I +P YV          E  +   E I KMR A  +AA  L
Sbjct: 3   SRTALSPGVLSPTRPVPNWIARPEYVG-KPAAQEGSEPWVQTPEVIEKMRVAGRIAAGAL 61

Query: 144 DAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQ 203
             AGK V P VTT+E+D+  H+ +++ GAYPS LGY GFPKS CTS+NE +CHGIPDS  
Sbjct: 62  AEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTV 121

Query: 204 LQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFK 263
           + DGDI+NIDVT Y+ G HGDT+ TF  G+V+D  + LV  T E   + I   K G +  
Sbjct: 122 ITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALS 181

Query: 264 KIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYH-NRNENPGCMVEGQTFTIEPIL 322
            IG+ I  +A ++G+ VV  F GHG+G  FH+  ++ H ++      M  G TFTIEP++
Sbjct: 182 VIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMI 241

Query: 323 TMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILT 364
            +G+++   W D WT +T D    AQFEHT+L+T TG EILT
Sbjct: 242 NLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILT 283
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query366
4fuk_A337 Methionine aminopeptidase; structural genomics con 100.0
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 100.0
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 100.0
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 99.91
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 97.03
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 96.39
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 96.2
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 96.09
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 96.08
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 96.04
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 96.02
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 95.99
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 95.82
4fuk_A 337 Methionine aminopeptidase; structural genomics con 95.82
1xgs_A 295 Methionine aminopeptidase; hyperthermophIle; 1.75A 95.79
3tb5_A 264 Methionine aminopeptidase; hydrolase, metalloprote 95.78
3tav_A 286 Methionine aminopeptidase; ssgcid, seattle structu 95.76
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 95.75
3mx6_A 262 Methionine aminopeptidase; seattle structural geno 95.73
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 95.71
2b3h_A 329 Methionine aminopeptidase 1; hydrolase, metallopro 95.63
3pka_A 285 Methionine aminopeptidase; hydrolase-hydrolase inh 95.51
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 95.43
3s6b_A 368 Methionine aminopeptidase; malaria, proteolysis, " 95.26
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 95.23
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 95.08
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 94.88
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 94.75
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 94.68
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 94.08
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 93.61
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 92.39
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 91.05
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 90.54
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 90.26
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 89.57
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 86.38
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
Probab=100.00  E-value=2e-71  Score=539.06  Aligned_cols=289  Identities=45%  Similarity=0.823  Sum_probs=270.2

Q ss_pred             cCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCC----------------CCCCCCccccCCCHHHHHHHHHHHHHHHH
Q 017786           78 TTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSST----------------SLPDLSPEYQIHDSESIAKMRAACELAAR  141 (366)
Q Consensus        78 ~~~~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~----------------~~~~l~~~R~iKs~~EI~~~R~A~~ia~~  141 (366)
                      .+++|+|+|+||||++||.+.||++|++|+|+...                ........|.|||++||++||+||+|+++
T Consensus         2 ~~~~~~~~g~~~p~~~sp~~~vP~~i~~p~y~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~   81 (337)
T 4fuk_A            2 AMKTFDFTGPLRPGKITPRRAVPSHILRPDYADRAGGVSASEEKDRGSKVKVYNIQFLHDDSKKTAEIQRIKTVCQLSRE   81 (337)
T ss_dssp             CEECCCCCSSCCCCCCCCCCCCCTTSCCCTTSSSTTCCCHHHHHHTTCCCCCCCCTTTTCTTC--CHHHHHHHHHHHHHH
T ss_pred             CccCcceecccccccCCCCCCCCCCCCCCCcccCCCCCCccccccccCccccccchhhcccCCCHHHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999998532                11233456899999999999999999999


Q ss_pred             HHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeccccCcE
Q 017786          142 VLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGY  221 (366)
Q Consensus       142 ~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY  221 (366)
                      +++++.+.++||+||.||++.+++++.++|+++++.+|.+||+++|+|.|++++|+.|++++|++||+|+||+|+.|+||
T Consensus        82 a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY  161 (337)
T 4fuk_A           82 VLDIATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGF  161 (337)
T ss_dssp             HHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE
T ss_pred             HHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeeccCCccccCCcccc
Q 017786          222 HGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYH  301 (366)
Q Consensus       222 ~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~  301 (366)
                      ++|++|||++|++++++++++++++++++++++++|||++++||++++++++++.||..+.+++|||||+.+|+.|.+.+
T Consensus       162 ~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~~~g~~~~~~~~GHGIG~~~he~p~~~~  241 (337)
T 4fuk_A          162 HGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSVVRTYTGHGVGHLFHTSPTVCH  241 (337)
T ss_dssp             EEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHHTTTCEECSSEEEEECSSSSSEEEEECC
T ss_pred             EEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhcCCcccCcccCCCCCccccCCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCC-CCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCceEeCCCC
Q 017786          302 NRN-ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC  366 (366)
Q Consensus       302 ~~~-~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT~~  366 (366)
                      +.+ +...+|++||||||||++|.+......|+|+||++|+||++|+|||||||||+||+|+||.+
T Consensus       242 ~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVTe~G~EvLT~~  307 (337)
T 4fuk_A          242 YANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVTNGGVEIFTDW  307 (337)
T ss_dssp             SCC---CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEECSSSEEESSCC
T ss_pred             cccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEcCCcCEECCCC
Confidence            643 45679999999999999999999999999999999999999999999999999999999974
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 366
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 2e-65
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 2e-53
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 1e-45
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 1e-41
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 6e-36
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 4e-34
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 5e-32
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 3e-31
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Escherichia coli [TaxId: 562]

 Score =  206 bits (524), Expect = 2e-65
 Identities = 110/246 (44%), Positives = 154/246 (62%), Gaps = 3/246 (1%)

Query: 122 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII-EAGAYPSPLGYG 180
            I   E I KMR A  LAA VL+     V+P V+T E+D+  +  I+ E  A  + LGY 
Sbjct: 2   SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYH 61

Query: 181 GFPKSVCTSVNECMCHGIP-DSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLK 239
           G+PKSVC S+NE +CHGIP D++ L+DGDI+NIDVTV  +G+HGDTSK F+ G  +   +
Sbjct: 62  GYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGE 121

Query: 240 RLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPII 299
           RL ++T+E L   + + K G + ++IG  I +  E  GF VV  + GHG+G+ FH EP +
Sbjct: 122 RLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQV 181

Query: 300 YHNRNENPGCMVE-GQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRT 358
            H  +     +++ G TFTIEP++  G  E  T  D WT  T D + +AQ+EHTI++T  
Sbjct: 182 LHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDN 241

Query: 359 GAEILT 364
           G EILT
Sbjct: 242 GCEILT 247
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query366
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 100.0
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 96.72
d1xgsa2 218 Methionine aminopeptidase {Archaeon Pyrococcus fur 96.44
d2gg2a1 262 Methionine aminopeptidase {Escherichia coli [TaxId 96.08
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 96.0
d1b6aa2 295 Methionine aminopeptidase {Human (Homo sapiens) [T 95.87
d2v3za2 264 Aminopeptidase P, C-terminal domain {Escherichia c 95.49
d1qxya_ 249 Methionine aminopeptidase {Staphylococcus aureus [ 94.82
d1o0xa_ 249 Methionine aminopeptidase {Thermotoga maritima [Ta 94.73
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.5e-54  Score=399.67  Aligned_cols=246  Identities=36%  Similarity=0.618  Sum_probs=231.8

Q ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCC
Q 017786          120 EYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP  199 (366)
Q Consensus       120 ~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p  199 (366)
                      +|.|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.+.+.++.+++..++.+.++...|+.+
T Consensus         1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (249)
T d1o0xa_           1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLP   80 (249)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCCCC
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhccccccccccccccCcccccceee
Confidence            58899999999999999999999999999999999999999999999999999988888888888888888888888765


Q ss_pred             -CCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC
Q 017786          200 -DSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF  278 (366)
Q Consensus       200 -~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~  278 (366)
                       +++.+++||+|.+|+++.++||++|++||+++|++++++++++++++++++++++.+|||++++||++++++++++.||
T Consensus        81 ~~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~~~~~~~g~  160 (249)
T d1o0xa_          81 LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF  160 (249)
T ss_dssp             CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTC
T ss_pred             ccccccccccceeeecceeecceecccccceeecCcChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhcCC
Confidence             6788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCceeeccCCccccCCccccCC-CCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeC
Q 017786          279 GVVERFVGHGVGKVFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR  357 (366)
Q Consensus       279 ~~~~~~~GHgIG~~~he~P~i~~~~-~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTe  357 (366)
                      ..+.+++|||||+.+|+.|.+.... .+++.+|++||||+|||++|.+......|+|+|++++.||.+++|+||||+||+
T Consensus       161 ~~~~~~~GHgiG~~~~~~p~~~~~~~~~~~~~le~gMv~~iEp~~~~~~~~~~~~e~~~~~~~~~g~~g~r~Ed~v~VTe  240 (249)
T d1o0xa_         161 NVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITE  240 (249)
T ss_dssp             EECCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEECS
T ss_pred             eeecCCcccccccCCCcCCccceeccCCCCccccCCeEEEecceeecCCCceEEccCCcEEEeeCCcceEEeceEEEEcC
Confidence            8788999999999999998765442 356789999999999999999999999999999999999999999999999999


Q ss_pred             CceEeCCC
Q 017786          358 TGAEILTI  365 (366)
Q Consensus       358 dG~EiLT~  365 (366)
                      ||+|+||+
T Consensus       241 ~G~e~LTk  248 (249)
T d1o0xa_         241 NGAEILTK  248 (249)
T ss_dssp             SSEEESSC
T ss_pred             CcCeeCCC
Confidence            99999996
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure