Citrus Sinensis ID: 018034


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
MGCGHLFYSTLVTFSVALITYNIIISANAPLKQDFPNPSSSSISVDPVIEMPLERSRRHGAAANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYGCDYDMKGHLTYGKIGEWRFDKRSYDSVPPPRNLPLPPPGVPESVVTLVKMVNEATANIPNWGS
cccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHcccccccccEEEEEEccccccccccHHHHHHHHHHHHccccccccccEEEEEccccccccccccEEEcccccccccccccccccHHHHHHHHHHccccccEEEEEcccEEEEccccccccccccEEEEcccccccccHHHHHHHccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEccccccccccccccEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEcccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccccccccEEEHccccccHHHcccccEEEcccccccccccEEcccHHHHHHHHHHccccccEEEEEcccEEEEcccccccccccccccccEEEccccHHHHHHHHccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccEccccEEEcccccccccccEEEEEEcccccccccccccccEcEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHccccccc
MGCGHLFYSTLVTFSVALITYNIIisanaplkqdfpnpssssisvdpviemplersrrhGAAANKRLFHTAMtasdsvynTWQCRVMYYWFkkfqngpnsemggftrilhsgkpdkymdeiptfiaqplpagmdqgyivlNRPWAFVQWLEKADIkeeyilmaepdhiivkpipnlskdglgaafpffyiepkkYESVLRKyfpkdmgpitnidpignspvvvgrdslkkiaPVWMNVSLamkkdpetdkAFGWVLEMYAYAVASALNGVgnilykdfmiqppwdtevsnKFIIHYTygcdydmkghltygkigewrfdkrsydsvppprnlplpppgvpeSVVTLVKMVNEAtanipnwgs
MGCGHLFYSTLVTFSVALITYNIIISANAPLKQDFPNPSSSSISVDPVIEMPLERSRRHGAAANKRLFHtamtasdsvyNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPitnidpignspvVVGRDSLKKIAPVWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYGCDYDMKGHLTYGKIGEWRFDKRSYDSVPpprnlplpppgVPESVVTLVKMVNEatanipnwgs
MGCGHLFYSTLVTFSVALITYNIIISANAPLKQDFPNPssssisVDPVIEMPLERSRRHGAAANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYGCDYDMKGHLTYGKIGEWRFDKRSYDSvppprnlplpppgvpesvvTLVKMVNEATANIPNWGS
**CGHLFYSTLVTFSVALITYNIIISANA************************************RLFHTAMTASDSVYNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYGCDYDMKGHLTYGKIGEWRFDK**********************VVTLVKMV************
****HLFYSTLVTFSVALITYNIIISANA***************VDPV********************HTAMTASDSVYNTWQCRVMYYWFK**************RILHSGKPDKYMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYGCDYDMKGHLTYGKIGEWRFDKRSYDSVPPPRNLPLPPPGVPESVVTLVKMVNEATANIPNW**
MGCGHLFYSTLVTFSVALITYNIIISANAPLKQDFPNPSSSSISVDPVIEMPLERSRRHGAAANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYGCDYDMKGHLTYGKIGEWRFDKRSYDSVPPPRNLPLPPPGVPESVVTLVKMVNEATANIPNWGS
*GCGHLFYSTLVTFSVALITYNIIISANAPLK**********ISVDPVIEMPLERS*****AANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYGCDYDMKGHLTYGKIGEWRFDKRSYDSVPPPRNLPLPPPGVPESVVTLVKMVNEATANIPNW**
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGCGHLFYSTLVTFSVALITYNIIISANAPLKQDFPNPSSSSISVDPVIEMPLERSRRHGAAANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYGCDYDMKGHLTYGKIGEWRFDKRSYDSVPPPRNLPLPPPGVPESVVTLVKMVNEATANIPNWGS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
224141933362 predicted protein [Populus trichocarpa] 0.997 0.997 0.876 0.0
449441888361 PREDICTED: uncharacterized protein LOC10 0.991 0.994 0.873 0.0
255557757359 conserved hypothetical protein [Ricinus 0.988 0.997 0.865 1e-179
224089306359 predicted protein [Populus trichocarpa] 0.988 0.997 0.856 1e-177
388516027360 unknown [Lotus japonicus] 0.988 0.994 0.815 1e-176
359806029365 uncharacterized protein LOC100783788 [Gl 1.0 0.991 0.821 1e-176
356552496363 PREDICTED: uncharacterized protein LOC10 0.997 0.994 0.826 1e-173
388500814360 unknown [Medicago truncatula] 0.986 0.991 0.8 1e-173
225430416364 PREDICTED: uncharacterized protein LOC10 0.997 0.991 0.832 1e-172
297812727367 hypothetical protein ARALYDRAFT_910571 [ 1.0 0.986 0.814 1e-171
>gi|224141933|ref|XP_002324315.1| predicted protein [Populus trichocarpa] gi|222865749|gb|EEF02880.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/363 (87%), Positives = 342/363 (94%), Gaps = 2/363 (0%)

Query: 1   MGCGHLFYSTLVTFSVALITYNIIISANAPLKQDFPNPSS-SSISVDPVIEMPLERSRRH 59
           MGCG+ F++ L+T SVALITYNI+ISANAPLKQD P PSS S++ VDPVI+MPLERSRR 
Sbjct: 1   MGCGNFFFTVLITLSVALITYNILISANAPLKQDLPGPSSRSTLLVDPVIKMPLERSRR- 59

Query: 60  GAAANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMD 119
            +   KRLFHTA+TASDSVYNTWQCRVMYYW+KK ++GPNSEMGGFTRILHSGKPDK+M+
Sbjct: 60  SSFGKKRLFHTAVTASDSVYNTWQCRVMYYWYKKHKDGPNSEMGGFTRILHSGKPDKFME 119

Query: 120 EIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKD 179
           EIPTFIAQPLPAGMDQGYIVLNRPWAFVQWL+K DIKE+YILMAEPDHIIVKPIPNLSKD
Sbjct: 120 EIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLQKTDIKEDYILMAEPDHIIVKPIPNLSKD 179

Query: 180 GLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVS 239
           GLGAAFPFFYIEPKKYESVLRKYFP+D GPITNIDPIGNSPV+VG++SLKKIAP WMNVS
Sbjct: 180 GLGAAFPFFYIEPKKYESVLRKYFPEDKGPITNIDPIGNSPVIVGKESLKKIAPTWMNVS 239

Query: 240 LAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTYG 299
           LAMKKDPETDKAFGWVLEMY YAV+SAL+GVGNILYKDFMIQPPWDTEV  KFIIHYTYG
Sbjct: 240 LAMKKDPETDKAFGWVLEMYGYAVSSALHGVGNILYKDFMIQPPWDTEVGKKFIIHYTYG 299

Query: 300 CDYDMKGHLTYGKIGEWRFDKRSYDSVPPPRNLPLPPPGVPESVVTLVKMVNEATANIPN 359
           CDYDMKG LTYGKIGEWRFDKRSYD+V PPRNLPLPPPGVPESVVTLVKMVNEATANIPN
Sbjct: 300 CDYDMKGKLTYGKIGEWRFDKRSYDTVIPPRNLPLPPPGVPESVVTLVKMVNEATANIPN 359

Query: 360 WGS 362
           WGS
Sbjct: 360 WGS 362




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441888|ref|XP_004138714.1| PREDICTED: uncharacterized protein LOC101214063 [Cucumis sativus] gi|449493329|ref|XP_004159257.1| PREDICTED: uncharacterized LOC101214063 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255557757|ref|XP_002519908.1| conserved hypothetical protein [Ricinus communis] gi|223540954|gb|EEF42512.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224089306|ref|XP_002308683.1| predicted protein [Populus trichocarpa] gi|222854659|gb|EEE92206.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388516027|gb|AFK46075.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|359806029|ref|NP_001241175.1| uncharacterized protein LOC100783788 [Glycine max] gi|255639667|gb|ACU20127.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356552496|ref|XP_003544603.1| PREDICTED: uncharacterized protein LOC100813136 [Glycine max] Back     alignment and taxonomy information
>gi|388500814|gb|AFK38473.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|225430416|ref|XP_002285410.1| PREDICTED: uncharacterized protein LOC100249264 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297812727|ref|XP_002874247.1| hypothetical protein ARALYDRAFT_910571 [Arabidopsis lyrata subsp. lyrata] gi|297320084|gb|EFH50506.1| hypothetical protein ARALYDRAFT_910571 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
TAIR|locus:504955105366 AT5G25265 "AT5G25265" [Arabido 1.0 0.989 0.765 1.5e-154
TAIR|locus:2059573358 AT2G25260 "AT2G25260" [Arabido 0.975 0.986 0.647 4.6e-128
TAIR|locus:2185046358 AT5G13500 "AT5G13500" [Arabido 0.953 0.963 0.602 1.6e-118
TAIR|locus:2082314 802 AT3G01720 "AT3G01720" [Arabido 0.646 0.291 0.25 1.3e-08
TAIR|locus:504955105 AT5G25265 "AT5G25265" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1507 (535.5 bits), Expect = 1.5e-154, P = 1.5e-154
 Identities = 280/366 (76%), Positives = 306/366 (83%)

Query:     1 MGCGH-LFYSTLVTFSVALITYNIIISANAPLKQDFPNPXXXXX-XVDPVIEMPLERSRR 58
             MGCG  LFY  L+T SVALITYNIIISANAPLKQ FP         +DPVIE+P     R
Sbjct:     1 MGCGGTLFYPLLITLSVALITYNIIISANAPLKQGFPGRSSSSDISIDPVIELPRGGGSR 60

Query:    59 HGAAANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQN--GPNSEMGGFTRILHSGKPDK 116
             +      RLFHTA+TASDSVYNTWQCRVMYYWFKK Q   GP SEMGGFTRILHSGKPD+
Sbjct:    61 NNDGKRIRLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPDQ 120

Query:   117 YMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNL 176
             YMDEIPTF+AQPLP+GMDQGY+VLNRPWAFVQWL++ DIKE+YILM+EPDHIIVKPIPNL
Sbjct:   121 YMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKEDYILMSEPDHIIVKPIPNL 180

Query:   177 SKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWM 236
             +KDGLGAAFPFFYIEPKKYE VLRKY+P+  GP+TNIDPIGNSPV+VG+D+LKKIAP WM
Sbjct:   181 AKDGLGAAFPFFYIEPKKYEKVLRKYYPEVRGPVTNIDPIGNSPVIVGKDALKKIAPTWM 240

Query:   237 NVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHY 296
             NVSLAMKKDPE DKAFGWVLEMYAYAV+SAL+GV NIL+KDFMIQPPWD EV +K+IIHY
Sbjct:   241 NVSLAMKKDPEADKAFGWVLEMYAYAVSSALHGVSNILHKDFMIQPPWDIEVGDKYIIHY 300

Query:   297 TYGCDYDMKGHLTYGKIGEWRFDKRSYDSXXXXXXXXXXXXXXXXXXXTLVKMVNEATAN 356
             TYGCDYDMKG LTYGKIGEWRFDKRSYDS                   TLVKM+NEATAN
Sbjct:   301 TYGCDYDMKGKLTYGKIGEWRFDKRSYDSKPPPRNLTMPPPGVSQSVVTLVKMINEATAN 360

Query:   357 IPNWGS 362
             IPNWGS
Sbjct:   361 IPNWGS 366




GO:0008150 "biological_process" evidence=ND
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2059573 AT2G25260 "AT2G25260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185046 AT5G13500 "AT5G13500" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082314 AT3G01720 "AT3G01720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 46/384 (11%), Positives = 101/384 (26%), Gaps = 136/384 (35%)

Query: 1   M-GCGHLFYSTLVT-------------FSVALITYNIIISANAPLKQ----------DFP 36
           + G G    + +               F +  +      S    L+           ++ 
Sbjct: 158 VLGSGK---TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214

Query: 37  NPSSSSISVDPVIEMPLERSRRHGAAANKRLFHTAMTASDSVYNTW-------QCRVMYY 89
           + S  S ++   I       RR       + +   +    +V N          C+++  
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLK---SKPYENCLLVLLNVQNAKAWNAFNLSCKILL- 270

Query: 90  WFKKFQNGPNSEMGGFTRILHSGKPDKY-MDEIPTFIAQPLPAGMDQGYIVLNRPWA--- 145
                           TR        K   D +       +   +D   + L        
Sbjct: 271 ---------------TTR-------FKQVTDFLSAATTTHIS--LDHHSMTLTPDEVKSL 306

Query: 146 FVQWLE--KADIKEEYILMAEPDHIIVKPIPNLSKDGLGAAFPFFYIEPKKYESVL---- 199
            +++L+    D+  E +L   P  + +  I    +DGL     + ++   K  +++    
Sbjct: 307 LLKYLDCRPQDLPRE-VLTTNPRRLSI--IAESIRDGLATWDNWKHVNCDKLTTIIESSL 363

Query: 200 --------RKY------FPKDMGPITNIDPI-------GNSPVVVGRDSLKKIAPVWMNV 238
                   RK       FP       +I P         +         + K+       
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPS----AHI-PTILLSLIWFDVIKSDVMVVVNKLH----KY 414

Query: 239 SLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQPPWDTEVSNKFIIHYTY 298
           SL  +K P+              ++ S        +Y +  ++   +  +    + HY  
Sbjct: 415 SLV-EKQPKE----------STISIPS--------IYLELKVKLENEYALHRSIVDHYNI 455

Query: 299 GCDYDMKG------------HLTY 310
              +D               H+ +
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGH 479


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00