Citrus Sinensis ID: 018623
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 353 | ||||||
| 224080776 | 585 | predicted protein [Populus trichocarpa] | 0.997 | 0.601 | 0.755 | 1e-160 | |
| 225428165 | 680 | PREDICTED: DUF246 domain-containing prot | 0.997 | 0.517 | 0.748 | 1e-159 | |
| 297744531 | 613 | unnamed protein product [Vitis vinifera] | 0.963 | 0.554 | 0.747 | 1e-158 | |
| 559921 | 569 | axi 1 [Nicotiana tabacum] | 0.963 | 0.597 | 0.711 | 1e-153 | |
| 224103067 | 560 | predicted protein [Populus trichocarpa] | 0.994 | 0.626 | 0.717 | 1e-152 | |
| 255586213 | 580 | conserved hypothetical protein [Ricinus | 0.968 | 0.589 | 0.755 | 1e-152 | |
| 449444409 | 604 | PREDICTED: DUF246 domain-containing prot | 0.974 | 0.569 | 0.729 | 1e-152 | |
| 224086024 | 574 | predicted protein [Populus trichocarpa] | 0.889 | 0.547 | 0.799 | 1e-150 | |
| 224061893 | 562 | predicted protein [Populus trichocarpa] | 0.946 | 0.594 | 0.734 | 1e-150 | |
| 357495627 | 580 | Auxin-independent growth promoter [Medic | 0.983 | 0.598 | 0.701 | 1e-147 |
| >gi|224080776|ref|XP_002306226.1| predicted protein [Populus trichocarpa] gi|222849190|gb|EEE86737.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/360 (75%), Positives = 309/360 (85%), Gaps = 8/360 (2%)
Query: 1 MRVPRKCSPKFYESHVLPILNKKHAIQLTKFDYRLANKLDTDLQKLRCRVNYHALKFTDP 60
MRVPRKC+P Y + VLP+LNKKH +QL KFDYRL+N+LD DLQKLRCRVNYHALKFTD
Sbjct: 212 MRVPRKCTPTCYLTKVLPVLNKKHVVQLGKFDYRLSNRLDPDLQKLRCRVNYHALKFTDT 271
Query: 61 IRHIGKMLVERMRLKTKHFIALHLRFEPDMLAFSGCYYGGGDEERTVLGALRKRWKSLHA 120
I +GK LV+RMR+K++HFIALHLRFEPDMLAFSGCY+GGG++ER LG +R+RWKSLHA
Sbjct: 272 ILEMGKKLVQRMRMKSEHFIALHLRFEPDMLAFSGCYFGGGEKERMELGKIRRRWKSLHA 331
Query: 121 SNPDKVRRHGRCPLTPEEVGLMLRALGFGSDVHLYIASGEVYGGRETLAPLKALFPNLHS 180
SNPDK RR GRCPLTPEEVGLMLRALGFGSDVHLY+ASGEVYGG ETLAPLKALFPN HS
Sbjct: 332 SNPDKERRQGRCPLTPEEVGLMLRALGFGSDVHLYVASGEVYGGEETLAPLKALFPNFHS 391
Query: 181 KETLASKYELEPFSSFSARMAALDFIVCDESDVFVTNNNGNMARILAGRRRYFGHKPTIR 240
KETLAS EL PFSSFS+RMAALDFIVCDESDVF TNNNGNMA+ILAGRRRYFGHKPTIR
Sbjct: 392 KETLASMRELAPFSSFSSRMAALDFIVCDESDVFSTNNNGNMAKILAGRRRYFGHKPTIR 451
Query: 241 PNAKKLYKLFVDRNNMTWEEFASKVRTNQIGFMGEPNEVKPGRGEFHENPAACICEDSEA 300
PNAKKLYKLF+ R+N TWEEFAS+VRT+QIGFMGEPNEVKPGRGEFHENP++CICEDS A
Sbjct: 452 PNAKKLYKLFMSRHNKTWEEFASRVRTHQIGFMGEPNEVKPGRGEFHENPSSCICEDSAA 511
Query: 301 KARE--LLTPQNQTLGNHR--KVDTHGSEAEDHLN----DNDLDWSDMDYIDNGYTLQAK 352
KAR LTPQN+ H+ K + + +E D + ++D D +DMDY+DNG ++ K
Sbjct: 512 KARAGLTLTPQNRLDEGHKDGKENINKNETSDVTDELSIEDDQDLTDMDYVDNGTAVKGK 571
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225428165|ref|XP_002278795.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297744531|emb|CBI37793.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|559921|emb|CAA56570.1| axi 1 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
| >gi|224103067|ref|XP_002312912.1| predicted protein [Populus trichocarpa] gi|222849320|gb|EEE86867.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255586213|ref|XP_002533764.1| conserved hypothetical protein [Ricinus communis] gi|223526321|gb|EEF28623.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449444409|ref|XP_004139967.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224086024|ref|XP_002307782.1| predicted protein [Populus trichocarpa] gi|222857231|gb|EEE94778.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224061893|ref|XP_002300651.1| predicted protein [Populus trichocarpa] gi|222842377|gb|EEE79924.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|357495627|ref|XP_003618102.1| Auxin-independent growth promoter [Medicago truncatula] gi|355519437|gb|AET01061.1| Auxin-independent growth promoter [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 353 | ||||||
| TAIR|locus:2014619 | 572 | AT1G76270 [Arabidopsis thalian | 0.983 | 0.606 | 0.695 | 1.1e-135 | |
| TAIR|locus:2121793 | 551 | RHS17 "root hair specific 17" | 0.861 | 0.551 | 0.756 | 1.5e-131 | |
| TAIR|locus:2130938 | 549 | AT4G16650 [Arabidopsis thalian | 0.940 | 0.604 | 0.581 | 1.6e-104 | |
| TAIR|locus:2049527 | 567 | AT2G01480 [Arabidopsis thalian | 0.847 | 0.527 | 0.397 | 1.6e-56 | |
| TAIR|locus:2009467 | 565 | AT1G22460 [Arabidopsis thalian | 0.824 | 0.515 | 0.440 | 1.1e-55 | |
| TAIR|locus:2143181 | 508 | AT5G15740 [Arabidopsis thalian | 0.798 | 0.555 | 0.422 | 2.9e-55 | |
| TAIR|locus:2056981 | 508 | AT2G03280 [Arabidopsis thalian | 0.801 | 0.557 | 0.442 | 3.7e-55 | |
| TAIR|locus:2029984 | 611 | AT1G29200 [Arabidopsis thalian | 0.611 | 0.353 | 0.393 | 5.4e-55 | |
| TAIR|locus:2174754 | 522 | AT5G64600 [Arabidopsis thalian | 0.818 | 0.553 | 0.418 | 1.3e-54 | |
| TAIR|locus:2065563 | 638 | AT2G37980 [Arabidopsis thalian | 0.813 | 0.449 | 0.405 | 3.4e-54 |
| TAIR|locus:2014619 AT1G76270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 247/355 (69%), Positives = 297/355 (83%)
Query: 1 MRVPRKCSPKFYESHVLPILNKKHAIQLTKFDYRLANKLDTDLQKLRCRVNYHALKFTDP 60
MRVPRKC+ + Y + VLP+L K+HA+QL KFDYRL+NKL DLQKLRCRVNYHALKFTDP
Sbjct: 192 MRVPRKCNERCYINRVLPVLLKRHAVQLNKFDYRLSNKLSDDLQKLRCRVNYHALKFTDP 251
Query: 61 IRHIGKMLVERMRLKTKHFIALHLRFEPDMLAFSGCYYGGGDEERTVLGALRKRWKSLHA 120
I +G LV RMRL++KHFIALHLR+EPDMLAFSGCYYGGGD+ER L A+R+RWK+LH
Sbjct: 252 ILTMGNELVRRMRLRSKHFIALHLRYEPDMLAFSGCYYGGGDKERRELAAIRRRWKTLHI 311
Query: 121 SNPDKVRRHGRCPLTPEEVGLMLRALGFGSDVHLYIASGEVYGGRETLAPLKALFPNLHS 180
+NP+K RR GRCPLTPEEVGLMLRALG+GSDVH+Y+ASGEVYGG E+LAPLKALFP+ +S
Sbjct: 312 NNPEKQRRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYGGEESLAPLKALFPHFYS 371
Query: 181 KETLASKYELEPFSSFSARMAALDFIVCDESDVFVTNNNGNMARILAGRRRYFGHKPTIR 240
K+T+A+K ELEPFSS+S+RMAALDF+VCDESDVFVTNNNGNMA+ILAGRRRY GHKPT+R
Sbjct: 372 KDTIATKEELEPFSSYSSRMAALDFLVCDESDVFVTNNNGNMAKILAGRRRYLGHKPTVR 431
Query: 241 PNAKKLYKLFVDRNNMTWEEFASKVRTNQIGFMGEPNEVKPGRGEFHENPAACICEDSEA 300
PNAKKLY+LF+++ N TWEEF+SKVR+ Q GFMGEP EV+ GRGEFHENP+ CICED+EA
Sbjct: 432 PNAKKLYRLFMNKENTTWEEFSSKVRSFQRGFMGEPKEVRAGRGEFHENPSTCICEDTEA 491
Query: 301 KARELLTPQNQTLGNHRKVDTHGSEA-----EDHLNDNDLDWSDMDYIDNGYTLQ 350
KA+ L +++ LG K T+ A +D ++D DWS+ DY + LQ
Sbjct: 492 KAKAQL--ESRKLGKKNK-STNKDAAVTVTNDDQTEEDDPDWSEPDYEEEQSDLQ 543
|
|
| TAIR|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2056981 AT2G03280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pg.C_LG_IV001554 | hypothetical protein (585 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 353 | |||
| cd11299 | 290 | cd11299, O-FucT_plant, GDP-fucose protein O-fucosy | 1e-106 | |
| pfam10250 | 315 | pfam10250, O-FucT, GDP-fucose protein O-fucosyltra | 2e-80 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 3e-11 |
| >gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily | Back alignment and domain information |
|---|
Score = 313 bits (804), Expect = e-106
Identities = 120/239 (50%), Positives = 151/239 (63%), Gaps = 34/239 (14%)
Query: 1 MRVPRKCSPKFYESHVLPILNKKHAIQLTKFDYRLANK-LDTDLQKLRCRVNYHALKFTD 59
RVP + SP +Y VLP+L K I+L FD RLAN L ++Q+LRCRVN+HAL+F
Sbjct: 85 KRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLRCRVNFHALRFVP 144
Query: 60 PIRHIGKMLVERMRLKTKHFIALHLRFEPDMLAFSGCYYGGGDEERTVLGALRKRWKSLH 119
I +G LV+R+R F+ALHLRFE DMLAFSGC
Sbjct: 145 EIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFSGC----------------------- 181
Query: 120 ASNPDKVRRHGRCPLTPEEVGLMLRALGFGSDVHLYIASGEVYGGRETLAPLKALFPNLH 179
G+CPLTPEEVGL+LRALGF +Y+A+GE+YGG L PL+++FPNL+
Sbjct: 182 ----------GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLY 231
Query: 180 SKETLASKYELEPFSSFSARMAALDFIVCDESDVFVTNNNGNMARILAGRRRYFGHKPT 238
+KETLA+ EL PFS S+R+AALD+IVC ESDVFV GN A+ +AG RRY GH+ T
Sbjct: 232 TKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGHRRYLGHRKT 290
|
Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290 |
| >gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 353 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 100.0 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 94.25 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 92.61 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=314.10 Aligned_cols=214 Identities=39% Similarity=0.678 Sum_probs=150.4
Q ss_pred CCChHHHHHhhhhhhhhc------ceEEEccccccccCC-CChHHHHhhhhhcccccccchhHHHHHHHHHHHHHhccCC
Q 018623 6 KCSPKFYESHVLPILNKK------HAIQLTKFDYRLANK-LDTDLQKLRCRVNYHALKFTDPIRHIGKMLVERMRLKTKH 78 (353)
Q Consensus 6 ~~s~~~Y~~~ilP~l~k~------~VI~l~~~~~rLa~~-lp~eiQrLRCrvnf~ALrF~p~I~~lg~~LV~Rlr~~~~p 78 (353)
+..+.+|+++++|++.++ +||.|.++..++.+. .+.++|| +|+|+++|+++|+++|++++..+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~~~~ 196 (351)
T PF10250_consen 125 WSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYLDRDLQR--------YLRFSPEIRELADKFIKRLLAGGGP 196 (351)
T ss_dssp E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GGGGGGGG--------G--B-HHHHHHHHHHHHHH----SS
T ss_pred cCCchhhHHHhhhHHhhhccccccccceeccccccchhcccCccceE--------EEecCHHHHHHHHHHHHHhhcccCc
Confidence 577888999999999987 999999999999975 7889988 9999999999999999999955689
Q ss_pred eEEEEeecchhhhhhhccCCCCChhHHHHHHHHHHHhhhhcCCCchhhhccCCCCCCHHHHHHHHHHhCCCCcceEEEEe
Q 018623 79 FIALHLRFEPDMLAFSGCYYGGGDEERTVLGALRKRWKSLHASNPDKVRRHGRCPLTPEEVGLMLRALGFGSDVHLYIAS 158 (353)
Q Consensus 79 fiALHLR~E~DMlAfsgC~~g~~~~E~~eL~~~R~~wk~~~~~~~~~~R~~G~CPLtPeEvgl~LrAlGf~~~T~IYlA~ 158 (353)
|||+|||+|+|| +++|.+++ ++..|..+|.. ..+.+++...+..|.||++|++++.+++++|+.+.|.||||+
T Consensus 197 yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAt 269 (351)
T PF10250_consen 197 YIAVHLRRGKDW--FSACEFKG---ERHLLASPRCW--GKKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIAT 269 (351)
T ss_dssp EEEEEE--SHHH--HHHHCT-T-------TTTHHHH---GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEE
T ss_pred eEEEeecccCch--HhhcccCC---chHHHHHhHhh--ccccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEec
Confidence 999999999999 99999955 77778777765 223456778899999999999999999999999999999999
Q ss_pred ceeccccccccchHhhCCCcccccccCCccccCcCCCchhhhhhhhhhhhcCCceeeeCCCCchHHHHhhhhhccCCC
Q 018623 159 GEVYGGRETLAPLKALFPNLHSKETLASKYELEPFSSFSARMAALDFIVCDESDVFVTNNNGNMARILAGRRRYFGHK 236 (353)
Q Consensus 159 geiyGg~~~l~pL~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDYiVcl~SDvFV~t~~GNma~~v~GhR~y~G~~ 236 (353)
+++|||.+.|.+|+++||++++|+++.+.+|+++|.+ .++|+||++||++||+||+|..++|+.+|+++|.|.|+.
T Consensus 270 d~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~ 345 (351)
T PF10250_consen 270 DEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND--DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKP 345 (351)
T ss_dssp SS-----------HHHHHHHHGGGT--EE--S-------S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS
T ss_pred CcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc--cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCC
Confidence 9999999999999999999999999999999999966 899999999999999999999999999999999999964
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 353 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 2e-04
Identities = 59/385 (15%), Positives = 100/385 (25%), Gaps = 110/385 (28%)
Query: 19 ILNKKHAIQLTKF-------DYR-LANKLDT-DLQKLRCRVNY---HALKFTDPIRHIGK 66
L K + KF +Y+ L + + T Q Y + D + K
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN-QVFAK 128
Query: 67 MLVERMRLKTKHFIAL-HLRFEPD-----MLAFSGCYYGGGDEERTVLGALRKRWKSLHA 120
V R++ K AL LR + +L G G +T + +
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDGVL---GS----G---KTWVALDVCLSYKVQC 178
Query: 121 SNPDKVRRH----GRCPLTPEEVGLMLRALGFGSDVHLYIASGEVYGGRETLAPLKALFP 176
K+ C +PE V ML+ L LY + + +K
Sbjct: 179 KMDFKI--FWLNLKNC-NSPETVLEMLQKL-------LYQIDPNWTSRSDHSSNIKL--- 225
Query: 177 NLHS-KETLASKYELEPFSSFSARMAALDFI--VCDES--DVF-------VTNNNGNMAR 224
+HS + L + +P+ + L + V + + F +T +
Sbjct: 226 RIHSIQAELRRLLKSKPYEN------CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 225 ILAGRRRYFGHKPTIRPNAKKLYKLFVDRNNMTWEEFASKVRTNQIGFMGEPNEVKPGRG 284
L+ + + P EV
Sbjct: 280 FLSAATTT-------HISLDHHSMTLTPDEVK--SLLLKYLD---CRPQDLPREVLTT-- 325
Query: 285 EFHENPAAC--ICEDSEAKARELLTPQNQTLGNHRKVDTHGSEAEDHLNDNDL------- 335
NP I +E+ L T N N K+ T + + L +
Sbjct: 326 ----NPRRLSII---AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
Query: 336 -----D-----------WSDMDYID 344
W D+ D
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSD 403
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 353 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 98.77 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 98.6 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 96.74 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 94.34 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.1e-08 Score=100.18 Aligned_cols=166 Identities=18% Similarity=0.249 Sum_probs=98.4
Q ss_pred cccccchhHHHHHHHHHHHHHhccCCeEEEEeecchhhhhhhccCCCCChhHHHHHHHHHHHhhhhcCCCchhhhccCCC
Q 018623 53 HALKFTDPIRHIGKMLVERMRLKTKHFIALHLRFEPDMLAFSGCYYGGGDEERTVLGALRKRWKSLHASNPDKVRRHGRC 132 (353)
Q Consensus 53 ~ALrF~p~I~~lg~~LV~Rlr~~~~pfiALHLR~E~DMlAfsgC~~g~~~~E~~eL~~~R~~wk~~~~~~~~~~R~~G~C 132 (353)
..|+|++.|.++|++.++..-. ++|+++|+|...|+... |.......-. .+...+.-..+-......|
T Consensus 217 r~l~~s~~l~~~a~~fi~~~L~--~~~~~~h~r~~~dw~~~--~~~~~~~~~~--------~y~~~H~Rr~d~~~~~~~~ 284 (408)
T 4ap5_A 217 RSMVFARHLREVGDEFRSRHLN--STDDADRIPFQEDWMKM--KVKLGSALGG--------PYLGVHLRRKDFIWGHRQD 284 (408)
T ss_dssp HTCCBCHHHHHHHHHHHHHHHC--CCTTTTTCCCCSSGGGC--CCCTTCBCCE--------EEEEEEECCTTTTTTTCSS
T ss_pred HHhhhhHHHHHHHHHHHHHHhC--cccceeecccchhHhhh--hcccccccCC--------Cccccccccccchhhhhcc
Confidence 4799999999999998887643 36666666666665542 3221100000 0000000000000111122
Q ss_pred -CCCHHHHHHHHHHhCCCCcceEEEEeceeccccccccchHhhCCCcccccccCCccccCcCCCchhhhhhhhhhhhcCC
Q 018623 133 -PLTPEEVGLMLRALGFGSDVHLYIASGEVYGGRETLAPLKALFPNLHSKETLASKYELEPFSSFSARMAALDFIVCDES 211 (353)
Q Consensus 133 -PLtPeEvgl~LrAlGf~~~T~IYlA~geiyGg~~~l~pL~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDYiVcl~S 211 (353)
|-.+.-+..+.+.+-=-+-+.||||+-+ ....+.-|++.+|.++.-.. ..+++..+ .....|.||-.||.+|
T Consensus 285 ~ps~~~~~~~i~~~~~~~~~~~VyiATD~---~~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~a 357 (408)
T 4ap5_A 285 VPSLEGAVRKIRSLMKTHRLDKVFVATDA---VRKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAHA 357 (408)
T ss_dssp SCCHHHHHHHHHHHHHHHTCSCEEEEECC---CHHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHTE
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCC---chhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHhC
Confidence 3222222222222222234579999875 34456789999998754322 22334444 2346799999999999
Q ss_pred ceeeeCCCCchHHHHhhhhhccCCCC
Q 018623 212 DVFVTNNNGNMARILAGRRRYFGHKP 237 (353)
Q Consensus 212 DvFV~t~~GNma~~v~GhR~y~G~~k 237 (353)
|+||+|..++|+..|.=.|-+.|+..
T Consensus 358 ~~FiGt~~StfS~~I~~eR~~~G~~~ 383 (408)
T 4ap5_A 358 RFFIGTSVSTFSFRIHEEREILGLDP 383 (408)
T ss_dssp EEEEBCTTCHHHHHHHHHHHHHTBCG
T ss_pred CeeEeCCcCchhHHHHHHHHhcCCCC
Confidence 99999999999999999999999764
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00