Citrus Sinensis ID: 018889

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHccccccccccccHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccEEEEEHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MPVNVAMTFLIGGILGWIVVKLlrpkphleglVIATCASGNLGNLLLIIVPAicheqgspfgnrdvcssVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAqaaepeevpkevnkdFDANAQTQllrgttddqeDVSVLVAStksssdpecqiivpqashlqtrKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRnliigdsaplrVIQDSIEilgdgtipcITLILggnliqglrsstlkplIIIAVVCVRYIALPFIGVWVVKAAAalgflpsdplyHYVLMVQftlppamnigtMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Flexible Loop (DISEMBL)
MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAaepeevpkevnKDFDANAQTQllrgttddqedVSVLVAstksssdpecQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Low Complexity Region (SEG)
MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSleflhqlleellapptlaaIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Disordered region (IsUnstruct)
***NVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSV*************FFIWSYSYQLIKQSSVRYKA****************************************************QIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL*
Disordered Region (DISOPRED)
MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQS*********************************RGTTD********************QIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Disordered Region (DISEMBL)
MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRY**************EVNKDFDANAQTQLLRGTTDDQEDVSVLVA********ECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Disordered Region (DISPRO)
MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSS********************************************************************TRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	349	2.2.26 [Sep-21-2011]
P38355	427	Uncharacterized transport	yes	no	0.908	0.742	0.222	9e-05

>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1

 Score = 48.1 bits (113), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 140/355 (39%), Gaps = 38/355 (10%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNL-------LLIIVPAI 53
           +P+   +T  I  I G I+ ++L         V+A    GN  +L       L   +P +
Sbjct: 77  IPIFFGLTTGISFISGKIMSRILDLDKDETNFVVANSVFGNSNSLPVSLTLSLAYTLPNL 136

Query: 54  CHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSY-QLIKQSSVRYKALAQAAEPEE 112
             +Q  P  NRD  +S G+ Y      +G    WS+ Y +L+K S        Q   P +
Sbjct: 137 TWDQ-IPNDNRDNVASRGILYLLIFQQIGQMLRWSWGYNKLMKWSGEN----TQHMPPSQ 191

Query: 113 VPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESF 172
           V            Q+ L R    D E++       +   + E   +        +  +  
Sbjct: 192 V------------QSLLERTPNIDNEELVNEEQEEQELLEEENNRMNSSFLSSSSIGDKI 239

Query: 173 WKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWL-RNLIIGDSAPLRVIQDSIEILGDG 231
           W++S     ++   L  PP  + I   +  A+  L R L + D        +++  LG  
Sbjct: 240 WQKSCTVFERIRANL-NPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQLGSV 298

Query: 232 TIPCITLILGGNLI---QGLRSSTLKPLIIIAVVCVRYIA-----LPFIGVWVVKAAAAL 283
           +IP I ++LG NL    +    +     ++I  +  R I      LP I + V     ++
Sbjct: 299 SIPLILVVLGSNLYPSAEVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAVKYINVSI 358

Query: 284 GFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 338
                DP++  V  +    PPA+ +  +TQL +  + E + +  W Y V +L ++
Sbjct: 359 L---DDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFWGYAVLSLPVS 410

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
255561457	406	auxin:hydrogen symporter, putative [Rici	0.951	0.817	0.676	1e-134
224081467	397	predicted protein [Populus trichocarpa]	0.925	0.813	0.670	1e-132
359480743	421	PREDICTED: uncharacterized transporter Y	0.988	0.819	0.632	1e-126
147765756	436	hypothetical protein VITISV_012649 [Viti	0.988	0.791	0.632	1e-126
18398448	396	auxin efflux carrier-like protein [Arabi	0.916	0.808	0.595	1e-120
297797791	395	predicted protein [Arabidopsis lyrata su	0.919	0.812	0.618	1e-119
21536598	396	unknown [Arabidopsis thaliana]	0.916	0.808	0.590	1e-119
356538399	419	PREDICTED: uncharacterized transporter Y	0.982	0.818	0.582	1e-119
356496547	419	PREDICTED: uncharacterized transporter Y	0.982	0.818	0.585	1e-119
449456885	420	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.968	0.804	0.621	1e-118

>gi|255561457|ref|XP_002521739.1| auxin:hydrogen symporter, putative [Ricinus communis] gi|223539130|gb|EEF40726.1| auxin:hydrogen symporter, putative [Ricinus communis]

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/349 (67%), Positives = 284/349 (81%), Gaps = 17/349 (4%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVNV +TFLIGGILGW++VK+L+PKP+LEGLVIATC+SGNLGNLLLI+VPAIC+E GSP
Sbjct: 75  MPVNVGLTFLIGGILGWVLVKVLKPKPYLEGLVIATCSSGNLGNLLLIVVPAICNENGSP 134

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
           FG+R+ C S+GLSYASFSMA+GGF+IW+Y+Y LI+ S+ + +A+    E  + P   NKD
Sbjct: 135 FGDRETCKSIGLSYASFSMAIGGFYIWTYTYHLIRTSATKLRAIQAEEEASKAP---NKD 191

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFL 180
            +A  +T LL+G  +DQE V + V S KS  D E Q   P +S         W + +  L
Sbjct: 192 LEATPETHLLKG--EDQEHVVISVPSIKSVDDQESQ---PASS---------WSKWIGIL 237

Query: 181 HQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLIL 240
            Q++EELLAPPT+AAI GF+FGA  +LRNLIIG SAPLRVIQDSI++LGDGTIPCITLIL
Sbjct: 238 RQIMEELLAPPTIAAIFGFLFGATTFLRNLIIGSSAPLRVIQDSIKLLGDGTIPCITLIL 297

Query: 241 GGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 300
           GGNLIQGLRSS +KP II+ V+ VR++ LP IG+W+VKAA +LGFLPSDPLYH+VLMVQ+
Sbjct: 298 GGNLIQGLRSSRIKPWIIVGVLFVRFMMLPAIGIWLVKAAGSLGFLPSDPLYHFVLMVQY 357

Query: 301 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
           TLPPAMNIGTMTQLFDV QEECSVLFLWTYLVAALALT WS +YMWILS
Sbjct: 358 TLPPAMNIGTMTQLFDVGQEECSVLFLWTYLVAALALTFWSTIYMWILS 406

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081467|ref|XP_002306421.1| predicted protein [Populus trichocarpa] gi|222855870|gb|EEE93417.1| predicted protein [Populus trichocarpa]

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/349 (67%), Positives = 274/349 (78%), Gaps = 26/349 (7%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVN+  TFLIGGILGWI+VK+LRPKP+LEGLVIATC+SGNLGNLLLIIVPAIC E GSP
Sbjct: 75  MPVNIGFTFLIGGILGWILVKILRPKPYLEGLVIATCSSGNLGNLLLIIVPAICTEDGSP 134

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
           FG+  +C+SVGLSYASFSMALGGFFIW+Y++ LI+ S+ + KAL    E  + P   N D
Sbjct: 135 FGDSSICTSVGLSYASFSMALGGFFIWTYTFHLIRTSAAKLKALQAVVEASKAP---NND 191

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFL 180
           FDA+ +T LL G   DQE+V++       SS                     W + + FL
Sbjct: 192 FDASQETHLLIG--QDQENVAIEHGKGNVSS---------------------WTKLIGFL 228

Query: 181 HQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLIL 240
           HQ+LEELL PPT+AAI+GFIFGA  +LRNLIIG  APLRVIQDSI++LGDGTIPCITLIL
Sbjct: 229 HQILEELLEPPTIAAILGFIFGATTFLRNLIIGSEAPLRVIQDSIKLLGDGTIPCITLIL 288

Query: 241 GGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 300
           GGNL +GLR+S +K  I++ V+CVRYI LP IG+WVVKAA  LGFLPSDPL+HYVLM+Q+
Sbjct: 289 GGNLTEGLRASKIKSWIVVGVICVRYIILPAIGMWVVKAAGHLGFLPSDPLFHYVLMIQY 348

Query: 301 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
           TLPPAMNIGTMTQLFDV QEECSVLFLWTYLVAALALT WS ++MWILS
Sbjct: 349 TLPPAMNIGTMTQLFDVGQEECSVLFLWTYLVAALALTAWSTIFMWILS 397

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480743|ref|XP_002276744.2| PREDICTED: uncharacterized transporter YBR287W-like [Vitis vinifera] gi|296082565|emb|CBI21570.3| unnamed protein product [Vitis vinifera]

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/351 (63%), Positives = 272/351 (77%), Gaps = 6/351 (1%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVN+ +TFL GGILGW+VVK+L+PK HLEGL++ATC+SGNLGNLLLI++PAIC E GSP
Sbjct: 75  MPVNIGLTFLFGGILGWLVVKILKPKQHLEGLIMATCSSGNLGNLLLIVIPAICEEDGSP 134

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
           FG+   C + GLSYAS S ALGG FIW+Y+YQLI+ S  +Y A+    +  +VP   NK+
Sbjct: 135 FGDHASCGASGLSYASLSTALGGIFIWTYTYQLIRSSVTKYYAIQDVKDVIKVP---NKE 191

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQ--ASHLQTRKESFWKRSLE 178
            DAN +T LL+G  D +   S    S  +  D E Q+IV Q  A  L+  KESFW R   
Sbjct: 192 LDANKETHLLKGE-DQEHGTSSFPPSNSTGEDVEKQVIVSQESAGSLEDGKESFWARVAG 250

Query: 179 FLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITL 238
              Q+++ELL+PPTL AI+GF+FGAV WL+N + GD APLRV+QDS+++L +GTIPCITL
Sbjct: 251 IASQMMKELLSPPTLGAILGFVFGAVPWLKNFLTGDEAPLRVVQDSVKLLANGTIPCITL 310

Query: 239 ILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMV 298
           ILGGNL +GLRSS +KP IIIAV+CVRY  LP IG+ VVKAA+ LGF+ SDPLY YVLM+
Sbjct: 311 ILGGNLTRGLRSSGIKPSIIIAVICVRYFILPLIGIAVVKAASNLGFVLSDPLYLYVLMI 370

Query: 299 QFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
           QFTLPPAMNIGTMT+LF+V QEECSVLFLWTYL AALALT WS +YMW+LS
Sbjct: 371 QFTLPPAMNIGTMTELFNVGQEECSVLFLWTYLFAALALTVWSTIYMWLLS 421

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147765756|emb|CAN62432.1| hypothetical protein VITISV_012649 [Vitis vinifera]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/351 (63%), Positives = 272/351 (77%), Gaps = 6/351 (1%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVN+ +TFL GGILGW+VVK+L+PK HLEGL++ATC+SGNLGNLLLI++PAIC E GSP
Sbjct: 90  MPVNIGLTFLFGGILGWLVVKILKPKQHLEGLIMATCSSGNLGNLLLIVIPAICEEDGSP 149

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
           FG+   C + GLSYAS S ALGG FIW+Y+YQLI+ S  +Y A+    +  +VP   NK+
Sbjct: 150 FGDHASCGASGLSYASLSTALGGIFIWTYTYQLIRSSVTKYYAIQDVKDVIKVP---NKE 206

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQ--ASHLQTRKESFWKRSLE 178
            DAN +T LL+G  D +   S    S  +  D E Q+IV Q  A  L+  KESFW R   
Sbjct: 207 LDANKETHLLKGE-DQEHGTSSFPPSNSTGEDVEKQVIVSQESAGSLEDGKESFWARVAG 265

Query: 179 FLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITL 238
              Q+++ELL+PPTL AI+GF+FGAV WL+N + GD APLRV+QDS+++L +GTIPCITL
Sbjct: 266 IASQMMKELLSPPTLGAILGFVFGAVPWLKNFLTGDEAPLRVVQDSVKLLANGTIPCITL 325

Query: 239 ILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMV 298
           ILGGNL +GLRSS +KP IIIAV+CVRY  LP IG+ VVKAA+ LGF+ SDPLY YVLM+
Sbjct: 326 ILGGNLTRGLRSSGIKPSIIIAVICVRYFILPLIGIAVVKAASNLGFVLSDPLYLYVLMI 385

Query: 299 QFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
           QFTLPPAMNIGTMT+LF+V QEECSVLFLWTYL AALALT WS +YMW+LS
Sbjct: 386 QFTLPPAMNIGTMTELFNVGQEECSVLFLWTYLFAALALTVWSTIYMWLLS 436

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18398448|ref|NP_565417.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|30680004|ref|NP_849964.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|42570811|ref|NP_973479.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|79322403|ref|NP_001031363.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|4914371|gb|AAD32907.1| expressed protein [Arabidopsis thaliana] gi|110740748|dbj|BAE98473.1| hypothetical protein [Arabidopsis thaliana] gi|330251540|gb|AEC06634.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|330251541|gb|AEC06635.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|330251542|gb|AEC06636.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|330251543|gb|AEC06637.1| auxin efflux carrier-like protein [Arabidopsis thaliana]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/349 (59%), Positives = 274/349 (78%), Gaps = 29/349 (8%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVN+ +TFLIGG+LGW+VVK+L+P P+LEGL++ATC++GN+GNL +I+VPAIC E  SP
Sbjct: 75  MPVNMGLTFLIGGLLGWLVVKILKPPPYLEGLIVATCSAGNMGNLPIILVPAICDEDKSP 134

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVP-KEVNK 119
           FGNR VC +VGLSYASFSMALGGF+IW+Y+++LIK S+++ +A+    E E++  K  N 
Sbjct: 135 FGNRSVCRTVGLSYASFSMALGGFYIWTYTFRLIKGSAMKVQAIE---ESEKIAIKSSNS 191

Query: 120 DFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEF 179
           D +A+ +T LL G  +D+E+  V                          K  FW++ ++F
Sbjct: 192 DLEADHKTHLL-GAPEDKENKVV------------------------KEKTGFWRKGVDF 226

Query: 180 LHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLI 239
           LH++LEELLAPPTL AI+GFIFGAV WLRNLIIGD APLR++Q + ++LGDGTIPC+T+I
Sbjct: 227 LHEILEELLAPPTLGAIIGFIFGAVRWLRNLIIGDDAPLRIVQSTAKLLGDGTIPCMTII 286

Query: 240 LGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQ 299
           LGGNLIQGLRSS +KP++++ +VCVRYIA+P IG+ +V  AA LGFLP+DPL+ YVLM+Q
Sbjct: 287 LGGNLIQGLRSSAVKPMVVLGIVCVRYIAMPIIGIGIVLTAANLGFLPADPLFQYVLMLQ 346

Query: 300 FTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL 348
           FTLPPAMNIGTMTQL++VAQ+ECSVL LWTYLVA LALT WS +++ +L
Sbjct: 347 FTLPPAMNIGTMTQLYNVAQDECSVLMLWTYLVAILALTVWSTIFLHLL 395

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797791|ref|XP_002866780.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297312615|gb|EFH43039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/349 (61%), Positives = 265/349 (75%), Gaps = 28/349 (8%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MP+NV +TFL+GGILGW+VVKLL PKP L GL+IATCASGN+GNL+LI+VPAIC E+GSP
Sbjct: 75  MPINVGITFLVGGILGWLVVKLLNPKPQLHGLIIATCASGNMGNLMLILVPAICDEEGSP 134

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
           FGNR VC S+GLSYASFSMALGGF+IW+YSYQL++ S+ +++AL  A     + K  NKD
Sbjct: 135 FGNRSVCRSIGLSYASFSMALGGFYIWTYSYQLVRSSATQFRALEAAG----LVKSPNKD 190

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFL 180
            D++  T LL+                  + D E Q           +K S      + L
Sbjct: 191 IDSDPHTLLLK---------------PHQNQDLEIQ---------GKQKVSTGTYIKDLL 226

Query: 181 HQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLIL 240
           HQ+LEEL APPT+ AI+GF+FGA  WLRNLIIG++APLRVIQDS+++LGDGTIPCITLIL
Sbjct: 227 HQILEELFAPPTIGAILGFVFGATNWLRNLIIGENAPLRVIQDSVKLLGDGTIPCITLIL 286

Query: 241 GGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 300
           GGNLIQGLRSS +K  +I+ V+CVRYI LP +GV VV+ A  LG+LP DPL+ YVLM+QF
Sbjct: 287 GGNLIQGLRSSAVKTSVIMGVICVRYIILPVVGVGVVQLAGNLGYLPPDPLFRYVLMLQF 346

Query: 301 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
           TLPPAMNI TM QLFDVAQ+ECSV+FLWTYLVA+LALT WS +++ ILS
Sbjct: 347 TLPPAMNISTMAQLFDVAQDECSVIFLWTYLVASLALTIWSTIFLSILS 395

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21536598|gb|AAM60930.1| unknown [Arabidopsis thaliana]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/349 (59%), Positives = 273/349 (78%), Gaps = 29/349 (8%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVN+ +TFLIGG+LGW+VVK+L+P P+LEGL++ATC++GN+GNL +I+VPAIC E  SP
Sbjct: 75  MPVNMGLTFLIGGLLGWLVVKILKPPPYLEGLIVATCSAGNMGNLPIILVPAICDEDKSP 134

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVP-KEVNK 119
           FGNR VC +VGLSYASFSMALGGF+IW+Y+++LIK S+++ +A+    E E++  K  N 
Sbjct: 135 FGNRSVCRTVGLSYASFSMALGGFYIWTYTFRLIKGSAMKVQAIE---ESEKIAIKSSNS 191

Query: 120 DFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEF 179
           D +A+ +T LL G  +D+E+  V                          +  FW++ ++F
Sbjct: 192 DLEADHKTHLL-GAPEDKENKVV------------------------KEETGFWRKGVDF 226

Query: 180 LHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLI 239
           LH++LEELLAPPTL AI+GFIFGAV WLRNLIIGD APLR++Q + ++LGDGTIPC+T+I
Sbjct: 227 LHEILEELLAPPTLGAIIGFIFGAVRWLRNLIIGDDAPLRIVQSTAKLLGDGTIPCMTII 286

Query: 240 LGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQ 299
           LGGNLIQGLRSS +KP++++ +VC RYIA+P IG+ +V  AA LGFLP+DPL+ YVLM+Q
Sbjct: 287 LGGNLIQGLRSSAVKPMVVLGIVCARYIAMPIIGIGIVLTAANLGFLPADPLFQYVLMLQ 346

Query: 300 FTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL 348
           FTLPPAMNIGTMTQL++VAQ+ECSVL LWTYLVA LALT WS +++ +L
Sbjct: 347 FTLPPAMNIGTMTQLYNVAQDECSVLMLWTYLVAILALTVWSTIFLHLL 395

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538399|ref|XP_003537691.1| PREDICTED: uncharacterized transporter YBR287W-like [Glycine max]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/350 (58%), Positives = 271/350 (77%), Gaps = 7/350 (2%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVNV +TFLIGGI+GWI+VKLL+P   +EGL+IA C+SGN+GNL ++I+PAIC E+G P
Sbjct: 76  MPVNVGLTFLIGGIIGWILVKLLKPNLKVEGLIIAACSSGNMGNLPIVIIPAICDEKGGP 135

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
           FG RD+C +  LSYASFSMALGG FIW+Y+YQ +K  S+++KAL +AAE  +VP   NKD
Sbjct: 136 FGARDICRNNALSYASFSMALGGIFIWTYTYQTVKSRSLKFKAL-EAAEIVKVP---NKD 191

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQ-ASHLQTRKESFWKRSLEF 179
           FDANA+T LL+   +D ED ++ V ++    D E QIIV Q  S++  ++ES W R +E 
Sbjct: 192 FDANAETHLLKD--NDSEDTTIQVPTSTYIGDTENQIIVDQDQSNVSKKRESSWHRMVEV 249

Query: 180 LHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLI 239
           +  LL EL++PP +A   GF+FGAV WLRN+IIGD APLRVIQDS+++LG+GTIPCITL+
Sbjct: 250 MSHLLAELMSPPAIATFFGFLFGAVAWLRNIIIGDDAPLRVIQDSLQLLGNGTIPCITLL 309

Query: 240 LGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQ 299
           LGGNL QGL+SS++KPL +I+++  R + LP IG+++V+AAA    LP DPL+ YVL++Q
Sbjct: 310 LGGNLAQGLKSSSVKPLTLISIIIARLLLLPIIGLFIVRAAANFDLLPVDPLFQYVLVMQ 369

Query: 300 FTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
           + +PPAMNI TM QLF+V  EECSV+ LWTY  AA+ALT WS   +W+LS
Sbjct: 370 YAMPPAMNISTMAQLFEVGNEECSVILLWTYSAAAIALTAWSTFLLWLLS 419

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496547|ref|XP_003517128.1| PREDICTED: uncharacterized transporter YBR287W-like isoform 2 [Glycine max]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/350 (58%), Positives = 271/350 (77%), Gaps = 7/350 (2%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVNV +TFLIGGI+GWI+VKLL+P   +EGL+IA C+SGN+GNL ++I+PAIC E+G P
Sbjct: 76  MPVNVGLTFLIGGIIGWILVKLLKPNLKVEGLIIAACSSGNMGNLPIVIIPAICDEKGGP 135

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
           FG RD+C +  LSYASFSMALGG FIW+Y+YQ +K  S+++KAL +AAE  +VP   NKD
Sbjct: 136 FGARDICRNNALSYASFSMALGGIFIWTYTYQTVKSRSLKFKAL-EAAEIVKVP---NKD 191

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQ-ASHLQTRKESFWKRSLEF 179
           FDANA+T LL+   +D ED ++ V ++    D E QIIV Q  S++  + ES W R +E 
Sbjct: 192 FDANAETHLLKD--NDSEDTTIEVPTSTYIGDTENQIIVDQDQSNVSKKTESSWHRMVEV 249

Query: 180 LHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLI 239
           +  LL EL++PP +A   GF+FGAV WLRNLIIGD+APLRVIQDS+++LG+GTIPCITL+
Sbjct: 250 MSHLLAELVSPPAIATFFGFLFGAVAWLRNLIIGDNAPLRVIQDSLQLLGNGTIPCITLL 309

Query: 240 LGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQ 299
           LGGNL QGL+SS++KPL + +++  R   LP IG+++V+AAA LG LP DPL+ YVL++Q
Sbjct: 310 LGGNLTQGLKSSSVKPLTLTSIIIARLFLLPVIGLFIVRAAANLGLLPVDPLFQYVLVMQ 369

Query: 300 FTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
           + +PPAMNI T+ QLF+V  EECSV+ LWTY  AA+ALT WS   +W+LS
Sbjct: 370 YAMPPAMNISTVAQLFEVGNEECSVILLWTYTAAAIALTAWSTFLLWLLS 419

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456885|ref|XP_004146179.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized transporter YBR287W-like [Cucumis sativus]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/349 (62%), Positives = 267/349 (76%), Gaps = 11/349 (3%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           MPVN+ +TFL GGILGWIVVK+L+PKP+LEGLVIA  +SGNLGNLLLIIVPAIC E GSP
Sbjct: 83  MPVNIGLTFLFGGILGWIVVKILKPKPYLEGLVIAASSSGNLGNLLLIIVPAICDEDGSP 142

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
           FG+RD C+S+GLSYASFSMALGGF++W+Y+YQL+K SS+R KAL +  E EE  K  N  
Sbjct: 143 FGDRDTCTSLGLSYASFSMALGGFYLWTYTYQLVKTSSMRLKAL-EVEEAEEQLKAPNHA 201

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFL 180
            + + Q  LL     +Q  +  +   ++ S D          S  +    S W ++LEF+
Sbjct: 202 SNGDLQAHLLNKQNGEQAHLLPVSVESQHSVD----------SLEKGESPSIWAKTLEFM 251

Query: 181 HQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLIL 240
           H ++EEL+APP+L AIVGFIFGAV WLRNL++GD+AP +VIQDS+++LG+GTIPC TLIL
Sbjct: 252 HSIIEELMAPPSLGAIVGFIFGAVAWLRNLVVGDNAPFKVIQDSVQLLGEGTIPCTTLIL 311

Query: 241 GGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 300
           GGNL+QGLRSS +K   II V+ VRY+ LP IG+ VVKAA ALGFL  DPLYH++LMVQ+
Sbjct: 312 GGNLVQGLRSSKVKASTIIGVIGVRYVVLPLIGISVVKAANALGFLAPDPLYHFLLMVQY 371

Query: 301 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
           T PPAM IGTMTQLF V QEECSV+ LWTYL AAL+L  WS V+MWILS
Sbjct: 372 TTPPAMAIGTMTQLFGVGQEECSVIMLWTYLAAALSLALWSAVFMWILS 420

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
TAIR|locus:2053908	396	AT2G17500 [Arabidopsis thalian	0.613	0.540	0.534	2.2e-105
TAIR|locus:2156847	395	AT5G65980 "AT5G65980" [Arabido	0.441	0.389	0.714	1.5e-104
TAIR|locus:2011731	390	AT1G76520 "AT1G76520" [Arabido	0.441	0.394	0.493	2.9e-72
TAIR|locus:2011746	415	AT1G76530 "AT1G76530" [Arabido	0.441	0.371	0.515	6.1e-66
TAIR|locus:2185123	431	AT5G01990 "AT5G01990" [Arabido	0.435	0.352	0.389	2.2e-42
TAIR|locus:2026366	457	AT1G71090 "AT1G71090" [Arabido	0.426	0.326	0.34	9.3e-41
CGD|CAL0005962	446	orf19.6117 [Candida albicans (	0.389	0.304	0.284	7.5e-05
UNIPROTKB|Q59RR6	446	ZSP11 "Potential Auxin Efflux	0.389	0.304	0.284	7.5e-05
SGD|S000000491	427	YBR287W "Protein of unknown fu	0.366	0.299	0.258	8.3e-05
CGD|CAL0001802	446	orf19.733 [Candida albicans (t	0.389	0.304	0.284	9.7e-05

TAIR|locus:2053908 AT2G17500 [Arabidopsis thaliana (taxid:3702)]

 Score = 625 (225.1 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
 Identities = 116/217 (53%), Positives = 159/217 (73%)

Query:   135 DDQEDVSVLVASTKSSSDPECQII-VPQASHLQTRKES--FWKRSXXXXXXXXXXXXXXX 191
             ++ E +++  +++   +D +  ++  P+    +  KE   FW++                
Sbjct:   179 EESEKIAIKSSNSDLEADHKTHLLGAPEDKENKVVKEKTGFWRKGVDFLHEILEELLAPP 238

Query:   192 XXXXIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSS 251
                 I+GFIFGAV WLRNLIIGD APLR++Q + ++LGDGTIPC+T+ILGGNLIQGLRSS
Sbjct:   239 TLGAIIGFIFGAVRWLRNLIIGDDAPLRIVQSTAKLLGDGTIPCMTIILGGNLIQGLRSS 298

Query:   252 TLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTM 311
              +KP++++ +VCVRYIA+P IG+ +V  AA LGFLP+DPL+ YVLM+QFTLPPAMNIGTM
Sbjct:   299 AVKPMVVLGIVCVRYIAMPIIGIGIVLTAANLGFLPADPLFQYVLMLQFTLPPAMNIGTM 358

Query:   312 TQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL 348
             TQL++VAQ+ECSVL LWTYLVA LALT WS +++ +L
Sbjct:   359 TQLYNVAQDECSVLMLWTYLVAILALTVWSTIFLHLL 395

GO:0009507 "chloroplast" evidence=ISM

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2156847 AT5G65980 "AT5G65980" [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
 Identities = 110/154 (71%), Positives = 133/154 (86%)

Query:   196 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKP 255
             I+GF+FGA  WLRNLIIG++APLRVIQDS+++LG+GTIPCITLILGGNLIQGLRSS +K 
Sbjct:   242 ILGFVFGATNWLRNLIIGENAPLRVIQDSVKLLGEGTIPCITLILGGNLIQGLRSSAVKK 301

Query:   256 LIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLF 315
              +I+ V+ VRYI LP +GV VV+ A  LG+LP DPL+ YVLM+QF LPPAMNI TM QLF
Sbjct:   302 SVIVGVIIVRYILLPVVGVGVVQLAGNLGYLPPDPLFRYVLMLQFALPPAMNISTMAQLF 361

Query:   316 DVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
             DVAQ+ECSV+FLWTYLVA+LALT WS +++ ILS
Sbjct:   362 DVAQDECSVIFLWTYLVASLALTVWSTIFLSILS 395

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2011731 AT1G76520 "AT1G76520" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
 Identities = 76/154 (49%), Positives = 113/154 (73%)

Query:   196 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKP 255
             ++  + G +  LR LIIG  APLRV+QDS+ ++GDG +P +T+I+GGNL++GLRSS +K 
Sbjct:   237 MIALVIGLITPLRKLIIGTEAPLRVLQDSVTLVGDGAVPAMTMIIGGNLLKGLRSSGMKM 296

Query:   256 LIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLF 315
               II V+  RY+ LP  GV +V+ A  L  + S+PLY +VL++Q+ +PPAMN+GT+TQLF
Sbjct:   297 SSIIGVLVARYVLLPMSGVLIVRGAYKLDLVTSEPLYQFVLLLQYAVPPAMNLGTITQLF 356

Query:   316 DVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
                + ECSV+ LWTY +A++ALT W   +MW+++
Sbjct:   357 GTGESECSVIMLWTYSLASIALTVWPTFFMWLVA 390

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015824 "proline transport" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2011746 AT1G76530 "AT1G76530" [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
 Identities = 82/159 (51%), Positives = 112/159 (70%)

Query:   196 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLR-----S 250
             I+  + G +  LRNLIIG  AP RVIQDS+ +LGDG IP +TLILGGNL++G+R     S
Sbjct:   257 IIALVIGLITPLRNLIIGTVAPFRVIQDSLTLLGDGAIPAMTLILGGNLLKGMRRSEVRS 316

Query:   251 STLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGT 310
             S +K   II V+  RYI LP  GV +V+ A  L  + S+PLY +VL++Q+ +PPAMN+GT
Sbjct:   317 SEMKNSCIIGVLVARYILLPVSGVLLVRGAYKLDLVTSEPLYQFVLLLQYAVPPAMNLGT 376

Query:   311 MTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 349
              TQLF   + ECSV+ LWTY +AA++LT W   +MW+++
Sbjct:   377 KTQLFGAGESECSVIMLWTYSLAAVSLTVWPTFFMWLVT 415

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2185123 AT5G01990 "AT5G01990" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
 Identities = 60/154 (38%), Positives = 91/154 (59%)

Query:   196 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKP 255
             I+  I GA+ + + LI  + APL    DS  ILGD  IPCI L LGGNLI G  SS L  
Sbjct:   278 ILAMILGAIPFTKKLIFTNGAPLFFFTDSCMILGDAMIPCILLALGGNLINGPGSSKLGF 337

Query:   256 LIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDP-LYHYVLMVQFTLPPAMNIGTMTQL 314
                 A++  R + +P +G+ +V  A  LGFLP+D  ++ +VL++Q T+P ++  G +  L
Sbjct:   338 KTTAAIIIGRLVLVPPVGLGIVTVADKLGFLPADDKMFRFVLLLQHTMPTSVLSGAVANL 397

Query:   315 FDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL 348
                 +E  +VLF W ++ A  ++ GW ++Y+ IL
Sbjct:   398 RGCGRESAAVLF-WVHIFAIFSMAGWMVLYINIL 430

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2026366 AT1G71090 "AT1G71090" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 9.3e-41, Sum P(2) = 9.3e-41
 Identities = 51/150 (34%), Positives = 88/150 (58%)

Query:   196 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKP 255
             ++  I G+V  L++++ G  APL  I DS+ I+G   +P + L+LGG L +G   STL  
Sbjct:   295 LLAIIIGSVPQLKSVVFGYDAPLSFITDSLNIMGSAMVPSVMLVLGGMLSEGPNESTLGL 354

Query:   256 LIIIAVVCVRYIALPFIGVWVVKAAAALGFLPS-DPLYHYVLMVQFTLPPAMNIGTMTQL 314
                I +   R + LP +G+ +V +A  LG + S DP++ +VL++Q++ P A+ +G +  L
Sbjct:   355 RTTIGISVARLLVLPLVGIGIVMSADKLGLISSADPMFKFVLLLQYSTPSAILLGAIASL 414

Query:   315 FDVAQEECSVLFLWTYLVAALALTGWSMVY 344
                A  E S L  W ++ A L+LT + +++
Sbjct:   415 RGYAVREASALLFWQHIFALLSLTFYIVIF 444

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

CGD|CAL0005962 orf19.6117 [Candida albicans (taxid:5476)]

 Score = 123 (48.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
 Identities = 45/158 (28%), Positives = 75/158 (47%)

Query:   196 IVGFIFGAVVWLRNLIIGDSAPLRVIQDS----IEILGDGTIPCITLILGGNLIQGLRSS 251
             +V  I  ++ +L+NLI  DS    ++ ++    I  LG  +IP I ++LG NL     S+
Sbjct:   281 LVAIIVASIPYLKNLIF-DSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYP---SN 336

Query:   252 TLKP------LIIIAVVCVRYIA-----LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 300
              + P       I+   +  R I      LP I + V    A++     DP++  V  +  
Sbjct:   337 DIPPPSKHYNRILFGSLLSRMILPSAVLLPIIALCVKYIKASI---LDDPIFLIVAFILT 393

Query:   301 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 338
               PPA+ +  +TQL +V Q+E S +  W Y+V  +  T
Sbjct:   394 VSPPAIQLSQITQLNNVYQKEMSGVLFWGYVVLVVPTT 431

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|Q59RR6 ZSP11 "Potential Auxin Efflux Carrier protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 123 (48.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
 Identities = 45/158 (28%), Positives = 75/158 (47%)

Query:   196 IVGFIFGAVVWLRNLIIGDSAPLRVIQDS----IEILGDGTIPCITLILGGNLIQGLRSS 251
             +V  I  ++ +L+NLI  DS    ++ ++    I  LG  +IP I ++LG NL     S+
Sbjct:   281 LVAIIVASIPYLKNLIF-DSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYP---SN 336

Query:   252 TLKP------LIIIAVVCVRYIA-----LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 300
              + P       I+   +  R I      LP I + V    A++     DP++  V  +  
Sbjct:   337 DIPPPSKHYNRILFGSLLSRMILPSAVLLPIIALCVKYIKASI---LDDPIFLIVAFILT 393

Query:   301 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 338
               PPA+ +  +TQL +V Q+E S +  W Y+V  +  T
Sbjct:   394 VSPPAIQLSQITQLNNVYQKEMSGVLFWGYVVLVVPTT 431

GO:0003674 "molecular_function" evidence=ND

SGD|S000000491 YBR287W "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 93 (37.8 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
 Identities = 36/139 (25%), Positives = 60/139 (43%)

Query:   208 RNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLR--------SSTLKPLIII 259
             R L + D        +++  LG  +IP I ++LG NL             S  L   II 
Sbjct:   275 RELFMEDGFINNTFAEAVTQLGSVSIPLILVVLGSNLYPSAEVFPKTVHHSKLLIGSIIG 334

Query:   260 AVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQ 319
              ++      LP I +  VK    +  L  DP++  V  +    PPA+ +  +TQL +  +
Sbjct:   335 RMILPSCFLLPIIAI-AVKYIN-VSIL-DDPIFLVVGFLLTVSPPAIQLTQITQLNEFFE 391

Query:   320 EECSVLFLWTYLVAALALT 338
              E + +  W Y V +L ++
Sbjct:   392 AEMADILFWGYAVLSLPVS 410

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

CGD|CAL0001802 orf19.733 [Candida albicans (taxid:5476)]

 Score = 122 (48.0 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
 Identities = 45/158 (28%), Positives = 75/158 (47%)

Query:   196 IVGFIFGAVVWLRNLIIGDSAPLRVIQDS----IEILGDGTIPCITLILGGNLIQGLRSS 251
             +V  I  ++ +L+NLI  DS    ++ ++    I  LG  +IP I ++LG NL     S+
Sbjct:   281 LVAIIVASIPYLKNLIF-DSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYL---SN 336

Query:   252 TLKP------LIIIAVVCVRYIA-----LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 300
              + P       I+   +  R I      LP I + V    A++     DP++  V  +  
Sbjct:   337 DIPPPSKHYNRILFGSLLSRMILPSAVLLPIIALCVKYIKASI---LDDPIFLIVAFILT 393

Query:   301 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 338
               PPA+ +  +TQL +V Q+E S +  W Y+V  +  T
Sbjct:   394 VSPPAIQLSQITQLNNVYQKEMSGVLFWGYVVLVVPTT 431

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_V000390 hypothetical protein (397 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	349
pfam03547	321	pfam03547, Mem_trans, Membrane transport protein	2e-48
COG0679	311	COG0679, COG0679, Predicted permeases [General fun	2e-07

>gnl|CDD|217608 pfam03547, Mem_trans, Membrane transport protein

 Score =  165 bits (420), Expect = 2e-48
 Identities = 86/341 (25%), Positives = 128/341 (37%), Gaps = 84/341 (24%)

Query: 1   MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSP 60
           +PV V +   I  I+G++V K+ +      G++I T A  N G L L ++ A+  E    
Sbjct: 65  IPVLVVLIVAISLIIGFLVSKIFKLPLEWRGVLILTSAFPNTGFLGLPLLLALYGE---- 120

Query: 61  FGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKD 120
                     GLSYA  S+ LG   IW+  Y LI+    +     ++             
Sbjct: 121 ---------EGLSYAIISVVLGVIIIWTLGYFLIESRGAKRDKSEESG------------ 159

Query: 121 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFL 180
                                                     S           + +   
Sbjct: 160 --------------------------------------DTSGSMTLLILIVVLLKLI--- 178

Query: 181 HQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLIL 240
                  L PPT A+++G I G V +L  LI         IQDSI ILGD  IP     L
Sbjct: 179 -------LNPPTYASLLGLILGLVGFLLPLIFP-----EFIQDSISILGDAAIPMALFSL 226

Query: 241 GGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 300
           G  L  G   S+L        + +R I +P + + +V        L    L   V +++ 
Sbjct: 227 GLTLALGKLKSSLGAATATIHLILRLILMPLVMLGIVLLLG----LRGLTL--LVAILEA 280

Query: 301 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWS 341
            LPPA+ +G + QL++V +EE S +  WT L+A L L  W 
Sbjct: 281 ALPPAIVLGVIAQLYNVDEEEASTVVFWTTLLALLTLPLWI 321

This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life. Length = 321

>gnl|CDD|223751 COG0679, COG0679, Predicted permeases [General function prediction only]

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 16/159 (10%)

Query: 190 PPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLR 249
           P  +A I+G +   +           +    +  ++++L     P   + LG +L   L+
Sbjct: 169 PLIIALILGLLLNLLGI---------SLPAPLDTAVDLLASAASPLALIALGLSLAF-LK 218

Query: 250 SSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIG 309
               KP II+  + ++ +  P +      A      L    L   VL++   +P A+N  
Sbjct: 219 LKGSKPPIILIALSLKLLLAPLV------ALLVAKLLGLSGLALQVLVLLSAMPTAVNAY 272

Query: 310 TMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL 348
            + + +       +   L + L++ L L    ++ +  L
Sbjct: 273 VLARQYGGDPRLAASTILLSTLLSLLTLPLLILLLLRSL 311

Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
KOG2722	408	consensus Predicted membrane protein [Function unk	100.0
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	100.0
TIGR00946	321	2a69 he Auxin Efflux Carrier (AEC) Family.	99.78
COG0679	311	Predicted permeases [General function prediction o	99.73
PRK09903	314	putative transporter YfdV; Provisional	99.66
TIGR00841	286	bass bile acid transporter. Functionally character	97.51
PF01758	187	SBF: Sodium Bile acid symporter family; InterPro:	93.53
COG0385	319	Predicted Na+-dependent transporter [General funct	90.83
PF13593	313	DUF4137: SBF-like CPA transporter family (DUF4137)	89.29
TIGR00832	328	acr3 arsenical-resistance protein. The first prote	86.44

>KOG2722 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=9.8e-97  Score=711.17  Aligned_cols=325  Identities=48%  Similarity=0.911  Sum_probs=272.1

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCCCcCeeEEEeecCCcChhHHHHHHHHhhccCCCCCChhhhhhhhhHHHHHHhh
Q 018889            1 MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMA   80 (349)
Q Consensus         1 mPvn~llt~~iG~~lGwlv~~i~~~P~~~~~~vv~~~~~GN~gnLPl~lv~slc~~~~~PFg~~d~c~~~GiaYis~~~~   80 (349)
                      ||||+++||++|+++||+++|++|||+++|||+++||+|||+||||+++++|+|++|++||||+|+|++||++|++||||
T Consensus        78 iPVnv~Lt~~ig~liG~lv~~I~rppp~~~~fiia~~a~GN~gnlpL~Lv~alc~~~~~Pfg~~~~c~s~Gi~Y~sf~~~  157 (408)
T KOG2722|consen   78 IPVNVGLTFIIGSLIGWLVVKILRPPPQLRGFIIACCAFGNSGNLPLILVPALCDEDGIPFGNREKCASRGISYVSFSQQ  157 (408)
T ss_pred             hHHHHHHHHHHHHHHHHHHhheecCChhhcCeEEEEeecCCcCCcHHHHhHHHhcccCCCCCChhhhhhcchhHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcceeEEeeeccccccchh-hhhhhhcCCCCCCCCcccCccccchhhhhcccCCCC---CcccchhhccCCCCCCCcccc
Q 018889           81 LGGFFIWSYSYQLIKQSSV-RYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTD---DQEDVSVLVASTKSSSDPECQ  156 (349)
Q Consensus        81 lg~i~~wt~~y~llr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  156 (349)
                      +|++++|||+||++.+++. ++...+++ +++...          ++-. .+..++   +++++..+    +..++++.+
T Consensus       158 lg~il~wty~Y~~~~~p~~~~~~~~~~~-~Ve~~~----------~~~~-~~s~e~~~~~~~k~~ll----~~~en~~~~  221 (408)
T KOG2722|consen  158 LGQILRWTYVYRMLLPPNLELMSALKES-PVEALL----------ESVP-QPSVESDEDSTCKTLLL----ASKENRNNQ  221 (408)
T ss_pred             hhhhEEEEEEeeeecCCchhhhhcCChh-hhhhhh----------hccC-CCCcccccccccccccc----cccccCCCc
Confidence            9999999999997766532 22222211 111110          0000 000001   11111111    111111111


Q ss_pred             cccccccccchhhhhhhHhHHHHHH-HHHHHhhChhHHHHHHHHHHhchhhhhHhhcCCCCchhHHHHHHHHhcCcchhH
Q 018889          157 IIVPQASHLQTRKESFWKRSLEFLH-QLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPC  235 (349)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~PPtia~ilg~iVG~VppLr~l~f~~~apL~~i~~s~~~lG~a~IP~  235 (349)
                              ...++.+.++|.+...+ ..++++++|||||+++|+++|+||||||++||++||||+|||+++++|+++|||
T Consensus       222 --------~~g~~~~~~~~~~~~~~~~~L~~i~~Pptia~iiA~vigai~pLr~lifg~~apl~~itdsv~llG~~~IP~  293 (408)
T KOG2722|consen  222 --------VVGREGKVKRRSVSLSEKVILKEIFAPPTIAAIIALVIGAIPPLRRLIFGEDAPLRVITDSVTLLGDGAIPC  293 (408)
T ss_pred             --------eeeccccceEEEeehhHHhhHHHhcCchHHHHHHHHHHhcchHHHHHhhccCchHHHHHHHHHHhccccchh
Confidence                    11122333444443333 349999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcccccccccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCC-CChHHHHHHHhhccCchhhHHHHHHHh
Q 018889          236 ITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLP-SDPLYHYVLMVQFTLPPAMNIGTMTQL  314 (349)
Q Consensus       236 illvLGanL~~g~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~-~Dp~~~fVl~l~~~~P~Ai~~~~i~ql  314 (349)
                      |+++|||||++|+++|.++.++++|++++|||++|+.|+++|..|+|+|+++ |||+|+||++||+++|||||++|||||
T Consensus       294 illvLGgnL~~g~~ss~~~~~~iigiii~R~illP~~gl~iv~~A~kl~~ls~~DPlF~~VllLq~~~PpAi~lg~itqL  373 (408)
T KOG2722|consen  294 ILLVLGGNLIQGLRSSALKTSVIIGIIIGRYILLPLVGLGIVRLADKLGLLSTDDPLFQFVLLLQYASPPAINLGTITQL  373 (408)
T ss_pred             hhhhhccccccCchhcccCceEEEEEEEeeeeccchhhHHHHHHHHHhCcCCCCCchhhhhhhhhhcCCchhhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018889          315 FDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS  349 (349)
Q Consensus       315 ~~~~e~e~s~ilfw~Y~~~~~~lt~w~~~~~~l~~  349 (349)
                      ||++|+|||+||||+|+++++++|+|+++|+|++.
T Consensus       374 ~g~~e~Ecs~il~W~y~va~l~ltvw~~~f~~lv~  408 (408)
T KOG2722|consen  374 NGVAERECSVILFWTYAVASLSLTVWSVFFLWLVV  408 (408)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999973

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=100.00  E-value=5.6e-38  Score=309.56  Aligned_cols=314  Identities=27%  Similarity=0.438  Sum_probs=228.1

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCCCcCeeEEEeecCCcChhHHHHHHHHhhccCCCCCChhhhhhhhhHHHHHHhh
Q 018889            1 MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMA   80 (349)
Q Consensus         1 mPvn~llt~~iG~~lGwlv~~i~~~P~~~~~~vv~~~~~GN~gnLPl~lv~slc~~~~~PFg~~d~c~~~GiaYis~~~~   80 (349)
                      +|++..+.+++++++||++.|++|.|++.|+..+.||+++|.|++|+.++.+++.+             +|++|+.++..
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~lglpi~~~l~g~-------------~~~~~~~~~~~  131 (385)
T PF03547_consen   65 IPVFAFIIFILGLLLGFLLSRLFRLPKEWRGVFVLAASFGNTGFLGLPILQALFGE-------------RGVAYAIIFDV  131 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcccceEEEecccCCcchhhHHHHHHHHhcc-------------hhhhhehHHHH
Confidence            35678899999999999999999999999999999999999999999999999997             88999999999


Q ss_pred             hcceeEEeeeccccccchhhhhhhhcCC-CCCCCCc-ccCccccchhhhhcccCCCCCc--cc-chhhccCCCCCCCccc
Q 018889           81 LGGFFIWSYSYQLIKQSSVRYKALAQAA-EPEEVPK-EVNKDFDANAQTQLLRGTTDDQ--ED-VSVLVASTKSSSDPEC  155 (349)
Q Consensus        81 lg~i~~wt~~y~llr~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~  155 (349)
                      ++.++.|++++.+++.+.++.++.++++ +.+...+ +..+++...+++.  +...+++  ++ ..... +.+...+.+.
T Consensus       132 ~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~  208 (385)
T PF03547_consen  132 VNNIILWSLGYFLLESRSEKEDKSEEEPSSAESIDSEQEDSDEMSLDGSS--PSSTEEEIDEDGSPSST-PSQSSASAPS  208 (385)
T ss_pred             hhHHHHHHHHHHhhcccccccccccccccccccccccccCCccccCCccc--ccccccccccCCccccc-ccccccccch
Confidence            9999999999998877644322111110 0000000 0000000000000  0001100  00 00000 0000000000


Q ss_pred             cccc-ccccccchhhhhhhHhHHHHH-HHHHHHhhChhHHHHHHHHHHhchhhhhHhhcCCCCchhHHHHHHHHhcCcch
Q 018889          156 QIIV-PQASHLQTRKESFWKRSLEFL-HQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTI  233 (349)
Q Consensus       156 ~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~PPtia~ilg~iVG~VppLr~l~f~~~apL~~i~~s~~~lG~a~I  233 (349)
                      .... .+.+.....+.+.+++.++.. +..++.++|||++|+++|++++++|++|+++++     .+++++++++|++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nP~~~a~~lgli~~~~~~~~~~~~~-----~~i~~~~~~lg~~~~  283 (385)
T PF03547_consen  209 SVSTSPSPSNSTGAEQKSSNSTRKKLKKSILKLFKNPPLIAIILGLIIGLIPPLRPLFFP-----SFITDSLSYLGAAAV  283 (385)
T ss_pred             hhccCCcccccchhhhhhhhhHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcccchH-----hHHHHHHHHHHhhhH
Confidence            0000 000000011122222222222 233788999999999999999999999999998     799999999999999


Q ss_pred             hHHHHhhhcccccccccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHHHHH
Q 018889          234 PCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQ  313 (349)
Q Consensus       234 P~illvLGanL~~g~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~i~q  313 (349)
                      |+.++++|++|+++++....+.+.....++.|++++|++++++++...      -|+....+++++.++|||++...++|
T Consensus       284 pl~l~~lG~~l~~~~~~~~~~~~~~~~~~~~rlii~P~i~~~~~~~~~------l~~~~~~~~~~~~~~P~a~~~~~~a~  357 (385)
T PF03547_consen  284 PLALFVLGASLARGPRKSALGWKPSIIAVLVRLIILPLIGIGIVFLLG------LDGDMARVLILQAAMPTAINSFVIAS  357 (385)
T ss_pred             HHHHHHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHhccCCchHHHHHHHH
Confidence            999999999999998888888888888899999999999999988654      36667889999999999999999999


Q ss_pred             hccchhhhHHHHHHHHHHHHHHHHHHHH
Q 018889          314 LFDVAQEECSVLFLWTYLVAALALTGWS  341 (349)
Q Consensus       314 l~~~~e~e~s~ilfw~Y~~~~~~lt~w~  341 (349)
                      +||.+++++|.+++|+|+++.+++++|+
T Consensus       358 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~  385 (385)
T PF03547_consen  358 LYGLDEEEASSIVFWSTLLSIPTLPLWI  385 (385)
T ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999999999999995

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family

Probab=99.78  E-value=4.2e-18  Score=165.52  Aligned_cols=241  Identities=20%  Similarity=0.189  Sum_probs=183.6

Q ss_pred             HHHHHHHHHHHHHHH-HhCCCCCCcCeeEEEeecCCcChhHHHHHHHHhhccCCCCCChhhhhhhhhHHHHHHhhhccee
Q 018889            7 MTFLIGGILGWIVVK-LLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFF   85 (349)
Q Consensus         7 lt~~iG~~lGwlv~~-i~~~P~~~~~~vv~~~~~GN~gnLPl~lv~slc~~~~~PFg~~d~c~~~GiaYis~~~~lg~i~   85 (349)
                      ..+.+.++++|++.| .+|.+++.++....++.++|.|++-+-++.++-.+++..          .+.|+.++.....++
T Consensus        76 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~GlPl~~~~~G~~~~~----------~~~~~~~~~~~~~~~  145 (321)
T TIGR00946        76 GAFSGSYALIWLITKPLFKADYGKLSGFLLVSALPNTAFIGYPLLLSLFGEEGAK----------ILIAALFIDTGAVLM  145 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccchhhHHHHHhhhccceeehHHHHHHHhcccchh----------hhHHHHHHHhccchh
Confidence            455667888999999 889999999999999999999999999999998764420          245555555444567


Q ss_pred             EEeeeccccccchhhhhhhhcCCCCCCCCcccCccccchhhhhcccCCCCCcccchhhccCCCCCCCccccccccccccc
Q 018889           86 IWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHL  165 (349)
Q Consensus        86 ~wt~~y~llr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (349)
                      .|++++-+.....      +.+                  ++                                      
T Consensus       146 ~~~~~~~~~~~~~------~~~------------------~~--------------------------------------  163 (321)
T TIGR00946       146 TIALGLFLVSEDG------AGG------------------EG--------------------------------------  163 (321)
T ss_pred             HHHHHHHHhcccc------ccc------------------cc--------------------------------------
Confidence            8888864332110      000                  00                                      


Q ss_pred             chhhhhhhHhHHHHHHHHHH-HhhChhHHHHHHHHHHhchhhhhHhhcCCCCch-hHHHHHHHHhcCcchhHHHHhhhcc
Q 018889          166 QTRKESFWKRSLEFLHQLLE-ELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPL-RVIQDSIEILGDGTIPCITLILGGN  243 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~l~-~~~~PPtia~ilg~iVG~VppLr~l~f~~~apL-~~i~~s~~~lG~a~IP~illvLGan  243 (349)
                        +..+.+++.    .+.++ -+-||+++|.++|+++.....          ++ .++.++++++|++++|+.++++|..
T Consensus       164 --~~~~~~~~~----~~~~~~~~~nP~iia~i~Gl~~~~~~i----------~lP~~l~~~l~~lg~~~~plaLl~lG~~  227 (321)
T TIGR00946       164 --SGESTRLML----IFVWKKLIKFPPLWAPLLSVILSLVGF----------KMPGLILKSISILSGATTPMALFSLGLA  227 (321)
T ss_pred             --cchhHHHHH----HHHHHHHHhCCChHHHHHHHHHHHHhh----------cCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence              000111111    12233 346899999999999988752          13 5899999999999999999999998


Q ss_pred             cccccccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHHHHHhccchhhhHH
Q 018889          244 LIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECS  323 (349)
Q Consensus       244 L~~g~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~i~ql~~~~e~e~s  323 (349)
                      |..  ++.+.+.+.+...++.|+++.|++...+.+.      ++-|+..+-++.++.++|+|.|...+++.||.++++.+
T Consensus       228 l~~--~~~~~~~~~~~~~~~~klil~P~i~~~~~~~------~~l~~~~~~~~vl~aa~P~a~~~~i~A~~y~~~~~~aa  299 (321)
T TIGR00946       228 LSP--RKIKLGVRDAILALIVRFLVQPAVMAGISKL------IGLRGLELSVAILQAALPGGAVAAVLATEYEVDVELAS  299 (321)
T ss_pred             hCh--hhhccChHHHHHHHHHHHHHHHHHHHHHHHH------hCCChHHHHHHHHHHcCChhhHHHHHHHHhCCCHHHHH
Confidence            864  2333455778888999999999999777653      34478889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 018889          324 VLFLWTYLVAALALTGWSMV  343 (349)
Q Consensus       324 ~ilfw~Y~~~~~~lt~w~~~  343 (349)
                      ...+++.+++.+++++|+.+
T Consensus       300 ~~v~~sT~ls~~tlp~~~~l  319 (321)
T TIGR00946       300 TAVTLSTVLSLISLPLFIIL  319 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999875

>COG0679 Predicted permeases [General function prediction only]

Probab=99.73  E-value=2.9e-17  Score=159.68  Aligned_cols=239  Identities=21%  Similarity=0.307  Sum_probs=186.0

Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCCCcCeeEEEeecCCcChhHHHHHHHHhhccCCCCCChhhhhhhhhHHHHHHhhhcce
Q 018889            5 VAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGF   84 (349)
Q Consensus         5 ~llt~~iG~~lGwlv~~i~~~P~~~~~~vv~~~~~GN~gnLPl~lv~slc~~~~~PFg~~d~c~~~GiaYis~~~~lg~i   84 (349)
                      .+.+.+.+.+..++..|++|.+++++.....+.+++|.|++++-+..++=.             +.|++|++++++++++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~g~lg~pi~~~~~G-------------~~gl~~~~i~~~~~~~  137 (311)
T COG0679          71 LVATLLAFFLLALIGRFLFKLDKRETVIFALASAFPNIGFLGLPVALSLFG-------------EKGLAYAVIFLIIGLF  137 (311)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhcccchhhHHHHHHHcC-------------cchHHHHHHHHHHHHH
Confidence            445555666666677778888888899999999999999999665544433             2469999999999999


Q ss_pred             eEEeeeccccccchhhhhhhhcCCCCCCCCcccCccccchhhhhcccCCCCCcccchhhccCCCCCCCcccccccccccc
Q 018889           85 FIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASH  164 (349)
Q Consensus        85 ~~wt~~y~llr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (349)
                      ++|++++.++.+..+       +                   .                                     
T Consensus       138 ~~~~~g~~~l~~~~~-------~-------------------~-------------------------------------  154 (311)
T COG0679         138 LMFTLGVILLARSGG-------G-------------------T-------------------------------------  154 (311)
T ss_pred             HHHHHHHHHHHHhcC-------C-------------------c-------------------------------------
Confidence            999999986643310       0                   0                                     


Q ss_pred             cchhhhhhhHhHHHHHHHHHHHhhChhHHHHHHHHHHhchhhhhHhhcCCCCchhHHHHHHHHhcCcchhHHHHhhhccc
Q 018889          165 LQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNL  244 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~l~~~~~PPtia~ilg~iVG~VppLr~l~f~~~apL~~i~~s~~~lG~a~IP~illvLGanL  244 (349)
                        +  .+.++       ...+-+.||+.+|.++|+++....    .-++     ..+.++++++|++++|++++++|..|
T Consensus       155 --~--~~~~~-------~~~~~~~nP~i~a~i~g~~~~~~~----i~lP-----~~~~~~~~~l~~a~~pl~li~lG~~L  214 (311)
T COG0679         155 --N--KSLLS-------VLKKLLTNPLIIALILGLLLNLLG----ISLP-----APLDTAVDLLASAASPLALIALGLSL  214 (311)
T ss_pred             --h--hHHHH-------HHHHHHhCcHHHHHHHHHHHHHcC----CCCc-----HHHHHHHHHHHHhhhhHHHHHHhhhc
Confidence              0  00111       113455789999999999887654    1111     38999999999999999999999999


Q ss_pred             ccccccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHHHHHhccchhhhHHH
Q 018889          245 IQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSV  324 (349)
Q Consensus       245 ~~g~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~i~ql~~~~e~e~s~  324 (349)
                      .. .+.++.+.+.+......|+++.|++...+.+..   | +  ++....|+.++.++|+|.|...+++.||.+++..+.
T Consensus       215 ~~-~~~~~~~~~~~~~~~~~kll~~Pl~~~~~~~~~---~-l--~~~~~~v~vl~~a~P~A~~~~v~a~~~~~~~~laa~  287 (311)
T COG0679         215 AF-LKLKGSKPPIILIALSLKLLLAPLVALLVAKLL---G-L--SGLALQVLVLLSAMPTAVNAYVLARQYGGDPRLAAS  287 (311)
T ss_pred             ch-hhhccccchhHHHHHHHHHHHHHHHHHHHHHHc---C-C--ChHHHHHHHHHhhCcHHhHHHHHHHHhCCChHHHHH
Confidence            87 444666778888888889999999999976643   2 3  444458999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 018889          325 LFLWTYLVAALALTGWSMVYMW  346 (349)
Q Consensus       325 ilfw~Y~~~~~~lt~w~~~~~~  346 (349)
                      ..+-+-.++.++++.|..++.+
T Consensus       288 ~i~ist~ls~~t~p~~~~~l~~  309 (311)
T COG0679         288 TILLSTLLSLLTLPLLILLLLR  309 (311)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            8889999999999888877665

>PRK09903 putative transporter YfdV; Provisional

Probab=99.66  E-value=1.7e-15  Score=147.15  Aligned_cols=236  Identities=16%  Similarity=0.149  Sum_probs=173.3

Q ss_pred             hHHHHHHHHHHHHHHH-HhCCCCCCcCeeEEEeecCCcChhHHHHHHHHhhccCCCCCChhhhhhhhhHHHHHHhhhcce
Q 018889            6 AMTFLIGGILGWIVVK-LLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGF   84 (349)
Q Consensus         6 llt~~iG~~lGwlv~~-i~~~P~~~~~~vv~~~~~GN~gnLPl~lv~slc~~~~~PFg~~d~c~~~GiaYis~~~~lg~i   84 (349)
                      .+++++.++++|++.| ..|-+++.++....+++++|.|++-+-++.++-.+++.          -|+.|..++. +.++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~gf~G~Pl~~~~~G~~~~----------~~~~~a~~~~-~~~~  140 (314)
T PRK09903         72 LVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYGDSVS----------TGLVVAIISI-IVNA  140 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcchhhHhhhhhcCCCcccccHHHHHHHcCchhh----------hhhHHHHHHH-HHHH
Confidence            4556667778888765 66777777778888889999999999999998765322          1455554433 5677


Q ss_pred             eEEeeeccccccchhhhhhhhcCCCCCCCCcccCccccchhhhhcccCCCCCcccchhhccCCCCCCCcccccccccccc
Q 018889           85 FIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASH  164 (349)
Q Consensus        85 ~~wt~~y~llr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (349)
                      +.|+++.-+++..+.     +++                                                         
T Consensus       141 ~~~~~g~~~~~~~~~-----~~~---------------------------------------------------------  158 (314)
T PRK09903        141 ITIPIGLYLLNPSSG-----ADG---------------------------------------------------------  158 (314)
T ss_pred             HHHHHHHHHHccccc-----ccc---------------------------------------------------------
Confidence            888888655532200     000                                                         


Q ss_pred             cchhhhhhhHhHHHHHHHHHHHhhChhHHHHHHHHHHhchhhhhHhhcCCCCch-hHHHHHHHHhcCcchhHHHHhhhcc
Q 018889          165 LQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPL-RVIQDSIEILGDGTIPCITLILGGN  243 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~l~~~~~PPtia~ilg~iVG~VppLr~l~f~~~apL-~~i~~s~~~lG~a~IP~illvLGan  243 (349)
                        + +...++.+       .+-+-||+.+|.++|+++-..        +-  ++ .++.++++++|++++|+.++.+|+.
T Consensus       159 --~-~~~~~~~l-------~~~~~nP~iia~~~gl~~~l~--------~i--~lP~~i~~~l~~lg~~~~PlaL~~iG~~  218 (314)
T PRK09903        159 --K-KNSNLSAL-------ISAAKEPVVWAPVLATILVLV--------GV--KIPAAWDPTFNLIAKANSGVAVFAAGLT  218 (314)
T ss_pred             --c-cchHHHHH-------HHHHhchHHHHHHHHHHHHHc--------CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              0 00001111       233568999999999986542        21  22 5999999999999999999999999


Q ss_pred             cccccccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHHHHHhccchhhhHH
Q 018889          244 LIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECS  323 (349)
Q Consensus       244 L~~g~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~i~ql~~~~e~e~s  323 (349)
                      |++...+.  . +.+....+.|+++.|++...+...      .+-|+...-++.++.++|+|.+...+++.||.+.+.++
T Consensus       219 L~~~~~~~--~-~~~~~~~~~Kli~~P~i~~~~~~~------~~l~~~~~~v~vl~aa~P~a~~~~i~A~~y~~~~~~aa  289 (314)
T PRK09903        219 LAAHKFEF--S-AEIAYNTFLKLILMPLALLLVGMA------CHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGT  289 (314)
T ss_pred             Hhhccccc--c-HHHHHHHHHHHHHHHHHHHHHHHH------cCCCcHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHH
Confidence            98754322  2 344567788999999988665543      23367778899999999999999999999998888888


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 018889          324 VLFLWTYLVAALALTGWSMV  343 (349)
Q Consensus       324 ~ilfw~Y~~~~~~lt~w~~~  343 (349)
                      ...+.+.+++.+++++|+.+
T Consensus       290 ~~v~~sTlls~iTlpl~~~l  309 (314)
T PRK09903        290 ASLAVSVLGFVVTAPLWIYV  309 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            88899999999999999986

>TIGR00841 bass bile acid transporter

Probab=97.51  E-value=0.00035  Score=67.51  Aligned_cols=108  Identities=16%  Similarity=0.146  Sum_probs=89.4

Q ss_pred             hhHHHHhhhcccccc-cccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHHH
Q 018889          233 IPCITLILGGNLIQG-LRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTM  311 (349)
Q Consensus       233 IP~illvLGanL~~g-~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~i  311 (349)
                      +..+++.+|.+|... .++...+++.+....+.|++++|+++.++.+.      .+.||.+...+++..++|+|.+...+
T Consensus        14 l~~~m~~~G~~l~~~~~~~~~~~p~~~~~~~~~~~vi~Plla~~l~~~------~~l~~~~~~glvL~~~~P~~~~s~v~   87 (286)
T TIGR00841        14 LFLIMFSMGCTLEFEDFKGHLRKPWGVIIGLLAQYGIMPLTGFLLAKV------FKLPPELAVGVLIVGCCPGGTASNVF   87 (286)
T ss_pred             HHHHHHHccCCCcHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH------hCCCHHHHHHHHheeeCCCchHHHHH
Confidence            677889999999742 22333345677788889999999999888653      24689999999999999999999999


Q ss_pred             HHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018889          312 TQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMW  346 (349)
Q Consensus       312 ~ql~~~~e~e~s~ilfw~Y~~~~~~lt~w~~~~~~  346 (349)
                      ++++|-..+..+++...+-+++++++++|..+|..
T Consensus        88 t~~~~gn~~la~~~~~~stlls~vt~Pl~l~~~~~  122 (286)
T TIGR00841        88 TYLLKGDMALSISMTTCSTLLALGMMPLLLYIYAK  122 (286)
T ss_pred             HHHhCCCHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998777777888889999999999999988864

Functionally characterized members of the BASS family catalyze Na+:bile acid symport. These systems have been identified in intestinal, liver and kidney tissues of animals. These symporters exhibit broad specificity, taking up a variety of non bile organic compounds as well as taurocholate and other bile salts. Functionally uncharacterised homologues are found in plants, yeast, archaea and bacteria.

>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes

Probab=93.53  E-value=0.22  Score=44.86  Aligned_cols=108  Identities=16%  Similarity=0.201  Sum_probs=74.0

Q ss_pred             hhHHHHhhhccccc-ccccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHHH
Q 018889          233 IPCITLILGGNLIQ-GLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTM  311 (349)
Q Consensus       233 IP~illvLGanL~~-g~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~i  311 (349)
                      +-.+++.+|-++-. -.++..-++|.++...+..++++|+++.++.+.     +.+.||-+..-+++..+.|.+...-..
T Consensus         4 l~~~mf~~gl~~~~~~l~~~~~~p~~l~~~l~~~~~i~Plla~~l~~~-----~~~~~~~~~~Gl~l~~~~P~~~~s~~~   78 (187)
T PF01758_consen    4 LFLMMFSMGLSLTFEDLRRVLRRPKLLLIGLLAQFLIMPLLAFGLAWL-----LLPLSPALALGLLLVAACPGGPASNVF   78 (187)
T ss_dssp             HHHHHHHHHHC--GGGGHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-H-----HTT--HHHHHHHHHHHHS-B-THHHHH
T ss_pred             hhHHHHHhhhcccHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCHHHHHHHHHHhcCCcHHHHHHH
Confidence            34566777777642 122222245777788889999999999999733     256799999999999999999998888


Q ss_pred             HHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018889          312 TQLFDVAQEECSVLFLWTYLVAALALTGWSMVYM  345 (349)
Q Consensus       312 ~ql~~~~e~e~s~ilfw~Y~~~~~~lt~w~~~~~  345 (349)
                      +.+-|-..+-.-+.....-+++.+.+++|..+|.
T Consensus        79 t~l~~Gd~~ls~~lt~istll~~~~~P~~~~l~~  112 (187)
T PF01758_consen   79 TYLAGGDVALSVSLTLISTLLAPFLMPLLLYLLS  112 (187)
T ss_dssp             HHHTT--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCcccccceeeHHHHHHHHHHHHHHHHHh
Confidence            8886633333334556788999999999988775

They are related to the human bile acid:sodium symporters, which are transmembrane proteins functioning in the liver in the uptake of bile acids from portal blood plasma, a process mediated by the co-transport of Na+ []. In yeast, overexpression of the ACR3 gene confers an arsenite- but not an arsenate-resistance phenotype [].; GO: 0008508 bile acid:sodium symporter activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 3ZUX_A 3ZUY_A.

>COG0385 Predicted Na+-dependent transporter [General function prediction only]

Probab=90.83  E-value=1.1  Score=44.21  Aligned_cols=108  Identities=13%  Similarity=0.161  Sum_probs=78.9

Q ss_pred             chhHHHHhhhcccccc-cccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHH
Q 018889          232 TIPCITLILGGNLIQG-LRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGT  310 (349)
Q Consensus       232 ~IP~illvLGanL~~g-~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~  310 (349)
                      .+-.+++.+|..|..- .+..--+++..+.+.+.-++++|++++++.+.      ++-||-..-=+++..|.|...+.-.
T Consensus        43 ~l~lImf~mGl~Ls~~d~~~~~~~p~~vligl~~qfvlmPlla~~~~~~------~~l~~~l~~Gl~ll~~~Pggv~S~~  116 (319)
T COG0385          43 ALALIMFGMGLTLSREDFLAGLKHPRLVLIGLAAQFVLMPLLALLLAKL------FPLPPELAVGLLLLGCCPGGVASNA  116 (319)
T ss_pred             HHHHHHHhcCCCCCHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHhHHheeeCCCchhHHH
Confidence            4556788888888642 22233456777888899999999999999874      3357777777888999999999999


Q ss_pred             HHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018889          311 MTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYM  345 (349)
Q Consensus       311 i~ql~~~~e~e~s~ilfw~Y~~~~~~lt~w~~~~~  345 (349)
                      +|++.+-.-.-+-..-.-+-+++++..+++..+|+
T Consensus       117 ~t~lAkGnValsV~~tsvStll~~f~tPllv~l~~  151 (319)
T COG0385         117 MTYLAKGNVALSVCSTSVSTLLGPFLTPLLVGLLA  151 (319)
T ss_pred             HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99996533222222334677788888888887765

>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)

Probab=89.29  E-value=2.5  Score=41.57  Aligned_cols=140  Identities=16%  Similarity=0.210  Sum_probs=92.8

Q ss_pred             hHHHHHHHHHHhchhhhhHhhcCCCCchhHHH-HHHHHhcCcchhHHHHhhhccccc-ccccCCCCCeeehhhhhHHHHH
Q 018889          191 PTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQ-DSIEILGDGTIPCITLILGGNLIQ-GLRSSTLKPLIIIAVVCVRYIA  268 (349)
Q Consensus       191 Ptia~ilg~iVG~VppLr~l~f~~~apL~~i~-~s~~~lG~a~IP~illvLGanL~~-g~~~s~~~~~~i~~i~~~R~il  268 (349)
                      -+++.++++..|..-|-.    |  .....+. +...   ...|..+.++-|.+|-. ..+..--++|..+.+...=+++
T Consensus         3 fl~~l~~ai~la~~~P~~----g--~~~~~~~~~~~~---~~~v~~iFf~~Gl~L~~~~l~~~~~~~~~~l~~~~~~fvl   73 (313)
T PF13593_consen    3 FLLGLLLAILLAYLFPAP----G--AAGGVIKPEYVI---KYGVALIFFISGLSLPTEELKAALRNWRLHLFVQAFNFVL   73 (313)
T ss_pred             hHHHHHHHHHHHHHcCcc----c--ccCCccchhhhH---HHHHHHHHHHHcCCCCHHHHHHHHhcchHHHHHHHHHHHH
Confidence            355666666666544332    1  1111221 1222   23388899999988863 2223344567778888999999


Q ss_pred             hhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHH-HHHHhcc-chhhh-HHHHHHHHHHHHHHHHHHHHHHHH
Q 018889          269 LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIG-TMTQLFD-VAQEE-CSVLFLWTYLVAALALTGWSMVYM  345 (349)
Q Consensus       269 lP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~-~i~ql~~-~~e~e-~s~ilfw~Y~~~~~~lt~w~~~~~  345 (349)
                      .|+++.++......  +  .|+-+..=+++..|+||.++.+ .+|++-| +-... +.+.  -+-++.++..++|+.+|+
T Consensus        74 ~Pll~~~~~~l~~~--~--~~~~l~~Gl~~~~~lPtTv~S~v~~T~~AgGN~a~Al~~~~--~snllgv~ltP~ll~l~l  147 (313)
T PF13593_consen   74 FPLLGFGLSRLFPA--F--LPPELALGLLILACLPTTVSSSVVLTRLAGGNVALALFNAV--LSNLLGVFLTPLLLLLLL  147 (313)
T ss_pred             HHHHHHHHHHHhhc--c--CCHHHHHHHHHHhhCCchhhHHHHHHHHcCCCHHHHHHHHH--HHhhhhHhHHHHHHHHHh
Confidence            99999999886542  1  3566888899999999998886 4777644 33222 3332  578888999999998876

>TIGR00832 acr3 arsenical-resistance protein

Probab=86.44  E-value=3.7  Score=40.55  Aligned_cols=106  Identities=12%  Similarity=0.019  Sum_probs=74.5

Q ss_pred             HHHHhhhccccc-ccccCCCCCeeehhhhhHHHHHhhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHHHHH
Q 018889          235 CITLILGGNLIQ-GLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQ  313 (349)
Q Consensus       235 ~illvLGanL~~-g~~~s~~~~~~i~~i~~~R~illP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~i~q  313 (349)
                      .+++.+|-+|.. -.+...-++|.++...+.-++++|+++.++.+..     .+.+|-+..=+++..|.|.+...-.+|.
T Consensus        51 ~mmf~mgl~L~~~df~~~~~~pk~~~~~~~~qfvi~Plla~~l~~l~-----~~~~p~l~~GliLv~~~Pgg~~S~v~T~  125 (328)
T TIGR00832        51 LMMYPPLAKVDYSALGDVFKDPKGLILSLFINWIIGPFLMFLLAWLF-----LRDLFEYIAGLILLGLARCIAMVFVWNQ  125 (328)
T ss_pred             HHHHHhhhcCCHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHhcchHHHHHHHHH
Confidence            477888888852 2333333567788889999999999999997742     3567889999999999999987777777


Q ss_pred             hccchhhhHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 018889          314 LFDVAQEECSVLF-LWTYLVAALALTGWSMVYMW  346 (349)
Q Consensus       314 l~~~~e~e~s~il-fw~Y~~~~~~lt~w~~~~~~  346 (349)
                      +.+ |+...|..+ -..-+++.+.++.+..+|+.
T Consensus       126 lAk-Gnvalsv~lt~~stLl~~~~~P~l~~ll~~  158 (328)
T TIGR00832       126 LAK-GDPEYTLVLVAVNSLFQVFLYAPLAWLLLG  158 (328)
T ss_pred             HcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            654 333433333 46666677777676665553

The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	349
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.8 bits (123), Expect = 2e-07
 Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 85/281 (30%)

Query: 23  LRPKPH--LEG--------LVIATCASG-------------NLGN-----LLLIIVPAIC 54
           LRP  +  ++G        + +  C S              NL N      +L ++  + 
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206

Query: 55  HEQGSPFGNR-DVCSSVGLSYASFSMALGGFFI-WSYSYQLIKQSSVRYKALAQAAEPEE 112
           ++    + +R D  S++ L   S    L        Y   L+   +V+      A     
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA----- 261

Query: 113 VPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESF 172
                   F+ + +  LL  TT  ++    L A+T         I +   S   T  E  
Sbjct: 262 --------FNLSCKI-LL--TTRFKQVTDFLSAAT------TTHISLDHHSMTLTPDEV- 303

Query: 173 WKRSL--EFLHQLLEELLAPPTLAAIVGF---IFGAVV------WLRNLIIGDSAPLRVI 221
             +SL  ++L    ++L  P  +         I    +      W     +       +I
Sbjct: 304 --KSLLLKYLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359

Query: 222 QDSIEILG----------------DGTIPCITL-ILGGNLI 245
           + S+ +L                    IP I L ++  ++I
Sbjct: 360 ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	349
3zux_A	332	Transporter, ASBTNM; transport protein, membrane p	97.44

>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*

Probab=97.44  E-value=0.00046  Score=66.61  Aligned_cols=137  Identities=12%  Similarity=-0.051  Sum_probs=100.0

Q ss_pred             hhHHHHHHHHHHhchhhhhHhhcCCCCchhHHHHHHHHhcCcchhHHHHhhhcccccc-cccCCCCCeeehhhhhHHHHH
Q 018889          190 PPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQG-LRSSTLKPLIIIAVVCVRYIA  268 (349)
Q Consensus       190 PPtia~ilg~iVG~VppLr~l~f~~~apL~~i~~s~~~lG~a~IP~illvLGanL~~g-~~~s~~~~~~i~~i~~~R~il  268 (349)
                      +-++..+++.++|..-|=.-.      .+.   .    .-...+..+++.+|.++... .+...-++|.+....+.++++
T Consensus        19 ~~~l~i~~~~~lg~~~P~~~~------~~~---~----~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~vi   85 (332)
T 3zux_A           19 TFSLWAALFAAAAFFAPDTFK------WAG---P----YIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAI   85 (332)
T ss_dssp             THHHHHHHHHHHHHHCGGGTG------GGG---G----GHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcchhhh------hhH---H----HHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHHH
Confidence            346666777777765432111      111   1    11246789999999999632 222222456677788899999


Q ss_pred             hhhhHHHHHHHHHHhCCCCCChHHHHHHHhhccCchhhHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018889          269 LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYM  345 (349)
Q Consensus       269 lP~ig~~iv~~~~~~~~i~~Dp~~~fVl~l~~~~P~Ai~~~~i~ql~~~~e~e~s~ilfw~Y~~~~~~lt~w~~~~~  345 (349)
                      +|+++.++.+.      ++.||.+...+++..|.|++.+...+|++.|-..+-..+....+-+++++.+++|..+|+
T Consensus        86 ~Pll~~~l~~~------~~l~~~~~~Glil~~~~P~~~~s~v~t~~a~Gd~~la~~~~~~stll~~~~~Pl~~~l~~  156 (332)
T 3zux_A           86 MPATAWCLSKL------LNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLA  156 (332)
T ss_dssp             HHHHHHHHHHH------TTCCHHHHHHHHHHHHSCCCTHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH------hCCChHHHHHHHHHhcCCchhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999998764      266999999999999999999999999998855555666677899999999999988775

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00