Citrus Sinensis ID: 018917
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| 317106736 | 444 | JHL06P13.13 [Jatropha curcas] | 0.994 | 0.781 | 0.864 | 0.0 | |
| 224073734 | 437 | predicted protein [Populus trichocarpa] | 0.991 | 0.791 | 0.817 | 1e-174 | |
| 356519361 | 386 | PREDICTED: DUF246 domain-containing prot | 0.994 | 0.898 | 0.824 | 1e-173 | |
| 449436132 | 441 | PREDICTED: DUF246 domain-containing prot | 0.994 | 0.786 | 0.815 | 1e-172 | |
| 255553137 | 441 | conserved hypothetical protein [Ricinus | 0.959 | 0.759 | 0.844 | 1e-172 | |
| 225443013 | 476 | PREDICTED: DUF246 domain-containing prot | 0.994 | 0.728 | 0.808 | 1e-171 | |
| 297743429 | 443 | unnamed protein product [Vitis vinifera] | 0.994 | 0.783 | 0.808 | 1e-171 | |
| 356528958 | 440 | PREDICTED: DUF246 domain-containing prot | 0.994 | 0.788 | 0.801 | 1e-169 | |
| 5903043 | 399 | Similar to gb|X80301 auxin-independent g | 0.994 | 0.869 | 0.786 | 1e-167 | |
| 42571835 | 351 | O-fucosyltransferase family protein [Ara | 0.994 | 0.988 | 0.786 | 1e-167 |
| >gi|317106736|dbj|BAJ53232.1| JHL06P13.13 [Jatropha curcas] | Back alignment and taxonomy information |
|---|
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/347 (86%), Positives = 324/347 (93%)
Query: 3 FCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEIS 62
FCDGVG+A LLNATLVLPKFE AAYWNESS FAD+F+ DYFIQ + GFVKVVK+LPPEI+
Sbjct: 98 FCDGVGIARLLNATLVLPKFEAAAYWNESSGFADVFDVDYFIQQVKGFVKVVKDLPPEIA 157
Query: 63 SKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSA 122
SKEPFHVDCSKRKGQFDY+ESVLP+LLEH YIS+TPAMSQRRDRYP +AKAALCQACYSA
Sbjct: 158 SKEPFHVDCSKRKGQFDYIESVLPSLLEHHYISITPAMSQRRDRYPSYAKAALCQACYSA 217
Query: 123 LRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRK 182
LRLTRSL+KKA+ELLEAIPKPFLSLHLRFEPDMVAYSQCEY GLSP SM+AIEAAR RK
Sbjct: 218 LRLTRSLEKKASELLEAIPKPFLSLHLRFEPDMVAYSQCEYLGLSPASMEAIEAARDYRK 277
Query: 183 PWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVV 242
PWTGE A IWR+RGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTS+YTNV
Sbjct: 278 PWTGESARIWRKRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSIYTNVF 337
Query: 243 TKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFL 302
K+ L + EDFT MHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRA+KGLYKTLFL
Sbjct: 338 NKATLLSSEDFTSMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAYKGLYKTLFL 397
Query: 303 SRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL 349
SR+AFAEFT+Q L+GKELMQALWK H +DF+MGRGSALPDCFCEF+L
Sbjct: 398 SRRAFAEFTFQSLKGKELMQALWKTHEEDFVMGRGSALPDCFCEFKL 444
|
Source: Jatropha curcas Species: Jatropha curcas Genus: Jatropha Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073734|ref|XP_002304147.1| predicted protein [Populus trichocarpa] gi|222841579|gb|EEE79126.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356519361|ref|XP_003528341.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449436132|ref|XP_004135848.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449530766|ref|XP_004172363.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255553137|ref|XP_002517611.1| conserved hypothetical protein [Ricinus communis] gi|223543243|gb|EEF44775.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|225443013|ref|XP_002267150.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297743429|emb|CBI36296.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356528958|ref|XP_003533064.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|5903043|gb|AAD55602.1|AC008016_12 Similar to gb|X80301 auxin-independent growth promoter (axi 1) from Nicotiana tabacum. EST gb|AA605466 comes from this gene [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|42571835|ref|NP_974008.1| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|332194711|gb|AEE32832.1| O-fucosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| TAIR|locus:2035084 | 439 | AT1G52630 [Arabidopsis thalian | 0.991 | 0.788 | 0.789 | 1.4e-151 | |
| TAIR|locus:2076552 | 512 | AT3G02250 [Arabidopsis thalian | 0.922 | 0.628 | 0.335 | 8.8e-47 | |
| TAIR|locus:2143181 | 508 | AT5G15740 [Arabidopsis thalian | 0.896 | 0.616 | 0.332 | 1.9e-44 | |
| TAIR|locus:2009467 | 565 | AT1G22460 [Arabidopsis thalian | 0.862 | 0.532 | 0.328 | 1.8e-42 | |
| TAIR|locus:2157096 | 652 | AT5G35570 [Arabidopsis thalian | 0.939 | 0.503 | 0.325 | 4.9e-41 | |
| TAIR|locus:2130938 | 549 | AT4G16650 [Arabidopsis thalian | 0.842 | 0.535 | 0.335 | 8.7e-40 | |
| TAIR|locus:2014869 | 499 | AT1G14020 [Arabidopsis thalian | 0.871 | 0.609 | 0.325 | 1.4e-39 | |
| TAIR|locus:2080285 | 638 | AT3G54100 [Arabidopsis thalian | 0.962 | 0.526 | 0.317 | 1.6e-39 | |
| TAIR|locus:2150129 | 631 | FRB1 "FRIABLE 1" [Arabidopsis | 0.865 | 0.478 | 0.342 | 2.5e-39 | |
| TAIR|locus:2065563 | 638 | AT2G37980 [Arabidopsis thalian | 0.865 | 0.473 | 0.330 | 3.6e-39 |
| TAIR|locus:2035084 AT1G52630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 273/346 (78%), Positives = 307/346 (88%)
Query: 4 CDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISS 63
CDGVG+A LLNATLVLPKFEVAAYWNESS FAD+F+ DYFIQ M G+++VVKELP +I+S
Sbjct: 94 CDGVGIARLLNATLVLPKFEVAAYWNESSGFADVFDVDYFIQKMSGYIEVVKELPKDIAS 153
Query: 64 KEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSAL 123
KEPF VDCSKRKGQFDY+ESVLP LLEH YIS TPAMSQRRDRYP +A+A LCQACYSA+
Sbjct: 154 KEPFKVDCSKRKGQFDYIESVLPLLLEHHYISFTPAMSQRRDRYPEYARATLCQACYSAI 213
Query: 124 RLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKP 183
LT SL+KKA EL +AIPKPFLSLHLRFEPDMVAYSQCEY LSP+S+ AIEAAR DRKP
Sbjct: 214 HLTSSLEKKAVELFDAIPKPFLSLHLRFEPDMVAYSQCEYPNLSPSSIAAIEAARADRKP 273
Query: 184 WTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVT 243
WTGE+A WR+RGKCPLTPNET L+LQ+L+IPT+TNIYLAAGDGLME+EG TSVYTNV T
Sbjct: 274 WTGELAQTWRKRGKCPLTPNETVLMLQSLNIPTSTNIYLAAGDGLMEMEGFTSVYTNVFT 333
Query: 244 KSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLS 303
KS L EDFTRMHGNTKAALDY+VSINSD+Y+ATYFGNMDK+VAAMR +K ++ TLFLS
Sbjct: 334 KSVLLNQEDFTRMHGNTKAALDYHVSINSDAYVATYFGNMDKIVAAMRTYKQMHNTLFLS 393
Query: 304 RKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL 349
RKAFAE T QGLEG EL +ALW+VH+ DF +GRG ALPDCFCEFEL
Sbjct: 394 RKAFAELTSQGLEGAELKKALWEVHKSDFAIGRGFALPDCFCEFEL 439
|
|
| TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2150129 FRB1 "FRIABLE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pg.C_LG_III0303 | hypothetical protein (437 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 349 | |||
| cd11299 | 290 | cd11299, O-FucT_plant, GDP-fucose protein O-fucosy | 1e-104 | |
| pfam10250 | 315 | pfam10250, O-FucT, GDP-fucose protein O-fucosyltra | 9e-79 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 9e-06 |
| >gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = e-104
Identities = 115/310 (37%), Positives = 162/310 (52%), Gaps = 45/310 (14%)
Query: 1 MQFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPE 60
Q CD V VA LLNATLVLP+ + + W +SS F DI++ D+FI+ + V+VVK+LP E
Sbjct: 15 SQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKSLKDDVRVVKKLPEE 74
Query: 61 ISSKEP--FHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRY-PRFAKAALCQ 117
++SK+P R Y+E VLP L +H I L P S+ + P + C+
Sbjct: 75 LASKKPEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLRCR 134
Query: 118 ACYSALRLTRSLQKKAAELLEAIPK---PFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAI 174
+ ALR +++ +L++ + + PFL+LHLRFE DM+A+S C
Sbjct: 135 VNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFSGC------------- 181
Query: 175 EAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGD---GLMEI 231
GKCPLTP E L+L+AL P +T IYLAAG+ G +
Sbjct: 182 ---------------------GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRL 220
Query: 232 EGLTSVYTNVVTKSALRTGED--FTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAA 289
+ L S++ N+ TK L T E+ H + AALDY V + SD ++ TY GN K VA
Sbjct: 221 DPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAG 280
Query: 290 MRAFKGLYKT 299
R + G KT
Sbjct: 281 HRRYLGHRKT 290
|
Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290 |
| >gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 100.0 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 93.44 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 91.68 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-50 Score=389.73 Aligned_cols=280 Identities=28% Similarity=0.421 Sum_probs=191.9
Q ss_pred CchhhHHHHHHHhcceEEccccCcccccCCCCC-----CCccccHHHHHHhccCceEEeccCCccccCCCCc--------
Q 018917 1 MQFCDGVGVAHLLNATLVLPKFEVAAYWNESSD-----FADIFEADYFIQHMDGFVKVVKELPPEISSKEPF-------- 67 (349)
Q Consensus 1 ~~IcdaV~vArlLNATLVlP~l~~~s~w~D~s~-----F~dIfD~dhFI~~L~~dVrIvk~LP~~~~~~~~~-------- 67 (349)
|++++||++|++||+|||||.+.....|++.++ |+++||+++|+++++++|.+.+.+|..+......
T Consensus 15 ~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~~~~~~~~~~ 94 (351)
T PF10250_consen 15 MGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFRLQYCWSPWE 94 (351)
T ss_dssp HHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-EEEESS-B-
T ss_pred HHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccchhhcccccc
Confidence 478999999999999999999999999999988 9999999999999999999999998655432110
Q ss_pred -----------------------eecccC-CCCccchHHhhHHHHHhc------ceEEEccCcccccc-CChhHHHHHhH
Q 018917 68 -----------------------HVDCSK-RKGQFDYVESVLPALLEH------KYISLTPAMSQRRD-RYPRFAKAALC 116 (349)
Q Consensus 68 -----------------------~~~~~~-~~s~~~Y~~~vlp~l~k~------~vi~l~~~~~~l~~-~~p~~~q~LRC 116 (349)
...... +.++.+|+++++|.+.++ +|+.|.++...+.+ ..+.++|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~r--- 171 (351)
T PF10250_consen 95 SGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYLDRDLQR--- 171 (351)
T ss_dssp -------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GGGGGGGG---
T ss_pred cccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhcccCccceE---
Confidence 001111 234556788899999886 99999999888764 47777876
Q ss_pred HhhccccccchHHHHHHHHHHHhcC---CCceeeecccchhhhhhcccccCCCChhHHHHHHHHhcCCCCCCcc--hhhh
Q 018917 117 QACYSALRLTRSLQKKAAELLEAIP---KPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGE--VAHI 191 (349)
Q Consensus 117 r~nf~ALrF~~~I~~lg~~lv~rl~---g~fiAlHLR~E~Dmla~sgC~~~g~~~~e~~~l~~~R~~~~~w~~~--~~~~ 191 (349)
+|+|+++|+++|+++++++. ++|||+|||+|+|| +++|.+ ++ +...|+.+|.. .++ .+..
T Consensus 172 -----~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~-~~---~~~~~~~~~~~----~~~~~~~~~ 236 (351)
T PF10250_consen 172 -----YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEF-KG---ERHLLASPRCW----GKKSINPEK 236 (351)
T ss_dssp -----G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT--T-------TTTHHHH-----GGGTT---
T ss_pred -----EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--Hhhccc-CC---chHHHHHhHhh----ccccccchh
Confidence 99999999999999999987 89999999999999 888997 44 45556666632 111 2346
Q ss_pred hhcCCCCCCCHHHHHHHHHHcCCCCCceEEEeecC---CcchhhHHHHhccccccccCCCChhhhccccCCccceeeEEE
Q 018917 192 WRRRGKCPLTPNETALILQALSIPTNTNIYLAAGD---GLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYV 268 (349)
Q Consensus 192 ~R~~G~CPLtPeEvgl~L~alGf~~~T~IYlA~g~---g~~~l~~L~~~fPn~~tKe~L~~~eEl~~~~~~~~aAlDy~V 268 (349)
.+..|.||++|++++.+++++|+.+.|.||||+++ |...|++|++.||++++|+++.+.+|++++.+.++|+||++|
T Consensus 237 ~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vD~~i 316 (351)
T PF10250_consen 237 KRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLNDDQLAMVDQEI 316 (351)
T ss_dssp --HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S-----S--HHHHHHH
T ss_pred hhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccccchhHHHHHH
Confidence 68899999999999999999999999999999999 678899999999999999999999999999889999999999
Q ss_pred eecCceeeecCCCchHHHHHHHhhhcCCCe
Q 018917 269 SINSDSYMATYFGNMDKMVAAMRAFKGLYK 298 (349)
Q Consensus 269 ~~~SDvFv~t~~Gn~a~~v~GhR~~~G~~k 298 (349)
|++||+||+|..++|+.+|+++|.+.|+.+
T Consensus 317 ~~~s~~Figt~~Stfs~~i~~~R~~~g~~~ 346 (351)
T PF10250_consen 317 CSRSDVFIGTCGSTFSSNIARERHYRGKPK 346 (351)
T ss_dssp HHHSSEEEE-TT-HHHHHHHHHHHHSSSS-
T ss_pred HhcCCEEEecCcchhHHHhhcccCcCCCCC
Confidence 999999999998889999999999999763
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 349 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 1e-09
Identities = 68/376 (18%), Positives = 110/376 (29%), Gaps = 121/376 (32%)
Query: 22 FEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPF-HV----------- 69
FE + + D +FE F+ + D K V+++P I SKE H+
Sbjct: 9 FETGEHQYQYKDILSVFEDA-FVDNFD--CKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65
Query: 70 ---DCSKRKG-----QF-------DY--------VESVLPALLEHKYISLTPAMSQRRDR 106
K +F +Y E P+++ YI +RDR
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE-------QRDR 118
Query: 107 Y----PRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCE 162
FAK Y+ RL L+ + A LLE P + + ++
Sbjct: 119 LYNDNQVFAK-------YNVSRLQPYLKLRQA-LLELRPAKNVLID-----GVL------ 159
Query: 163 YQGLSPTSMQAIEAARGDRKPWTGEVAHI-WRRRGKCPLTPNETALILQALSIPTNTNIY 221
G T + A++ K I W C +P +LQ L + N +
Sbjct: 160 --GSGKTWV-ALDVCL-SYKVQCKMDFKIFWLNLKNC-NSPETVLEMLQKLLYQIDPN-W 213
Query: 222 LAAGDGLMEIEGLTSVYTNVVTKSALRTGEDF--TRMHGNTKAALDYYVSINSDSYMATY 279
+ D I+ ++ LR ++ + N L +
Sbjct: 214 TSRSDHSSNIK-----LRIHSIQAELR---RLLKSKPYENCLLVLL-------NVQ---- 254
Query: 280 FGNMDKMVAAMRAFKGLYKTLFLSRKA--------------FAEFTYQGLEGKELMQALW 325
+ AF K L +R + L E+ L
Sbjct: 255 ----NAKAW--NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 326 KVHRDDFLMGRGSALP 341
K +L R LP
Sbjct: 309 K-----YLDCRPQDLP 319
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.36 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 99.14 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 96.24 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 90.91 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-12 Score=128.64 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=110.1
Q ss_pred cccccchHHHHHHHHHHHh-cCCCceeeecccchhhhhhcccccCCCChhHHHHHHHHhcCCCCCCcchhhhhhcCCCCC
Q 018917 121 SALRLTRSLQKKAAELLEA-IPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHIWRRRGKCP 199 (349)
Q Consensus 121 ~ALrF~~~I~~lg~~lv~r-l~g~fiAlHLR~E~Dmla~sgC~~~g~~~~e~~~l~~~R~~~~~w~~~~~~~~R~~G~CP 199 (349)
..|+|++.|.+.|++.++. |.++|+++|+|...|+... |...+. +.- .-....||+..+-. .-....+|
T Consensus 217 r~l~~s~~l~~~a~~fi~~~L~~~~~~~h~r~~~dw~~~--~~~~~~--~~~-----~~y~~~H~Rr~d~~-~~~~~~~p 286 (408)
T 4ap5_A 217 RSMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKM--KVKLGS--ALG-----GPYLGVHLRRKDFI-WGHRQDVP 286 (408)
T ss_dssp HTCCBCHHHHHHHHHHHHHHHCCCTTTTTCCCCSSGGGC--CCCTTC--BCC-----EEEEEEEECCTTTT-TTTCSSSC
T ss_pred HHhhhhHHHHHHHHHHHHHHhCcccceeecccchhHhhh--hccccc--ccC-----CCccccccccccch-hhhhccCC
Confidence 4799999999999998765 6899999999999998764 431110 000 00001122221110 01122344
Q ss_pred CCHHHHHHHHHHcCCCCCceEEEeecCCcchhhHHHHhccccccccCCCChhhhccccCCccceeeEEEeecCceeeecC
Q 018917 200 LTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATY 279 (349)
Q Consensus 200 LtPeEvgl~L~alGf~~~T~IYlA~g~g~~~l~~L~~~fPn~~tKe~L~~~eEl~~~~~~~~aAlDy~V~~~SDvFv~t~ 279 (349)
-.++-+..+.+.+.=.+-+.||||+-+.+..+.-|++.+|.++.-.. ..+++..+.....|.||-+||.+||+||+|.
T Consensus 287 s~~~~~~~i~~~~~~~~~~~VyiATD~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~d~~~a~idq~Ic~~a~~FiGt~ 364 (408)
T 4ap5_A 287 SLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEP--TWEELELYKDGGVAIIDQWICAHARFFIGTS 364 (408)
T ss_dssp CHHHHHHHHHHHHHHHTCSCEEEEECCCHHHHHHHHHHCTTEECCCC--CHHHHHHHHHHHHHHHHHHHHHTEEEEEBCT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHhCCCcEEecC--cchhhhccCcchhhHHHHHHHHhCCeeEeCC
Confidence 44433333333333224458999987666667889999998654322 2344555555667899999999999999999
Q ss_pred CCchHHHHHHHhhhcCCCe
Q 018917 280 FGNMDKMVAAMRAFKGLYK 298 (349)
Q Consensus 280 ~Gn~a~~v~GhR~~~G~~k 298 (349)
.++|+..|.-.|.+.|+..
T Consensus 365 ~StfS~~I~~eR~~~G~~~ 383 (408)
T 4ap5_A 365 VSTFSFRIHEEREILGLDP 383 (408)
T ss_dssp TCHHHHHHHHHHHHHTBCG
T ss_pred cCchhHHHHHHHHhcCCCC
Confidence 9999999999999999764
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00