Citrus Sinensis ID: 018944

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Secondary Structure (PSIPRED)
ccccEEEEccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHcccccccccccHHHcccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHccccccccccccccccccccEEHccHcccccccccHHHHHccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHccEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mavlnyipvtatsapisqdssstsssvpttrptkillpkkksmkwstgvapgeyggpptttklrkfwggekedpltsdefiwnndfmpRMKRLIEdtdessaekfpvqeepsgflslnrvmslDSLEVDLSKELTADSKTALQQPVEAAIQDSqqksgsvprkwrlaptrreqdkwdkatkaatggsdvmfrelrkprgdpevlAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKglmkgavgqprlLVPVVLVMIYNrwneitvpeygfLHLELIPMLVGFFTYKIATFFQAVEEAVSIvekkdpdiv
Flexible Loop (DISEMBL)
mavlnyipvtatsapisqdssstsssvpttrptkillpkkksmkwstgvapgeyggppttTKLRKFWGGekedpltsdefiwnndFMPRMKRLIEDTDESsaekfpvqeepsgflslnRVMSLDSLEVDLSKELTADSKTALQQPVEAaiqdsqqksgsvprkwrlaptrreqdkwdkatkaatggsdvmfrelRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLmkgavgqprLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAvsivekkdpdiv
Low Complexity Region (SEG)
MAVLNYIPVTAtsapisqdssstsssvpttrptKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIaasfaagllgslVYIRMLGSTVDSmaagakglmkgavgQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Disordered region (IsUnstruct)
***************************************************************RKFWG*******TSDEFIWNNDFM****************************************************************************************************************************YFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIV********
Disordered Region (DISOPRED)
*AVLNYIPVTA******************************************YGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRM***************************NRVMSLDSLEVD*************************************************************************************ASLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTV*******************LLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAV***********
Disordered Region (DISEMBL)
MAVLNYIPVTATSA*****************PTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIED**************PSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVE***************KWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Disordered Region (DISPRO)
MAVLNYIPVTATS*****************RPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIED*********************NRVMSLDSLEVDLSKELTADSKT******EAAIQ*************R****RR*QDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAG********VGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSI*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	348	2.2.26 [Sep-21-2011]
P08443	118	ATP synthase protein I OS	yes	no	0.307	0.906	0.311	5e-07
Q05376	115	ATP synthase protein I OS	N/A	no	0.252	0.765	0.281	2e-05
P12403	122	ATP synthase protein I OS	yes	no	0.301	0.860	0.3	2e-05

>sp|P08443|ATPZ_SYNP6 ATP synthase protein I OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpI PE=3 SV=1

 Score = 55.8 bits (133), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 15/122 (12%)

Query: 216 SLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKG 275
           +L+ +L  +TL    V   + + +YS   AAS+  G +G L+Y+RMLG  V+ +     G
Sbjct: 6   ALQRQLLQVTLICTVVIFGAVWWAYSLNTAASYLLGAMGGLLYLRMLGKAVERI-----G 60

Query: 276 LMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEE 335
             +   G+ RL + VVL+++  RW           +LEL+P+ +GF TYK A  +  +  
Sbjct: 61  ERRRQFGKSRLALFVVLIVLAARWQ----------YLELMPVFLGFLTYKAALIWYTLRA 110

Query: 336 AV 337
            +
Sbjct: 111 VI 112

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084)

>sp|Q05376|ATPZ_SYNP1 ATP synthase protein I OS=Synechococcus sp. (strain PCC 6716) GN=atpI PE=3 SV=2

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 15/103 (14%)

Query: 225 TLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQP 284
           +L +  +   + ++ Y    A ++  G   SL+Y+R+L   V+ +    K L     G+ 
Sbjct: 15  SLVLMAIAFGTVWVIYDLNTALNYLLGASASLIYLRLLARNVERLGHDQKKL-----GKT 69

Query: 285 RLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIA 327
           +LLV V ++++  RW+E          L +IP+ +GF TYK A
Sbjct: 70  QLLVVVAVIILAARWHE----------LHIIPVFLGFLTYKAA 102

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.

Synechococcus sp. (strain PCC 6716) (taxid: 32048)

>sp|P12403|ATPZ_NOSS1 ATP synthase protein I OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=atpI PE=3 SV=2

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 217 LKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGL 276
           L  +L  +TL + GV  +S +I YS  IA ++  G    +VY+RML   V+ +     G 
Sbjct: 7   LYQELVLITLVLTGVVFISVWIFYSLNIALNYLLGACTGVVYLRMLAKDVERL-----GR 61

Query: 277 MKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEA 336
            K ++ + RL + + L+++ +RWN+          L+++P+ +GF TYK       V  A
Sbjct: 62  EKQSLSKTRLALLMALILLASRWNQ----------LQIMPIFLGFLTYKATLIIYVVRVA 111

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	348
255575275	361	conserved hypothetical protein [Ricinus	0.968	0.933	0.738	1e-143
225446613	338	PREDICTED: uncharacterized protein LOC10	0.956	0.985	0.730	1e-141
147770695	338	hypothetical protein VITISV_018738 [Viti	0.956	0.985	0.728	1e-141
118489593	343	unknown [Populus trichocarpa x Populus d	0.968	0.982	0.706	1e-136
21593011	350	unknown [Arabidopsis thaliana]	0.962	0.957	0.684	1e-134
18402535	350	ATP synthase protein I [Arabidopsis thal	0.962	0.957	0.682	1e-134
297826533	350	hypothetical protein ARALYDRAFT_482029 [	0.974	0.968	0.672	1e-133
388496336	340	unknown [Lotus japonicus]	0.971	0.994	0.662	1e-127
449465218	338	PREDICTED: uncharacterized protein LOC10	0.956	0.985	0.671	1e-126
357474593	341	ATP synthase protein I [Medicago truncat	0.962	0.982	0.656	1e-124

>gi|255575275|ref|XP_002528541.1| conserved hypothetical protein [Ricinus communis] gi|223532043|gb|EEF33853.1| conserved hypothetical protein [Ricinus communis]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/344 (73%), Positives = 290/344 (84%), Gaps = 7/344 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTT-RPTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+LNYI VT+T+APISQDSS+         R TK++LPKKK +KWSTGVAPG+YGGPPT
Sbjct: 1   MAILNYISVTSTAAPISQDSSTPPPPQIPDPRQTKVILPKKKPLKWSTGVAPGDYGGPPT 60

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGE EDPLTSDEFIWN DFM RMKRL++D D  S E   VQEE SGFLSLNR
Sbjct: 61  TTKLRKYWGGEDEDPLTSDEFIWNKDFMSRMKRLVQDPDIPSLEPTSVQEESSGFLSLNR 120

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VMSLD+LEVDL+KEL    K   +   EAA + S     ++  KWRLAPTRREQ+KWDKA
Sbjct: 121 VMSLDNLEVDLTKELMRTPKLVPKVSAEAATKGSD----TIATKWRLAPTRREQEKWDKA 176

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYIS 239
           TKAATGGSDV+ RE+RKPRGDPE+LAAQS+EQYFK  LK+KLQ LTLG+GGVGLVSAYIS
Sbjct: 177 TKAATGGSDVLLREIRKPRGDPELLAAQSREQYFK--LKNKLQILTLGVGGVGLVSAYIS 234

Query: 240 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 299
           YSPEIAASF AGL+GSLVY+RMLGS++DSMA GAKGL+KGA+GQPRLLVPVVLVMIYNRW
Sbjct: 235 YSPEIAASFGAGLIGSLVYMRMLGSSIDSMADGAKGLIKGAIGQPRLLVPVVLVMIYNRW 294

Query: 300 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 343
           N I VP+YG +HLELIPMLVGFFTYKIATF QA+EEAV++  +K
Sbjct: 295 NGILVPDYGLMHLELIPMLVGFFTYKIATFVQAIEEAVTVAVEK 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446613|ref|XP_002280622.1| PREDICTED: uncharacterized protein LOC100243760 [Vitis vinifera] gi|302143424|emb|CBI21985.3| unnamed protein product [Vitis vinifera]

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 250/342 (73%), Positives = 291/342 (85%), Gaps = 9/342 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M VL+Y  V   + PISQDSS+ +S  P  R TK++LPKKK  KWSTGVAPG+YGGPPTT
Sbjct: 1   MVVLSYFSVNCATTPISQDSSTPTS--PNPRETKVILPKKKPQKWSTGVAPGDYGGPPTT 58

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           +KLRK+WGGE EDPLTSD+FIWN DFM RMK+LI+D D SS +  P +EE SGFLS++RV
Sbjct: 59  SKLRKYWGGE-EDPLTSDDFIWNKDFMGRMKKLIQDPDSSSLQPPPDKEESSGFLSISRV 117

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A S+T L+Q VEA      ++ G+  R+W+L PTRREQ+KWD+AT
Sbjct: 118 MSLDSLEVDLSKELSAPSRTVLEQQVEAP----PRRDGNTSRRWKLVPTRREQEKWDRAT 173

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISY 240
           KAATGGSDVMFRE+RKPRGDP+VLAA+S+EQYFK  LK KLQ  TLG+GGVGLVSAY+SY
Sbjct: 174 KAATGGSDVMFREIRKPRGDPKVLAAESREQYFK--LKKKLQIFTLGLGGVGLVSAYVSY 231

Query: 241 SPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWN 300
           SPEIAASF AG +GSLVYIRMLGS+VDSMA GAKGLMKGA+ QPRLLVPV LVMIYNRWN
Sbjct: 232 SPEIAASFGAGFIGSLVYIRMLGSSVDSMADGAKGLMKGAIAQPRLLVPVALVMIYNRWN 291

Query: 301 EITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 342
           EI VPE+GF+HLELIPMLVGFFTYK+ATF QA+EEA++IV K
Sbjct: 292 EIVVPEFGFMHLELIPMLVGFFTYKVATFVQAIEEALTIVGK 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147770695|emb|CAN77926.1| hypothetical protein VITISV_018738 [Vitis vinifera]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/342 (72%), Positives = 290/342 (84%), Gaps = 9/342 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M VL+Y  V   + PISQDSS+ +   P  R TK++LPKKK  KWSTGVAPG+YGGPPTT
Sbjct: 1   MVVLSYFSVNCATTPISQDSSTPTX--PNPRETKVILPKKKPQKWSTGVAPGDYGGPPTT 58

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           +KLRK+WGGE EDPLTSD+FIWN DFM RMK+LI+D D SS +  P +EE SGFLS++RV
Sbjct: 59  SKLRKYWGGE-EDPLTSDDFIWNKDFMGRMKKLIQDPDSSSLQPPPDKEESSGFLSISRV 117

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A S+T L+Q VEA      ++ G+  R+W+L PTRREQ+KWD+AT
Sbjct: 118 MSLDSLEVDLSKELSAPSRTVLEQQVEAP----PRRDGNTSRRWKLVPTRREQEKWDRAT 173

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISY 240
           KAATGGSDVMFRE+RKPRGDP+VLAA+S+EQYFK  LK KLQ  TLG+GGVGLVSAY+SY
Sbjct: 174 KAATGGSDVMFREIRKPRGDPKVLAAESREQYFK--LKKKLQIFTLGLGGVGLVSAYVSY 231

Query: 241 SPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWN 300
           SPEIAASF AG +GSLVYIRMLGS+VDSMA GAKGLMKGA+ QPRLLVPV LVMIYNRWN
Sbjct: 232 SPEIAASFGAGFIGSLVYIRMLGSSVDSMADGAKGLMKGAIAQPRLLVPVALVMIYNRWN 291

Query: 301 EITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 342
           EI VPE+GF+HLELIPMLVGFFTYK+ATF QA+EEA++IV K
Sbjct: 292 EIVVPEFGFMHLELIPMLVGFFTYKVATFVQAIEEALTIVGK 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489593|gb|ABK96598.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/344 (70%), Positives = 293/344 (85%), Gaps = 7/344 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M +++Y+   +T+ P+SQDSSS+SSS P+ R TK++LPKKK +KWSTG+APGEYGGPPTT
Sbjct: 5   MTIVSYVSANSTTTPLSQDSSSSSSSTPSPRQTKVILPKKKPLKWSTGIAPGEYGGPPTT 64

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIE-DTDESSAEKFPVQEEPSGFLSLNR 119
           TKLRK+WGGE EDPLTSD+FIWN DFMPRMKRL+  D  +   +  P +EE SGFLSLNR
Sbjct: 65  TKLRKYWGGEGEDPLTSDDFIWNKDFMPRMKRLLHNDPVDPFLQTSPAKEESSGFLSLNR 124

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VM+LDS+EVDLSKEL    K  ++QPVEA    ++ +SGS P KWR+APTRREQDKWDKA
Sbjct: 125 VMTLDSVEVDLSKELAQRPKPVIEQPVEAT---TKVRSGSSP-KWRMAPTRREQDKWDKA 180

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYIS 239
           TKA+T GSDVMFRELR+P+GDPEVLAAQS+EQYFK  LK+ LQ LTLGIG VGLVS Y+S
Sbjct: 181 TKASTSGSDVMFRELRRPQGDPEVLAAQSREQYFK--LKNNLQILTLGIGSVGLVSTYVS 238

Query: 240 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 299
           YSPEIAASF+AG +GSLVYIRMLG++VDS+A GAKG++KGA  QPRLLVPV+LVMIYNRW
Sbjct: 239 YSPEIAASFSAGFIGSLVYIRMLGNSVDSLADGAKGIVKGAAAQPRLLVPVLLVMIYNRW 298

Query: 300 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 343
           N I VP+YGF+HLELIPMLVGFF+YKIATF QA++EA++ + +K
Sbjct: 299 NGILVPDYGFMHLELIPMLVGFFSYKIATFVQAIDEALAPLVRK 342

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593011|gb|AAM64960.1| unknown [Arabidopsis thaliana]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/346 (68%), Positives = 285/346 (82%), Gaps = 11/346 (3%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +D ++SS +  P +EE SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDDPNDSSLDPSPSKEESSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL + SK+ ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAY 237
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFK  LK+K+Q LTLGIGGVGLVSAY
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFK--LKNKIQVLTLGIGGVGLVSAY 232

Query: 238 ISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYN 297
           ISY+PEIA SF AGLLGSL Y+RMLG++VD+MA GA+G+ KGA  QPRLLVPVVLVMI+N
Sbjct: 233 ISYTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGARGVAKGAANQPRLLVPVVLVMIFN 292

Query: 298 RWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 343
           RWN I VPEYGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K
Sbjct: 293 RWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18402535|ref|NP_565711.1| ATP synthase protein I [Arabidopsis thaliana] gi|3746067|gb|AAC63842.1| expressed protein [Arabidopsis thaliana] gi|15215861|gb|AAK91474.1| At2g31040/T16B12.15 [Arabidopsis thaliana] gi|19699268|gb|AAL91000.1| At2g31040/T16B12.15 [Arabidopsis thaliana] gi|20197222|gb|AAM14978.1| expressed protein [Arabidopsis thaliana] gi|330253388|gb|AEC08482.1| ATP synthase protein I [Arabidopsis thaliana]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/346 (68%), Positives = 285/346 (82%), Gaps = 11/346 (3%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +D ++SS +  P +E+ SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDDPNDSSLDPSPSKEKSSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL + SK+ ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAY 237
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFK  LK+K+Q LTLGIGGVGLVSAY
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFK--LKNKIQVLTLGIGGVGLVSAY 232

Query: 238 ISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYN 297
           ISY+PEIA SF AGLLGSL Y+RMLG++VD+MA GA+G+ KGA  QPRLLVPVVLVMI+N
Sbjct: 233 ISYTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGARGVAKGAANQPRLLVPVVLVMIFN 292

Query: 298 RWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 343
           RWN I VPEYGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K
Sbjct: 293 RWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826533|ref|XP_002881149.1| hypothetical protein ARALYDRAFT_482029 [Arabidopsis lyrata subsp. lyrata] gi|297326988|gb|EFH57408.1| hypothetical protein ARALYDRAFT_482029 [Arabidopsis lyrata subsp. lyrata]

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/354 (67%), Positives = 286/354 (80%), Gaps = 15/354 (4%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +  D+SS +  P +EE SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDSPDDSSLDPSPSKEESSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL   SK  ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELAVSSKPVVKDLLDTSKLEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAY 237
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFK  LK+K+Q LTLGIGGVGLVSAY
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFK--LKNKIQVLTLGIGGVGLVSAY 232

Query: 238 ISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYN 297
           ISY+PEIA SF AGL+GSL Y+RMLG++VD+MA GA+G++KGA  QPRLLVPVVLVMI+N
Sbjct: 233 ISYTPEIALSFGAGLMGSLAYMRMLGNSVDAMADGARGVVKGAANQPRLLVPVVLVMIFN 292

Query: 298 RWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK----DPDI 347
           RWN I VP+YGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K     PDI
Sbjct: 293 RWNAILVPDYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQKPESSSPDI 346

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496336|gb|AFK36234.1| unknown [Lotus japonicus]

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/344 (66%), Positives = 279/344 (81%), Gaps = 6/344 (1%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           MA+LNYI VT ++A  +   S   S +P  R +KILLP KK  KWSTG+APG+YGGPPTT
Sbjct: 1   MAILNYICVT-SAATPTSPESPIPSPIPDPRQSKILLPNKKPEKWSTGMAPGDYGGPPTT 59

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           TKLRK+WGG+  DPL +D F+WN DFM R ++LI++T   + +  P +EE SGFLS NRV
Sbjct: 60  TKLRKYWGGDNRDPLDTDGFMWNKDFMSRYQKLIQETQPGATQSPPAKEEASGFLSFNRV 119

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A +K  + Q +EAA + ++ +S  V  +W+L PTRREQ+KWD+AT
Sbjct: 120 MSLDSLEVDLSKELSAPAKNNIHQQIEAAPEMTESESKRV--RWKLVPTRREQEKWDRAT 177

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYISY 240
           KAATGG+DVMFRELR+PR +PEVLAAQ++EQY K  LK+K+Q LTLGIGGVGLVS+Y+SY
Sbjct: 178 KAATGGNDVMFRELRRPRENPEVLAAQAEEQYDK--LKNKMQILTLGIGGVGLVSSYVSY 235

Query: 241 SPEIAASFAAGLLGSLVYIRMLGSTVDSM-AAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 299
           SPEIAASF AGLLGSL YIRMLGS VD++   G KG +KGA+GQPRLLVPV+LVM+YNRW
Sbjct: 236 SPEIAASFGAGLLGSLAYIRMLGSNVDALRTNGGKGFVKGAIGQPRLLVPVILVMVYNRW 295

Query: 300 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 343
           N I VPE+G +HLELIPMLVGFFTYKI TFFQA+EEA++I  KK
Sbjct: 296 NAILVPEFGAMHLELIPMLVGFFTYKIGTFFQAIEEAITIAVKK 339

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465218|ref|XP_004150325.1| PREDICTED: uncharacterized protein LOC101216352 [Cucumis sativus]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/344 (67%), Positives = 281/344 (81%), Gaps = 11/344 (3%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           MAVLNYI  +A S+PISQDSS  S  +P  R TK++LPKKK  KWSTG+APG+YGGPPTT
Sbjct: 1   MAVLNYI--SAASSPISQDSS-ISPPIPDPRQTKVILPKKKPEKWSTGIAPGDYGGPPTT 57

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLI--EDTDESSAEKFPVQEEPSGFLSLN 118
           TKLRK+WGGEK+DPLTSD++IWN +FM RMK+ +  +  D S     P  ++PSGFLSLN
Sbjct: 58  TKLRKYWGGEKDDPLTSDDYIWNREFMARMKKFVKYQPDDLSLTVNKPKDDKPSGFLSLN 117

Query: 119 RVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDK 178
           RVM+LDSL+VDLSKEL+A      +  VE  I    +KS   PR W+LAPTRREQ+KWD+
Sbjct: 118 RVMTLDSLDVDLSKELSAPPMPRSEDLVEKNIPIDHRKS---PR-WKLAPTRREQEKWDR 173

Query: 179 ATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYI 238
           A +AATGGSDVMFRELR+P+G+PEVLAA S EQY K  LK K+Q LTL IGGVGL+SAY+
Sbjct: 174 AYEAATGGSDVMFRELRRPQGNPEVLAALSMEQYVK--LKKKMQILTLAIGGVGLISAYV 231

Query: 239 SYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNR 298
           SYSPE++ASF AGL+GSLVYIRMLG++VDS+A GAKGL+KGAV QPRLLVPV+LVMIYNR
Sbjct: 232 SYSPEVSASFGAGLIGSLVYIRMLGNSVDSLADGAKGLVKGAVAQPRLLVPVILVMIYNR 291

Query: 299 WNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 342
           WN I V +YG + L+LIPMLVGFFTYK+ATF QA+EEA+++V++
Sbjct: 292 WNGILVEDYGVVQLQLIPMLVGFFTYKVATFVQAIEEALTVVKE 335

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357474593|ref|XP_003607581.1| ATP synthase protein I [Medicago truncatula] gi|355508636|gb|AES89778.1| ATP synthase protein I [Medicago truncatula]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/349 (65%), Positives = 272/349 (77%), Gaps = 14/349 (4%)

Query: 1   MAVLNYI-PVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           M ++NY   VT  + PISQDSSS S   P  R TK++LP KK MKWSTG+APG+YGGPPT
Sbjct: 1   MGIINYYNCVTCAATPISQDSSS-SPLQPNPRQTKVILPNKKPMKWSTGMAPGDYGGPPT 59

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGE  DPL SD+++WN DF+P  +R+I   ++ S    P +E PSGFLSLNR
Sbjct: 60  TTKLRKYWGGEDPDPLASDDYLWNKDFVPHFERMIHPPEQPS----PSKEVPSGFLSLNR 115

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VMSLDS+EVDLSKEL+A     +QQ +E  I  ++  S  V  +WRLAPTRREQDKW++A
Sbjct: 116 VMSLDSMEVDLSKELSA---PVVQQQIETPIIATESDSKRV--RWRLAPTRREQDKWNRA 170

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKASLKSKLQFLTLGIGGVGLVSAYIS 239
            KAAT GSDVM RE RK R +PEVLAAQ +EQY K  LK +LQ LTLGIGGVGLVS Y+S
Sbjct: 171 AKAATDGSDVMLRESRKSRENPEVLAAQYREQYIK--LKKRLQALTLGIGGVGLVSTYVS 228

Query: 240 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMA-AGAKGLMKGAVGQPRLLVPVVLVMIYNR 298
           YSPEIAASF AG LGSL YIRMLGS++DS+   GA+  +KGA+GQPRLLVPVVLVMIYNR
Sbjct: 229 YSPEIAASFGAGFLGSLAYIRMLGSSMDSLNPNGARAAIKGAIGQPRLLVPVVLVMIYNR 288

Query: 299 WNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDI 347
           WN I VPEYG +HLELIPMLVGFFTYK+ATF QA+EE +++  KKD +I
Sbjct: 289 WNAILVPEYGIMHLELIPMLVGFFTYKMATFAQAIEEVITVASKKDLNI 337

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	348
TAIR|locus:2052836	350	AT2G31040 [Arabidopsis thalian	0.896	0.891	0.642	2.7e-107

TAIR|locus:2052836 AT2G31040 [Arabidopsis thaliana (taxid:3702)]

 Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
 Identities = 203/316 (64%), Positives = 245/316 (77%)

Query:    34 KILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRL 93
             KI+LP KK  KWSTGVAPGEYGGPPTTTKLRK+WGGEKEDP+TS + IWN DFM +MK+L
Sbjct:    29 KIILPNKKPEKWSTGVAPGEYGGPPTTTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKL 88

Query:    94 IEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS 153
              +D ++SS +  P +E+ SGFLS +RVMSLDS++VDLSKEL + SK+ ++  ++ +  ++
Sbjct:    89 FDDPNDSSLDPSPSKEKSSGFLSFSRVMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEA 148

Query:   154 --QQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQ 211
               Q     V  KW+LAPTRREQ+KWD+ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQ
Sbjct:   149 KKQMSKAIVSPKWKLAPTRREQEKWDRATKAATGGSDVMFRELRRPRGDPEVQAAKDREQ 208

Query:   212 YFKASLKSKLQFLTLGIGGVGLVSAYISYSPEIXXXXXXXXXXXXVYIRMLGSTVDSXXX 271
             YFK  LK+K+Q LTLGIGGVGLVSAYISY+PEI             Y+RMLG++VD+   
Sbjct:   209 YFK--LKNKIQVLTLGIGGVGLVSAYISYTPEIALSFGAGLLGSLAYMRMLGNSVDAMAD 266

Query:   272 XXXXXXXXXXXQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQ 331
                        QPRLLVPVVLVMI+NRWN I VPEYGF+HLELIPMLVGFFTYKIATFFQ
Sbjct:   267 GARGVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQ 326

Query:   332 AVEEAVSIVEKKDPDI 347
             A+EEA+SI  +K   I
Sbjct:   327 AIEEAISITTQKPESI 342


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      348       300   0.00095  115 3  11 22  0.43    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  202 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.08u 0.16s 26.24t   Elapsed:  00:00:02
  Total cpu time:  26.08u 0.16s 26.24t   Elapsed:  00:00:02
  Start:  Fri May 10 12:17:49 2013   End:  Fri May 10 12:17:51 2013

GO:0005886 "plasma membrane" evidence=ISM

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	348
pfam03899	99	pfam03899, ATP_synt_I, ATP synthase I chain	8e-07

>gnl|CDD|217784 pfam03899, ATP_synt_I, ATP synthase I chain

 Score = 46.4 bits (111), Expect = 8e-07
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 16/109 (14%)

Query: 220 KLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTV----DSMAAGAKG 275
           +L  + L +  V  +   ++    +A S   G L SL+   +          ++A  AK 
Sbjct: 1   RLLLIQLILLAVLALGWGLTGGLTVALSALLGGLISLLNFALFARRAFRFGGAIARKAKK 60

Query: 276 LMKG-AVGQP-RLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFF 322
            ++   +G+  RL + + L ++           + +  L L+ + +G  
Sbjct: 61  AVRSFYLGEAIRLALTIALFVLA----------FKYPKLSLLALFLGLL 99

Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	348
PF03899	100	ATP_synt_I: ATP synthase I chain; InterPro: IPR005	98.15
PRK05760	124	F0F1 ATP synthase subunit I; Validated	94.24
PF12966	85	AtpR: N-ATPase, AtpR subunit	94.2
PRK06099	126	F0F1 ATP synthase subunit I; Validated	90.86
PRK08049	124	F0F1 ATP synthase subunit I; Validated	86.61
COG3312	128	AtpI F0F1-type ATP synthase, subunit I [Energy pro	80.43

>PF03899 ATP_synt_I: ATP synthase I chain; InterPro: IPR005598 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=98.15  E-value=1e-05  Score=63.68  Aligned_cols=93  Identities=20%  Similarity=0.242  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHHhHhhhhcCHHHHHHHHHHHHHHHHHHHHHHhhHhhhcccc----ccccC--CCCCCCchHHHHHHHH
Q 018944          221 LQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGA----KGLMK--GAVGQPRLLVPVVLVM  294 (348)
Q Consensus       221 Lll~Tl~ig~vg~~~~~l~yS~~~AlSyllGa~gGllYLrLL~rsVD~Lg~~~----~g~~k--galgqpRLLVPV~Lvv  294 (348)
                      +...++.+++++.+.+++.++.+.++|+++|++.+++...++.+.++++.+..    ++..+  ..-.--|+++-+++++
T Consensus         2 i~~~~~~l~~~~~~~~~~~~~~~~~~s~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~R~~l~~~~~~   81 (100)
T PF03899_consen    2 IVIIQLILLAVLALVFFLFFGWPVALSFLLGGLISLLNFFLLARRVFRLAGALAMDPGRAVRAMYLGYFIRLALTILLFI   81 (100)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            56778888999999999999999999999999999999999999996664211    11111  0012357888888888


Q ss_pred             HHHHhhccccCCccCcchhHHHHHHHHH
Q 018944          295 IYNRWNEITVPEYGFLHLELIPMLVGFF  322 (348)
Q Consensus       295 ~a~rwn~i~~p~fg~~~LeLlP~llGFL  322 (348)
                      +..++..         +++.++.++||+
T Consensus        82 ~~~~~~~---------~~~~~~~~~Gl~  100 (100)
T PF03899_consen   82 LAFKFPP---------ELNPIALLIGLL  100 (100)
T ss_pred             HHHHHHc---------ccHHHHHHHHHC
Confidence            8888833         489999999985

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) (3.6.3.14 from EC) are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis []. These ATPases can also work in reverse to hydrolyse ATP to create a proton gradient. The atp operon of most prokaryotes contains the structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein of unknown function. A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex []. A role in magnesium uptake has also been suggested []. More information about this protein can be found at Protein of the Month: ATP synthases [].

>PRK05760 F0F1 ATP synthase subunit I; Validated

Probab=94.24  E-value=0.37  Score=41.68  Aligned_cols=103  Identities=14%  Similarity=0.114  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHhHhhhhcCHHHHHHHHHHHHHHHH----HHHHHHhhHhhhccc--cccccCCCCCCCchHHHHHHHH
Q 018944          221 LQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLV----YIRMLGSTVDSMAAG--AKGLMKGAVGQPRLLVPVVLVM  294 (348)
Q Consensus       221 Lll~Tl~ig~vg~~~~~l~yS~~~AlSyllGa~gGll----YLrLL~rsVD~Lg~~--~~g~~kgalgqpRLLVPV~Lvv  294 (348)
                      ++..=++++.++++.+++..+.+.|.|+++|++.+++    |.+.+-|+...=..+  ...-..|...+  +++-+++.+
T Consensus        10 ~l~~Q~~~~l~~a~~~~~~~~~~~a~Sal~Ggl~~~lP~~~Fa~~~fr~~g~~~~~~i~~~fy~GE~~K--~~lTi~lf~   87 (124)
T PRK05760         10 LLLIQLVVVLVAALVLWVAVGPVWGYSALIGGLIAVLANAYFAHCAFRFSGARAAKAIVRSFYAGEAGK--IIITAVLFA   87 (124)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence            4444555666666666777899999999999988765    555554443111000  00001111122  455555555


Q ss_pred             HHHHhhccccCCccCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 018944          295 IYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAV  337 (348)
Q Consensus       295 ~a~rwn~i~~p~fg~~~LeLlP~llGFLTYK~AlLvqa~rdv~  337 (348)
                      ++-+|-.         +++..+.|.||+   .++.++-+-+..
T Consensus        88 l~f~~~~---------~l~~~~lf~gf~---l~l~~~w~aP~~  118 (124)
T PRK05760         88 LAFAGVQ---------PLLPPLKFGTYL---LVLGVNWFAPLL  118 (124)
T ss_pred             HHHHHhc---------hhhHHHHHHHHH---HHHHHHHHHHHH
Confidence            4445422         355555555665   567666665543

>PF12966 AtpR: N-ATPase, AtpR subunit

Probab=94.20  E-value=0.14  Score=41.81  Aligned_cols=78  Identities=21%  Similarity=0.221  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHhhhccccccccCCCCCC--CchHHHHHHHHHHHHhhccccCCccCcchhHHHHHHH
Q 018944          243 EIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQ--PRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVG  320 (348)
Q Consensus       243 ~~AlSyllGa~gGllYLrLL~rsVD~Lg~~~~g~~kgalgq--pRLLVPV~Lvv~a~rwn~i~~p~fg~~~LeLlP~llG  320 (348)
                      +.+..+++|.+.|.+|..-|-.+|.++..+.... .--.++  .|+.+.++...+.++.+          -..++..++|
T Consensus         2 ~~~~~~~~G~~lG~~yF~gLw~tvr~~~~~~~p~-~~~~~S~l~R~~l~~~~f~~~~~~~----------~~~lL~~l~G   70 (85)
T PF12966_consen    2 QLLLAFLAGLLLGALYFGGLWWTVRRLLASKRPA-LWFLLSFLLRLALVLAGFYLLAQGG----------WWRLLACLLG   70 (85)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcH-HHHHHHHHHHHHHHHHHHHHHHhCC----------HHHHHHHHHH
Confidence            3578899999999999999999999996331110 001122  45555555555554432          2579999999


Q ss_pred             HHHHHHHHHHH
Q 018944          321 FFTYKIATFFQ  331 (348)
Q Consensus       321 FLTYK~AlLvq  331 (348)
                      |++.+..++..
T Consensus        71 F~~aR~i~~r~   81 (85)
T PF12966_consen   71 FLLARFIVLRR   81 (85)
T ss_pred             HHHHHHHHHHH
Confidence            99998877654

>PRK06099 F0F1 ATP synthase subunit I; Validated

Probab=90.86  E-value=0.92  Score=39.76  Aligned_cols=87  Identities=18%  Similarity=0.327  Sum_probs=46.9

Q ss_pred             hhhcCHHHHHHHHHHHHHHHH---HHHHHH-hhHhhhccccccccCCCCCCCchHHHHHHHHHHHHhhccccCCccCcch
Q 018944          237 YISYSPEIAASFAAGLLGSLV---YIRMLG-STVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHL  312 (348)
Q Consensus       237 ~l~yS~~~AlSyllGa~gGll---YLrLL~-rsVD~Lg~~~~g~~kgalgqpRLLVPV~Lvv~a~rwn~i~~p~fg~~~L  312 (348)
                      +...+.+.|+|+++|++.+++   |.-++. ++-.+-..-.+.-.+|-.++  +++-+++++++=.|=.         ++
T Consensus        30 ~~~~~~~~a~Sal~Ggli~~LPn~~Fa~~aF~~~~~~~~~~~sFy~GE~~K--~ilTivlf~laf~~~~---------~~   98 (126)
T PRK06099         30 LLIWQGQSAVSFLLGFLSAFLPFCLFVYWIFFRKQKNSSKLTAFYRGEAIK--FILTIVLIVIAFKLLP---------VL   98 (126)
T ss_pred             HHHhhHHHHHHHHHhhHHHHHhHHHHHHHHHHhccchHHHHHHHHHHhHHH--HHHHHHHHHHHHHHhh---------hh
Confidence            345799999999999998864   443443 22111100000001121222  4444444444434321         37


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh
Q 018944          313 ELIPMLVGFFTYKIATFFQAVEEAV  337 (348)
Q Consensus       313 eLlP~llGFLTYK~AlLvqa~rdv~  337 (348)
                      +.+|.++||+.   +++++-+-+..
T Consensus        99 ~~~~lf~~y~l---~l~~~~~aP~~  120 (126)
T PRK06099         99 HFIAFFVGFFI---ALVLNNLIPFI  120 (126)
T ss_pred             HHHHHHHHHHH---HHHHHHHHHHH
Confidence            89999888874   66666655543

>PRK08049 F0F1 ATP synthase subunit I; Validated

Probab=86.61  E-value=12  Score=32.97  Aligned_cols=102  Identities=18%  Similarity=0.170  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhhhcCHHHHHHHHHHHHHHHH---HHHHHH-hhHhhhccccccc-----cCCCCCCCchH
Q 018944          217 LKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLV---YIRMLG-STVDSMAAGAKGL-----MKGAVGQPRLL  287 (348)
Q Consensus       217 LK~~Lll~Tl~ig~vg~~~~~l~yS~~~AlSyllGa~gGll---YLrLL~-rsVD~Lg~~~~g~-----~kgalgqpRLL  287 (348)
                      |-+++++.=+++..+.++ +|...+.+.|.|.++|++..++   |.-+.. |+-..  ...++.     ..|-..  .++
T Consensus        10 la~klll~Q~~~~~~~s~-~~~~~~~~~~~Sal~Ggl~~~lPn~~Fa~~afr~~~~--~~a~~~v~~sFy~GE~l--K~~   84 (124)
T PRK08049         10 VARKLLLLQLLTFVASGA-LFSLKDPFWGVSALAGGLAAWLPNVLFMIFAWRHQAH--TPAKGRVAWSFAFGEAL--KVL   84 (124)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHcCHHHHHHHHHhhHHHHHhHHHHHHHHHHhccc--cchHHHHHHHHHHHHHH--HHH
Confidence            334455554444444443 4566799999999999998864   222111 22100  001000     011111  255


Q ss_pred             HHHHHHHHHHHhhccccCCccCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 018944          288 VPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEA  336 (348)
Q Consensus       288 VPV~Lvv~a~rwn~i~~p~fg~~~LeLlP~llGFLTYK~AlLvqa~rdv  336 (348)
                      +-+++++++-+|=.          .+.+|.++||+.   ++.+|-+-+.
T Consensus        85 lTi~lf~~af~~~~----------~~~~plf~ty~l---~L~~~~~aP~  120 (124)
T PRK08049         85 ATIALLVVALGVFK----------AVFLPLGLTWLS---VLVVQILAPA  120 (124)
T ss_pred             HHHHHHHHHHHHHh----------HHHHHHHHHHHH---HHHHHHHHHH
Confidence            56666666666532          357888888874   6666665544

>COG3312 AtpI F0F1-type ATP synthase, subunit I [Energy production and conversion]

Probab=80.43  E-value=20  Score=32.05  Aligned_cols=107  Identities=19%  Similarity=0.278  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhhhcCHHHHHHHHHHHHHHHH----HHHHHHhhHhhh-ccccc-cccCCCCCCCchHHHH
Q 018944          217 LKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLV----YIRMLGSTVDSM-AAGAK-GLMKGAVGQPRLLVPV  290 (348)
Q Consensus       217 LK~~Lll~Tl~ig~vg~~~~~l~yS~~~AlSyllGa~gGll----YLrLL~rsVD~L-g~~~~-g~~kgalgqpRLLVPV  290 (348)
                      .+|+|++.-++...+.. .++..++++.++|++.|+.+-++    +....-+.-.+- ..+.- .-..|-.. +=++-.+
T Consensus        11 ~ar~lLliql~~~ivaa-~~f~v~~~~~~vSal~Ggla~~LP~~~F~~~af~f~~~~f~~~~~~sFy~GEal-KvilTiv   88 (128)
T COG3312          11 VARKLLLIQLLVVIVAA-LLFAVWQPQWGVSALLGGLAAFLPNCLFVLFAFRFRGQTFAKGRVASFYFGEAL-KVILTLV   88 (128)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHhHHH-HHHHHHH
Confidence            55667777666555444 34555679999999999887643    222222211110 00000 00000001 1133344


Q ss_pred             HHHHHHHHhhccccCCccCcchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018944          291 VLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVS  338 (348)
Q Consensus       291 ~Lvv~a~rwn~i~~p~fg~~~LeLlP~llGFLTYK~AlLvqa~rdv~~  338 (348)
                      .+++++.-|+.          ..++|.++|+|.   ++.++-.-+...
T Consensus        89 l~~vAf~~~~~----------~~fipl~vgyLl---~lvln~laPl~i  123 (128)
T COG3312          89 LLVVAFAVLKA----------VLFIPLFVGYLL---VLVLNILAPLVI  123 (128)
T ss_pred             HHHHHHHHHHH----------HHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            55555666665          448899988875   555555555443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00