Citrus Sinensis ID: 019217

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----
Protein Sequence
MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Secondary Structure (PSIPRED)
ccccEEEEccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHccccccccccccHHHcccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHccccccccccccccccccccEEHccEcccccccccHHHHHccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccEEEHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHccccEEEHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mavlnyipvtatsapisqdssstsssvpttrptkillpkkksmkwstgvapgeyggpptttklrkfwggekedpltsdefiwnndfmpRMKRLIEdtdessaekfpvqeepsgflslnrvmslDSLEVDLSKELTADSKTALQQPVEAAIQDSqqksgsvprkwrlaptrreqdkwdkatkaatggsdvmfrelrkprgdpevlAAQSKEQYFKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKglmkgavgqprlLVPVVLVMIYNrwneitvpeygfLHLELIPMLVGFFTYKIATFFQAVEEAVSIvekkdpdiv
Flexible Loop (DISEMBL)
mavlnyipvtatsapisqdssstsssvpttrptkillpkkksmkwstgvapgeyggppttTKLRKFWGGekedpltsdefiwnndFMPRMKRLIEDTDESsaekfpvqeepsgflslnRVMSLDSLEVDLSKELTADSKTALQQPVEAaiqdsqqksgsvprkwrlaptrreqdkwdkatkaatggsdvmfrelRKPRGDPEVLAAQSKEQYFKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLmkgavgqprLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAvsivekkdpdiv
Low Complexity Region (SEG)
MAVLNYIPVTAtsapisqdssstsssvpttrptKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKSKLQFLTLGIGGVGLVSAYISYSPEIaasfaagllgslVYIRMLGSTVDSmaagakglmkgavgQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Disordered region (IsUnstruct)
***************************************************************RKFWG*******TSDEFIWNNDFM***************************************************************************************************************************QYFKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIV********
Disordered Region (DISOPRED)
*AVLNYIPVTA******************************************YGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRM***************************NRVMSLDSLEVDL**********************************************************************************FKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTV*******************LLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVS**********
Disordered Region (DISEMBL)
MAVLNYIPVTATSA*****************PTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIED**************PSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVE***************KWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Disordered Region (DISPRO)
MAVLNYIPVTATS*****************RPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIED******************LS*NRVMSLDSLEVDLSKELTADS************Q***********************KWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAG********VGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSI*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	344	2.2.26 [Sep-21-2011]
P08443	118	ATP synthase protein I OS	yes	no	0.255	0.745	0.320	5e-07
Q05376	115	ATP synthase protein I OS	N/A	no	0.287	0.860	0.277	3e-05
P12403	122	ATP synthase protein I OS	yes	no	0.296	0.836	0.299	4e-05

>sp|P08443|ATPZ_SYNP6 ATP synthase protein I OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpI PE=3 SV=1

 Score = 55.8 bits (133), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 15/103 (14%)

Query: 231 SAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVM 290
           + + +YS   AAS+  G +G L+Y+RMLG  V+ +     G  +   G+ RL + VVL++
Sbjct: 25  AVWWAYSLNTAASYLLGAMGGLLYLRMLGKAVERI-----GERRRQFGKSRLALFVVLIV 79

Query: 291 IYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAV 333
           +  RW           +LEL+P+ +GF TYK A  +  +   +
Sbjct: 80  LAARWQ----------YLELMPVFLGFLTYKAALIWYTLRAVI 112

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084)

>sp|Q05376|ATPZ_SYNP1 ATP synthase protein I OS=Synechococcus sp. (strain PCC 6716) GN=atpI PE=3 SV=2

 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 20/119 (16%)

Query: 207 QSKEQYFKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMA 266
           Q   + F + L  + +  G V     ++ Y    A ++  G   SL+Y+R+L   V+ + 
Sbjct: 6   QLCRELFTTSLVLMAIAFGTV-----WVIYDLNTALNYLLGASASLIYLRLLARNVERLG 60

Query: 267 AGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATF 325
              K L     G+ +LLV V ++++  RW+E          L +IP+ +GF TYK A  
Sbjct: 61  HDQKKL-----GKTQLLVVVAVIILAARWHE----------LHIIPVFLGFLTYKAAIL 104

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.

Synechococcus sp. (strain PCC 6716) (taxid: 32048)

>sp|P12403|ATPZ_NOSS1 ATP synthase protein I OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=atpI PE=3 SV=2

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 15/117 (12%)

Query: 216 KLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKG 275
           +L  +TL + GV  +S +I YS  IA ++  G    +VY+RML   V+ +     G  K 
Sbjct: 10  ELVLITLVLTGVVFISVWIFYSLNIALNYLLGACTGVVYLRMLAKDVERL-----GREKQ 64

Query: 276 AVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEA 332
           ++ + RL + + L+++ +RWN+          L+++P+ +GF TYK       V  A
Sbjct: 65  SLSKTRLALLMALILLASRWNQ----------LQIMPIFLGFLTYKATLIIYVVRVA 111

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	344
255575275	361	conserved hypothetical protein [Ricinus	0.973	0.927	0.736	1e-142
225446613	338	PREDICTED: uncharacterized protein LOC10	0.962	0.979	0.729	1e-140
147770695	338	hypothetical protein VITISV_018738 [Viti	0.962	0.979	0.726	1e-140
118489593	343	unknown [Populus trichocarpa x Populus d	0.973	0.976	0.707	1e-135
21593011	350	unknown [Arabidopsis thaliana]	0.968	0.951	0.683	1e-133
18402535	350	ATP synthase protein I [Arabidopsis thal	0.968	0.951	0.680	1e-133
297826533	350	hypothetical protein ARALYDRAFT_482029 [	0.979	0.962	0.670	1e-131
388496336	340	unknown [Lotus japonicus]	0.976	0.988	0.660	1e-126
449465218	338	PREDICTED: uncharacterized protein LOC10	0.962	0.979	0.669	1e-125
357474593	341	ATP synthase protein I [Medicago truncat	0.968	0.976	0.654	1e-123

>gi|255575275|ref|XP_002528541.1| conserved hypothetical protein [Ricinus communis] gi|223532043|gb|EEF33853.1| conserved hypothetical protein [Ricinus communis]

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 252/342 (73%), Positives = 288/342 (84%), Gaps = 7/342 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTT-RPTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+LNYI VT+T+APISQDSS+         R TK++LPKKK +KWSTGVAPG+YGGPPT
Sbjct: 1   MAILNYISVTSTAAPISQDSSTPPPPQIPDPRQTKVILPKKKPLKWSTGVAPGDYGGPPT 60

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGE EDPLTSDEFIWN DFM RMKRL++D D  S E   VQEE SGFLSLNR
Sbjct: 61  TTKLRKYWGGEDEDPLTSDEFIWNKDFMSRMKRLVQDPDIPSLEPTSVQEESSGFLSLNR 120

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VMSLD+LEVDL+KEL    K   +   EAA + S     ++  KWRLAPTRREQ+KWDKA
Sbjct: 121 VMSLDNLEVDLTKELMRTPKLVPKVSAEAATKGSD----TIATKWRLAPTRREQEKWDKA 176

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFK--SKLQFLTLGIGGVGLVSAYISYS 237
           TKAATGGSDV+ RE+RKPRGDPE+LAAQS+EQYFK  +KLQ LTLG+GGVGLVSAYISYS
Sbjct: 177 TKAATGGSDVLLREIRKPRGDPELLAAQSREQYFKLKNKLQILTLGVGGVGLVSAYISYS 236

Query: 238 PEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNE 297
           PEIAASF AGL+GSLVY+RMLGS++DSMA GAKGL+KGA+GQPRLLVPVVLVMIYNRWN 
Sbjct: 237 PEIAASFGAGLIGSLVYMRMLGSSIDSMADGAKGLIKGAIGQPRLLVPVVLVMIYNRWNG 296

Query: 298 ITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 339
           I VP+YG +HLELIPMLVGFFTYKIATF QA+EEAV++  +K
Sbjct: 297 ILVPDYGLMHLELIPMLVGFFTYKIATFVQAIEEAVTVAVEK 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446613|ref|XP_002280622.1| PREDICTED: uncharacterized protein LOC100243760 [Vitis vinifera] gi|302143424|emb|CBI21985.3| unnamed protein product [Vitis vinifera]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/340 (72%), Positives = 289/340 (85%), Gaps = 9/340 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M VL+Y  V   + PISQDSS+ +S  P  R TK++LPKKK  KWSTGVAPG+YGGPPTT
Sbjct: 1   MVVLSYFSVNCATTPISQDSSTPTS--PNPRETKVILPKKKPQKWSTGVAPGDYGGPPTT 58

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           +KLRK+WGGE EDPLTSD+FIWN DFM RMK+LI+D D SS +  P +EE SGFLS++RV
Sbjct: 59  SKLRKYWGGE-EDPLTSDDFIWNKDFMGRMKKLIQDPDSSSLQPPPDKEESSGFLSISRV 117

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A S+T L+Q VEA      ++ G+  R+W+L PTRREQ+KWD+AT
Sbjct: 118 MSLDSLEVDLSKELSAPSRTVLEQQVEAP----PRRDGNTSRRWKLVPTRREQEKWDRAT 173

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFK--SKLQFLTLGIGGVGLVSAYISYSP 238
           KAATGGSDVMFRE+RKPRGDP+VLAA+S+EQYFK   KLQ  TLG+GGVGLVSAY+SYSP
Sbjct: 174 KAATGGSDVMFREIRKPRGDPKVLAAESREQYFKLKKKLQIFTLGLGGVGLVSAYVSYSP 233

Query: 239 EIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEI 298
           EIAASF AG +GSLVYIRMLGS+VDSMA GAKGLMKGA+ QPRLLVPV LVMIYNRWNEI
Sbjct: 234 EIAASFGAGFIGSLVYIRMLGSSVDSMADGAKGLMKGAIAQPRLLVPVALVMIYNRWNEI 293

Query: 299 TVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 338
            VPE+GF+HLELIPMLVGFFTYK+ATF QA+EEA++IV K
Sbjct: 294 VVPEFGFMHLELIPMLVGFFTYKVATFVQAIEEALTIVGK 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147770695|emb|CAN77926.1| hypothetical protein VITISV_018738 [Vitis vinifera]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 247/340 (72%), Positives = 288/340 (84%), Gaps = 9/340 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M VL+Y  V   + PISQDSS+ +   P  R TK++LPKKK  KWSTGVAPG+YGGPPTT
Sbjct: 1   MVVLSYFSVNCATTPISQDSSTPTX--PNPRETKVILPKKKPQKWSTGVAPGDYGGPPTT 58

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           +KLRK+WGGE EDPLTSD+FIWN DFM RMK+LI+D D SS +  P +EE SGFLS++RV
Sbjct: 59  SKLRKYWGGE-EDPLTSDDFIWNKDFMGRMKKLIQDPDSSSLQPPPDKEESSGFLSISRV 117

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A S+T L+Q VEA      ++ G+  R+W+L PTRREQ+KWD+AT
Sbjct: 118 MSLDSLEVDLSKELSAPSRTVLEQQVEAP----PRRDGNTSRRWKLVPTRREQEKWDRAT 173

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFK--SKLQFLTLGIGGVGLVSAYISYSP 238
           KAATGGSDVMFRE+RKPRGDP+VLAA+S+EQYFK   KLQ  TLG+GGVGLVSAY+SYSP
Sbjct: 174 KAATGGSDVMFREIRKPRGDPKVLAAESREQYFKLKKKLQIFTLGLGGVGLVSAYVSYSP 233

Query: 239 EIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEI 298
           EIAASF AG +GSLVYIRMLGS+VDSMA GAKGLMKGA+ QPRLLVPV LVMIYNRWNEI
Sbjct: 234 EIAASFGAGFIGSLVYIRMLGSSVDSMADGAKGLMKGAIAQPRLLVPVALVMIYNRWNEI 293

Query: 299 TVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 338
            VPE+GF+HLELIPMLVGFFTYK+ATF QA+EEA++IV K
Sbjct: 294 VVPEFGFMHLELIPMLVGFFTYKVATFVQAIEEALTIVGK 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489593|gb|ABK96598.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 242/342 (70%), Positives = 291/342 (85%), Gaps = 7/342 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M +++Y+   +T+ P+SQDSSS+SSS P+ R TK++LPKKK +KWSTG+APGEYGGPPTT
Sbjct: 5   MTIVSYVSANSTTTPLSQDSSSSSSSTPSPRQTKVILPKKKPLKWSTGIAPGEYGGPPTT 64

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIE-DTDESSAEKFPVQEEPSGFLSLNR 119
           TKLRK+WGGE EDPLTSD+FIWN DFMPRMKRL+  D  +   +  P +EE SGFLSLNR
Sbjct: 65  TKLRKYWGGEGEDPLTSDDFIWNKDFMPRMKRLLHNDPVDPFLQTSPAKEESSGFLSLNR 124

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VM+LDS+EVDLSKEL    K  ++QPVEA    ++ +SGS P KWR+APTRREQDKWDKA
Sbjct: 125 VMTLDSVEVDLSKELAQRPKPVIEQPVEAT---TKVRSGSSP-KWRMAPTRREQDKWDKA 180

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKSK--LQFLTLGIGGVGLVSAYISYS 237
           TKA+T GSDVMFRELR+P+GDPEVLAAQS+EQYFK K  LQ LTLGIG VGLVS Y+SYS
Sbjct: 181 TKASTSGSDVMFRELRRPQGDPEVLAAQSREQYFKLKNNLQILTLGIGSVGLVSTYVSYS 240

Query: 238 PEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNE 297
           PEIAASF+AG +GSLVYIRMLG++VDS+A GAKG++KGA  QPRLLVPV+LVMIYNRWN 
Sbjct: 241 PEIAASFSAGFIGSLVYIRMLGNSVDSLADGAKGIVKGAAAQPRLLVPVLLVMIYNRWNG 300

Query: 298 ITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 339
           I VP+YGF+HLELIPMLVGFF+YKIATF QA++EA++ + +K
Sbjct: 301 ILVPDYGFMHLELIPMLVGFFSYKIATFVQAIDEALAPLVRK 342

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593011|gb|AAM64960.1| unknown [Arabidopsis thaliana]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/344 (68%), Positives = 283/344 (82%), Gaps = 11/344 (3%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +D ++SS +  P +EE SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDDPNDSSLDPSPSKEESSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL + SK+ ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFK--SKLQFLTLGIGGVGLVSAYIS 235
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFK  +K+Q LTLGIGGVGLVSAYIS
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFKLKNKIQVLTLGIGGVGLVSAYIS 234

Query: 236 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 295
           Y+PEIA SF AGLLGSL Y+RMLG++VD+MA GA+G+ KGA  QPRLLVPVVLVMI+NRW
Sbjct: 235 YTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGARGVAKGAANQPRLLVPVVLVMIFNRW 294

Query: 296 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 339
           N I VPEYGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K
Sbjct: 295 NAILVPEYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18402535|ref|NP_565711.1| ATP synthase protein I [Arabidopsis thaliana] gi|3746067|gb|AAC63842.1| expressed protein [Arabidopsis thaliana] gi|15215861|gb|AAK91474.1| At2g31040/T16B12.15 [Arabidopsis thaliana] gi|19699268|gb|AAL91000.1| At2g31040/T16B12.15 [Arabidopsis thaliana] gi|20197222|gb|AAM14978.1| expressed protein [Arabidopsis thaliana] gi|330253388|gb|AEC08482.1| ATP synthase protein I [Arabidopsis thaliana]

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/344 (68%), Positives = 283/344 (82%), Gaps = 11/344 (3%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +D ++SS +  P +E+ SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDDPNDSSLDPSPSKEKSSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL + SK+ ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFK--SKLQFLTLGIGGVGLVSAYIS 235
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFK  +K+Q LTLGIGGVGLVSAYIS
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFKLKNKIQVLTLGIGGVGLVSAYIS 234

Query: 236 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 295
           Y+PEIA SF AGLLGSL Y+RMLG++VD+MA GA+G+ KGA  QPRLLVPVVLVMI+NRW
Sbjct: 235 YTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGARGVAKGAANQPRLLVPVVLVMIFNRW 294

Query: 296 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 339
           N I VPEYGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K
Sbjct: 295 NAILVPEYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826533|ref|XP_002881149.1| hypothetical protein ARALYDRAFT_482029 [Arabidopsis lyrata subsp. lyrata] gi|297326988|gb|EFH57408.1| hypothetical protein ARALYDRAFT_482029 [Arabidopsis lyrata subsp. lyrata]

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/352 (67%), Positives = 284/352 (80%), Gaps = 15/352 (4%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +  D+SS +  P +EE SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDSPDDSSLDPSPSKEESSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL   SK  ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELAVSSKPVVKDLLDTSKLEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFK--SKLQFLTLGIGGVGLVSAYIS 235
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFK  +K+Q LTLGIGGVGLVSAYIS
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFKLKNKIQVLTLGIGGVGLVSAYIS 234

Query: 236 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 295
           Y+PEIA SF AGL+GSL Y+RMLG++VD+MA GA+G++KGA  QPRLLVPVVLVMI+NRW
Sbjct: 235 YTPEIALSFGAGLMGSLAYMRMLGNSVDAMADGARGVVKGAANQPRLLVPVVLVMIFNRW 294

Query: 296 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK----DPDI 343
           N I VP+YGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K     PDI
Sbjct: 295 NAILVPDYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQKPESSSPDI 346

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496336|gb|AFK36234.1| unknown [Lotus japonicus]

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/342 (66%), Positives = 277/342 (80%), Gaps = 6/342 (1%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           MA+LNYI VT ++A  +   S   S +P  R +KILLP KK  KWSTG+APG+YGGPPTT
Sbjct: 1   MAILNYICVT-SAATPTSPESPIPSPIPDPRQSKILLPNKKPEKWSTGMAPGDYGGPPTT 59

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           TKLRK+WGG+  DPL +D F+WN DFM R ++LI++T   + +  P +EE SGFLS NRV
Sbjct: 60  TKLRKYWGGDNRDPLDTDGFMWNKDFMSRYQKLIQETQPGATQSPPAKEEASGFLSFNRV 119

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A +K  + Q +EAA + ++ +S  V  +W+L PTRREQ+KWD+AT
Sbjct: 120 MSLDSLEVDLSKELSAPAKNNIHQQIEAAPEMTESESKRV--RWKLVPTRREQEKWDRAT 177

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQY--FKSKLQFLTLGIGGVGLVSAYISYSP 238
           KAATGG+DVMFRELR+PR +PEVLAAQ++EQY   K+K+Q LTLGIGGVGLVS+Y+SYSP
Sbjct: 178 KAATGGNDVMFRELRRPRENPEVLAAQAEEQYDKLKNKMQILTLGIGGVGLVSSYVSYSP 237

Query: 239 EIAASFAAGLLGSLVYIRMLGSTVDSM-AAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNE 297
           EIAASF AGLLGSL YIRMLGS VD++   G KG +KGA+GQPRLLVPV+LVM+YNRWN 
Sbjct: 238 EIAASFGAGLLGSLAYIRMLGSNVDALRTNGGKGFVKGAIGQPRLLVPVILVMVYNRWNA 297

Query: 298 ITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 339
           I VPE+G +HLELIPMLVGFFTYKI TFFQA+EEA++I  KK
Sbjct: 298 ILVPEFGAMHLELIPMLVGFFTYKIGTFFQAIEEAITIAVKK 339

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465218|ref|XP_004150325.1| PREDICTED: uncharacterized protein LOC101216352 [Cucumis sativus]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/342 (66%), Positives = 279/342 (81%), Gaps = 11/342 (3%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           MAVLNYI  +A S+PISQDSS  S  +P  R TK++LPKKK  KWSTG+APG+YGGPPTT
Sbjct: 1   MAVLNYI--SAASSPISQDSS-ISPPIPDPRQTKVILPKKKPEKWSTGIAPGDYGGPPTT 57

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLI--EDTDESSAEKFPVQEEPSGFLSLN 118
           TKLRK+WGGEK+DPLTSD++IWN +FM RMK+ +  +  D S     P  ++PSGFLSLN
Sbjct: 58  TKLRKYWGGEKDDPLTSDDYIWNREFMARMKKFVKYQPDDLSLTVNKPKDDKPSGFLSLN 117

Query: 119 RVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDK 178
           RVM+LDSL+VDLSKEL+A      +  VE  I    +KS   PR W+LAPTRREQ+KWD+
Sbjct: 118 RVMTLDSLDVDLSKELSAPPMPRSEDLVEKNIPIDHRKS---PR-WKLAPTRREQEKWDR 173

Query: 179 ATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQY--FKSKLQFLTLGIGGVGLVSAYISY 236
           A +AATGGSDVMFRELR+P+G+PEVLAA S EQY   K K+Q LTL IGGVGL+SAY+SY
Sbjct: 174 AYEAATGGSDVMFRELRRPQGNPEVLAALSMEQYVKLKKKMQILTLAIGGVGLISAYVSY 233

Query: 237 SPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWN 296
           SPE++ASF AGL+GSLVYIRMLG++VDS+A GAKGL+KGAV QPRLLVPV+LVMIYNRWN
Sbjct: 234 SPEVSASFGAGLIGSLVYIRMLGNSVDSLADGAKGLVKGAVAQPRLLVPVILVMIYNRWN 293

Query: 297 EITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 338
            I V +YG + L+LIPMLVGFFTYK+ATF QA+EEA+++V++
Sbjct: 294 GILVEDYGVVQLQLIPMLVGFFTYKVATFVQAIEEALTVVKE 335

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357474593|ref|XP_003607581.1| ATP synthase protein I [Medicago truncatula] gi|355508636|gb|AES89778.1| ATP synthase protein I [Medicago truncatula]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/347 (65%), Positives = 270/347 (77%), Gaps = 14/347 (4%)

Query: 1   MAVLNYI-PVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           M ++NY   VT  + PISQDSSS S   P  R TK++LP KK MKWSTG+APG+YGGPPT
Sbjct: 1   MGIINYYNCVTCAATPISQDSSS-SPLQPNPRQTKVILPNKKPMKWSTGMAPGDYGGPPT 59

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGE  DPL SD+++WN DF+P  +R+I   ++ S    P +E PSGFLSLNR
Sbjct: 60  TTKLRKYWGGEDPDPLASDDYLWNKDFVPHFERMIHPPEQPS----PSKEVPSGFLSLNR 115

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VMSLDS+EVDLSKEL+A     +QQ +E  I  ++  S  V  +WRLAPTRREQDKW++A
Sbjct: 116 VMSLDSMEVDLSKELSA---PVVQQQIETPIIATESDSKRV--RWRLAPTRREQDKWNRA 170

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQY--FKSKLQFLTLGIGGVGLVSAYISYS 237
            KAAT GSDVM RE RK R +PEVLAAQ +EQY   K +LQ LTLGIGGVGLVS Y+SYS
Sbjct: 171 AKAATDGSDVMLRESRKSRENPEVLAAQYREQYIKLKKRLQALTLGIGGVGLVSTYVSYS 230

Query: 238 PEIAASFAAGLLGSLVYIRMLGSTVDSMA-AGAKGLMKGAVGQPRLLVPVVLVMIYNRWN 296
           PEIAASF AG LGSL YIRMLGS++DS+   GA+  +KGA+GQPRLLVPVVLVMIYNRWN
Sbjct: 231 PEIAASFGAGFLGSLAYIRMLGSSMDSLNPNGARAAIKGAIGQPRLLVPVVLVMIYNRWN 290

Query: 297 EITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDI 343
            I VPEYG +HLELIPMLVGFFTYK+ATF QA+EE +++  KKD +I
Sbjct: 291 AILVPEYGIMHLELIPMLVGFFTYKMATFAQAIEEVITVASKKDLNI 337

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	344
TAIR|locus:2052836	350	AT2G31040 [Arabidopsis thalian	0.901	0.885	0.640	2.5e-106

TAIR|locus:2052836 AT2G31040 [Arabidopsis thaliana (taxid:3702)]

 Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
 Identities = 201/314 (64%), Positives = 243/314 (77%)

Query:    34 KILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRL 93
             KI+LP KK  KWSTGVAPGEYGGPPTTTKLRK+WGGEKEDP+TS + IWN DFM +MK+L
Sbjct:    29 KIILPNKKPEKWSTGVAPGEYGGPPTTTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKL 88

Query:    94 IEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS 153
              +D ++SS +  P +E+ SGFLS +RVMSLDS++VDLSKEL + SK+ ++  ++ +  ++
Sbjct:    89 FDDPNDSSLDPSPSKEKSSGFLSFSRVMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEA 148

Query:   154 --QQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQ 211
               Q     V  KW+LAPTRREQ+KWD+ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQ
Sbjct:   149 KKQMSKAIVSPKWKLAPTRREQEKWDRATKAATGGSDVMFRELRRPRGDPEVQAAKDREQ 208

Query:   212 YFK--SKLQFLTLGIGGVGLVSAYISYSPEIXXXXXXXXXXXXVYIRMLGSTVDSXXXXX 269
             YFK  +K+Q LTLGIGGVGLVSAYISY+PEI             Y+RMLG++VD+     
Sbjct:   209 YFKLKNKIQVLTLGIGGVGLVSAYISYTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGA 268

Query:   270 XXXXXXXXXQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAV 329
                      QPRLLVPVVLVMI+NRWN I VPEYGF+HLELIPMLVGFFTYKIATFFQA+
Sbjct:   269 RGVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQAI 328

Query:   330 EEAVSIVEKKDPDI 343
             EEA+SI  +K   I
Sbjct:   329 EEAISITTQKPESI 342


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      344       296   0.00093  115 3  11 22  0.42    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  202 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.78u 0.08s 25.86t   Elapsed:  00:00:02
  Total cpu time:  25.78u 0.08s 25.86t   Elapsed:  00:00:02
  Start:  Sat May 11 03:59:36 2013   End:  Sat May 11 03:59:38 2013

GO:0005886 "plasma membrane" evidence=ISM

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	344
pfam03899	99	pfam03899, ATP_synt_I, ATP synthase I chain	7e-07

>gnl|CDD|217784 pfam03899, ATP_synt_I, ATP synthase I chain

 Score = 46.4 bits (111), Expect = 7e-07
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 16/109 (14%)

Query: 216 KLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTV----DSMAAGAKG 271
           +L  + L +  V  +   ++    +A S   G L SL+   +          ++A  AK 
Sbjct: 1   RLLLIQLILLAVLALGWGLTGGLTVALSALLGGLISLLNFALFARRAFRFGGAIARKAKK 60

Query: 272 LMKG-AVGQP-RLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFF 318
            ++   +G+  RL + + L ++           + +  L L+ + +G  
Sbjct: 61  AVRSFYLGEAIRLALTIALFVLA----------FKYPKLSLLALFLGLL 99

Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	344
PF03899	100	ATP_synt_I: ATP synthase I chain; InterPro: IPR005	98.21
PF12966	85	AtpR: N-ATPase, AtpR subunit	94.44
PRK05760	124	F0F1 ATP synthase subunit I; Validated	92.61
PRK06099	126	F0F1 ATP synthase subunit I; Validated	89.43
PRK08049	124	F0F1 ATP synthase subunit I; Validated	82.15

>PF03899 ATP_synt_I: ATP synthase I chain; InterPro: IPR005598 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=98.21  E-value=5.4e-06  Score=65.22  Aligned_cols=94  Identities=20%  Similarity=0.252  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHHHHHHHHhhHhhhccccc----cccC--CCCCCCchHHHHHHH
Q 019217          216 KLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAK----GLMK--GAVGQPRLLVPVVLV  289 (344)
Q Consensus       216 ~Lll~Tl~ig~vg~~~~~l~yS~~~AlSyllGA~gGllYLrLLarsVD~Lg~~~~----g~~k--galgqpRLLVPV~Lv  289 (344)
                      ++...++.+++++.+.++++++.+.++|+++|++.+++...++.+.++++.+...    +..+  ....--|+++-++++
T Consensus         1 ri~~~~~~l~~~~~~~~~~~~~~~~~~s~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~R~~l~~~~~   80 (100)
T PF03899_consen    1 RIVIIQLILLAVLALVFFLFFGWPVALSFLLGGLISLLNFFLLARRVFRLAGALAMDPGRAVRAMYLGYFIRLALTILLF   80 (100)
T ss_pred             ChHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence            3567888999999999999999999999999999999999999999966643211    1111  011236788888888


Q ss_pred             HHHHHhhccccCCccccchhHHHHHHHHH
Q 019217          290 MIYNRWNEITVPEYGFLHLELIPMLVGFF  318 (344)
Q Consensus       290 v~a~rwn~i~~p~f~~~~LeLlP~llGFL  318 (344)
                      ++..++..         +++.++.++||+
T Consensus        81 ~~~~~~~~---------~~~~~~~~~Gl~  100 (100)
T PF03899_consen   81 ILAFKFPP---------ELNPIALLIGLL  100 (100)
T ss_pred             HHHHHHHc---------ccHHHHHHHHHC
Confidence            88888833         489999999985

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) (3.6.3.14 from EC) are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis []. These ATPases can also work in reverse to hydrolyse ATP to create a proton gradient. The atp operon of most prokaryotes contains the structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein of unknown function. A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex []. A role in magnesium uptake has also been suggested []. More information about this protein can be found at Protein of the Month: ATP synthases [].

>PF12966 AtpR: N-ATPase, AtpR subunit

Probab=94.44  E-value=0.11  Score=42.30  Aligned_cols=78  Identities=21%  Similarity=0.208  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHhhhccccccccCCCCCC--CchHHHHHHHHHHHHhhccccCCccccchhHHHHHHH
Q 019217          239 EIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQ--PRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVG  316 (344)
Q Consensus       239 ~~AlSyllGA~gGllYLrLLarsVD~Lg~~~~g~~kgalgq--pRLLVPV~Lvv~a~rwn~i~~p~f~~~~LeLlP~llG  316 (344)
                      +.+..+++|.+.|.+|..-|-.+|.++..+... ..--.++  .|+.+.++...+.++.+.          ..++..++|
T Consensus         2 ~~~~~~~~G~~lG~~yF~gLw~tvr~~~~~~~p-~~~~~~S~l~R~~l~~~~f~~~~~~~~----------~~lL~~l~G   70 (85)
T PF12966_consen    2 QLLLAFLAGLLLGALYFGGLWWTVRRLLASKRP-ALWFLLSFLLRLALVLAGFYLLAQGGW----------WRLLACLLG   70 (85)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-HHHHHHHHHHHHHHHHHHHHHHHhCCH----------HHHHHHHHH
Confidence            357889999999999999999999999543111 0001122  455555555555544332          678999999


Q ss_pred             HHHHHHHHHHH
Q 019217          317 FFTYKIATFFQ  327 (344)
Q Consensus       317 FLTYK~AlLvq  327 (344)
                      |++.+..++..
T Consensus        71 F~~aR~i~~r~   81 (85)
T PF12966_consen   71 FLLARFIVLRR   81 (85)
T ss_pred             HHHHHHHHHHH
Confidence            99988877644

>PRK05760 F0F1 ATP synthase subunit I; Validated

Probab=92.61  E-value=1.7  Score=37.50  Aligned_cols=104  Identities=13%  Similarity=0.122  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHH----HHHHHHhhHhhhc-cc-cccccCCCCCCCchHHHHHHH
Q 019217          216 KLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLV----YIRMLGSTVDSMA-AG-AKGLMKGAVGQPRLLVPVVLV  289 (344)
Q Consensus       216 ~Lll~Tl~ig~vg~~~~~l~yS~~~AlSyllGA~gGll----YLrLLarsVD~Lg-~~-~~g~~kgalgqpRLLVPV~Lv  289 (344)
                      +++..=++++.++++.+++..+.+.|.|+++|++.+++    |.+.+-|+...=. .. ...-.+|-..  .+++-++++
T Consensus         9 k~l~~Q~~~~l~~a~~~~~~~~~~~a~Sal~Ggl~~~lP~~~Fa~~~fr~~g~~~~~~i~~~fy~GE~~--K~~lTi~lf   86 (124)
T PRK05760          9 RLLLIQLVVVLVAALVLWVAVGPVWGYSALIGGLIAVLANAYFAHCAFRFSGARAAKAIVRSFYAGEAG--KIIITAVLF   86 (124)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH--HHHHHHHHH
Confidence            34555556666666667777899999999999988765    4444444321100 00 0000011111  234445554


Q ss_pred             HHHHHhhccccCCccccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 019217          290 MIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAV  333 (344)
Q Consensus       290 v~a~rwn~i~~p~f~~~~LeLlP~llGFLTYK~AlLvqa~rdv~  333 (344)
                      +++-+|-+         +++..+.|.||+   .++.++-+-+..
T Consensus        87 ~l~f~~~~---------~l~~~~lf~gf~---l~l~~~w~aP~~  118 (124)
T PRK05760         87 ALAFAGVQ---------PLLPPLKFGTYL---LVLGVNWFAPLL  118 (124)
T ss_pred             HHHHHHhc---------hhhHHHHHHHHH---HHHHHHHHHHHH
Confidence            44444422         355555555665   567766665543

>PRK06099 F0F1 ATP synthase subunit I; Validated

Probab=89.43  E-value=1  Score=39.41  Aligned_cols=87  Identities=18%  Similarity=0.319  Sum_probs=46.2

Q ss_pred             hhccCHHHHHHHHHHHHHHHH---HHHHHH-hhHhhhccccccccCCCCCCCchHHHHHHHHHHHHhhccccCCccccch
Q 019217          233 YISYSPEIAASFAAGLLGSLV---YIRMLG-STVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHL  308 (344)
Q Consensus       233 ~l~yS~~~AlSyllGA~gGll---YLrLLa-rsVD~Lg~~~~g~~kgalgqpRLLVPV~Lvv~a~rwn~i~~p~f~~~~L  308 (344)
                      +...|.+.|+|+++|++.+++   |.-+++ ++-.+-..-.+.-.+|-.+ + +++-+++++++=.|=.         ++
T Consensus        30 ~~~~~~~~a~Sal~Ggli~~LPn~~Fa~~aF~~~~~~~~~~~sFy~GE~~-K-~ilTivlf~laf~~~~---------~~   98 (126)
T PRK06099         30 LLIWQGQSAVSFLLGFLSAFLPFCLFVYWIFFRKQKNSSKLTAFYRGEAI-K-FILTIVLIVIAFKLLP---------VL   98 (126)
T ss_pred             HHHhhHHHHHHHHHhhHHHHHhHHHHHHHHHHhccchHHHHHHHHHHhHH-H-HHHHHHHHHHHHHHhh---------hh
Confidence            345699999999999999874   444444 2211110000000111111 2 3444444444433321         38


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh
Q 019217          309 ELIPMLVGFFTYKIATFFQAVEEAV  333 (344)
Q Consensus       309 eLlP~llGFLTYK~AlLvqa~rdv~  333 (344)
                      +.+|.++||+.   +++++-+-+..
T Consensus        99 ~~~~lf~~y~l---~l~~~~~aP~~  120 (126)
T PRK06099         99 HFIAFFVGFFI---ALVLNNLIPFI  120 (126)
T ss_pred             HHHHHHHHHHH---HHHHHHHHHHH
Confidence            99999888875   66666655543

>PRK08049 F0F1 ATP synthase subunit I; Validated

Probab=82.15  E-value=28  Score=30.55  Aligned_cols=84  Identities=17%  Similarity=0.216  Sum_probs=45.4

Q ss_pred             hhhccCHHHHHHHHHHHHHHHH---HHHHHH-hhHhhhccccccc-----cCCCCCCCchHHHHHHHHHHHHhhccccCC
Q 019217          232 AYISYSPEIAASFAAGLLGSLV---YIRMLG-STVDSMAAGAKGL-----MKGAVGQPRLLVPVVLVMIYNRWNEITVPE  302 (344)
Q Consensus       232 ~~l~yS~~~AlSyllGA~gGll---YLrLLa-rsVD~Lg~~~~g~-----~kgalgqpRLLVPV~Lvv~a~rwn~i~~p~  302 (344)
                      +|...+.+.|+|.++|++..++   |.-+.. |+-..  ...++.     ..|-.  -.+++-+++++++-.|=+     
T Consensus        28 ~~~~~~~~~~~Sal~Ggl~~~lPn~~Fa~~afr~~~~--~~a~~~v~~sFy~GE~--lK~~lTi~lf~~af~~~~-----   98 (124)
T PRK08049         28 LFSLKDPFWGVSALAGGLAAWLPNVLFMIFAWRHQAH--TPAKGRVAWSFAFGEA--LKVLATIALLVVALGVFK-----   98 (124)
T ss_pred             HHHHcCHHHHHHHHHhhHHHHHhHHHHHHHHHHhccc--cchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHh-----
Confidence            4556799999999999998864   222111 21100  000000     00101  124555666666666633     


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 019217          303 YGFLHLELIPMLVGFFTYKIATFFQAVEEA  332 (344)
Q Consensus       303 f~~~~LeLlP~llGFLTYK~AlLvqa~rdv  332 (344)
                           .+.+|.++||+.   ++.++-+-+.
T Consensus        99 -----~~~~plf~ty~l---~L~~~~~aP~  120 (124)
T PRK08049         99 -----AVFLPLGLTWLS---VLVVQILAPA  120 (124)
T ss_pred             -----HHHHHHHHHHHH---HHHHHHHHHH
Confidence                 457888888874   6666655443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00