Citrus Sinensis ID: 019635

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
ccccEEEcccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccHHHcccccccccccccccccEEEEEEcccccccHHccccccccccHHHHHHHHHHHHHHccccHHHHHHccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHHHcccccccccccccccEEEEEccccccEEEEc
ccHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHccccccccHHHHEEcccccEEEEEEcccEccccccccccEEEEEccEEEcccEccccccccHHHHHHHHHHHHHHHHcccccHHHHcccccHHHHHHHHEEHHccccHHHHHHHHHHHHccccccHHHHHHHHcccccHHcccHHHHcccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccEEEEEEcccccccEEEEEEEHHHHHHHHHHHHHHHHHHccccccccHHHcccEEEEEcccccEEEEEc
MKGETVVIITKFQLFNHINSLFfnlgsglssstafVCSSTVALMAAFGVEVPKAISIMAKSGFaelidfnpirttdvqlpaggTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFAckngssdpvFAVKEFlrkepytaldiEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHafkdtvssnlseeDKLKKLGdlmndshhscsvlyecscpelEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSridrgvinnndlGLYVFaskpssgaakfkf
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAasnynnrvVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFackngssdpVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHafkdtvssnlseEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLyvfaskpssgaakfkf
MKGETVVIITKFQLFNHInslffnlgsglsssTAFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
****TVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKIT*****************************AAHVYS*******************************SHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFA************
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKP*********
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query338 2.2.26 [Sep-21-2011]
Q9SEE5496 Galactokinase OS=Arabidop yes no 0.920 0.627 0.688 1e-126
Q5XIG6458 N-acetylgalactosamine kin yes no 0.849 0.626 0.398 8e-51
Q68FH4458 N-acetylgalactosamine kin yes no 0.828 0.611 0.385 1e-49
Q54DN6501 Galactokinase OS=Dictyost yes no 0.881 0.594 0.352 1e-49
Q01415458 N-acetylgalactosamine kin yes no 0.840 0.620 0.398 3e-48
Q5R6J8458 N-acetylgalactosamine kin yes no 0.840 0.620 0.395 2e-47
P04385528 Galactokinase OS=Saccharo yes no 0.881 0.564 0.324 8e-30
P09608503 Galactokinase OS=Kluyvero yes no 0.878 0.590 0.306 1e-27
O42821504 Galactokinase OS=Candida N/A no 0.940 0.630 0.311 4e-26
P13045520 Protein GAL3 OS=Saccharom no no 0.807 0.525 0.304 2e-24
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2 Back     alignment and function desciption
 Score =  452 bits (1163), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/334 (68%), Positives = 270/334 (80%), Gaps = 23/334 (6%)

Query: 26  GSGLSSSTAFVCSSTVALMAAFGVEVPK-----------------------AISIMAKSG 62
           GSGLSSS AFVCS+T+A+MA FG    K                       AISIMAK+G
Sbjct: 161 GSGLSSSAAFVCSATIAIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTG 220

Query: 63  FAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKL 122
           FAELIDFNP+R TDV+LP GG+FV+AHSLAES KA+TAA NYNNRVVECRL +I+L +KL
Sbjct: 221 FAELIDFNPVRATDVKLPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKL 280

Query: 123 GMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLT 182
           GM+P+EAISKVKTLSDVEGLCV+FA   GSSDP+ AVKE+L++EPYTA +IEKI EEKL 
Sbjct: 281 GMEPKEAISKVKTLSDVEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLP 340

Query: 183 SIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMN 242
           SI  N  +SL VLNAA  +KLHQRAAHVYSEA+RVH FKDTV+SNLS+E+KLKKLGDLMN
Sbjct: 341 SIVNNDPTSLAVLNAATHFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMN 400

Query: 243 DSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLK 302
           +SH+SCSVLYECSCPELEELV VC+ NGALGARLTGAGWGGC VALVKE   +QFI  +K
Sbjct: 401 ESHYSCSVLYECSCPELEELVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFIPAVK 460

Query: 303 EQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKF 336
           E++Y+ R+++GV+   D+ LY+FASKPSSGAA F
Sbjct: 461 EKYYKKRVEKGVVKKEDMELYLFASKPSSGAAIF 494
Sugar-1-kinase with a very high substrate specificity for the alpha-anomeric configuration of D-galacose (D-Gal). Converts also efficiently 2-deoxy-D-Gal to 2-deoxy-D-al-1-phosphate.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 6
>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2 SV=1 Back     alignment and function description
>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1 Back     alignment and function description
>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1 Back     alignment and function description
>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1 Back     alignment and function description
>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1 Back     alignment and function description
>sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL1 PE=1 SV=4 Back     alignment and function description
>sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL1 PE=2 SV=2 Back     alignment and function description
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1 Back     alignment and function description
>sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
356565073 497 PREDICTED: galactokinase-like [Glycine m 0.926 0.629 0.764 1e-144
356521747 497 PREDICTED: galactokinase-like [Glycine m 0.926 0.629 0.761 1e-143
255556438 499 galactokinase, putative [Ricinus communi 0.926 0.627 0.75 1e-143
224108774 496 predicted protein [Populus trichocarpa] 0.926 0.631 0.752 1e-142
224101523 496 predicted protein [Populus trichocarpa] 0.926 0.631 0.747 1e-140
225432012 499 PREDICTED: galactokinase [Vitis vinifera 0.926 0.627 0.752 1e-139
84468320 496 putative galactose kinase [Trifolium pra 0.926 0.631 0.741 1e-139
357479039 497 Galactokinase [Medicago truncatula] gi|3 0.926 0.629 0.735 1e-138
449466203426 PREDICTED: galactokinase-like [Cucumis s 0.926 0.734 0.726 1e-137
209978716 500 galactokinase [Cucumis melo] 0.926 0.626 0.723 1e-137
>gi|356565073|ref|XP_003550769.1| PREDICTED: galactokinase-like [Glycine max] Back     alignment and taxonomy information
 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/336 (76%), Positives = 280/336 (83%), Gaps = 23/336 (6%)

Query: 26  GSGLSSSTAFVCSSTVALMAAFGVEVPK-----------------------AISIMAKSG 62
           GSGLSSS AFVCSST+A+MAAF V  PK                       AIS+MAK+G
Sbjct: 162 GSGLSSSAAFVCSSTIAIMAAFDVNFPKKELAQVTCDCERHIGTQSGGMDQAISVMAKTG 221

Query: 63  FAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKL 122
           FAELIDFNPIR TDVQLPAGGTFV+AHSLAES KA+TAA+NYNNRVVEC L +IVLAIKL
Sbjct: 222 FAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECHLASIVLAIKL 281

Query: 123 GMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLT 182
           GM P+EAISKV TLSDVEGLCV+FA    SSDPV AVKE+L++EPYTA +IE +T EKLT
Sbjct: 282 GMDPKEAISKVSTLSDVEGLCVSFAGIYNSSDPVLAVKEYLKEEPYTAEEIEAVTGEKLT 341

Query: 183 SIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMN 242
           S   N+++ L+VL  AKQYKLHQRAAHVYSEAKRVHAFKD VSSNLS+ED LKKLGDLMN
Sbjct: 342 SFLNNNAAYLEVLKVAKQYKLHQRAAHVYSEAKRVHAFKDVVSSNLSDEDMLKKLGDLMN 401

Query: 243 DSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLK 302
           +SHHSCSVLYECSCPELEELVN+CRNNGALGARLTGAGWGGC VALVKESI  QFILNLK
Sbjct: 402 ESHHSCSVLYECSCPELEELVNICRNNGALGARLTGAGWGGCAVALVKESIVPQFILNLK 461

Query: 303 EQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF 338
           E FYQSRID+GVI  NDLGLYVFASKPSSGAA FKF
Sbjct: 462 ECFYQSRIDKGVIKKNDLGLYVFASKPSSGAAIFKF 497

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356521747|ref|XP_003529513.1| PREDICTED: galactokinase-like [Glycine max] Back     alignment and taxonomy information
>gi|255556438|ref|XP_002519253.1| galactokinase, putative [Ricinus communis] gi|223541568|gb|EEF43117.1| galactokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224108774|ref|XP_002314964.1| predicted protein [Populus trichocarpa] gi|222864004|gb|EEF01135.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224101523|ref|XP_002312315.1| predicted protein [Populus trichocarpa] gi|222852135|gb|EEE89682.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432012|ref|XP_002279647.1| PREDICTED: galactokinase [Vitis vinifera] gi|296083222|emb|CBI22858.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|84468320|dbj|BAE71243.1| putative galactose kinase [Trifolium pratense] Back     alignment and taxonomy information
>gi|357479039|ref|XP_003609805.1| Galactokinase [Medicago truncatula] gi|355510860|gb|AES92002.1| Galactokinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449466203|ref|XP_004150816.1| PREDICTED: galactokinase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|209978716|gb|ACJ04703.1| galactokinase [Cucumis melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
TAIR|locus:2084344496 GALK [Arabidopsis thaliana (ta 0.840 0.572 0.742 1.4e-116
RGD|1308691458 Galk2 "galactokinase 2" [Rattu 0.822 0.606 0.401 6e-48
UNIPROTKB|E1C902398 GALK2 "Uncharacterized protein 0.834 0.708 0.403 2e-47
UNIPROTKB|F1P1D1461 GALK2 "Uncharacterized protein 0.834 0.611 0.403 2e-47
UNIPROTKB|F1MFK7447 GALK2 "Uncharacterized protein 0.828 0.626 0.394 5.4e-47
MGI|MGI:1917226458 Galk2 "galactokinase 2" [Mus m 0.831 0.613 0.383 5.4e-47
UNIPROTKB|F1SQG6458 GALK2 "Uncharacterized protein 0.822 0.606 0.394 1.6e-45
UNIPROTKB|E2RDA6458 GALK2 "Uncharacterized protein 0.822 0.606 0.398 2.1e-45
ZFIN|ZDB-GENE-041114-143457 galk2 "galactokinase 2" [Danio 0.822 0.608 0.383 2.1e-45
UNIPROTKB|B7ZAX5434 GALK2 "cDNA, FLJ79339, highly 0.813 0.633 0.408 2.7e-45
TAIR|locus:2084344 GALK [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1106 (394.4 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
 Identities = 211/284 (74%), Positives = 249/284 (87%)

Query:    53 KAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECR 112
             +AISIMAK+GFAELIDFNP+R TDV+LP GG+FV+AHSLAES KA+TAA NYNNRVVECR
Sbjct:   211 QAISIMAKTGFAELIDFNPVRATDVKLPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECR 270

Query:   113 LTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALD 172
             L +I+L +KLGM+P+EAISKVKTLSDVEGLCV+FA   GSSDP+ AVKE+L++EPYTA +
Sbjct:   271 LASIILGVKLGMEPKEAISKVKTLSDVEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEE 330

Query:   173 IEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEED 232
             IEKI EEKL SI  N  +SL VLNAA  +KLHQRAAHVYSEA+RVH FKDTV+SNLS+E+
Sbjct:   331 IEKILEEKLPSIVNNDPTSLAVLNAATHFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEE 390

Query:   233 KLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKES 292
             KLKKLGDLMN+SH+SCSVLYECSCPELEELV VC+ NGALGARLTGAGWGGC VALVKE 
Sbjct:   391 KLKKLGDLMNESHYSCSVLYECSCPELEELVQVCKENGALGARLTGAGWGGCAVALVKEF 450

Query:   293 IDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKF 336
               +QFI  +KE++Y+ R+++GV+   D+ LY+FASKPSSGAA F
Sbjct:   451 DVTQFIPAVKEKYYKKRVEKGVVKKEDMELYLFASKPSSGAAIF 494
GO:0004335 "galactokinase activity" evidence=IEA;IGI;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006012 "galactose metabolic process" evidence=IEA;IDA
GO:0008152 "metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=IEA
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0046835 "carbohydrate phosphorylation" evidence=IEA;IDA
GO:0005829 "cytosol" evidence=IDA
RGD|1308691 Galk2 "galactokinase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1C902 GALK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P1D1 GALK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MFK7 GALK2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1917226 Galk2 "galactokinase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SQG6 GALK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDA6 GALK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-143 galk2 "galactokinase 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|B7ZAX5 GALK2 "cDNA, FLJ79339, highly similar to N-acetylgalactosamine kinase (EC 2.7.1.157)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SEE5GALK1_ARATH2, ., 7, ., 1, ., 60.68860.92010.6270yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.60.914
3rd Layer2.7.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_X0656
galactokinase (EC-2.7.1.6) (496 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.00061661
galactose-1-phosphate uridylyltransferase (EC-2.7.7.10) (348 aa)
•  • •• 0.943
estExt_fgenesh4_pm.C_LG_III0678
hypothetical protein (1114 aa)
• •  •• 0.932
fgenesh4_pg.C_LG_I000259
hypothetical protein (1110 aa)
• •  •• 0.931
gw1.XIX.1583.1
alpha-galactosidase (380 aa)
     •  0.899
gw1.X.3030.1
alpha-galactosidase (EC-2.4.1.67) (369 aa)
     •  0.899
gw1.44.267.1
hypothetical protein (643 aa)
     •  0.899
fgenesh4_pm.C_LG_IV000085
hypothetical protein (379 aa)
     •  0.899
fgenesh4_pg.C_scaffold_164000005
alpha-galactosidase (EC-3.2.1.22) (367 aa)
     •  0.899
eugene3.00101110
alpha-galactosidase (EC-3.2.1.22) (386 aa)
     •  0.899
gw1.VI.1302.1
galactokinase (EC-2.7.1.6) (413 aa)
  •  • •0.841

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
PLN02521497 PLN02521, PLN02521, galactokinase 0.0
COG0153390 COG0153, GalK, Galactokinase [Carbohydrate transpo 3e-36
TIGR00131386 TIGR00131, gal_kin, galactokinase 4e-31
PRK03817351 PRK03817, PRK03817, galactokinase; Provisional 6e-17
PRK05322387 PRK05322, PRK05322, galactokinase; Provisional 2e-15
COG1577307 COG1577, ERG12, Mevalonate kinase [Lipid metabolis 5e-13
PTZ00298328 PTZ00298, PTZ00298, mevalonate kinase; Provisional 5e-13
PRK00555363 PRK00555, PRK00555, galactokinase; Provisional 2e-12
TIGR00549274 TIGR00549, mevalon_kin, mevalonate kinase 2e-12
pfam0854486 pfam08544, GHMP_kinases_C, GHMP kinases C terminal 9e-12
PRK05101382 PRK05101, PRK05101, galactokinase; Provisional 4e-11
PLN02865423 PLN02865, PLN02865, galactokinase 8e-11
PRK03926302 PRK03926, PRK03926, mevalonate kinase; Provisional 9e-10
PTZ00290468 PTZ00290, PTZ00290, galactokinase; Provisional 4e-09
>gnl|CDD|215285 PLN02521, PLN02521, galactokinase Back     alignment and domain information 
 Score =  567 bits (1463), Expect = 0.0
 Identities = 241/336 (71%), Positives = 272/336 (80%), Gaps = 23/336 (6%)

Query: 26  GSGLSSSTAFVCSSTVALMAAFGVEVPK-----------------------AISIMAKSG 62
           GSGLSSS A VCS+ +A+MAA G+   K                       AISIMA+ G
Sbjct: 161 GSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCERHIGTQSGGMDQAISIMAQQG 220

Query: 63  FAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKL 122
            A+LIDFNP+R TDVQLPAGGTFV+A+SLAES KA+TAA+NYNNRVVECRL AIVLA+KL
Sbjct: 221 VAKLIDFNPVRATDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKL 280

Query: 123 GMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLT 182
           GM  +EAISKVKTLSDVEGLCV+FA  +GSSDP  AVKE L + PYTA +IE+I  E LT
Sbjct: 281 GMSAEEAISKVKTLSDVEGLCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLT 340

Query: 183 SIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMN 242
           SIF NS +SL VL AAK +KLHQRA HVYSEAKRVHAF+DTVSS+LSEE+KLKKLGDLMN
Sbjct: 341 SIFKNSPTSLAVLKAAKHFKLHQRAVHVYSEAKRVHAFRDTVSSSLSEEEKLKKLGDLMN 400

Query: 243 DSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLK 302
           +SH+SCSVLYECSCPELEELV VCR+NGALGARLTGAGWGGC VALVKE+I  QFIL LK
Sbjct: 401 ESHYSCSVLYECSCPELEELVKVCRDNGALGARLTGAGWGGCAVALVKEAIVPQFILALK 460

Query: 303 EQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF 338
           E+FY+SRI++GVI   DLGLYVFASKPSSGAA  KF
Sbjct: 461 EKFYKSRIEKGVIKEEDLGLYVFASKPSSGAAILKF 496

Length = 497
>gnl|CDD|223231 COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|232841 TIGR00131, gal_kin, galactokinase Back     alignment and domain information
>gnl|CDD|235163 PRK03817, PRK03817, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|235407 PRK05322, PRK05322, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|224493 COG1577, ERG12, Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|240351 PTZ00298, PTZ00298, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|179063 PRK00555, PRK00555, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|233017 TIGR00549, mevalon_kin, mevalonate kinase Back     alignment and domain information
>gnl|CDD|219894 pfam08544, GHMP_kinases_C, GHMP kinases C terminal Back     alignment and domain information
>gnl|CDD|179937 PRK05101, PRK05101, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|215466 PLN02865, PLN02865, galactokinase Back     alignment and domain information
>gnl|CDD|179677 PRK03926, PRK03926, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|240347 PTZ00290, PTZ00290, galactokinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 338
PLN02521497 galactokinase 100.0
COG0153390 GalK Galactokinase [Carbohydrate transport and met 100.0
PLN02865423 galactokinase 100.0
PTZ00290468 galactokinase; Provisional 100.0
PRK05322387 galactokinase; Provisional 100.0
PRK05101382 galactokinase; Provisional 100.0
TIGR00131386 gal_kin galactokinase. The galactokinases found by 100.0
PRK00555363 galactokinase; Provisional 100.0
KOG0631489 consensus Galactokinase [Carbohydrate transport an 100.0
PRK03817351 galactokinase; Provisional 100.0
PLN02677387 mevalonate kinase 99.94
PTZ00298328 mevalonate kinase; Provisional 99.94
COG1577307 ERG12 Mevalonate kinase [Lipid metabolism] 99.93
TIGR00549273 mevalon_kin mevalonate kinase. Paracoccus exhibits 99.92
COG0083299 ThrB Homoserine kinase [Amino acid transport and m 99.92
TIGR01220358 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-typ 99.91
PRK03926302 mevalonate kinase; Provisional 99.91
COG2605333 Predicted kinase related to galactokinase and meva 99.91
PRK13412974 fkp bifunctional fucokinase/L-fucose-1-P-guanylylt 99.9
PLN02451370 homoserine kinase 99.9
KOG1511397 consensus Mevalonate kinase MVK/ERG12 [Lipid trans 99.86
PRK01212301 homoserine kinase; Provisional 99.86
PTZ00299336 homoserine kinase; Provisional 99.85
TIGR00191302 thrB homoserine kinase. P.aeruginosa homoserine ki 99.85
PRK02534312 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.77
PRK03188300 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.76
TIGR00144324 beta_RFAP_syn beta-RFAP synthase. This protein fam 99.74
PRK00128286 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.74
PRK14616287 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.68
TIGR01920261 Shik_kin_archae shikimate kinase. This model repre 99.66
PRK01123282 shikimate kinase; Provisional 99.66
PRK14613297 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.64
TIGR00154293 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kin 99.62
PRK14612276 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.61
PRK14611275 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.58
PRK14614280 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.58
PRK14615296 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.57
PRK14608290 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.56
TIGR01219454 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, 99.52
PF0854485 GHMP_kinases_C: GHMP kinases C terminal ; InterPro 99.48
PRK14609269 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.48
KOG1537355 consensus Homoserine kinase [Amino acid transport 99.39
PRK00343271 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.32
TIGR01240305 mevDPdecarb diphosphomevalonate decarboxylase. Alt 99.25
COG1907312 Predicted archaeal sugar kinases [General function 99.25
COG1685278 Archaeal shikimate kinase [Amino acid transport an 99.17
PRK00650288 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.15
PRK14610283 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.07
COG1947289 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-p 98.8
PLN02407343 diphosphomevalonate decarboxylase 98.65
PF0028867 GHMP_kinases_N: GHMP kinases N terminal domain; In 98.61
PRK05905258 hypothetical protein; Provisional 98.51
PRK04181257 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 98.4
COG3407329 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid 98.34
COG4542293 PduX Protein involved in propanediol utilization, 98.32
KOG4644948 consensus L-fucose kinase [Carbohydrate transport 98.24
KOG2833395 consensus Mevalonate pyrophosphate decarboxylase [ 97.98
KOG4519459 consensus Phosphomevalonate kinase [Lipid transpor 96.97
COG3890337 ERG8 Phosphomevalonate kinase [Lipid metabolism] 96.48
COG1829283 Predicted archaeal kinase (sugar kinase superfamil 95.28
>PLN02521 galactokinase Back     alignment and domain information 
Probab=100.00  E-value=4.4e-61  Score=483.02  Aligned_cols=326  Identities=74%  Similarity=1.103  Sum_probs=288.8

Q ss_pred             cceEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCCCCcc-----------------------eeeeeccCCcEEEeec
Q 019635           13 QLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPK-----------------------AISIMAKSGFAELIDF   69 (338)
Q Consensus        13 ~gf~~~i~s~vP~gsGLsSSAAl~va~~~Al~~~~~~~ls~-----------------------~as~~g~~g~~l~id~   69 (338)
                      .||++.|.|+||+|+|||||||++||++.|++.+++.++++                       ++|++|++|+++++||
T Consensus       148 ~g~~i~i~s~IP~gsGLgSSAA~~vA~~~al~~~~~~~l~~~~la~la~~~E~~~g~~~g~mDq~as~~g~~g~al~~d~  227 (497)
T PLN02521        148 VGLDVVVDGTVPTGSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCERHIGTQSGGMDQAISIMAQQGVAKLIDF  227 (497)
T ss_pred             CCeEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhCccCCCCChHHHHHHHhcCCCcEEEEec
Confidence            49999999999999999999999999999999999988665                       8999999999999999


Q ss_pred             CCCceEEeeCCCCceEEEEecCCccchhcccchhhhHHHHHHHHHHHHHHHHhCCCchhhhcccccccchhhhhhhhhcc
Q 019635           70 NPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACK  149 (338)
Q Consensus        70 ~~~~~~~v~lp~~~~~vv~~s~v~~~k~~~~~~~yn~R~~ec~~A~~iL~~~~~~~~~~~~~~~~~L~d~~~~~~~~~~~  149 (338)
                      +|++++++|+|.++.|+|+||+++++|+.++++.||+||+||+.|+++|++++++...+....+.+|||+...+....+.
T Consensus       228 ~~l~~~~v~~p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~Aa~~L~~~~~~~~~~~~~~~~~Lrd~~~~~~~~~~~  307 (497)
T PLN02521        228 NPVRATDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKLGMSAEEAISKVKTLSDVEGLCVSFAGS  307 (497)
T ss_pred             CCCceEEeecCCCcEEEEEECCCcccccccccccccHHHHHHHHHHHHHHhhcCCcchhcccccCCHHHHHHHHhhhccc
Confidence            99999999999999999999999999999999999999999999999999887764322112357899986543333455


Q ss_pred             CCCCChHHHHHHhhhcCCCCHHHHHHHhchhhhhhhhcCCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 019635          150 NGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLS  229 (338)
Q Consensus       150 ~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~hv~~E~~rv~~~~~aL~~~~~  229 (338)
                      +++.++.+.++..|.+.+|+.++++++++..+++++.++++++++++.++.|.+|+|++||++|+.||.+++++|++++.
T Consensus       308 ~~~~~~~~~~~~~l~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ra~Hvv~E~~RV~~~~~al~~~~~  387 (497)
T PLN02521        308 HGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAKHFKLHQRAVHVYSEAKRVHAFRDTVSSSLS  387 (497)
T ss_pred             ccchhhHHHhhhhhccccCCHHHHHHHhCCcHHHHhhccccccccccccchhHHhhhhhheecHHHHHHHHHHHHHhcCc
Confidence            66677888899999999999999999988667778878888999999899999999999999999999999999998643


Q ss_pred             ChhhHHHHHHHHHhhHHHHhhhcCCCCHHHHHHHHHHHhCCCcEEEEeCCCCcceEEEEEcCCchHHHHHHHHHHHHhcc
Q 019635          230 EEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSR  309 (338)
Q Consensus       230 ~~~d~~~lg~lm~~sh~slr~~~~vs~peld~l~e~a~~~Ga~GarisGaG~GG~viaL~~~~~~~~~~~~l~~~y~~~~  309 (338)
                      .+.++..||++|+++|+++|++|+||||++|.|+++|++.|++|+||||||||||+++|++++..+++++.+.+.|+++.
T Consensus       388 ~~~~~~~lg~lm~~sh~slr~~~~vS~~elD~lv~~a~~~Ga~GaRltGaG~GG~~i~lv~~~~~~~~~~~l~~~y~~~~  467 (497)
T PLN02521        388 EEEKLKKLGDLMNESHYSCSVLYECSCPELEELVKVCRDNGALGARLTGAGWGGCAVALVKEAIVPQFILALKEKFYKSR  467 (497)
T ss_pred             cchHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCCcEEEECCCCCCeEEEEEECHHHHHHHHHHHHHHHHhhc
Confidence            34459999999999999999999999999999999999999999999999999999999999888999999999999875


Q ss_pred             cCCccccCCCCceeEEEeecCCceeeecC
Q 019635          310 IDRGVINNNDLGLYVFASKPSSGAAKFKF  338 (338)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~p~~Ga~v~~~  338 (338)
                      ++++.+.+.++++.+|+++|++||+++.+
T Consensus       468 ~~~~~~~~~~~~~~~~~~~p~~Ga~~~~~  496 (497)
T PLN02521        468 IEKGVIKEEDLGLYVFASKPSSGAAILKF  496 (497)
T ss_pred             cccccccccCCCCcEEEEecCCCceEeec
Confidence            33334455568899999999999999864

>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02865 galactokinase Back     alignment and domain information
>PTZ00290 galactokinase; Provisional Back     alignment and domain information
>PRK05322 galactokinase; Provisional Back     alignment and domain information
>PRK05101 galactokinase; Provisional Back     alignment and domain information
>TIGR00131 gal_kin galactokinase Back     alignment and domain information
>PRK00555 galactokinase; Provisional Back     alignment and domain information
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03817 galactokinase; Provisional Back     alignment and domain information
>PLN02677 mevalonate kinase Back     alignment and domain information
>PTZ00298 mevalonate kinase; Provisional Back     alignment and domain information
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>TIGR00549 mevalon_kin mevalonate kinase Back     alignment and domain information
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch Back     alignment and domain information
>PRK03926 mevalonate kinase; Provisional Back     alignment and domain information
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] Back     alignment and domain information
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional Back     alignment and domain information
>PLN02451 homoserine kinase Back     alignment and domain information
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism] Back     alignment and domain information
>PRK01212 homoserine kinase; Provisional Back     alignment and domain information
>PTZ00299 homoserine kinase; Provisional Back     alignment and domain information
>TIGR00191 thrB homoserine kinase Back     alignment and domain information
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR00144 beta_RFAP_syn beta-RFAP synthase Back     alignment and domain information
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR01920 Shik_kin_archae shikimate kinase Back     alignment and domain information
>PRK01123 shikimate kinase; Provisional Back     alignment and domain information
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Back     alignment and domain information
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch Back     alignment and domain information
>PF08544 GHMP_kinases_C: GHMP kinases C terminal ; InterPro: IPR013750 This domain is found in homoserine kinases (2 Back     alignment and domain information
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase Back     alignment and domain information
>COG1907 Predicted archaeal sugar kinases [General function prediction only] Back     alignment and domain information
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism] Back     alignment and domain information
>PLN02407 diphosphomevalonate decarboxylase Back     alignment and domain information
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2 Back     alignment and domain information
>PRK05905 hypothetical protein; Provisional Back     alignment and domain information
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism] Back     alignment and domain information
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism] Back     alignment and domain information
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism] Back     alignment and domain information
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism] Back     alignment and domain information
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
2a2d_A478 X-Ray Structure Of Human N-Acetyl Galactosamine Kin 9e-49
2aj4_A548 Crystal Structure Of Saccharomyces Cerevisiae Galac 2e-28
3v5r_A505 Crystal Structure Of The Unliganded Form Of Gal3p L 2e-25
3v2u_C520 Crystal Structure Of The Yeast Gal Regulon Complex 2e-25
2hfu_A332 Crystal Structure Of L. Major Mevalonate Kinase In 3e-10
1s4e_A352 Pyrococcus Furiosus Galactokinase In Complex With G 1e-09
1pie_A419 Crystal Structure Of Lactococcus Lactis Galactokina 2e-09
2hfs_A332 Crystal Structure Of L. Major Mevalonate Kinase Len 2e-09
2cz9_A350 Crystal Structure Of Galactokinase From Pyrococcus 1e-08
2x7i_A308 Crystal Structure Of Mevalonate Kinase From Methici 3e-05
1vis_A324 Crystal Structure Of Mevalonate Kinase Length = 324 2e-04
1kkh_A317 Crystal Structure Of The Methanococcus Jannaschii M 2e-04
2oi2_A292 Streptococcus Pneumoniae Mevalonate Kinase In Compl 9e-04
>pdb|2A2D|A Chain A, X-Ray Structure Of Human N-Acetyl Galactosamine Kinase Complexed With Mn-Amppnp And N-Acetyl Glactosamine Length = 478 Back     alignment and structure 
Iteration: 1

 Score =  190 bits (483), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 177/306 (57%), Gaps = 31/306 (10%)
Query: 34  AFVCSSTVALMAAFGVEVPKAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAE 93
           A +C+ +   +   G  + ++IS +A+ G A+LI+F+P+R TDV+LP+G  FV+A+S  E
Sbjct: 192 AEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVE 251
Query: 94  SLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSS 153
             KA  A S++N RV+ECRL A +LA    ++      KV  L +V+        K G S
Sbjct: 252 MNKA--ATSHFNIRVMECRLAAKLLAKYKSLQ----WDKVLRLEEVQA-------KLGIS 298
Query: 154 --DPVFAVKEFLRKEPYTALDIEKIT----EEKLTSIFANSSSSLDVLNAAKQYKLHQRA 207
             + +   ++ L  EPY   +I +      EE  T I   S ++ DVL     +KL+QRA
Sbjct: 299 LEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQIL--SPNTQDVL----IFKLYQRA 352
Query: 208 AHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCR 267
            HVYSEA RV  FK       + E+ ++ LG+LMN SH SC  +YECSCPEL++LV++CR
Sbjct: 353 KHVYSEAARVLQFKKICEE--APENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICR 410
Query: 268 NNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFAS 327
             GA G+RLTGAGWGGC V++V       F+ N+ + +YQ R D  +         +FA+
Sbjct: 411 KFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQ-RSDGSLAPEKQ---SLFAT 466
Query: 328 KPSSGA 333
           KP  GA
Sbjct: 467 KPGGGA 472
>pdb|2AJ4|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Galactokinase In Complex With Galactose And Mg:amppnp Length = 548 Back     alignment and structure
>pdb|3V5R|A Chain A, Crystal Structure Of The Unliganded Form Of Gal3p Length = 505 Back     alignment and structure
>pdb|3V2U|C Chain C, Crystal Structure Of The Yeast Gal Regulon Complex Of The Repressor, Gal80p, And The Transducer, Gal3p, With Galactose And Atp Length = 520 Back     alignment and structure
>pdb|2HFU|A Chain A, Crystal Structure Of L. Major Mevalonate Kinase In Complex With R-Mevalonate Length = 332 Back     alignment and structure
>pdb|1S4E|A Chain A, Pyrococcus Furiosus Galactokinase In Complex With Galactose, Adp And Magnesium Length = 352 Back     alignment and structure
>pdb|1PIE|A Chain A, Crystal Structure Of Lactococcus Lactis Galactokinase Complexed With Galactose Length = 419 Back     alignment and structure
>pdb|2HFS|A Chain A, Crystal Structure Of L. Major Mevalonate Kinase Length = 332 Back     alignment and structure
>pdb|2CZ9|A Chain A, Crystal Structure Of Galactokinase From Pyrococcus Horikoshi Length = 350 Back     alignment and structure
>pdb|2X7I|A Chain A, Crystal Structure Of Mevalonate Kinase From Methicillin- Resistant Staphylococcus Aureus Mrsa252 Length = 308 Back     alignment and structure
>pdb|1VIS|A Chain A, Crystal Structure Of Mevalonate Kinase Length = 324 Back     alignment and structure
>pdb|1KKH|A Chain A, Crystal Structure Of The Methanococcus Jannaschii Mevalonate Kinase Length = 317 Back     alignment and structure
>pdb|2OI2|A Chain A, Streptococcus Pneumoniae Mevalonate Kinase In Complex With Diphosphomevalonate Length = 292 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 2e-81
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 4e-67
1pie_A419 Galactokinase; galactose, galactosemia, transferas 2e-43
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 2e-42
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 1e-39
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 1e-25
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 5e-25
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 7e-24
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 2e-23
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 4e-19
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 4e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-12
3k17_A365 LIN0012 protein; protein structure initiative II(P 9e-12
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 4e-10
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Length = 478 Back     alignment and structure
 Score =  254 bits (651), Expect = 2e-81
 Identities = 120/335 (35%), Positives = 173/335 (51%), Gaps = 42/335 (12%)

Query: 25  LGSGLSSSTAFVCSSTVALMAAFGVEVPK-----------------------AISIMAKS 61
             SGLSSS+A VC + +  +   G  + K                       +IS +A+ 
Sbjct: 160 PSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEE 219

Query: 62  GFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIK 121
           G A+LI+F+P+R TDV+LP+G  FV+A+S  E  KA  A S++N RV+ECRL A +LA  
Sbjct: 220 GTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKA--ATSHFNIRVMECRLAAKLLAKY 277

Query: 122 LGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKL 181
             ++      KV  L +V+             + +   ++ L  EPY   +I +     L
Sbjct: 278 KSLQWD----KVLRLEEVQAKL-----GISLEEMLLVTEDALHPEPYNPEEICRCLGISL 328

Query: 182 TSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLM 241
             +     S          +KL+QRA HVYSEA RV  FK       + E+ ++ LG+LM
Sbjct: 329 EELRTQILSPNTQD--VLIFKLYQRAKHVYSEAARVLQFKKICEE--APENMVQLLGELM 384

Query: 242 NDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNL 301
           N SH SC  +YECSCPEL++LV++CR  GA G+RLTGAGWGGC V++V       F+ N+
Sbjct: 385 NQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANV 444

Query: 302 KEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKF 336
            + +YQ    R   +       +FA+KP  GA   
Sbjct: 445 HKAYYQ----RSDGSLAPEKQSLFATKPGGGALVL 475
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Length = 520 Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Length = 419 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Length = 350 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Length = 399 Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317 Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Length = 308 Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Length = 332 Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Length = 292 Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Length = 357 Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Length = 395 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Length = 365 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 100.0
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 100.0
1pie_A419 Galactokinase; galactose, galactosemia, transferas 100.0
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 100.0
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 100.0
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 99.97
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 99.96
3gon_A335 Phosphomevalonate kinase; GHMP kinase superfamily, 99.94
3k17_A365 LIN0012 protein; protein structure initiative II(P 99.94
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 99.93
4hac_A321 Mevalonate kinase; GHMP, ATP binding, phosphorylat 99.93
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 99.93
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 99.93
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 99.92
1h72_C296 HK, homoserine kinase; transferase, threonine bios 99.92
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 99.89
3hul_A298 HSK, HK, homoserine kinase; structural genomics, p 99.87
2gs8_A317 Mevalonate pyrophosphate decarboxylase; streptococ 99.85
3pyf_A306 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.83
3qt5_A332 Mevalonate diphosphate decarboxylase; GHMP kinase 99.81
1fi4_A416 Mevalonate 5-diphosphate decarboxylase; mixed alph 99.71
1uek_A275 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 99.68
2v8p_A271 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.65
2hke_A380 Diphosphomevalonate decarboxylase, putative; meval 99.62
3lto_A323 Mevalonate diphosphate decarboxylase; protein stru 99.59
3f0n_A414 Mevalonate pyrophosphate decarboxylase; cholestero 99.54
2ww4_A283 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 99.48
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Back     alignment and structure
Probab=100.00  E-value=5.4e-58  Score=462.50  Aligned_cols=320  Identities=30%  Similarity=0.468  Sum_probs=264.8

Q ss_pred             ccceEEEEEecCCCCCCCChHHHHHHHHHHHHHHHh---CCCCcc-----------------------eeeeeccCCcEE
Q 019635           12 FQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAF---GVEVPK-----------------------AISIMAKSGFAE   65 (338)
Q Consensus        12 ~~gf~~~i~s~vP~gsGLsSSAAl~va~~~Al~~~~---~~~ls~-----------------------~as~~g~~g~~l   65 (338)
                      ..||++.|.|+||+|+||  |||++||++.|++.++   +.++++                       ++|++|++|+++
T Consensus       145 ~~G~~i~i~s~vP~gsGL--SAA~~va~~~Al~~~~~g~~~~l~~~~la~la~~aE~~vG~~~G~mDQ~as~~G~~g~~l  222 (520)
T 3v2u_C          145 LVGAQIFCQSDIPTGGGL--SSAFTCAAALATIRANMGKNFDISKKDLTRITAVAEHYVGVNNGGMDQATSVYGEEDHAL  222 (520)
T ss_dssp             CCCEEEEEEECCCTTSSH--HHHHHHHHHHHHHHHHHCTTCCCBHHHHHHHHTTGGGGGTCCCCSHHHHHHHHCBTTBEE
T ss_pred             CCceEEEEecCCCCCCCH--HHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhCCCCchhhHHHHHhCCCCeEE
Confidence            479999999999999999  9999999999999998   666655                       889999999999


Q ss_pred             EeecCC-CceEEeeCCC----CceEEEEecCCccchhcccchhhhHHHHHHHHHHHHHHHHhCCCch----hhhcccccc
Q 019635           66 LIDFNP-IRTTDVQLPA----GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQ----EAISKVKTL  136 (338)
Q Consensus        66 ~id~~~-~~~~~v~lp~----~~~~vv~~s~v~~~k~~~~~~~yn~R~~ec~~A~~iL~~~~~~~~~----~~~~~~~~L  136 (338)
                      +|||+| ++++++|+|+    ++.|+|+||+++++||.++++.||+||+||+.|+++|++++|+..+    .......+|
T Consensus       223 ~id~~~~l~~~~v~~p~~~~~~~~~vI~ns~v~~~k~~la~s~YN~Rr~eCe~Aa~~L~~~~g~~~~~~~~~~~~~~~sL  302 (520)
T 3v2u_C          223 YVEFRPKLKATPFKFPQLKNHEISFVIANTLVKSNKFETAPTNYNLRVIEVTVAANALATRYSVALPSHKDNSNSERGNL  302 (520)
T ss_dssp             EEECSSSCEEEEECCCCCSSCEEEEEEEECCCCCCHHHHTTTTHHHHHHHHHHHHHHHHHHTTBCCCCCCSCSSCTTCCH
T ss_pred             EEEcCCCceeEEeeCCCccCCCeEEEEEECCCcccccccccchhhHHHHHHHHHHHHHHHhhCCcccccccccccccccH
Confidence            999999 9999999997    8999999999999999999999999999999999999999876411    111112479


Q ss_pred             cchhhhhhh-h------------hccCCCCChHHHHHHhhhcC--CCCHHHHHHHhchhhhhhhhcCCCcchhhhhhhhh
Q 019635          137 SDVEGLCVA-F------------ACKNGSSDPVFAVKEFLRKE--PYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQY  201 (338)
Q Consensus       137 ~d~~~~~~~-~------------~~~~~~~~~~~~~~~~l~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (338)
                      ||+.+.... +            .....+++|.+.+++.|.+.  +||.+|+.+.++.+.+++..++...+++  ..+.|
T Consensus       303 Rdv~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~yt~~e~~~~l~~~~~~l~~~~l~~~~~--~~~~~  380 (520)
T 3v2u_C          303 RDFMDAYYARYENQAQPWNGDIGTGIERLLKMLQLVEESFSRKKSGFTVHEASTALNCSREEFTRDYLTTFPV--RFQVL  380 (520)
T ss_dssp             HHHHHHHHHHHCTTSCCCSSCHHHHHHHHHHHHHHHHHHHTTCTTCBCHHHHHHHTTSCHHHHHHHHTSSSCE--EESCB
T ss_pred             HHHhHhhhhhccccccccccchhhHHHHHHHHHHHHHHHhhhccccccHHHHHHhhcCChhhhhhhhcccccc--ccccH
Confidence            988643211 0            00112334556677777663  9999999999986555543333333333  23567


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHHHHhhHHHHhhhcCCCCHHHHHHHHHHHhCCCcEEEEeCC
Q 019635          202 KLHQRAAHVYSEAKRVHAFKDTVSSNL--SEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGA  279 (338)
Q Consensus       202 ~~~~ra~hv~~E~~rv~~~~~aL~~~~--~~~~d~~~lg~lm~~sh~slr~~~~vs~peld~l~e~a~~~Ga~GarisGa  279 (338)
                      ++|+|++||++|+.||.+++++|++++  .+.+|++.||++|+++|.+||++|+||||++|.|+++|++.|++|+|||||
T Consensus       381 ~l~~RA~HVv~E~~Rv~~~~~al~~~~~~~~~~d~~~lg~lm~~sH~slr~~~~vS~peld~lv~~a~~~Ga~GarlTGa  460 (520)
T 3v2u_C          381 KLYQRAKHVYSESLRVLKALKMMTSATFHTDEDFFTDFGRLMNESQASCDKLYECSCIETNQICSIALANGSFGSRLTGA  460 (520)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHTTCSEEEECSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhCCCCEEEEecC
Confidence            799999999999999999999999962  112469999999999999999999999999999999999999999999999


Q ss_pred             CCcceEEEEE---cCCchHHHHHHHHHHHHhcccCCccccCCCCceeEEEeecCCceeeec
Q 019635          280 GWGGCVVALV---KESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFK  337 (338)
Q Consensus       280 G~GG~viaL~---~~~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~Ga~v~~  337 (338)
                      |||||+|+|+   +++.++++++.|++.|+++++  +.++++++++.+|+++|+.||+++.
T Consensus       461 G~GGc~iaLv~~~~~~~~~~~~~~l~~~y~~~~~--~~~~~~~~~~~~~~~~p~~GA~i~~  519 (520)
T 3v2u_C          461 GWGGCTIHLVPSGANGNVEQVRKALIEKFYNVRY--PDLTDEELKDAIIVSKPALGTCLYE  519 (520)
T ss_dssp             CSSSEEEEEEEESTTCSHHHHHHHHHHHTHHHHC--TTCCHHHHHHHEEECCCCCCSEEEE
T ss_pred             CCCceEEEEEcCCCHHHHHHHHHHHHHHHHhccC--CccccccCCCeEEEecCCCceEEee
Confidence            9999999999   778999999999999998875  2344445678999999999999974
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Back     alignment and structure
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Back     alignment and structure
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei} Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Back     alignment and structure
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A* Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Back     alignment and structure
>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes} Back     alignment and structure
>2gs8_A Mevalonate pyrophosphate decarboxylase; streptococcus pyogen structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas} Back     alignment and structure
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A* Back     alignment and structure
>3qt5_A Mevalonate diphosphate decarboxylase; GHMP kinase family, lyase; 1.85A {Staphylococcus epidermidis} PDB: 3qt6_A* 3qt7_A* 4dpt_A* 4du7_A* 4dpu_A* 3qt8_A* 4dpx_A 4dpy_A* 4du8_A* 4dpw_A* 2hk2_A 2hk3_A Back     alignment and structure
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, CHOL biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2 Back     alignment and structure
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5 Back     alignment and structure
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A* Back     alignment and structure
>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei} Back     alignment and structure
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila} Back     alignment and structure
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A Back     alignment and structure
>2ww4_A 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; non-mevalonate pathway, isoprenoid biosynthesis, transferase; HET: ADP; 2.00A {Escherichia coli} PDB: 1oj4_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 338
d1piea2183 d.58.26.7 (A:214-396) Galactokinase {Lactococcus l 3e-23
d1s4ea2171 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyro 6e-23
d1wuua2176 d.58.26.7 (A:217-392) Galactokinase {Human (Homo s 2e-20
d1kvka2169 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Ratt 9e-16
d1kkha2137 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon 1e-11
d1k47a2135 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PM 5e-06
d1s4ea1176 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococ 0.002
d1wuua1215 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapi 0.004
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 183 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

 Score = 92.8 bits (230), Expect = 3e-23
 Identities = 47/168 (27%), Positives = 68/168 (40%), Gaps = 22/168 (13%)

Query: 169 TALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNL 228
           T LDI+ + E       AN+    D         L +RA H   E  R    +       
Sbjct: 36  TRLDIQSLGELSNEEFDANTDLIGDET-------LIKRARHAVYENNRTKIAQ-----KA 83

Query: 229 SEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCR-NNGALGARLTGAGWGGCVVA 287
                L K G+L+N SH S    YE +  EL+ L    +   G LGAR+TGAG+GGC +A
Sbjct: 84  FVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTGAGFGGCAIA 143

Query: 288 LVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAK 335
           LV     S F   + + + +                 + ++  SG+ K
Sbjct: 144 LVAHDNVSAFRKAVGQVYEEVV---------GYPASFYVAQIGSGSTK 182
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 171 Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 176 Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 169 Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 137 Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Length = 135 Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 176 Back     information, alignment and structure
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
d1piea2183 Galactokinase {Lactococcus lactis [TaxId: 1358]} 100.0
d1s4ea2171 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 100.0
d1wuua2176 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1kvka2169 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.85
d1kkha2137 Mevalonate kinase {Archaeon Methanococcus jannasch 99.68
d1s4ea1176 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 99.53
d1k47a2135 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.51
d1wuua1215 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 99.49
d1piea1205 Galactokinase {Lactococcus lactis [TaxId: 1358]} 99.48
d1h72c2133 Homoserine kinase {Archaeon Methanococcus jannasch 99.18
d1h72c1163 Homoserine kinase {Archaeon Methanococcus jannasch 98.78
d1kkha1180 Mevalonate kinase {Archaeon Methanococcus jannasch 98.64
d1kvka1225 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 98.45
d1k47a1194 Phosphomevalonate kinase (PMK) {Streptococcus pneu 98.18
d1ueka2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 97.56
d1ueka1148 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 96.54
d1oj4a1163 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 96.32
d1oj4a2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 96.21
d1fi4a1188 Mevalonate 5-diphosphate decarboxylase {Baker's ye 95.54
d1fi4a2203 Mevalonate 5-diphosphate decarboxylase {Baker's ye 92.66
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

Probab=100.00  E-value=2.2e-41  Score=296.31  Aligned_cols=182  Identities=27%  Similarity=0.405  Sum_probs=160.6

Q ss_pred             CceEEEEecCCccchhcccchhhhHHHHHHHHHHHHHHHHhCCCchhhhcccccccchhhhhhhhhccCCCCChHHHHHH
Q 019635           82 GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKE  161 (338)
Q Consensus        82 ~~~~vv~~s~v~~~k~~~~~~~yn~R~~ec~~A~~iL~~~~~~~~~~~~~~~~~L~d~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
                      +++|+|+||++   +|.++.+.||+|+.||+.|++.+.+.+|+         .+|+|++                     
T Consensus         1 dy~lvi~dS~v---~h~L~~s~Yn~R~~ec~~a~~~v~~~~~~---------~~L~~v~---------------------   47 (183)
T d1piea2           1 DYDIVIMNTNK---PRALTESKYNERFAETREALKRMQTRLDI---------QSLGELS---------------------   47 (183)
T ss_dssp             TEEEEEEECCC---CCCTTCHHHHHHHHHHHHHHHHHHHHCCC---------SSGGGCC---------------------
T ss_pred             CeEEEEEeCCC---CcCcCcchhHHHHHHHHHHHHHHHHhcCc---------chHhhhc---------------------
Confidence            47899999999   67888999999999999999999887653         5788774                     


Q ss_pred             hhhcCCCCHHHHHHHhchhhhhhhhcCCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Q 019635          162 FLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLM  241 (338)
Q Consensus       162 ~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~hv~~E~~rv~~~~~aL~~~~~~~~d~~~lg~lm  241 (338)
                              .+++.+......++                  .+++|++|+++|+.||.+++++|+++     |++.||++|
T Consensus        48 --------~~~l~~~~~~l~d~------------------~~~rRa~Hvv~En~Rv~~a~~al~~~-----d~~~~G~lm   96 (183)
T d1piea2          48 --------NEEFDANTDLIGDE------------------TLIKRARHAVYENNRTKIAQKAFVAG-----NLTKFGELL   96 (183)
T ss_dssp             --------HHHHHHTGGGTCCH------------------HHHHHHHHHHHHHHHHHHHHHHHHHT-----CHHHHHHHH
T ss_pred             --------HHHHHHHHhhcCCH------------------HHHHHHHHHHHHHHHHHHhhhhhhhc-----cHHHHHHHH
Confidence                    23444433321122                  38899999999999999999999998     899999999


Q ss_pred             HhhHHHHhhhcCCCCHHHHHHHHHHHhC-CCcEEEEeCCCCcceEEEEEcCCchHHHHHHHHHHHHhcccCCccccCCCC
Q 019635          242 NDSHHSCSVLYECSCPELEELVNVCRNN-GALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDL  320 (338)
Q Consensus       242 ~~sh~slr~~~~vs~peld~l~e~a~~~-Ga~GarisGaG~GG~viaL~~~~~~~~~~~~l~~~y~~~~~~~~~~~~~~~  320 (338)
                      ++||.|++++|++|||++|.|++++++. |++|+||||+|||||+++|++.+..+++.+.|.+.|+++++         .
T Consensus        97 ~~Sh~sl~~~~evs~~elD~Lv~~a~~~~G~~GaRmtGgGfGGcvialv~~~~~~~~~~~i~~~y~~~~g---------~  167 (183)
T d1piea2          97 NASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTGAGFGGCAIALVAHDNVSAFRKAVGQVYEEVVG---------Y  167 (183)
T ss_dssp             HHHHHHHHHTSCCCCHHHHHHHHHHHHSTTEEEEEECSSCSSSEEEEEEEGGGHHHHHHHHHHHHHHHHS---------S
T ss_pred             HHHHHHHHHHhcCCCchHHHHHHHHHHhCCCeEeeccccCCCceEEEEecHHHHHHHHHHHHHHHHHhhC---------C
Confidence            9999999999999999999999999875 99999999999999999999999999999999999999886         6


Q ss_pred             ceeEEEeecCCceeee
Q 019635          321 GLYVFASKPSSGAAKF  336 (338)
Q Consensus       321 ~~~~~~~~p~~Ga~v~  336 (338)
                      ++.+|+++|++||+++
T Consensus       168 ~~~~~~~~~~~Ga~~i  183 (183)
T d1piea2         168 PASFYVAQIGSGSTKL  183 (183)
T ss_dssp             CCEEEECCBCCCSBCC
T ss_pred             CCcEEEEecCCCceeC
Confidence            7899999999999875
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ueka1 d.14.1.5 (A:1-148) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1oj4a1 d.14.1.5 (A:1-163) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fi4a2 d.58.26.2 (A:191-393) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure