Citrus Sinensis ID: 020119

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-

MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQRITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP

cccHHHHHcccccccccEEEEEEEEEcccccccEEEEEEEcccccccccccccccccccccccccccccEEEEccEEEEccccccccEEEEEEEEcccccccccccHHHHHHHHHcccccccccEEEccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHEEccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHcccccccccccccccccccEEccccccccEEEEcccccccccEEEEEccccccccHHHHHHHHHHHHccccc

ccHHHHHHcccccccccEEEEEEEEEEcccccccccccccccccccHHHcccEccccccccccccccccEEEEEEEEccccccccccEEEEEEccccccccccccHHHHHHHHHHcHHHHcccccccEEEEEEEccccccccccccccccccccccEEEccccccEcHHHHHHHHHHHHHHccEEEcccccccccHHHHHHHccEEEEEcccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEcccccEEEEcccHHHcccccccccccccccccHHHHHHHHHHEEcccc

MSLLSDLLNLNLSESTDKIIAEYIWIggsgmdmrskartlpgpvsdpsklpkwnydgsstgqapgedsevilypqaifkdpfrrgnnilvmcdaytpagepiptnkrhaaakifshsdvvaeepwygiEQEYTLLQKdvkwplgwpiggypgpqgpyycgvgadkawgrdivDSHYKACLYAGinisgingevmpgqriTEIAGvvlsfdpkpiqgdwngagahanystksmrndgGFEVIKKAIEKLGLRHSEHIAAygegnerrltgkhetadintfkwgvanrgasirvgrdtekegkgyfedrrpasnmdpyVVTSMIAETTILWKP

MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLpgpvsdpsklpKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQRITEIAGVVLSFDPKPIQGDWNGAGAHANystksmrndgGFEVIKKAIEKLGLRHSEHIAAygegnerrltgkhetadintfkwgvanrgasirvgrdtekegkgyfedrrpasnmdpyvVTSMIAETTILWKP

MsllsdllnlnlsesTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLgwpiggypgpqgpyycgvgADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQRITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP

*******LNLNLSESTDKIIAEYIWIGG*****************************************VILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQRITEIAGVVLSFDPKPIQGDWNGAGAHANYST**MRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRV**********************PYVVTSMIAETTILW**

****SDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQRITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP

MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYD********GEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQRITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP

MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSS*****GEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQRITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK*

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		331	2.2.26 [Sep-21-2011]
P51118		356	Glutamine synthetase cyto	no	no	1.0	0.929	0.853	1e-179
Q42899		356	Glutamine synthetase cyto	N/A	no	1.0	0.929	0.851	1e-179
P32289		356	Glutamine synthetase nodu	N/A	no	1.0	0.929	0.856	1e-179
Q56WN1		356	Glutamine synthetase cyto	yes	no	1.0	0.929	0.848	1e-178
P51119		356	Glutamine synthetase cyto	yes	no	1.0	0.929	0.851	1e-178
P04078		356	Glutamine synthetase cyto	N/A	no	1.0	0.929	0.842	1e-177
Q43785		356	Glutamine synthetase nodu	N/A	no	1.0	0.929	0.831	1e-176
O82560		356	Glutamine synthetase cyto	no	no	1.0	0.929	0.839	1e-176
O04867		356	Glutamine synthetase OS=A	N/A	no	1.0	0.929	0.839	1e-176
P00965		356	Glutamine synthetase N-1	N/A	no	1.0	0.929	0.834	1e-176

>sp\|P51118\|GLNA1_VITVI Glutamine synthetase cytosolic isozyme 1 OS=Vitis vinifera GN=GS1-1 PE=2 SV=1	Back alignment and function desciption

 Score =  628 bits (1619), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 304/356 (85%), Positives = 319/356 (89%), Gaps = 25/356 (7%)

Query: 1   MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSST 60
           M+LLSDL+NLNLSE+T+K+I EYIW+GGSGMD+RSKARTL GPVSDP+KLPKWNYDGSST
Sbjct: 1   MALLSDLINLNLSETTEKVIVEYIWVGGSGMDLRSKARTLSGPVSDPAKLPKWNYDGSST 60

Query: 61  GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVV 120
           GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCD YTPAGEPIPTNKR  AAKIFSH DV 
Sbjct: 61  GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRCNAAKIFSHPDVA 120

Query: 121 AEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACL 180
           AE PWYGIEQEYTLLQK+VKWP+GWP+GG+PGPQGPYYCG+GADKAWGRDIVD+HYKACL
Sbjct: 121 AEVPWYGIEQEYTLLQKEVKWPIGWPVGGFPGPQGPYYCGIGADKAWGRDIVDAHYKACL 180

Query: 181 YAGINISGINGEVMPGQ-------------------------RITEIAGVVLSFDPKPIQ 215
           YAGINISGINGEVMPGQ                         RITEIAGVVLSFDPKPIQ
Sbjct: 181 YAGINISGINGEVMPGQWEYQVGPSVGISAGDELWVSRYILERITEIAGVVLSFDPKPIQ 240

Query: 216 GDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETAD 275
           GDWNGAGAH NYSTKSMRNDGGFEVIKKAIEKLGLRH EHIAAYGEGNERRLTG+HETAD
Sbjct: 241 GDWNGAGAHTNYSTKSMRNDGGFEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 276 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 331
           INTF WGVANRGASIRVGRDTEK GKGYFEDRRPASNMDPYVVTSMIAETTILWKP
Sbjct: 301 INTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356

Vitis vinifera (taxid: 29760)
EC: 6EC: .EC: 3EC: .EC: 1EC: .EC: 2

>sp\|Q42899\|GLNA1_LOTJA Glutamine synthetase cytosolic isozyme OS=Lotus japonicus GN=GLN1 PE=2 SV=2	Back alignment and function description

>sp\|P32289\|GLNA_VIGAC Glutamine synthetase nodule isozyme OS=Vigna aconitifolia PE=2 SV=1	Back alignment and function description

>sp\|Q56WN1\|GLN11_ARATH Glutamine synthetase cytosolic isozyme 1-1 OS=Arabidopsis thaliana GN=GLN1-1 PE=1 SV=2	Back alignment and function description

>sp\|P51119\|GLNA2_VITVI Glutamine synthetase cytosolic isozyme 2 OS=Vitis vinifera GN=GS1-2 PE=2 SV=1	Back alignment and function description

>sp\|P04078\|GLNA1_MEDSA Glutamine synthetase cytosolic isozyme OS=Medicago sativa PE=2 SV=1	Back alignment and function description

>sp\|Q43785\|GLNA3_MEDSA Glutamine synthetase nodule isozyme OS=Medicago sativa GN=GS1 PE=2 SV=1	Back alignment and function description

>sp\|O82560\|GLNA2_SOYBN Glutamine synthetase cytosolic isozyme 2 OS=Glycine max PE=2 SV=1	Back alignment and function description

>sp\|O04867\|GLNA1_ALNGL Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE=2 SV=1	Back alignment and function description

>sp\|P00965\|GLNA3_PHAVU Glutamine synthetase N-1 OS=Phaseolus vulgaris GN=Gln-gamma PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		331
2213877		356	glutamine synthetase [Hevea brasiliensis	1.0	0.929	0.870	0.0
224065130		358	predicted protein [Populus trichocarpa]	1.0	0.924	0.865	1e-178
118486183		356	unknown [Populus trichocarpa] gi\|1184868	1.0	0.929	0.865	1e-178
599656		356	glutamate--ammonia ligase [Brassica napu	1.0	0.929	0.859	1e-178
159138927		356	glutamine synthetase [Gossypium raimondi	1.0	0.929	0.867	1e-178
159138921		356	glutamine synthetase [Gossypium herbaceu	1.0	0.929	0.867	1e-178
225451379		356	PREDICTED: glutamine synthetase cytosoli	1.0	0.929	0.859	1e-178
147798954		356	hypothetical protein VITISV_015673 [Viti	1.0	0.929	0.856	1e-177
225456238		356	PREDICTED: glutamine synthetase cytosoli	1.0	0.929	0.853	1e-177
12643762		356	RecName: Full=Glutamine synthetase cytos	1.0	0.929	0.851	1e-177

>gi\|2213877\|gb\|AAB61597.1\| glutamine synthetase [Hevea brasiliensis]	Back alignment and taxonomy information

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/356 (87%), Positives = 325/356 (91%), Gaps = 25/356 (7%)

Query: 1   MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSST 60
           MSLLSDL+NLNLS++TDKIIAEYIWIGGSGMDMRSKARTL GPVSDPSKLPKWNYDGSST
Sbjct: 1   MSLLSDLINLNLSDTTDKIIAEYIWIGGSGMDMRSKARTLSGPVSDPSKLPKWNYDGSST 60

Query: 61  GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVV 120
           GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSH DVV
Sbjct: 61  GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHPDVV 120

Query: 121 AEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACL 180
           AEEPWYGIEQEYTLLQ+DVKWP+GWP+GGYPGPQGPYYC +GADK++GRD+VDSHYK+CL
Sbjct: 121 AEEPWYGIEQEYTLLQRDVKWPIGWPLGGYPGPQGPYYCSIGADKSFGRDVVDSHYKSCL 180

Query: 181 YAGINISGINGEVMPGQ-------------------------RITEIAGVVLSFDPKPIQ 215
           YAGINISGINGEVMPGQ                         RITEIAGVVLSFDPKPIQ
Sbjct: 181 YAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQ 240

Query: 216 GDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETAD 275
           GDWNGAGAH NYSTKSMR+DGG+EVIKKAIEKLGLRH EHIAAYGEGNERRLTG+HETAD
Sbjct: 241 GDWNGAGAHTNYSTKSMRHDGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 276 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 331
           INTF WGVANRGASIRVGRDTEK+GKGYFEDRRPASNMDPYVVTSMIAETTILWKP
Sbjct: 301 INTFLWGVANRGASIRVGRDTEKQGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224065130\|ref\|XP_002301683.1\| predicted protein [Populus trichocarpa] gi\|222843409\|gb\|EEE80956.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|118486183\|gb\|ABK94934.1\| unknown [Populus trichocarpa] gi\|118486859\|gb\|ABK95264.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|599656\|emb\|CAA58118.1\| glutamate--ammonia ligase [Brassica napus]	Back alignment and taxonomy information

>gi\|159138927\|gb\|ABW89463.1\| glutamine synthetase [Gossypium raimondii]	Back alignment and taxonomy information

>gi\|159138921\|gb\|ABW89460.1\| glutamine synthetase [Gossypium herbaceum] gi\|159138933\|gb\|ABW89466.1\| glutamine synthetase [Gossypium hirsutum]	Back alignment and taxonomy information

>gi\|225451379\|ref\|XP_002263856.1\| PREDICTED: glutamine synthetase cytosolic isozyme 2 [Vitis vinifera] gi\|296087096\|emb\|CBI33470.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147798954\|emb\|CAN68162.1\| hypothetical protein VITISV_015673 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225456238\|ref\|XP_002283171.1\| PREDICTED: glutamine synthetase cytosolic isozyme 1 [Vitis vinifera] gi\|1707955\|sp\|P51118.1\|GLNA1_VITVI RecName: Full=Glutamine synthetase cytosolic isozyme 1; AltName: Full=Glutamate--ammonia ligase gi\|1134896\|emb\|CAA63981.1\| glutamine synthetase [Vitis vinifera] gi\|297734368\|emb\|CBI15615.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|12643762\|sp\|Q42899.2\|GLNA1_LOTJA RecName: Full=Glutamine synthetase cytosolic isozyme; AltName: Full=GS1; AltName: Full=Glutamate--ammonia ligase	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		331
TAIR\|locus:2151739		356	GSR 1 "glutamine synthase clon	0.549	0.511	0.829	2.2e-148
TAIR\|locus:2174175		356	GLN1;4 "glutamine synthetase 1	0.549	0.511	0.807	9.8e-146
TAIR\|locus:2088580		354	GLN1.3 "glutamine synthetase 1	0.549	0.514	0.807	1.8e-142
TAIR\|locus:2198080		353	GLN1;5 "glutamine synthetase 1	0.577	0.541	0.727	7.5e-135
TAIR\|locus:2165897		430	GS2 "glutamine synthetase 2" [	0.549	0.423	0.725	7.7e-131
SGD\|S000006239		370	GLN1 "Glutamine synthetase (GS	0.519	0.464	0.489	1.7e-84
ASPGD\|ASPL0000016342		357	glnA [Emericella nidulans (tax	0.386	0.358	0.632	4.5e-84
FB\|FBgn0001145		369	Gs2 "Glutamine synthetase 2" [	0.525	0.471	0.525	5.7e-84
UNIPROTKB\|G4NG12		358	MGG_14279 "Glutamine synthetas	0.386	0.357	0.648	1.1e-82
CGD\|CAL0001010		373	GLN1 [Candida albicans (taxid:	0.389	0.345	0.612	1.7e-82

TAIR\|locus:2151739 GSR 1 "glutamine synthase clone R1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 811 (290.5 bits), Expect = 2.2e-148, Sum P(2) = 2.2e-148
 Identities = 151/182 (82%), Positives = 160/182 (87%)

Query:    16 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75
             TDKIIAEYIW+GGSGMDMRSKARTLPGPV+DPS+LPKWNYDGSSTGQAPGEDSEVILYPQ
Sbjct:    16 TDKIIAEYIWVGGSGMDMRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGEDSEVILYPQ 75

Query:    76 AIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLL 135
             AIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAK+FS+ DV AE PWYGIEQEYTLL
Sbjct:    76 AIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKVFSNPDVAAEVPWYGIEQEYTLL 135

Query:   136 QKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMP 195
             QKDVKWP+                   ADK++GRD+VDSHYKACLYAGINISGINGEVMP
Sbjct:   136 QKDVKWPVGWPIGGYPGPQGPYYCGIGADKSFGRDVVDSHYKACLYAGINISGINGEVMP 195

Query:   196 GQ 197
             GQ
Sbjct:   196 GQ 197

GO:0003824 "catalytic activity" evidence=IEA

GO:0004356 "glutamate-ammonia ligase activity" evidence=IEA;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005829 "cytosol" evidence=TAS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0042128 "nitrate assimilation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0010150 "leaf senescence" evidence=IEP

GO:0005507 "copper ion binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR\|locus:2174175 GLN1;4 "glutamine synthetase 1;4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2088580 GLN1.3 "glutamine synthetase 1.3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2198080 GLN1;5 "glutamine synthetase 1;5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2165897 GS2 "glutamine synthetase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

SGD\|S000006239 GLN1 "Glutamine synthetase (GS)" [Saccharomyces cerevisiae (taxid:4932)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000016342 glnA [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

FB\|FBgn0001145 Gs2 "Glutamine synthetase 2" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|G4NG12 MGG_14279 "Glutamine synthetase" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

CGD\|CAL0001010 GLN1 [Candida albicans (taxid:5476)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22504	GLNA1_DAUCA	6, ., 3, ., 1, ., 2	0.7677	0.9879	0.9289	N/A	no
P08282	GLNA1_PEA	6, ., 3, ., 1, ., 2	0.8186	0.9909	0.9239	N/A	no
Q8GXW5	GLN15_ARATH	6, ., 3, ., 1, ., 2	0.7751	0.9456	0.8866	no	no
Q8X169	GLNA_AMAMU	6, ., 3, ., 1, ., 2	0.5539	0.9728	0.9096	N/A	no
P04770	GLNA1_PHAVU	6, ., 3, ., 1, ., 2	0.8230	1.0	0.9297	N/A	no
P14654	GLN12_ORYSJ	6, ., 3, ., 1, ., 2	0.8	0.9969	0.9243	no	no
P14656	GLN11_ORYSJ	6, ., 3, ., 1, ., 2	0.8117	1.0	0.9297	yes	no
P04771	GLNA2_PHAVU	6, ., 3, ., 1, ., 2	0.8314	1.0	0.9297	N/A	no
Q43785	GLNA3_MEDSA	6, ., 3, ., 1, ., 2	0.8314	1.0	0.9297	N/A	no
P15102	GLNA4_PHAVU	6, ., 3, ., 1, ., 2	0.75	1.0	0.7715	N/A	no
Q9FMD9	GLN14_ARATH	6, ., 3, ., 1, ., 2	0.8314	1.0	0.9297	no	no
Q9LVI8	GLN13_ARATH	6, ., 3, ., 1, ., 2	0.8300	0.9909	0.9265	no	no
Q43066	GLNA4_PEA	6, ., 3, ., 1, ., 2	0.8225	0.9969	0.9243	N/A	no
O00088	GLNA_AGABI	6, ., 3, ., 1, ., 2	0.5596	0.9728	0.9096	N/A	no
P25462	GLNAC_MAIZE	6, ., 3, ., 1, ., 2	0.7308	0.9909	0.7754	N/A	no
P04078	GLNA1_MEDSA	6, ., 3, ., 1, ., 2	0.8426	1.0	0.9297	N/A	no
Q06378	GLNA3_HORVU	6, ., 3, ., 1, ., 2	0.7936	0.9637	0.8960	N/A	no
Q8LCE1	GLN12_ARATH	6, ., 3, ., 1, ., 2	0.8230	1.0	0.9297	no	no
Q6FMT6	GLNA_CANGA	6, ., 3, ., 1, ., 2	0.5476	0.9214	0.8198	yes	no
P14636	GLNA3_LUPAN	6, ., 3, ., 1, ., 2	0.7936	0.8761	0.9206	N/A	no
P23712	GLNA_LACSA	6, ., 3, ., 1, ., 2	0.8248	0.9939	0.9189	N/A	no
O82560	GLNA2_SOYBN	6, ., 3, ., 1, ., 2	0.8398	1.0	0.9297	no	no
P38562	GLNA4_MAIZE	6, ., 3, ., 1, ., 2	0.8061	0.9969	0.9295	N/A	no
P38563	GLNA5_MAIZE	6, ., 3, ., 1, ., 2	0.7943	0.9969	0.9243	N/A	no
P38560	GLNA2_MAIZE	6, ., 3, ., 1, ., 2	0.7808	0.9969	0.8967	N/A	no
P38561	GLNA3_MAIZE	6, ., 3, ., 1, ., 2	0.8033	1.0	0.9297	N/A	no
O04867	GLNA1_ALNGL	6, ., 3, ., 1, ., 2	0.8398	1.0	0.9297	N/A	no
Q96UV5	GLNA_HEBCY	6, ., 3, ., 1, ., 2	0.5637	0.9305	0.8700	N/A	no
Q42624	GLNAC_BRANA	6, ., 3, ., 1, ., 2	0.7415	1.0	0.7733	N/A	no
Q56WN1	GLN11_ARATH	6, ., 3, ., 1, ., 2	0.8483	1.0	0.9297	yes	no
Q4W8D0	GLN13_ORYSJ	6, ., 3, ., 1, ., 2	0.7774	0.9969	0.8918	no	no
P51118	GLNA1_VITVI	6, ., 3, ., 1, ., 2	0.8539	1.0	0.9297	no	no
P51119	GLNA2_VITVI	6, ., 3, ., 1, ., 2	0.8511	1.0	0.9297	yes	no
O22506	GLNA2_DAUCA	6, ., 3, ., 1, ., 2	0.7303	1.0	0.7662	N/A	no
P13564	GLNA2_HORVU	6, ., 3, ., 1, ., 2	0.7252	0.9909	0.7557	N/A	no
P52782	GLNA_LUPLU	6, ., 3, ., 1, ., 2	0.8328	0.9909	0.9291	N/A	no
P52783	GLNA_PINSY	6, ., 3, ., 1, ., 2	0.7915	0.9969	0.9243	N/A	no
P24099	GLNA1_SOYBN	6, ., 3, ., 1, ., 2	0.8174	0.9969	0.9295	no	no
P20478	GLNA2_DROME	6, ., 3, ., 1, ., 2	0.5449	0.9728	0.8726	yes	no
Q9XQ94	GLNA2_MEDSA	6, ., 3, ., 1, ., 2	0.75	1.0	0.7733	N/A	no
Q42899	GLNA1_LOTJA	6, ., 3, ., 1, ., 2	0.8511	1.0	0.9297	N/A	no
P38559	GLNA1_MAIZE	6, ., 3, ., 1, ., 2	0.7909	0.9939	0.9215	N/A	no
P12424	GLNA_NICPL	6, ., 3, ., 1, ., 2	0.8366	0.9969	0.9269	N/A	no
P32289	GLNA_VIGAC	6, ., 3, ., 1, ., 2	0.8567	1.0	0.9297	N/A	no
Q42688	GLNA1_CHLRE	6, ., 3, ., 1, ., 2	0.5694	0.9818	0.8507	N/A	no
P07694	GLNA3_PEA	6, ., 3, ., 1, ., 2	0.8253	0.9969	0.9243	N/A	no
P00965	GLNA3_PHAVU	6, ., 3, ., 1, ., 2	0.8342	1.0	0.9297	N/A	no
P08281	GLNA2_PEA	6, ., 3, ., 1, ., 2	0.7443	1.0	0.7697	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.3.1	0.998
3rd Layer	6.3.1.2	0.994

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		331
PLN02284		354	PLN02284, PLN02284, glutamine synthetase	0.0
PLN03036		432	PLN03036, PLN03036, glutamine synthetase; Provisio	0.0
pfam00120		259	pfam00120, Gln-synt_C, Glutamine synthetase, catal	2e-65
COG0174		443	COG0174, GlnA, Glutamine synthetase [Amino acid tr	9e-52
pfam03951		84	pfam03951, Gln-synt_N, Glutamine synthetase, beta-	2e-17
TIGR00653		459	TIGR00653, GlnA, glutamine synthetase, type I	7e-10

>gnl\|CDD\|177922 PLN02284, PLN02284, glutamine synthetase	Back alignment and domain information

 Score =  727 bits (1879), Expect = 0.0
 Identities = 310/354 (87%), Positives = 319/354 (90%), Gaps = 25/354 (7%)

Query: 1   MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSST 60
           MSLLSDL+NLNLS+STDKIIAEYIWIGGSGMD+RSKARTLPGPV+DPSKLPKWNYDGSST
Sbjct: 1   MSLLSDLINLNLSDSTDKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSST 60

Query: 61  GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVV 120
           GQAPGEDSEVILYPQAIFKDPFR GNNILVMCDAYTPAGEPIPTNKR  AAKIFSH DV 
Sbjct: 61  GQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDAYTPAGEPIPTNKRAKAAKIFSHPDVA 120

Query: 121 AEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACL 180
           AEEPWYGIEQEYTLLQKDVKWPLGWP+GGYPGPQGPYYCGVGADKA+GRDIVD+HYKACL
Sbjct: 121 AEEPWYGIEQEYTLLQKDVKWPLGWPVGGYPGPQGPYYCGVGADKAFGRDIVDAHYKACL 180

Query: 181 YAGINISGINGEVMPGQ-------------------------RITEIAGVVLSFDPKPIQ 215
           YAGINISGINGEVMPGQ                         RITEIAGVV+SFDPKPI 
Sbjct: 181 YAGINISGINGEVMPGQWEFQVGPVVGISAGDQLWVARYILERITEIAGVVVSFDPKPIP 240

Query: 216 GDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETAD 275
           GDWNGAGAH NYSTKSMR DGG+EVIKKAIEKLGLRH EHIAAYGEGNERRLTGKHETAD
Sbjct: 241 GDWNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETAD 300

Query: 276 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW 329
           INTF WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW
Sbjct: 301 INTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW 354

Length = 354

>gnl\|CDD\|178603 PLN03036, PLN03036, glutamine synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|215731 pfam00120, Gln-synt_C, Glutamine synthetase, catalytic domain	Back alignment and domain information

>gnl\|CDD\|223252 COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|217811 pfam03951, Gln-synt_N, Glutamine synthetase, beta-Grasp domain	Back alignment and domain information

>gnl\|CDD\|233073 TIGR00653, GlnA, glutamine synthetase, type I	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		331
PLN02284		354	glutamine synthetase	100.0
PLN03036		432	glutamine synthetase; Provisional	100.0
COG0174		443	GlnA Glutamine synthetase [Amino acid transport an	100.0
TIGR00653		460	GlnA glutamine synthetase, type I. Alternate name:	100.0
PRK09469		469	glnA glutamine synthetase; Provisional	100.0
TIGR03105		435	gln_synth_III glutamine synthetase, type III. This	100.0
PF00120		259	Gln-synt_C: Glutamine synthetase, catalytic domain	100.0
KOG0683		380	consensus Glutamine synthetase [Amino acid transpo	100.0
PF03951		84	Gln-synt_N: Glutamine synthetase, beta-Grasp domai	99.58
COG3968		724	Uncharacterized protein related to glutamine synth	99.46
TIGR02050		287	gshA_cyan_rel uncharacterized enzyme. This family	97.84
PRK13517		373	carboxylate-amine ligase; Provisional	97.65
PRK13515		371	carboxylate-amine ligase; Provisional	97.5
PRK13516		373	gamma-glutamyl:cysteine ligase; Provisional	97.23
COG2170		369	Uncharacterized conserved protein [Function unknow	97.01
PRK13518		357	carboxylate-amine ligase; Provisional	95.44
PLN02611		482	glutamate--cysteine ligase	95.07
KOG0683		380	consensus Glutamine synthetase [Amino acid transpo	93.97
TIGR01436		446	glu_cys_lig_pln glutamate--cysteine ligase, plant	88.88

>PLN02284 glutamine synthetase	Back alignment and domain information

Probab=100.00  E-value=2e-86  Score=642.35  Aligned_cols=329  Identities=94%  Similarity=1.535  Sum_probs=293.4

Q ss_pred             ChhhHHhhcCCCCCCCCEEEEEEEEEeCCCCceeeeEEeCCCCCCCCCCCCcccccCCCCCCCCCCCCcEEEEEEEeeEe
Q 020119            1 MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKD   80 (331)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~v~~~~~D~~G~~~rgk~~~~~~~~~~~~~~~~~~~dg~~~g~~~~~~~D~~l~PD~~~~~   80 (331)
                      ||.++...+++++++.+++.++|+|+|+.++++|||.+++.++++.+++.++|+||||++|+..++++|++|+||.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~y~wi~~~~~dl~g~~~~~~~~~~~~~~~~~~~fdGssi~~~~~~~sD~~l~PDt~~~~   80 (354)
T PLN02284          1 MSLLSDLINLNLSDSTDKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKD   80 (354)
T ss_pred             CchhhhhHhhcccCcCCeEEEEEEEEEEEecCCCCceEEecccccccccCCceeecCCCCCCccCCCceEEEEccEEEEC
Confidence            45556667777779999999999999999999999999999998888888999999999998888999999999998999


Q ss_pred             CCCCCCeEEEEEEeecCCCCcCCCChHHHHHHHHHHHhhcCCcceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCCcccc
Q 020119           81 PFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCG  160 (331)
Q Consensus        81 Pw~~~~~a~vl~d~~~~~G~P~~~~pR~~Lk~~l~~l~~~G~~~~~g~E~EF~l~~~~~~~~~g~~~~~~~~~~~~~~~~  160 (331)
                      ||.++++++|+||++++||+|++.|||.+|||+++++++.|+++++|+|+|||||+.+..++.|++..+.+.++++||+.
T Consensus        81 Pw~~~~~~~vlcdv~~~dG~p~~~dPR~vL~r~~~~~~~~g~~~~~G~E~EF~lf~~~~~~~~g~~~~~~~~~~~~y~~~  160 (354)
T PLN02284         81 PFRGGNNILVMCDAYTPAGEPIPTNKRAKAAKIFSHPDVAAEEPWYGIEQEYTLLQKDVKWPLGWPVGGYPGPQGPYYCG  160 (354)
T ss_pred             CCCCCCeEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHhcCCceeEEeceEEEEEecCCcccCCCCCCCcccCCCCcccC
Confidence            99765789999999999999999999999999999999999999999999999998643223344433355677888887


Q ss_pred             CccchhhHHHHHHHHHHHHHHcCceeeeecCCCCchH-------------------------HHHHHcCCeeeecccccC
Q 020119          161 VGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQ-------------------------RITEIAGVVLSFDPKPIQ  215 (331)
Q Consensus       161 ~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gpGQ-------------------------~vA~~~Gl~aTFmpKP~~  215 (331)
                      .+.+..+.++++++|+++|+++||+|+++|||+||||                         +||++||+.|||||||+.
T Consensus       161 ~~~~~~~~~~~~~~l~~~l~~~Gi~ve~~h~E~apGQ~Ei~l~~~d~l~aAD~~~~~K~vvk~vA~~~Gl~ATFMPKP~~  240 (354)
T PLN02284        161 VGADKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPVVGISAGDQLWVARYILERITEIAGVVVSFDPKPIP  240 (354)
T ss_pred             cchhhHHHHHHHHHHHHHHHHCCCCeEEEEcCcCCCceEEEecCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEcCCCCC
Confidence            7766556799999999999999999999999999999                         899999999999999987


Q ss_pred             CCCCCceeeeeecccccccCCChHHHHHHHHHHHHHHHHHhhcccccccccCCCCCCCCCCCceeeccCCCcceeEeccc
Q 020119          216 GDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRD  295 (331)
Q Consensus       216 ~d~~GsG~H~H~Sl~~~~~~~g~n~~~~~i~gl~L~h~~al~a~~~NSYkRl~p~~~ap~~~~~~WG~~NR~a~iRvp~~  295 (331)
                      ++++|||||+|+|||++++++|.|+|+++++|++|+|+++|+||++||||||+|++|||.+++++||.+||+++||||..
T Consensus       241 ~~~~GSGmH~H~SL~~~~~~gg~~~~~~~l~~~~l~h~~~l~a~~~NSYkRL~p~~eap~~~~~~wg~~NRsa~iRIP~~  320 (354)
T PLN02284        241 GDWNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINTFSWGVANRGASIRVGRD  320 (354)
T ss_pred             CCCccCcceeecChhhcccCCcHHHHHHHHHHHHHHHHHHhhhhhcCcHhhcCCCccCcccccceeecCCCceeEEECCC
Confidence            55799999999999975434788999999999999999999999999999999999999656999999999999999976


Q ss_pred             CCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 020119          296 TEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW  329 (331)
Q Consensus       296 ~~~~~~~riE~R~~da~aNPYLalAailaAgl~g  329 (331)
                      ....+++|||+|+||++|||||++||+|++.+.+
T Consensus       321 ~~~~~~~riE~R~pd~~aNPYLa~aaila~~~~~  354 (354)
T PLN02284        321 TEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW  354 (354)
T ss_pred             CCCCCCCEEEEcCCCCCCCHHHHHHHHHHHHhcC
Confidence            5333457999999999999999999999998763

>PLN03036 glutamine synthetase; Provisional	Back alignment and domain information

>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR00653 GlnA glutamine synthetase, type I	Back alignment and domain information

>PRK09469 glnA glutamine synthetase; Provisional	Back alignment and domain information

>TIGR03105 gln_synth_III glutamine synthetase, type III	Back alignment and domain information

>PF00120 Gln-synt_C: Glutamine synthetase, catalytic domain; InterPro: IPR008146 Glutamine synthetase (6	Back alignment and domain information

>KOG0683 consensus Glutamine synthetase [Amino acid transport and metabolism]	Back alignment and domain information

>PF03951 Gln-synt_N: Glutamine synthetase, beta-Grasp domain; InterPro: IPR008147 Glutamine synthetase (6	Back alignment and domain information

>COG3968 Uncharacterized protein related to glutamine synthetase [General function prediction only]	Back alignment and domain information

>TIGR02050 gshA_cyan_rel uncharacterized enzyme	Back alignment and domain information

>PRK13517 carboxylate-amine ligase; Provisional	Back alignment and domain information

>PRK13515 carboxylate-amine ligase; Provisional	Back alignment and domain information

>PRK13516 gamma-glutamyl:cysteine ligase; Provisional	Back alignment and domain information

>COG2170 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK13518 carboxylate-amine ligase; Provisional	Back alignment and domain information

>PLN02611 glutamate--cysteine ligase	Back alignment and domain information

>KOG0683 consensus Glutamine synthetase [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR01436 glu_cys_lig_pln glutamate--cysteine ligase, plant type	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		331
2d3a_A		356	Crystal Structure Of The Maize Glutamine Synthetase		1e-152
3fky_A		370	Crystal Structure Of The Glutamine Synthetase Gln1d		2e-87
2uu7_A		381	Crystal Structure Of Apo Glutamine Synthetase From		5e-81
2ojw_A		384	Crystal Structure Of Human Glutamine Synthetase In		2e-80

>pdb|2D3A|A Chain A, Crystal Structure Of The Maize Glutamine Synthetase Complexed With Adp And Methionine Sulfoximine Phosphate Length = 356

Back alignment and structure

Iteration: 1

Score = 533 bits (1372), Expect = e-152, Method: Compositional matrix adjust. Identities = 263/341 (77%), Positives = 283/341 (82%), Gaps = 25/341 (7%) Query: 16 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75 T+KIIAEYIWIGGSGMD+RSKARTLPGPV+DPSKLPKWNYDGSSTGQAPGEDSEVILYPQ Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75 Query: 76 AIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLL 135 AIFKDPFRRGNNILVMCD YTPAGEPIPTNKR++AAKIFS +V AEEPWYGIEQEYTLL Sbjct: 76 AIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEVAAEEPWYGIEQEYTLL 135 Query: 136 QKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMP 195 QKD WPL A+K++GRDIVD+HYKACLYAGINISGINGEVMP Sbjct: 136 QKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMP 195 Query: 196 GQ-------------------------RITEIAGVVLSFDPKPIQGDWNGAGAHANYSTK 230 GQ RITEIAGVV++FDPKPI GDWNGAGAH NYST+ Sbjct: 196 GQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTE 255 Query: 231 SMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASI 290 SMR +GG+EVIK AIEKL LRH EHIAAYGEGNERRLTG+HETADINTF WGVANRGAS+ Sbjct: 256 SMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASV 315 Query: 291 RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 331 RVGR+TE+ GKGYFEDRRPASNMDPYVVTSMIAETTI+WKP Sbjct: 316 RVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETTIVWKP 356

PyMOL of 2d3a

>pdb|3FKY|A Chain A, Crystal Structure Of The Glutamine Synthetase Gln1deltan18 From The Yeast Saccharomyces Cerevisiae Length = 370

Back alignment and structure

>pdb|2UU7|A Chain A, Crystal Structure Of Apo Glutamine Synthetase From Dog ( Canis Familiaris) Length = 381

Back alignment and structure

>pdb|2OJW|A Chain A, Crystal Structure Of Human Glutamine Synthetase In Complex With Adp And Phosphate Length = 384

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		331
2d3a_A		356	Glutamine synthetase; ligase; HET: P3S ADP; 2.63A	0.0
2ojw_A		384	Glutamine synthetase; amino-acid biosynthesis, lig	1e-177
3fky_A		370	Glutamine synthetase; beta-grAsp, catalytic domain	1e-171
2j9i_A		421	Glutamate-ammonia ligase domain-containing protein	4e-07
3qaj_A		444	Glutamine synthetase; AMP-PCP, ACP, ligase; HET: G	2e-05

>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Length = 356	Back alignment and structure

 Score =  533 bits (1376), Expect = 0.0
 Identities = 289/356 (81%), Positives = 316/356 (88%), Gaps = 25/356 (7%)

Query: 1   MSLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSST 60
           M+ L+DL+NLNLS++T+KIIAEYIWIGGSGMD+RSKARTLPGPV+DPSKLPKWNYDGSST
Sbjct: 1   MACLTDLVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSST 60

Query: 61  GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVV 120
           GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCD YTPAGEPIPTNKR++AAKIFS  +V 
Sbjct: 61  GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEVA 120

Query: 121 AEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDSHYKACL 180
           AEEPWYGIEQEYTLLQKD  WPLGWPIGG+PGPQGPYYCG+GA+K++GRDIVD+HYKACL
Sbjct: 121 AEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACL 180

Query: 181 YAGINISGINGEVMPGQ-------------------------RITEIAGVVLSFDPKPIQ 215
           YAGINISGINGEVMPGQ                         RITEIAGVV++FDPKPI 
Sbjct: 181 YAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIP 240

Query: 216 GDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETAD 275
           GDWNGAGAH NYST+SMR +GG+EVIK AIEKL LRH EHIAAYGEGNERRLTG+HETAD
Sbjct: 241 GDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 276 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 331
           INTF WGVANRGAS+RVGR+TE+ GKGYFEDRRPASNMDPYVVTSMIAETTI+WKP
Sbjct: 301 INTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETTIVWKP 356

PyMOL of 2d3a

>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Length = 384	Back alignment and structure

>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Length = 370	Back alignment and structure

>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} Length = 421	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		331
3fky_A		370	Glutamine synthetase; beta-grAsp, catalytic domain	100.0
2d3a_A		356	Glutamine synthetase; ligase; HET: P3S ADP; 2.63A	100.0
2ojw_A		384	Glutamine synthetase; amino-acid biosynthesis, lig	100.0
3qaj_A		444	Glutamine synthetase; AMP-PCP, ACP, ligase; HET: G	100.0
3ng0_A		473	Glutamine synthetase; GSI, nitrogen metabolism, sy	100.0
4hpp_A		443	Probable glutamine synthetase; glutamine synthase	100.0
4acf_A		486	Glutamine synthetase 1; ligase, nucleotide-binding	100.0
1f52_A		468	Glutamine synthetase; ADP, MPD, ligase; HET: ADP;	100.0
2j9i_A		421	Glutamate-ammonia ligase domain-containing protein	100.0
3o6x_A		729	Glutamine synthetase; type III, beta barrel,dodeca	100.0
1r8g_A		372	Hypothetical protein YBDK; structural genomics, un	96.72
2gwd_A		449	Glutamate cysteine ligase; disulfide bridges, glut	95.51

>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}	Back alignment and structure

Probab=100.00  E-value=9e-89  Score=661.19  Aligned_cols=320  Identities=57%  Similarity=1.044  Sum_probs=270.9

Q ss_pred             hhhHHhhcCCCCCCCCEEEEEEEEEeCCCCceeeeEEeCCCCCCCCCCCCcccccCCCCCCCCCCCCcEEEEEEEeeEeC
Q 020119            2 SLLSDLLNLNLSESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDP   81 (331)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~v~~~~~D~~G~~~rgk~~~~~~~~~~~~~~~~~~~dg~~~g~~~~~~~D~~l~PD~~~~~P   81 (331)
                      .++++||+|   +|.++++|+++|+|++| .+|||+++++.+.+.++++++|+||||++|+..++++|++|+||+++++|
T Consensus        10 ~~~~~~~~l---~~~~i~~v~~~~~D~~G-~lR~K~~~~~~~~~~~~~~~~~~fDGss~g~~~~~~sD~~l~Pdt~~~~P   85 (370)
T 3fky_A           10 QILQKYLEL---DQRGRIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDP   85 (370)
T ss_dssp             --------------CCCEEEEEEEECSSS-CEEEEEEEESSCCCSGGGSCCEEECGGGTTSSCCCC--EEEEEEEEEECT
T ss_pred             HHHHHHhCc---ccCCeEEEEEEEEcCCC-CeEEEEEECccccchHHhCCccccCCcccccccCCCCCeeEeeeEEEEcC
Confidence            468999999   99999999999999999 99999999998888888888999999999998889999999999999999


Q ss_pred             CCCCCeEEEEEEeecCCCCcCCCChHHHHHHHHHHHhhcCCcceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCCccccC
Q 020119           82 FRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGV  161 (331)
Q Consensus        82 w~~~~~a~vl~d~~~~~G~P~~~~pR~~Lk~~l~~l~~~G~~~~~g~E~EF~l~~~~~~~~~g~~~~~~~~~~~~~~~~~  161 (331)
                      |+++++++|+||++++||+|++.|||++|||++++++  |+++++|+|+|||||+.+.. +.+++.++.|.++++||+..
T Consensus        86 w~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~--g~~~~~G~E~EF~Lf~~~~~-~~~~p~~~~p~~~g~yy~~~  162 (370)
T 3fky_A           86 FRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK--DEEIWFGLEQEYTLFDMYDD-VYGWPKGGYPAPQGPYYCGV  162 (370)
T ss_dssp             TTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTG--GGCCEEEEEEEEEEECTTSS-BTTCCTTSBCSCSSSCTTCC
T ss_pred             CCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhc--CCCceEEeeeEEEEEccCCC-cccCCCCCccCCCCcccccc
Confidence            9986699999999999999999999999999999887  99999999999999987642 45676655678889998877


Q ss_pred             ccchhhHHHHHHHHHHHHHHcCceeeeecCCCCchH-------------------------HHHHHcCCeeeecccccCC
Q 020119          162 GADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQ-------------------------RITEIAGVVLSFDPKPIQG  216 (331)
Q Consensus       162 ~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gpGQ-------------------------~vA~~~Gl~aTFmpKP~~~  216 (331)
                      +.+..+.++++++++++|+++||+||++|||+||||                         +||++||+.|||||||+.+
T Consensus       163 ~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~~vk~vA~~~G~~ATFmpKP~~g  242 (370)
T 3fky_A          163 GAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKG  242 (370)
T ss_dssp             STTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHTTTCEEECCSCSSSS
T ss_pred             chhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCcEEEEcccccCC
Confidence            655555699999999999999999999999999999                         9999999999999999984


Q ss_pred             CCCCceeeeeecccccccCCChHHHHHHHHHHHH-HHHHHhhcccccccccCCCCCCCCCCCceeeccCCCcceeEeccc
Q 020119          217 DWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGL-RHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRD  295 (331)
Q Consensus       217 d~~GsG~H~H~Sl~~~~~~~g~n~~~~~i~gl~L-~h~~al~a~~~NSYkRl~p~~~ap~~~~~~WG~~NR~a~iRvp~~  295 (331)
                      |++|||||+|+|||+.++++|.+.++++++|| + +|+++|+||+.||||||+|++|||...+++||.+||+++||||..
T Consensus       243 d~~GSG~H~H~Sl~~~~~~~g~~~~~~~i~gl-~~~h~~~i~a~~~nSYkRL~~~~eap~~~~~sWG~~NRsa~iRIp~~  321 (370)
T 3fky_A          243 DWNGAGCHANVSTKEMRQPGGTKYIEQAIEKL-SKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPRS  321 (370)
T ss_dssp             SSCCCBEEEEEECHHHHSSSTHHHHHHHHHHH-HHTHHHHHHSSCTTGGGC--------CCSCCCEEESCTTSSEEECHH
T ss_pred             CCCcccceeeeccccccCCCCHHHHHHHHHHH-HHHhHHHHHHHccchhhhcCCCccCCCcccceEecCCCceeEEecCC
Confidence            48999999999999865556778899999999 7 999999999999999999999999544689999999999999975


Q ss_pred             CCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 020119          296 TEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW  329 (331)
Q Consensus       296 ~~~~~~~riE~R~~da~aNPYLalAailaAgl~g  329 (331)
                      ....+++|||+|+||++|||||++||||+|||+|
T Consensus       322 ~~~~~~~riE~R~pda~aNPYLa~Aailaagl~G  355 (370)
T 3fky_A          322 VAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGA  355 (370)
T ss_dssp             HHHHTCCCEEECCCBTTCCHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHhcC
Confidence            4322346999999999999999999999999999

PyMOL of 3fky

>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*	Back alignment and structure

>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A	Back alignment and structure

>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}	Back alignment and structure

>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}	Back alignment and structure

>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*	Back alignment and structure

>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A	Back alignment and structure

>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}	Back alignment and structure

>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}	Back alignment and structure

>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A	Back alignment and structure

>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		331
d1f52a2		368	Glutamine synthetase, C-terminal domain {Salmonell	100.0
d2bvca2		374	Glutamine synthetase, C-terminal domain {Mycobacte	100.0
d1f52a1		100	Glutamine synthetase, N-terminal domain {Salmonell	99.62
d2bvca1		100	Glutamine synthetase, N-terminal domain {Mycobacte	99.59
d1r8ga_		368	Carboxylate-amine ligase YbdK {Escherichia coli [T	96.76

>d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Glutamine synthetase/guanido kinase
superfamily: Glutamine synthetase/guanido kinase
family: Glutamine synthetase catalytic domain
domain: Glutamine synthetase, C-terminal domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=100.00  E-value=1.5e-60  Score=460.12  Aligned_cols=220  Identities=24%  Similarity=0.311  Sum_probs=181.6

Q ss_pred             CCChHHHHHHHHHHHhhcCCcc--eEeeeeeEEEecCCC---------------C--C-----CCCCCCCCCCCCCCCcc
Q 020119          103 PTNKRHAAAKIFSHSDVVAEEP--WYGIEQEYTLLQKDV---------------K--W-----PLGWPIGGYPGPQGPYY  158 (331)
Q Consensus       103 ~~~pR~~Lk~~l~~l~~~G~~~--~~g~E~EF~l~~~~~---------------~--~-----~~g~~~~~~~~~~~~~~  158 (331)
                      +.|||++|||+++++++.|+.+  .+|+|+|||||+...               .  +     ..+...+..+...+.||
T Consensus         1 ~~dPR~iLkr~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (368)
T d1f52a2           1 DRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYF   80 (368)
T ss_dssp             TTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGGGCCCTTCCCCCCCCTTCCSS
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCceEEEeceEEEEEeccccccCcCCCccccCCccccccCCCcccCCCCCCccccCCcee
Confidence            4699999999999999999965  559999999996411               0  0     00000111234556778


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHcCceeeeecCCCC-chH-------------------------HHHHHcCCeeeeccc
Q 020119          159 CGVGADKAWGRDIVDSHYKACLYAGINISGINGEVM-PGQ-------------------------RITEIAGVVLSFDPK  212 (331)
Q Consensus       159 ~~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~g-pGQ-------------------------~vA~~~Gl~aTFmpK  212 (331)
                      +....+.  ..+++.+|.+.|+.+||+||++|+|+| |||                         +||++||+.||||||
T Consensus        81 ~~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~~~E~~~~gq~Ei~~~~~~~l~aAD~~~~~k~~ik~iA~~~Gl~atFmpK  158 (368)
T d1f52a2          81 PVPPVDS--AQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPK  158 (368)
T ss_dssp             BCTTSSC--CHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCSC
T ss_pred             eeeccch--HHHHHHHHHHHHHhhccCeeeeecccccCCceeecCCCCchHHHHHHHHHHHHHHHHHHHHhcceeeEecc
Confidence            8777665  467888888899999999999999999 688                         999999999999999


Q ss_pred             ccCCCCCCceeeeeeccccccc----CC---C-hHHHHHHHHHHHHHHHHHhhcccc---cccccCCCCCCCCCCCceee
Q 020119          213 PIQGDWNGAGAHANYSTKSMRN----DG---G-FEVIKKAIEKLGLRHSEHIAAYGE---GNERRLTGKHETADINTFKW  281 (331)
Q Consensus       213 P~~~d~~GsG~H~H~Sl~~~~~----~~---g-~n~~~~~i~gl~L~h~~al~a~~~---NSYkRl~p~~~ap~~~~~~W  281 (331)
                      |+.+ .+|||+|+|+|||+...    .+   + ..++++||+|| |+|+++++||++   ||||||+|++|||  ++++|
T Consensus       159 P~~~-~~GsG~HiH~Sl~~~~~n~~~~~~~~~lS~~~~~fiaGl-l~~~~~~~al~~PtvNSYkRl~~~~~aP--~~~~W  234 (368)
T d1f52a2         159 PMFG-DNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGV-IKHAKAINALANPTTNSYKRLVPGYEAP--VMLAY  234 (368)
T ss_dssp             SSTT-SCCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHH-HHTHHHHHHHHSCSGGGGGTSSSCSSCC--CEEEE
T ss_pred             cCCC-CCCcceeEEEEeccCCCcccccccccccCHHHHHHHHHH-HHhhHHHHHHHCCCchHHhhccCCCcCC--ceeee
Confidence            9995 89999999999997310    01   1 12456899999 999999999987   9999999999999  99999


Q ss_pred             ccCCCcceeEecccCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 020119          282 GVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW  329 (331)
Q Consensus       282 G~~NR~a~iRvp~~~~~~~~~riE~R~~da~aNPYLalAailaAgl~g  329 (331)
                      |.+||+++||||... +++.+|||+|++|++|||||++||+|+|||+|
T Consensus       235 g~~NR~a~iRi~~~~-~~~~~riE~R~~da~aNPYL~lAa~laagl~G  281 (368)
T d1f52a2         235 SARNRSASIRIPVVA-SPKARRIEVRFPDPAANPYLCFAALLMAGLDG  281 (368)
T ss_dssp             ESSCTTEEEECCCCS-CGGGCCEEECCCCTTSCHHHHHHHHHHHHHHH
T ss_pred             ccCccccceeecccC-CCccceEEecCCCccHHHHHHHHHHHHHhhhh
Confidence            999999999999632 22456999999999999999999999999998

PyMOL of d1f52a2

>d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure