Citrus Sinensis ID: 020144

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Protein Sequence
MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNT
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEEEcHHHHHHHHHHHHHHHHHHHcHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEccHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccHHHHccc
Coil and Loop (DISEMBL)
mdgqiriserDERVICYIVNSAEYCHKTSGDLAESVSKIIDsqladgvdmsEVQDEFSAVITKALVTLVLGLEtkfdnemagmtrvpwgslesvgdqseyvngINMILTssipvlgsllspiYFQFFLDKLAsslgprfyanifkckhisETGAQQMLLDTQAVKTILldipslgrqtsnaaSYTKFVSREMSKAEALLKVILSPVDSVADTYRallpegtpmEFQRILELKGLKKADQQTILDdfnkhgpgttqptiapsvvpaappappssvipnsasagfitSREDVLTRAAALGRGAATTGFKRFLALTEAAkdrkdgpfrklfnt
Flexible Loop (DISEMBL)
mdgqiriserdeRVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLdipslgrqtsnAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRGAATTGFKRFLALTeaakdrkdgpfrklfnt
Low Complexity Region (SEG)
MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGPGTTQPTIapsvvpaappappssvipnsasaGFITSREDVltraaalgrgaattgFKRFLALTEAAKDRKDGPFRKLFNT
Disordered region (IsUnstruct)
***********ERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLK************************************************IT*REDVLTRAAALGRGAATTGFKRFLALT*****************
Disordered Region (DISOPRED)
****IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDI*************TKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF*****************************************************************************FRKLFN*
Disordered Region (DISEMBL)
MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNT
Disordered Region (DISPRO)
***QIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGP**************************************************ATTGFKRFLALTEAAKDRKDGPFRKLFNT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	330	2.2.26 [Sep-21-2011]
Q8CCB4	832	Vacuolar protein sorting-	yes	no	0.778	0.308	0.359	1e-44
Q5ZLD7	831	Vacuolar protein sorting-	yes	no	0.724	0.287	0.365	2e-43
P34561	798	Vacuolar protein sorting-	yes	no	0.745	0.308	0.312	4e-34
Q5VIR6	699	Vacuolar protein sorting-	no	no	0.436	0.206	0.342	7e-21
Q5R5J4	699	Vacuolar protein sorting-	yes	no	0.436	0.206	0.342	7e-21
P87129	756	Vacuolar protein sorting-	yes	no	0.706	0.308	0.297	8e-20

>sp|Q8CCB4|VPS53_MOUSE Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus GN=Vps53 PE=2 SV=1

 Score =  180 bits (457), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 158/264 (59%), Gaps = 7/264 (2%)

Query: 14  VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
           +IC I+++AEYC  T+  L E + + +D  L + ++++   D FS VI+ ++  LV  L+
Sbjct: 551 LICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLD 610

Query: 74  TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
              D  +  M+++PW ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct: 611 AACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670

Query: 132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNA--ASYTKFVS 189
           A+S  P+F  ++FKCK IS  GA+Q+LLDT ++K +LLD+PS+G Q      ASYTK V 
Sbjct: 671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730

Query: 190 REMSKAEALLKVILSPVDSV---ADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
           + M++AE +LKV+++P + +    D Y  LL +     FQ+IL++KGLK+++Q ++L+  
Sbjct: 731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKRSEQSSMLELL 790

Query: 247 NKHGPGTTQPTIAPSVVPAAPPAP 270
            +  P     T   S +    P P
Sbjct: 791 RQRLPAPPSGTEGSSTLSLIAPTP 814

May be involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD.
Mus musculus (taxid: 10090)

>sp|Q5ZLD7|VPS53_CHICK Vacuolar protein sorting-associated protein 53 homolog OS=Gallus gallus GN=VPS53 PE=2 SV=1

 Score =  176 bits (445), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 154/246 (62%), Gaps = 7/246 (2%)

Query: 14  VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
           +IC I+++AEYC  T+  L E + + +D+ L + ++++   D FS VI+ ++  LV  L+
Sbjct: 550 LICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNSIQLLVQDLD 609

Query: 74  TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
              D  +  M+++ W ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct: 610 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 669

Query: 132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNA--ASYTKFVS 189
           A+S  P+F  ++FKCK IS  GA+Q+LLDT ++K +LLD+PS+G Q      ASYT+ V 
Sbjct: 670 ANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTRIVV 729

Query: 190 REMSKAEALLKVILSPVDS---VADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
           + M++AE +LKV+++P +      D Y  LL + +   FQ+IL++KGLK+++Q ++L+ F
Sbjct: 730 KGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRSEQSSMLELF 789

Query: 247 NKHGPG 252
            +  P 
Sbjct: 790 RQRLPA 795

May be involved in retrograde transport of early and late endosomes to the late Golgi.

Gallus gallus (taxid: 9031)

>sp|P34561|VPS53_CAEEL Vacuolar protein sorting-associated protein 53 homolog OS=Caenorhabditis elegans GN=vps-53 PE=3 SV=3

 Score =  145 bits (366), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 150/259 (57%), Gaps = 13/259 (5%)

Query: 6   RISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKAL 65
           R++   + ++C I+ +A++C +TS  L E +S+ I      GVD+S+  + F ++  ++L
Sbjct: 483 RLTPDQQFLVCCILATADWCAETSIQLQEKLSQRIP-----GVDISQETEAFYSITNQSL 537

Query: 66  VTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSP--IY 123
             LV  +E+  D  +  +++V W +++ VGD+S ++  +   L  ++P++  +LS    Y
Sbjct: 538 QVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHLRQAVPLIRDMLSDRRKY 597

Query: 124 FQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNA-- 181
           F  F  KLA+ L  +F  ++F+C+ IS  GA+Q+LL+T ++KT LL +PS+    ++   
Sbjct: 598 FAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKTFLLSVPSIDSIINSKPP 657

Query: 182 ASYTKFVSREMSKAEALLKVI---LSPVDSVADTYRALLPEGTPMEFQRILELKGLKKAD 238
            +Y   V+  ++KAE +LKV+   L  VD   + Y  LLP     E Q++LE+KG+K+ +
Sbjct: 658 TAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASDAAEMQKVLEMKGVKRQE 717

Query: 239 QQTILDDFN-KHGPGTTQP 256
              +L+ +  K G   + P
Sbjct: 718 HSAVLNAYRLKIGASGSDP 736

May be involved in retrograde transport of early and late endosomes to the late Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q5VIR6|VPS53_HUMAN Vacuolar protein sorting-associated protein 53 homolog OS=Homo sapiens GN=VPS53 PE=1 SV=1

 Score =  101 bits (252), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 87/146 (59%), Gaps = 2/146 (1%)

Query: 14  VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
           +IC I+++AEYC  T+  L E + + +D  L + ++++   D FS VI+ ++  LV  L+
Sbjct: 551 LICNILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLD 610

Query: 74  TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
              D  +  M+++ W ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct: 611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCVKF 670

Query: 132 ASSLGPRFYANIFKCKHISETGAQQM 157
           A+S  P+F  ++FKCK IS  GA+Q+
Sbjct: 671 ANSFIPKFITHLFKCKPISMVGAEQV 696

May be involved in retrograde transport of early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD.

Homo sapiens (taxid: 9606)

>sp|Q5R5J4|VPS53_PONAB Vacuolar protein sorting-associated protein 53 homolog OS=Pongo abelii GN=VPS53 PE=2 SV=1

 Score =  101 bits (252), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 87/146 (59%), Gaps = 2/146 (1%)

Query: 14  VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
           +IC I+++AEYC  T+  L E + + +D  L + ++++   D FS VI+ ++  LV  L+
Sbjct: 551 LICSILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLD 610

Query: 74  TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
              D  +  M+++ W ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct: 611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670

Query: 132 ASSLGPRFYANIFKCKHISETGAQQM 157
           A+S  P+F  ++FKCK IS  GA+Q+
Sbjct: 671 ANSFIPKFITHLFKCKPISMVGAEQV 696

May be involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD.

Pongo abelii (taxid: 9601)

>sp|P87129|VPS53_SCHPO Vacuolar protein sorting-associated protein 53 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps53 PE=1 SV=1

 Score = 98.2 bits (243), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 12/245 (4%)

Query: 19  VNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDN 78
           +N+AEY ++T+ +L +   +I + +  D +  SEV +    VI+ +  TL+     KF+N
Sbjct: 464 LNTAEYIYRTTIELEKRFQEISNKEFKDKMSFSEVLE----VISSSRGTLLKFATGKFEN 519

Query: 79  ----EMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS-PIYFQFFLDKLAS 133
               ++  ++++   ++E+VGDQS YV G    +T+      S++   ++ + F D+   
Sbjct: 520 VLNSDLEPLSKMDLKNIETVGDQSSYVGGAVQNMTAKASEFLSVVDLNMFARNFCDRSCE 579

Query: 134 SLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMS 193
           S   +F   I+  K ISE GA+Q+LLD  + K  LL +P L +  S   SY   ++  M 
Sbjct: 580 SFTRQFLNAIYLAKPISEVGAEQLLLDLYSFKNALLKLPDLKQDYSITDSYINHLTIFMG 639

Query: 194 KAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHG 250
             E +LK +L+P    A    +Y  L+ + +   F  +LELKG+ K+D  + L  F+   
Sbjct: 640 YIETVLKTLLTPASPKAGFIQSYIFLVKDRSVTNFTVLLELKGVGKSDISSFLQQFSDFV 699

Query: 251 PGTTQ 255
             T Q
Sbjct: 700 KKTPQ 704

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	330
225443241	826	PREDICTED: vacuolar protein sorting-asso	0.996	0.398	0.855	1e-158
449463607	823	PREDICTED: vacuolar protein sorting-asso	0.996	0.399	0.863	1e-156
255583561	816	Vacuolar protein sorting protein, putati	0.981	0.397	0.857	1e-154
356532932	820	PREDICTED: vacuolar protein sorting-asso	0.990	0.398	0.863	1e-154
356532934	837	PREDICTED: vacuolar protein sorting-asso	0.990	0.390	0.863	1e-154
356555817	837	PREDICTED: vacuolar protein sorting-asso	0.990	0.390	0.860	1e-152
356555815	820	PREDICTED: vacuolar protein sorting-asso	0.990	0.398	0.860	1e-152
357448261	851	Vacuolar protein sorting-associated prot	0.987	0.383	0.829	1e-150
145336587	828	heat intolerant 1 protein [Arabidopsis t	0.996	0.397	0.812	1e-149
334183201	847	heat intolerant 1 protein [Arabidopsis t	0.996	0.388	0.812	1e-149

>gi|225443241|ref|XP_002271570.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog [Vitis vinifera] gi|298204761|emb|CBI25259.3| unnamed protein product [Vitis vinifera]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 285/333 (85%), Positives = 303/333 (90%), Gaps = 4/333 (1%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MDGQI+ S+RDERVICYIVN+AEYCHKTSG+LAE+VSKIIDSQL+D VDMSEVQDEFSAV
Sbjct: 493 MDGQIKTSDRDERVICYIVNTAEYCHKTSGELAENVSKIIDSQLSDAVDMSEVQDEFSAV 552

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           ITKAL+TLV GLETKFD EMA MTRVPWG+LESVGDQSEYVN IN+ILTSSIP LGSLLS
Sbjct: 553 ITKALITLVHGLETKFDAEMAAMTRVPWGTLESVGDQSEYVNAINLILTSSIPALGSLLS 612

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           PIYFQFFLDKLASSLGPRFY NIFKCK ISETGAQQMLLDTQAVKTILL+IPSLGRQTS 
Sbjct: 613 PIYFQFFLDKLASSLGPRFYLNIFKCKQISETGAQQMLLDTQAVKTILLEIPSLGRQTSG 672

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASY+KFVSREMSKAEALLKVILSPVDSVA+TYRALLPEGTP+EFQRILELKGLKKADQQ
Sbjct: 673 AASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQRILELKGLKKADQQ 732

Query: 241 TILDDFNKHGPGTTQPTIAPSVV----PAAPPAPPSSVIPNSASAGFITSREDVLTRAAA 296
           +ILDDFNK G G TQP+I  + V    P AP AP +  + N AS G I SREDVLTRAAA
Sbjct: 733 SILDDFNKRGSGITQPSITATPVVQATPTAPVAPAALTVANPASVGVIASREDVLTRAAA 792

Query: 297 LGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           LGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN
Sbjct: 793 LGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 825

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463607|ref|XP_004149523.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog [Cucumis sativus] gi|449505810|ref|XP_004162574.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog [Cucumis sativus]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 285/330 (86%), Positives = 302/330 (91%), Gaps = 1/330 (0%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MDGQI+ S++DE+VICYIVNSAEYCHKTSG+LAESV KIIDSQL DGVDMSEVQDEFSAV
Sbjct: 493 MDGQIKTSDKDEKVICYIVNSAEYCHKTSGELAESVQKIIDSQLVDGVDMSEVQDEFSAV 552

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           ITKALVTLV GLETKFD+EMA MTRVPWG+LESVGDQSEYVNGINMILT+SIPVLG LLS
Sbjct: 553 ITKALVTLVHGLETKFDSEMAAMTRVPWGTLESVGDQSEYVNGINMILTTSIPVLGRLLS 612

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           P+YFQFFLDKLASSLGPRFYANIFKCK ISETGAQQMLLDTQAVKTILLDIPSLGRQTS 
Sbjct: 613 PLYFQFFLDKLASSLGPRFYANIFKCKQISETGAQQMLLDTQAVKTILLDIPSLGRQTSG 672

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASY+KFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKG KKADQQ
Sbjct: 673 AASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGFKKADQQ 732

Query: 241 TILDDFNKHGPGTTQ-PTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGR 299
           +ILDDFNKHGPG TQ    +PS  P     PP+  I + ++ G + SREDVLTRAAALGR
Sbjct: 733 SILDDFNKHGPGITQPSVSSPSAPPVVSSTPPAPTITSPSTVGLMASREDVLTRAAALGR 792

Query: 300 GAATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           GAATTGFKRFLALTEAAKDRKDGPFRKLFN
Sbjct: 793 GAATTGFKRFLALTEAAKDRKDGPFRKLFN 822

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583561|ref|XP_002532537.1| Vacuolar protein sorting protein, putative [Ricinus communis] gi|223527749|gb|EEF29853.1| Vacuolar protein sorting protein, putative [Ricinus communis]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/329 (85%), Positives = 300/329 (91%), Gaps = 5/329 (1%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MD QI++S+RDERVICYIVNSAEYC KTSG+LAESVSKIID  LA GVDMS V++EFS +
Sbjct: 492 MDVQIKMSDRDERVICYIVNSAEYCRKTSGELAESVSKIIDPHLAAGVDMSAVEEEFSGL 551

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           IT+AL+TLV GLETKFD EMA MTRVPWG+LESVGDQSEYVN INMILTSS PVLGSLLS
Sbjct: 552 ITEALMTLVHGLETKFDAEMAAMTRVPWGTLESVGDQSEYVNSINMILTSSTPVLGSLLS 611

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           P++FQ+FLDKLASSLGPRFY NIFKCK ISETGAQQMLLDTQAVKTILL+IPSLGRQTS+
Sbjct: 612 PVHFQYFLDKLASSLGPRFYTNIFKCKQISETGAQQMLLDTQAVKTILLEIPSLGRQTSS 671

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASY+KFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ
Sbjct: 672 AASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 731

Query: 241 TILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRG 300
           +ILDDFNKHGP  TQP+IA SV P AP A     I N AS GFI SREDVLTRAAALGRG
Sbjct: 732 SILDDFNKHGPAITQPSIASSVGPTAPAA----AITN-ASLGFIASREDVLTRAAALGRG 786

Query: 301 AATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           AATTGFKRFLALTEAAKDRKDGPFRKLFN
Sbjct: 787 AATTGFKRFLALTEAAKDRKDGPFRKLFN 815

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532932|ref|XP_003535023.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog isoform 1 [Glycine max]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 284/329 (86%), Positives = 302/329 (91%), Gaps = 2/329 (0%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MDGQI+ S+RDERVICYIVNSAEYCHKT+G+LAESVSKIID Q +DGVDMSEVQDEFSAV
Sbjct: 493 MDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDPQYSDGVDMSEVQDEFSAV 552

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           ITK+LVTLV GLETKFD EMA MTRVPWG+LESVGDQSEYVN IN+ILT SIP LGSLLS
Sbjct: 553 ITKSLVTLVHGLETKFDMEMAAMTRVPWGTLESVGDQSEYVNAINLILTISIPALGSLLS 612

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           P+YFQFFLDKLASSLGPRFY+NIFKCK ISETGAQQMLLDTQAVKTILL++PSLGRQTS 
Sbjct: 613 PVYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKTILLEVPSLGRQTSG 672

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASY+KFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ
Sbjct: 673 AASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 732

Query: 241 TILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRG 300
           +ILDDFNKHGPG  Q  IAPS+VPAA P  P     + ++ G I SREDVLTRAAALGRG
Sbjct: 733 SILDDFNKHGPGIKQTQIAPSIVPAAAPVAPVVP--SPSAIGLIASREDVLTRAAALGRG 790

Query: 301 AATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           AATTGFKRFLALTEAAKDRKDGPFRKLFN
Sbjct: 791 AATTGFKRFLALTEAAKDRKDGPFRKLFN 819

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532934|ref|XP_003535024.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog isoform 2 [Glycine max]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 284/329 (86%), Positives = 302/329 (91%), Gaps = 2/329 (0%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MDGQI+ S+RDERVICYIVNSAEYCHKT+G+LAESVSKIID Q +DGVDMSEVQDEFSAV
Sbjct: 510 MDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDPQYSDGVDMSEVQDEFSAV 569

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           ITK+LVTLV GLETKFD EMA MTRVPWG+LESVGDQSEYVN IN+ILT SIP LGSLLS
Sbjct: 570 ITKSLVTLVHGLETKFDMEMAAMTRVPWGTLESVGDQSEYVNAINLILTISIPALGSLLS 629

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           P+YFQFFLDKLASSLGPRFY+NIFKCK ISETGAQQMLLDTQAVKTILL++PSLGRQTS 
Sbjct: 630 PVYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKTILLEVPSLGRQTSG 689

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASY+KFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ
Sbjct: 690 AASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 749

Query: 241 TILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRG 300
           +ILDDFNKHGPG  Q  IAPS+VPAA P  P     + ++ G I SREDVLTRAAALGRG
Sbjct: 750 SILDDFNKHGPGIKQTQIAPSIVPAAAPVAPVVP--SPSAIGLIASREDVLTRAAALGRG 807

Query: 301 AATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           AATTGFKRFLALTEAAKDRKDGPFRKLFN
Sbjct: 808 AATTGFKRFLALTEAAKDRKDGPFRKLFN 836

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555817|ref|XP_003546226.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog isoform 2 [Glycine max]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/329 (86%), Positives = 300/329 (91%), Gaps = 2/329 (0%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MDGQI+ S+RDERVICYIVNSAEYCHKT+G+LAESVSKIID Q +D VDMSEVQDEFSAV
Sbjct: 510 MDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDPQYSDRVDMSEVQDEFSAV 569

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           ITK+LVTLV GLETKFD EMA MTRVPWGSLESVGDQSEYVN IN+ILT+SIP LGSLLS
Sbjct: 570 ITKSLVTLVHGLETKFDMEMAAMTRVPWGSLESVGDQSEYVNAINLILTTSIPALGSLLS 629

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           P+YFQFFLDKLASSLGPRFY+NIFKCK ISETGAQQMLLDTQAVKTILL++PSLGRQTS 
Sbjct: 630 PVYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKTILLEVPSLGRQTSG 689

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ
Sbjct: 690 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 749

Query: 241 TILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRG 300
           +ILDDFNKHGP   Q  IAPS+VPAAPP  P     + ++ G I SREDVLTRAAALGRG
Sbjct: 750 SILDDFNKHGPEIKQTQIAPSIVPAAPPVAPVVP--SPSAIGLIASREDVLTRAAALGRG 807

Query: 301 AATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           AATTGFKRFLALTEAAKDRK GPFR LFN
Sbjct: 808 AATTGFKRFLALTEAAKDRKAGPFRNLFN 836

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555815|ref|XP_003546225.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog isoform 1 [Glycine max]

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/329 (86%), Positives = 300/329 (91%), Gaps = 2/329 (0%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MDGQI+ S+RDERVICYIVNSAEYCHKT+G+LAESVSKIID Q +D VDMSEVQDEFSAV
Sbjct: 493 MDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDPQYSDRVDMSEVQDEFSAV 552

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           ITK+LVTLV GLETKFD EMA MTRVPWGSLESVGDQSEYVN IN+ILT+SIP LGSLLS
Sbjct: 553 ITKSLVTLVHGLETKFDMEMAAMTRVPWGSLESVGDQSEYVNAINLILTTSIPALGSLLS 612

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           P+YFQFFLDKLASSLGPRFY+NIFKCK ISETGAQQMLLDTQAVKTILL++PSLGRQTS 
Sbjct: 613 PVYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKTILLEVPSLGRQTSG 672

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ
Sbjct: 673 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 732

Query: 241 TILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRG 300
           +ILDDFNKHGP   Q  IAPS+VPAAPP  P     + ++ G I SREDVLTRAAALGRG
Sbjct: 733 SILDDFNKHGPEIKQTQIAPSIVPAAPPVAPVVP--SPSAIGLIASREDVLTRAAALGRG 790

Query: 301 AATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           AATTGFKRFLALTEAAKDRK GPFR LFN
Sbjct: 791 AATTGFKRFLALTEAAKDRKAGPFRNLFN 819

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448261|ref|XP_003594406.1| Vacuolar protein sorting-associated protein-like protein [Medicago truncatula] gi|355483454|gb|AES64657.1| Vacuolar protein sorting-associated protein-like protein [Medicago truncatula]

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 278/335 (82%), Positives = 299/335 (89%), Gaps = 9/335 (2%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQ------ 54
           MDGQI+ S+RDERVICYIVNSAEYCHKT+G+LAESVSKIID Q ADGVDMSEVQ      
Sbjct: 519 MDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDHQFADGVDMSEVQRYAIMQ 578

Query: 55  DEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPV 114
           DEFSAVIT++LVTLV GLETKFD EMA MTRVPWG+LESVGDQSEYVN IN+ILT+SIP 
Sbjct: 579 DEFSAVITRSLVTLVHGLETKFDIEMAAMTRVPWGTLESVGDQSEYVNAINLILTTSIPT 638

Query: 115 LGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSL 174
           LGSLLSP+YFQFFLDKLASSLGPRFY+NIFKCK ISETGAQQMLLDTQAVK++LL+IPSL
Sbjct: 639 LGSLLSPVYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKSMLLEIPSL 698

Query: 175 GRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGL 234
           GRQTS+A SY+KFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGL
Sbjct: 699 GRQTSSATSYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGL 758

Query: 235 KKADQQTILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRA 294
           KKADQQ+ILDDFNKHGPG  Q  I P++ PA P AP         + G + SREDVLTRA
Sbjct: 759 KKADQQSILDDFNKHGPGIKQTQITPAIAPAPPVAPVVPS---PTAVGLVASREDVLTRA 815

Query: 295 AALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           AALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN
Sbjct: 816 AALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 850

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145336587|ref|NP_564573.3| heat intolerant 1 protein [Arabidopsis thaliana] gi|110737402|dbj|BAF00645.1| hypothetical protein [Arabidopsis thaliana] gi|332194436|gb|AEE32557.1| heat intolerant 1 protein [Arabidopsis thaliana]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/331 (81%), Positives = 298/331 (90%), Gaps = 2/331 (0%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MDGQI++SERDERVICYIVNSAEYCHKTSG+LAE+VS+IID   ADGVDMSEVQDEFSAV
Sbjct: 497 MDGQIKVSERDERVICYIVNSAEYCHKTSGELAENVSEIIDPHYADGVDMSEVQDEFSAV 556

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           ITKALVTLVLGLETKFD EMA MTRVPW +LESVGDQS YVNGIN +L+ SIPVLG LL+
Sbjct: 557 ITKALVTLVLGLETKFDTEMAVMTRVPWSTLESVGDQSGYVNGINTVLSGSIPVLGKLLT 616

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           P+YFQFFLDKLASSLGPRFYANIF+CK +SETGAQQMLLDTQAVK+ILL+IPSL RQTS 
Sbjct: 617 PVYFQFFLDKLASSLGPRFYANIFRCKQLSETGAQQMLLDTQAVKSILLEIPSLARQTST 676

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASY+KFVSREMS+AEALLKVILSP+DSVADTYRAL PEGTPMEFQRILELKGLKKADQQ
Sbjct: 677 AASYSKFVSREMSRAEALLKVILSPIDSVADTYRALFPEGTPMEFQRILELKGLKKADQQ 736

Query: 241 TILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSV-IPNSAS-AGFITSREDVLTRAAALG 298
           +ILDDFNKHGPG TQ ++A ++    P  P   + I N A+ AGFI + EDVLTRAAALG
Sbjct: 737 SILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAGFIANSEDVLTRAAALG 796

Query: 299 RGAATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           RGAA+TGFK+F+ALTEAAKDRKDGP R+LFN
Sbjct: 797 RGAASTGFKKFIALTEAAKDRKDGPLRRLFN 827

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334183201|ref|NP_001185188.1| heat intolerant 1 protein [Arabidopsis thaliana] gi|332194437|gb|AEE32558.1| heat intolerant 1 protein [Arabidopsis thaliana]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/331 (81%), Positives = 298/331 (90%), Gaps = 2/331 (0%)

Query: 1   MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV 60
           MDGQI++SERDERVICYIVNSAEYCHKTSG+LAE+VS+IID   ADGVDMSEVQDEFSAV
Sbjct: 516 MDGQIKVSERDERVICYIVNSAEYCHKTSGELAENVSEIIDPHYADGVDMSEVQDEFSAV 575

Query: 61  ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS 120
           ITKALVTLVLGLETKFD EMA MTRVPW +LESVGDQS YVNGIN +L+ SIPVLG LL+
Sbjct: 576 ITKALVTLVLGLETKFDTEMAVMTRVPWSTLESVGDQSGYVNGINTVLSGSIPVLGKLLT 635

Query: 121 PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN 180
           P+YFQFFLDKLASSLGPRFYANIF+CK +SETGAQQMLLDTQAVK+ILL+IPSL RQTS 
Sbjct: 636 PVYFQFFLDKLASSLGPRFYANIFRCKQLSETGAQQMLLDTQAVKSILLEIPSLARQTST 695

Query: 181 AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ 240
           AASY+KFVSREMS+AEALLKVILSP+DSVADTYRAL PEGTPMEFQRILELKGLKKADQQ
Sbjct: 696 AASYSKFVSREMSRAEALLKVILSPIDSVADTYRALFPEGTPMEFQRILELKGLKKADQQ 755

Query: 241 TILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSV-IPNSAS-AGFITSREDVLTRAAALG 298
           +ILDDFNKHGPG TQ ++A ++    P  P   + I N A+ AGFI + EDVLTRAAALG
Sbjct: 756 SILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAGFIANSEDVLTRAAALG 815

Query: 299 RGAATTGFKRFLALTEAAKDRKDGPFRKLFN 329
           RGAA+TGFK+F+ALTEAAKDRKDGP R+LFN
Sbjct: 816 RGAASTGFKKFIALTEAAKDRKDGPLRRLFN 846

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	330
DICTYBASE|DDB_G0285901	838	DDB_G0285901 "Vps53-like domai	0.709	0.279	0.411	2.2e-47
ZFIN|ZDB-GENE-041114-199	832	vps53 "vacuolar protein sortin	0.733	0.290	0.398	8.7e-44
MGI|MGI:1915549	832	Vps53 "vacuolar protein sortin	0.739	0.293	0.366	2.8e-42
UNIPROTKB|Q5ZLD7	831	VPS53 "Vacuolar protein sortin	0.721	0.286	0.367	3.4e-41
UNIPROTKB|E2R1D2	832	VPS53 "Uncharacterized protein	0.733	0.290	0.366	4.5e-41
UNIPROTKB|F1RHI3	832	VPS53 "Uncharacterized protein	0.733	0.290	0.374	1.2e-40
UNIPROTKB|E1BJW7	832	VPS53 "Uncharacterized protein	0.721	0.286	0.371	1.6e-40
WB|WBGene00011502	798	vps-53 [Caenorhabditis elegans	0.745	0.308	0.312	1.8e-32
UNIPROTKB|P34561	798	vps-53 "Vacuolar protein sorti	0.745	0.308	0.312	1.8e-32
TAIR|locus:2036396	569	AT1G50970 "AT1G50970" [Arabido	0.518	0.300	0.446	2.9e-29

DICTYBASE|DDB_G0285901 DDB_G0285901 "Vps53-like domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 502 (181.8 bits), Expect = 2.2e-47, P = 2.2e-47
 Identities = 97/236 (41%), Positives = 155/236 (65%)

Query:    10 RDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLV 69
             ++++ IC I+N+AE+C KTSG + +   KIID +  + +D+ ++Q++FS++I K +  LV
Sbjct:   582 QEDKTICLIINTAEFCRKTSGQMTDGFKKIIDEKYKESIDLKDIQNDFSSIIAKGVKALV 641

Query:    70 LGLETKFDNEMAGMTRVPWGS-LESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFL 128
              G+E K D  +  MTR+ WG   + VGD S YVN +  I++ S  +  + LSP +F++F 
Sbjct:   642 SGIEAKLDPHLQSMTRMEWGERYQYVGDNSPYVNEVVQIISDSSQLEVAWLSPEHFRYFC 701

Query:   129 DKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFV 188
             D  ASS G R   +I+KC+ ISE G+Q +LLD   +KT+LLD+P+  +   + + YTK +
Sbjct:   702 DLFASSFGLRIPQSIYKCRGISEIGSQGILLDITTIKTVLLDLPNKVKDGRSNSRYTKLL 761

Query:   189 SREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQ-QTIL 243
             ++E +KAE LLKVI    D + +T++ L P+ T  +FQ+I++LKG K  D+ QT L
Sbjct:   762 NKEFAKAENLLKVIGCSQDHLVETFKDLFPDSTNADFQKIMDLKGFKVGDKIQTEL 817

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-041114-199 vps53 "vacuolar protein sorting 53 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 469 (170.2 bits), Expect = 8.7e-44, P = 8.7e-44
 Identities = 100/251 (39%), Positives = 159/251 (63%)

Query:    14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
             +IC I+++AEYC  T+  L E + + +D  L + +++S   D FS VI+ ++  LV  L+
Sbjct:   550 LICSILSTAEYCLATTLQLEEKLKEKVDKSLMERINLSGEMDTFSTVISNSIQLLVQDLD 609

Query:    74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
                D  +  M+++PW S+E VGDQS YV  + M +  ++P++   L+    YF  F  K 
Sbjct:   610 AACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRKYFTQFCIKF 669

Query:   132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
              +S  P+F  ++F+CK IS  GA+Q+LLDT ++KT+LLD+PS+G Q    A  SYTK V 
Sbjct:   670 TNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAPASYTKIVV 729

Query:   190 REMSKAEALLKVILSPVD-SVA--DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
             + M++AE +LKV+++P + SV   D Y  LL +  P  FQ+IL++KGLK+++Q T+L+ F
Sbjct:   730 KGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRSEQSTMLELF 789

Query:   247 NKHGPGTTQPT 257
              +  P  T P+
Sbjct:   790 RQRLP--TPPS 798

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:1915549 Vps53 "vacuolar protein sorting 53 (yeast)" [Mus musculus (taxid:10090)]

 Score = 441 (160.3 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
 Identities = 92/251 (36%), Positives = 154/251 (61%)

Query:    14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
             +IC I+++AEYC  T+  L E + + +D  L + ++++   D FS VI+ ++  LV  L+
Sbjct:   551 LICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLD 610

Query:    74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
                D  +  M+++PW ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct:   611 AACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670

Query:   132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
             A+S  P+F  ++FKCK IS  GA+Q+LLDT ++K +LLD+PS+G Q    A  SYTK V 
Sbjct:   671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730

Query:   190 REMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
             + M++AE +LKV+++P + +    D Y  LL +     FQ+IL++KGLK+++Q ++L+  
Sbjct:   731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKRSEQSSMLELL 790

Query:   247 NKHGPGTTQPT 257
              +  P     T
Sbjct:   791 RQRLPAPPSGT 801

GO:0000938 "GARP complex" evidence=ISO

GO:0005768 "endosome" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q5ZLD7 VPS53 "Vacuolar protein sorting-associated protein 53 homolog" [Gallus gallus (taxid:9031)]

 Score = 433 (157.5 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
 Identities = 90/245 (36%), Positives = 154/245 (62%)

Query:    14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
             +IC I+++AEYC  T+  L E + + +D+ L + ++++   D FS VI+ ++  LV  L+
Sbjct:   550 LICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNSIQLLVQDLD 609

Query:    74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
                D  +  M+++ W ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct:   610 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 669

Query:   132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
             A+S  P+F  ++FKCK IS  GA+Q+LLDT ++K +LLD+PS+G Q    A  SYT+ V 
Sbjct:   670 ANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTRIVV 729

Query:   190 REMSKAEALLKVILSPVDS---VADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
             + M++AE +LKV+++P +      D Y  LL + +   FQ+IL++KGLK+++Q ++L+ F
Sbjct:   730 KGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRSEQSSMLELF 789

Query:   247 NKHGP 251
              +  P
Sbjct:   790 RQRLP 794

GO:0015031 "protein transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0010008 "endosome membrane" evidence=IEA

UNIPROTKB|E2R1D2 VPS53 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 432 (157.1 bits), Expect = 4.5e-41, Sum P(2) = 4.5e-41
 Identities = 92/251 (36%), Positives = 155/251 (61%)

Query:    14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
             +IC I+++AEYC  T+  L E + + +D  L + ++++   D FS VI+ ++  LV  L+
Sbjct:   551 LICGILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLD 610

Query:    74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
                D  +  M+++ W ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct:   611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670

Query:   132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
             A+S  P+F  ++FKCK IS  GA+Q+LLDT ++K +LLD+PS+G Q    A  SYTK V 
Sbjct:   671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730

Query:   190 REMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
             + M++AE +LKV+++P + +    D Y  LL +     FQ+IL++KGLK+++Q ++L+  
Sbjct:   731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKRSEQSSMLELL 790

Query:   247 NKHGPGTTQPT 257
              +  P  T P+
Sbjct:   791 RQRLP--TPPS 799

GO:0000938 "GARP complex" evidence=IEA

UNIPROTKB|F1RHI3 VPS53 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 440 (159.9 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 94/251 (37%), Positives = 155/251 (61%)

Query:    14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
             +IC I+++AEYC  T+  L E + + +D  L + +++S   D FS VI+ ++  LV  L+
Sbjct:   551 LICSILSTAEYCLATTQQLEEKLKEKVDVSLIERINLSGEMDTFSTVISSSIQLLVQDLD 610

Query:    74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
                D  +  M+++ W ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct:   611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670

Query:   132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
             A+S  P+F  ++FKCK IS  GA+Q+LLDT ++K +LLD+PS+G Q    A  SYTK V 
Sbjct:   671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730

Query:   190 REMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
             + M++AE +LKV+++P + +    D Y  LL +     FQ+IL++KGLK+++Q + L+ F
Sbjct:   731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKRSEQSSTLELF 790

Query:   247 NKHGPGTTQPT 257
              +  P  T P+
Sbjct:   791 RQRLP--TPPS 799

GO:0000938 "GARP complex" evidence=IEA

UNIPROTKB|E1BJW7 VPS53 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 439 (159.6 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 91/245 (37%), Positives = 153/245 (62%)

Query:    14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
             +IC I+++AEYC  T+  L E + + +D  L + ++++   D FS VI+ ++  LV  L+
Sbjct:   551 LICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLD 610

Query:    74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
                D  +  M+++ W ++E VGDQS YV  + + +  ++P++   L+    YF  F  K 
Sbjct:   611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670

Query:   132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
             A+S  P+F  ++FKCK IS  GA+Q+LLDT ++K +LLD+PS+G Q    A  SYTK V 
Sbjct:   671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730

Query:   190 REMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
             + M++AE +LKV+++P + +    D Y  LL +     FQ+IL++KGLK+++Q ++L+ F
Sbjct:   731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKRSEQSSMLELF 790

Query:   247 NKHGP 251
              +  P
Sbjct:   791 RQRLP 795

GO:0000938 "GARP complex" evidence=IEA

WB|WBGene00011502 vps-53 [Caenorhabditis elegans (taxid:6239)]

 Score = 364 (133.2 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 81/259 (31%), Positives = 149/259 (57%)

Query:     6 RISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKAL 65
             R++   + ++C I+ +A++C +TS  L E +S+ I      GVD+S+  + F ++  ++L
Sbjct:   483 RLTPDQQFLVCCILATADWCAETSIQLQEKLSQRIP-----GVDISQETEAFYSITNQSL 537

Query:    66 VTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--Y 123
               LV  +E+  D  +  +++V W +++ VGD+S ++  +   L  ++P++  +LS    Y
Sbjct:   538 QVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHLRQAVPLIRDMLSDRRKY 597

Query:   124 FQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGR--QTSNA 181
             F  F  KLA+ L  +F  ++F+C+ IS  GA+Q+LL+T ++KT LL +PS+     +   
Sbjct:   598 FAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKTFLLSVPSIDSIINSKPP 657

Query:   182 ASYTKFVSREMSKAEALLKVI---LSPVDSVADTYRALLPEGTPMEFQRILELKGLKKAD 238
              +Y   V+  ++KAE +LKV+   L  VD   + Y  LLP     E Q++LE+KG+K+ +
Sbjct:   658 TAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASDAAEMQKVLEMKGVKRQE 717

Query:   239 QQTILDDFN-KHGPGTTQP 256
                +L+ +  K G   + P
Sbjct:   718 HSAVLNAYRLKIGASGSDP 736

GO:0040015 "negative regulation of multicellular organism growth" evidence=IMP

GO:0000938 "GARP complex" evidence=IPI

UNIPROTKB|P34561 vps-53 "Vacuolar protein sorting-associated protein 53 homolog" [Caenorhabditis elegans (taxid:6239)]

 Score = 364 (133.2 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 81/259 (31%), Positives = 149/259 (57%)

Query:     6 RISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKAL 65
             R++   + ++C I+ +A++C +TS  L E +S+ I      GVD+S+  + F ++  ++L
Sbjct:   483 RLTPDQQFLVCCILATADWCAETSIQLQEKLSQRIP-----GVDISQETEAFYSITNQSL 537

Query:    66 VTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--Y 123
               LV  +E+  D  +  +++V W +++ VGD+S ++  +   L  ++P++  +LS    Y
Sbjct:   538 QVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHLRQAVPLIRDMLSDRRKY 597

Query:   124 FQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGR--QTSNA 181
             F  F  KLA+ L  +F  ++F+C+ IS  GA+Q+LL+T ++KT LL +PS+     +   
Sbjct:   598 FAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKTFLLSVPSIDSIINSKPP 657

Query:   182 ASYTKFVSREMSKAEALLKVI---LSPVDSVADTYRALLPEGTPMEFQRILELKGLKKAD 238
              +Y   V+  ++KAE +LKV+   L  VD   + Y  LLP     E Q++LE+KG+K+ +
Sbjct:   658 TAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASDAAEMQKVLEMKGVKRQE 717

Query:   239 QQTILDDFN-KHGPGTTQP 256
                +L+ +  K G   + P
Sbjct:   718 HSAVLNAYRLKIGASGSDP 736

GO:0005515 "protein binding" evidence=IPI

GO:0000938 "GARP complex" evidence=IDA

GO:0060378 "regulation of brood size" evidence=IMP

TAIR|locus:2036396 AT1G50970 "AT1G50970" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 2.9e-29, P = 2.9e-29
 Identities = 84/188 (44%), Positives = 100/188 (53%)

Query:   150 SETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--------SYTKFVSREMSKAEALLKV 201
             SE     MLLD   +K ILL +PSL RQ   +A        SY K V+ +M +AEA+LKV
Sbjct:   390 SENSVYLMLLDAHDMKMILLKVPSLARQPEASALLVKTATASYVKLVNHQMKRAEAVLKV 449

Query:   202 ILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGPGTTQPTIXXX 261
             I SP+ +V DTYRAL PE TPMEFQRIL LKGL KA+QQ+ILDDFN H    TQ ++   
Sbjct:   450 IASPIVTVIDTYRALFPEETPMEFQRILVLKGLTKAEQQSILDDFNNHSSRITQLSVAAK 509

Query:   262 XXXXXXXXXXXXXXXXXXXXGFITSREDVXXXXXXXXXXXXXXXFKRFLALTEAAKDRKD 321
                                  F  + E+V               F +  ALT AAKDR  
Sbjct:   510 TPEAHALPLALTNVAPAVR--FKANSEEVLTRAASAATTS----FMKLYALTGAAKDR-- 561

Query:   322 GPFRKLFN 329
              PFRKLFN
Sbjct:   562 -PFRKLFN 568

GO:0005215 "transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006810 "transport" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	330
pfam04437	483	pfam04437, RINT1_TIP1, RINT-1 / TIP-1 family	0.001

>gnl|CDD|218088 pfam04437, RINT1_TIP1, RINT-1 / TIP-1 family

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 37/172 (21%), Positives = 56/172 (32%), Gaps = 23/172 (13%)

Query: 16  CYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDE--FSAVI-----------T 62
           C  +N+A Y      D ++ V  + ++ L D  + +       F   I            
Sbjct: 248 CRKLNAANYLESKLKDWSDDVFFLQEASLGDIANRTSSSYGALFDETINSLERLRLDSEG 307

Query: 63  KALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQ------SEYVNGINMILTSSIPVLG 116
             +  LV G +    N     T   W SL S          +E V  +   L   I  L 
Sbjct: 308 SIVHRLVKGFKAALRNYFKIST---WSSLSSTSALESLSPSAELVEALR-YLRRRISKLE 363

Query: 117 SLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTIL 168
            LL    F     +L  SL     ++I      SE GA Q   D + +  + 
Sbjct: 364 RLLPLAIFLRIWRQLLLSLDTYIISSILMLNKFSEGGAAQFHFDMRNLFEVF 415

This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control, as well as the TIP-1 protein from yeast that seems to be involved in a complex with Sec20p that is required for golgi transport. Length = 483

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	330
KOG2180	793	consensus Late Golgi protein sorting complex, subu	100.0
PF06046	566	Sec6: Exocyst complex component Sec6; InterPro: IP	99.83
KOG2180	793	consensus Late Golgi protein sorting complex, subu	99.34
KOG2286	667	consensus Exocyst complex subunit SEC6 [Intracellu	99.13
PF04437	494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	99.1
PF04091	311	Sec15: Exocyst complex subunit Sec15-like ; InterP	98.92
COG5173	742	SEC6 Exocyst complex subunit SEC6 [Intracellular t	98.73
PF10474	234	DUF2451: Protein of unknown function C-terminus (D	98.13
KOG0412	773	consensus Golgi transport complex COD1 protein [In	97.42
PF07393	710	Sec10: Exocyst complex component Sec10; InterPro:	96.57
KOG2176	800	consensus Exocyst complex, subunit SEC15 [Intracel	95.97
PF10191	766	COG7: Golgi complex component 7 (COG7); InterPro:	95.29
KOG3691	982	consensus Exocyst complex subunit Sec8 [Intracellu	95.23
KOG2218	737	consensus ER to golgi transport protein/RAD50-inte	92.44
PF14923	450	CCDC142: Coiled-coil protein 142	91.7
PF12022	125	DUF3510: Domain of unknown function (DUF3510); Int	83.94
KOG2307	705	consensus Low density lipoprotein receptor [Intrac	81.67

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.3e-47  Score=390.62  Aligned_cols=246  Identities=36%  Similarity=0.606  Sum_probs=234.8

Q ss_pred             cCCccchhhhhhhcccHHHHHHHHHHHHHHHHHhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccC
Q 020144            6 RISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTR   85 (330)
Q Consensus         6 ~~s~e~~~~ic~IINTADYC~~Ti~qLeekl~e~id~~~ke~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~   85 (330)
                      +++.+++..+|++++||+||.+|+.|||++++|+++..|..+|||+.+.+.|+.+++.|++.+|..+++.|+|.+..|.+
T Consensus       488 ~~t~d~l~di~~~lst~e~~~~tt~qle~kl~e~~~~~~~~~vs~s~~r~~~~~~~~~s~q~lv~D~e~a~~~~lt~msk  567 (793)
T KOG2180|consen  488 RFTIDQLLDICCILSTAEYCLATTIQLEKKLKEIVDASYIKGVSFSEEREVFSSKISVSLQFLVQDLENALDPDLTPMSK  567 (793)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHHHHhhCcccChHHH
Confidence            67788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCCCcCccHHHHHHHHhhhHHHHhhhc--cHHHHHHHHHHHHHHHHHHHHHHhHhccCCChhhHhhHHhhHHH
Q 020144           86 VPWGSLESVGDQSEYVNGINMILTSSIPVLGSLL--SPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQA  163 (330)
Q Consensus        86 ~nW~~~e~VgD~S~YV~~i~~~L~~~~~~i~~~L--~~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis~~gaeQLLLD~~s  163 (330)
                      +.|.+++.|||||+|+.++..++.+.+|.|+.++  ++.||.+||++++..|+++|++.+|||+|++.+||||||+|+++
T Consensus       568 ~~~~~l~~vgDQss~v~s~~~h~~q~~~~i~~~~~~~r~~f~~fc~r~a~~f~~kf~~~l~R~k~~s~~g~EQLlldt~s  647 (793)
T KOG2180|consen  568 MQWQNLEGVGDQSSYVSSLNFHLSQFVPLIRDALALDRKYFAQFCVRLAASFIPKFLNVLFRAKPISVVGAEQLLLDTES  647 (793)
T ss_pred             HHHHHhcCccccchhhHHHHHHHHhhhHHHHHHhccccchHHHhhHHHHhhcchHHHHHHHHhhhHhhhHHHHHHHHHHH
Confidence            9999999999999999999999999999999987  68999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCC---chhHHHHHHhhCCCCCHHHHHHHHhhcCCCHHHHH
Q 020144          164 VKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSP---VDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ  240 (330)
Q Consensus       164 LK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP---~e~~v~~Y~~L~~d~S~~~FqkIL~LKGl~k~eq~  240 (330)
                      +|+.|+++|+....-..-..|.+||++.|+++|++|||||+|   ++.|+++|..|+||.+..+|++||+|||++|.|+.
T Consensus       648 lK~~ll~lp~~~s~~n~~~~y~~~~~~~m~~~e~iiK~lm~p~~~~~~f~e~yikL~~~~~~a~~~~vLelKgv~r~d~~  727 (793)
T KOG2180|consen  648 LKDALLTLPPLRSLFNDKRPYKRHVDNNMTQAEMIIKVLMTPLDPADDFYEQYIKLLPDPDSAEWQKVLELKGVKRDDAL  727 (793)
T ss_pred             HHHHhhcCCchhhhccccchHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHhcCCCcHHHHHHHHHhcCCcHHHHH
Confidence            999999999987654444449999999999999999999998   47999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCC
Q 020144          241 TILDDFNKHGP  251 (330)
Q Consensus       241 ~lle~f~~~~~  251 (330)
                      ..+..|+-...
T Consensus       728 ~~l~~~~~~~~  738 (793)
T KOG2180|consen  728 WKLLWFAYNLE  738 (793)
T ss_pred             HHHHHHHHhcc
Confidence            99999985543

>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex

Probab=99.83  E-value=1.2e-19  Score=186.70  Aligned_cols=221  Identities=17%  Similarity=0.297  Sum_probs=191.4

Q ss_pred             chhhhhhhcccHHHHHHHHHHHHHHHHHhhhhhccCCc--ccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCC
Q 020144           11 DERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGV--DMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPW   88 (330)
Q Consensus        11 ~~~~ic~IINTADYC~~Ti~qLeekl~e~id~~~ke~I--df~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW   88 (330)
                      -+.|+|.++|.+..|.+.+++++.++.+.+++.|.+++  +++...++|.++.+.|.+.|+..+..+++|+|+.++...|
T Consensus       314 ~~eyliA~~N~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~if~Dl~p~~~~Lft~~W  393 (566)
T PF06046_consen  314 YLEYLIAVANNCLRCRDYVESLEQKFEEKVSQKYMERISSDLEELMDGFDDLAKECCQYLLEEIFNDLKPHFKKLFTKKW  393 (566)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHCTHHHHCTTTSGGG
T ss_pred             hHHHHHHHhccHHHHHHHHHHHHHhcccccchHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCcCcC
Confidence            46889999999999999999999999999998888774  8999999999999999999999999999999999999999


Q ss_pred             CCCCcCCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHh----c--cCCChhhHhhHHhhHH
Q 020144           89 GSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFK----C--KHISETGAQQMLLDTQ  162 (330)
Q Consensus        89 ~~~e~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k----~--kpis~~gaeQLLLD~~  162 (330)
                      ..-       ..|.+|+.++.+|++.++.+|++.||..|++.+...++..|+.++++    |  +.....+|+||..|.+
T Consensus       394 ~~~-------~~~~~I~~Ti~dY~~d~~~~l~~~~~~~l~~~~~~~~v~~Yl~~l~~kk~~~~~~~~~~~~a~~i~~D~~  466 (566)
T PF06046_consen  394 YSG-------EAVDTICATIEDYLQDFQHYLRPPYFQELIEELHDRVVKEYLRALMKKKIKFKNKEERKEAAERIRRDAE  466 (566)
T ss_dssp             CTS--------HHHHHHHHHHHHHHHHCCCS-HHHHHHHHHHHHHHHHHHHHHGGGG---------CCCCCHHHHHHHHH
T ss_pred             cCc-------chHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhcccHHHHHHHHHHHHHHHH
Confidence            963       69999999999999999999999999999999999999999999977    3  2345669999999999


Q ss_pred             HHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHh-cCCchhHHHHHHhh---CCCCCHHHHHHHHhhcC-CCHH
Q 020144          163 AVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVI-LSPVDSVADTYRAL---LPEGTPMEFQRILELKG-LKKA  237 (330)
Q Consensus       163 sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL-~sP~e~~v~~Y~~L---~~d~S~~~FqkIL~LKG-l~k~  237 (330)
                      .++++|.++.+           ...+...+..|+.++.+| ..+++++...|..|   .||.+...+..||.+|| ++|+
T Consensus       467 ~l~~~F~~~~~-----------~~~~~~~~~~l~~l~~ll~~~d~~~i~l~~~~l~~~ypD~~~~~v~alL~~R~D~~r~  535 (566)
T PF06046_consen  467 QLKSFFSKLGS-----------KSEVKSSFDVLEDLLELLRLEDPEMIKLEVSSLLQKYPDISEEHVEALLALRGDLSRS  535 (566)
T ss_dssp             HHHHHHHHHTH-----------HHHHHHHHHHHHHHHHHH-HS-CCCHHHHHHHHHCC-TT--SHHHHHHHCT-TT--HH
T ss_pred             HHHHHHHHhcc-----------cccccchHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCHH
Confidence            99999999883           789999999999999999 77777775555555   57888899999999997 9999


Q ss_pred             HHHHHHHHHHhc
Q 020144          238 DQQTILDDFNKH  249 (330)
Q Consensus       238 eq~~lle~f~~~  249 (330)
                      +.+.+++..+..
T Consensus       536 ~~~~il~~~~~~  547 (566)
T PF06046_consen  536 EVKEILEILREI  547 (566)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999854

Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner [].; PDB: 2FJI_2.

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.34  E-value=8.6e-13  Score=136.52  Aligned_cols=233  Identities=24%  Similarity=0.172  Sum_probs=187.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCCCCCCcCCCcCccHH
Q 020144           23 EYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVN  102 (330)
Q Consensus        23 DYC~~Ti~qLeekl~e~id~~~ke~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW~~~e~VgD~S~YV~  102 (330)
                      .+|.....+|-+.-    ||-|...+.|+.-.++|...|-.+.                    .+|...+++|       
T Consensus       424 kkcltq~~~Ls~n~----dpl~~~~~~f~k~LreYa~kil~~~--------------------lP~~t~~s~g-------  472 (793)
T KOG2180|consen  424 KKCLTQCSELSENN----DPLIALLAVFSKWLREYAQKILLGN--------------------LPDTTSSSDG-------  472 (793)
T ss_pred             HHHHHHHHHhccCC----chHHHHHHHHHHHHHHHHHHHhhcc--------------------CCcccccccC-------
Confidence            49999999998776    7777778888888888887665553                    8898877776       


Q ss_pred             HHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhccCCChhhHhhHHhhHHHHHHHHhhCCCCCCCC----
Q 020144          103 GINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQT----  178 (330)
Q Consensus       103 ~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis~~gaeQLLLD~~sLK~~Ll~LP~~~~~~----  178 (330)
                                       ...|+..+.                 |.--..-++.++|+|+..++++....|...-+.    
T Consensus       473 -----------------~~v~~l~~~-----------------e~~~~~~~t~d~l~di~~~lst~e~~~~tt~qle~kl  518 (793)
T KOG2180|consen  473 -----------------AAVYLLLRI-----------------EGAEYCRFTIDQLLDICCILSTAEYCLATTIQLEKKL  518 (793)
T ss_pred             -----------------chhhhHHHh-----------------hhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                             122332221                 333444466689999999999998888764322    


Q ss_pred             --CCchhhHHHHHHhHHHHHHHhhHhcCCchhHHHHHHhhCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCC
Q 020144          179 --SNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGPGTTQP  256 (330)
Q Consensus       179 --~~~~sY~k~V~~~~~klE~lLKvL~sP~e~~v~~Y~~L~~d~S~~~FqkIL~LKGl~k~eq~~lle~f~~~~~~~~~~  256 (330)
                        ...++|.+.|+-.+.+.+...++..+|.....+.|..+.|+.++..++++..++|+.  ||+.++..+..|..+....
T Consensus       519 ~e~~~~~~~~~vs~s~~r~~~~~~~~~s~q~lv~D~e~a~~~~lt~msk~~~~~l~~vg--DQss~v~s~~~h~~q~~~~  596 (793)
T KOG2180|consen  519 KEIVDASYIKGVSFSEEREVFSSKISVSLQFLVQDLENALDPDLTPMSKMQWQNLEGVG--DQSSYVSSLNFHLSQFVPL  596 (793)
T ss_pred             HHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHHHHhhCcccChHHHHHHHHhcCcc--ccchhhHHHHHHHHhhhHH
Confidence              456789999999999999999999999988899999999999999999999999997  9999999999997766444


Q ss_pred             CccCCCCCCCCCCCCCcccCCCCCcccccchHHHHHHHHHhcCCCCchhhHHHHHHHHHhhhcC--CCccccccCC
Q 020144          257 TIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRGAATTGFKRFLALTEAAKDRK--DGPFRKLFNT  330 (330)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  330 (330)
                      .+...+..+.    +.+.-....+.++++++++++.|+..    .+.+|+..+++.||++|+|.  .+|+|++||+
T Consensus       597 i~~~~~~~r~----~f~~fc~r~a~~f~~kf~~~l~R~k~----~s~~g~EQLlldt~slK~~ll~lp~~~s~~n~  664 (793)
T KOG2180|consen  597 IRDALALDRK----YFAQFCVRLAASFIPKFLNVLFRAKP----ISVVGAEQLLLDTESLKDALLTLPPLRSLFND  664 (793)
T ss_pred             HHHHhccccc----hHHHhhHHHHhhcchHHHHHHHHhhh----HhhhHHHHHHHHHHHHHHHhhcCCchhhhccc
Confidence            4333333322    44455666788999999999999998    89999999999999999996  9999999995

>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.13  E-value=5e-09  Score=109.98  Aligned_cols=212  Identities=14%  Similarity=0.202  Sum_probs=171.7

Q ss_pred             hhhhhhcccHHHHHHHHHHHHHHHHHhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCCCCCC
Q 020144           13 RVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLE   92 (330)
Q Consensus        13 ~~ic~IINTADYC~~Ti~qLeekl~e~id~~~ke~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW~~~e   92 (330)
                      .|+..++|.+..|..-+.++-.+.     +.      +..-.|+|..+.+.+...|+..+..||+|++..++...|... 
T Consensus       441 ~y~iA~~N~~~~~a~~~~~~~~~~-----d~------~~~~l~~~~~i~~~~~~~l~e~~~~d~~~~~~~lf~~~W~~g-  508 (667)
T KOG2286|consen  441 EYLIANINNNLKMAMLMVNLKSKY-----DT------LKGLLDGFIEIAKHGVSGLLEEIFLDLQPLLNKLFTKEWCAG-  508 (667)
T ss_pred             HHHHHHHhchhHHHHHHHHHHhcc-----ch------hHHHhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhhch-
Confidence            567778999999988888876666     11      456789999999999999999999999999999999999964 


Q ss_pred             cCCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhccCCChhhHhhHHhhHHHHHHHHhhCC
Q 020144           93 SVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIP  172 (330)
Q Consensus        93 ~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis~~gaeQLLLD~~sLK~~Ll~LP  172 (330)
                            .-+..|+.++.+|++++.++..+. |..|.+.+...++-.|+.+|.+=|-.-.-++|+|..|...++.+|.++-
T Consensus       509 ------~~~~~Iv~T~~dy~~D~~~~~~~~-f~~fi~e~~~~~v~~Yl~~l~~kr~~~~~~~~~i~~d~~~~~~~f~~~~  581 (667)
T KOG2286|consen  509 ------SVTENIVATLDDYLPDFKELMGEY-FVRFIEEASLELVIEYLRALSKKRASIQELIEKIKSDAETLYHFFRKYG  581 (667)
T ss_pred             ------hhHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHHHhC
Confidence                  368899999999999999998887 9999999999999999999977332222589999999999999998876


Q ss_pred             CCCCCCCCchhhHHHHHHhHHHHHHHhhHhcC-CchhH---HHHHHhhCCCCCHHHHHHHHhhc-CCCHHHHHHHHHHHH
Q 020144          173 SLGRQTSNAASYTKFVSREMSKAEALLKVILS-PVDSV---ADTYRALLPEGTPMEFQRILELK-GLKKADQQTILDDFN  247 (330)
Q Consensus       173 ~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~s-P~e~~---v~~Y~~L~~d~S~~~FqkIL~LK-Gl~k~eq~~lle~f~  247 (330)
                      +             -|+.-..-+..+-+++.. ++|.+   +.+|...-||.+.+...+||..| |+++++.+++++..+
T Consensus       582 ~-------------~~~~~~~~~~~l~el~~~~d~d~~~~~~~~l~~~YpD~~~~~l~~il~~R~dls~~~~k~i~~~~~  648 (667)
T KOG2286|consen  582 S-------------DVDTLISTISTLAELISLQDPDLIKLEVSTLLECYPDIPKDHLEAILKIRGDLSRSEKKKIVDILK  648 (667)
T ss_pred             c-------------chhhhhhhhHHHHHHHhcCChHHHHHHHHHHHHHCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            5             223334445566666655 77765   45566667899999999999999 899999999999886


Q ss_pred             hcCCCCCCCC
Q 020144          248 KHGPGTTQPT  257 (330)
Q Consensus       248 ~~~~~~~~~~  257 (330)
                      . +.+...|+
T Consensus       649 ~-~~~~~~~~  657 (667)
T KOG2286|consen  649 E-SMGSQEPD  657 (667)
T ss_pred             H-HHhhhCcC
Confidence            3 34444443

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases

Probab=99.10  E-value=8.9e-10  Score=112.61  Aligned_cols=210  Identities=21%  Similarity=0.327  Sum_probs=154.8

Q ss_pred             CccchhhhhhhcccHHHHHHHHHHHHHHHH-----------------Hhhhhhc-cCCcccchhhhHHHHHHHHHHHHHH
Q 020144            8 SERDERVICYIVNSAEYCHKTSGDLAESVS-----------------KIIDSQL-ADGVDMSEVQDEFSAVITKALVTLV   69 (330)
Q Consensus         8 s~e~~~~ic~IINTADYC~~Ti~qLeekl~-----------------e~id~~~-ke~Idf~~e~D~F~~visk~I~~LV   69 (330)
                      +...+..+|.++|+|.||...+.+.+|.+-                 +..+..- .+.--|+++-..|..+..+....++
T Consensus       240 ~~~~l~~l~~~lnsa~yi~~~L~eW~e~~~Flq~~~~~~~~~~~~~~~~~~~~~~~~~siFde~i~~y~~l~~~~~~~iv  319 (494)
T PF04437_consen  240 GDSGLERLCKILNSANYIENVLREWSEDVFFLQMRAKESESSNNSLEDIANETSSEEGSIFDETISAYEKLRKRMLESIV  319 (494)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCTSHHHH------------HHHHHHHHHTT--S-TTHHHHHHHHHHHTHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhcCCCeeehhhccchhhcccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            455678899999999999999998887432                 2222110 1334699999999999999999999


Q ss_pred             HHHhhhchHHhhcccC-CCCCCCCcC-----CCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHh
Q 020144           70 LGLETKFDNEMAGMTR-VPWGSLESV-----GDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANI  143 (330)
Q Consensus        70 ~~le~~le~a~~~m~~-~nW~~~e~V-----gD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I  143 (330)
                      +.+...++..++...+ ..|...+..     ...|+-.......|+..+..+...|++..|..+...+++.+..-+++.|
T Consensus       320 ~~v~~~~k~~lk~Y~k~~~W~~~~~~~~~~~~~~S~el~~~L~~L~~~L~~L~~~L~~~~f~~i~r~ia~~l~~~l~~~I  399 (494)
T PF04437_consen  320 DRVVKEFKASLKAYFKRSQWSSIESPSDSSPLSPSPELVPALSLLRSRLSFLERSLPPADFRRIWRRIASKLDDYLWESI  399 (494)
T ss_dssp             HHHHHHHHHHTHHHHT--GGGT-------------GGGHHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCccCCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999 999887665     4678888999999999999999999999999999999999999999999


Q ss_pred             HhccCCChhhHhhHHhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCchh-------HHHHHHhh
Q 020144          144 FKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDS-------VADTYRAL  216 (330)
Q Consensus       144 ~k~kpis~~gaeQLLLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~e~-------~v~~Y~~L  216 (330)
                      +.....+..||.||..|+..|...|..             |...-++.|.++...+++|.-|.+.       +-..|.. 
T Consensus       400 l~~n~Fs~~Ga~Ql~~D~~~L~~~~~~-------------~~~~p~~~f~~l~E~~~LL~L~~~~~~~~~~~l~~~~~~-  465 (494)
T PF04437_consen  400 LMSNKFSRAGAAQLQFDMRALFSVFSQ-------------YTPRPEAFFKRLREACKLLNLPYGSAKLLKEFLSKSYIK-  465 (494)
T ss_dssp             TTTS-B-HHHHHHHHHHHHHHHTTS---------------TTSGG-HHHHHHHHHHHHHGGGG-CGG--TTTTSHHHHH-
T ss_pred             hhcCeeChhHHHHHHHHHHHHHHHHHh-------------hccCHHHHHHHHHHHHHHcCCCCcchhhhHHHHhhhhcc-
Confidence            999999999999999999998877744             4445567788888889998877532       1222222 


Q ss_pred             CCCCCHHHHHHHHhhcCCCH
Q 020144          217 LPEGTPMEFQRILELKGLKK  236 (330)
Q Consensus       217 ~~d~S~~~FqkIL~LKGl~k  236 (330)
                           ..++.++|+--|+..
T Consensus       466 -----~~~~~~~l~~lgI~~  480 (494)
T PF04437_consen  466 -----NENARKLLEELGISH  480 (494)
T ss_dssp             -----HT--SHHHHHTT-SS
T ss_pred             -----chHHHHHHHHCCCCc
Confidence                 356666666666665

RINT1 also functions in membrane trafficking from the endoplasmic reticulum(ER) to the Golgi complex in interphase cells [, , ]. In addition to this, the TIP-1 protein, which is involved in the retrograde transport from the Golgi to the ER []. They share a similar domain organisation with an N-terminal leucine heptad repeat rich coiled coil and an ~500-residue C-terminal RINT1/TIP20 domain, which might be a protein-protein interaction module necessary for the formation of functional complexes.; PDB: 3FHN_A.

>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane

Probab=98.92  E-value=9.7e-09  Score=99.64  Aligned_cols=190  Identities=18%  Similarity=0.247  Sum_probs=129.2

Q ss_pred             chhhhhhhcccHHHHHHHHHHHHHHHHHhhhhh-ccC-CcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCC
Q 020144           11 DERVICYIVNSAEYCHKTSGDLAESVSKIIDSQ-LAD-GVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPW   88 (330)
Q Consensus        11 ~~~~ic~IINTADYC~~Ti~qLeekl~e~id~~-~ke-~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW   88 (330)
                      .+..++=|+...+|++.....||+-+......+ ..+ .+.+ ...+.|.+..+.|-+.|...+..+++--+ ++...||
T Consensus        91 ~l~qi~Qi~iNl~~le~Ac~~le~~l~~~~~~~~~~~~~~~l-~a~~~f~~~r~~Ae~~I~~lv~~KIDe~l-ela~yDW  168 (311)
T PF04091_consen   91 NLSQIVQIVINLEYLEKACKELEEFLSSLRGIPQSAGGHIRL-KATKMFKDARKAAEKRIFELVNSKIDEFL-ELAEYDW  168 (311)
T ss_dssp             -HHHHHHHHHHHHHHHTTHHHHHHHHHHHHT-----------------S---TTHHHHHHHHHHHHHHHHHH-TT--TT-
T ss_pred             CHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCCCccchHhHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcccce
Confidence            455677788888999999999999998887432 112 2334 34599999999999999999999999999 9999999


Q ss_pred             CCCCcCCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHh--HhccCCChhhHhhHHhhHHHHHH
Q 020144           89 GSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANI--FKCKHISETGAQQMLLDTQAVKT  166 (330)
Q Consensus        89 ~~~e~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I--~k~kpis~~gaeQLLLD~~sLK~  166 (330)
                      ...+..++.|.||.++...|+..+..+...|++.+....|-.....+..+|++.|  -.+|.|++.|.+|+.+|+..+..
T Consensus       169 ~~~~~~~~ps~yi~dli~fL~~~f~s~l~~LP~~v~~~~~~~a~~his~~l~~~Ll~~~vk~in~~al~~~~~Dv~~lE~  248 (311)
T PF04091_consen  169 TPTEPPGEPSDYINDLIQFLETTFSSTLTNLPPSVKQLVYFSACDHISESLLDLLLSDDVKRINMNALQNFDLDVKYLES  248 (311)
T ss_dssp             -------S--HHHHHHHHHHHHHHHTTTTTSH-HHHHHHHHHHHHHHHHHHHHHHT---------TTHHHHHHHHHHHHH
T ss_pred             ecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998888899999999999999999999999999  66899999999999999999999


Q ss_pred             HHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCc-hhH
Q 020144          167 ILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPV-DSV  209 (330)
Q Consensus       167 ~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~-e~~  209 (330)
                      +..++|..+.+       ...+...|..+..++-++++.. |.|
T Consensus       249 f~~~~~~~~~~-------~~~L~~~F~eLrQlvdLl~s~~~~~y  285 (311)
T PF04091_consen  249 FADSLPVPGNN-------IPSLRETFAELRQLVDLLLSDDWEEY  285 (311)
T ss_dssp             HHTT-SSSS---------SSTTGGGGHHHHHHHHHHH-------
T ss_pred             HHHhCcCcccc-------cccHHHHHHHHHHHHHHHhcCCHHHH
Confidence            99999876543       2345566788889999999863 444

The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0000145 exocyst; PDB: 2A2F_X.

>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]

Probab=98.73  E-value=9e-07  Score=90.48  Aligned_cols=197  Identities=12%  Similarity=0.129  Sum_probs=153.8

Q ss_pred             cHHHHHHHHHHHHHHHHHhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCCCCCCcCCCcCcc
Q 020144           21 SAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEY  100 (330)
Q Consensus        21 TADYC~~Ti~qLeekl~e~id~~~ke~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW~~~e~VgD~S~Y  100 (330)
                      -|+|.-.+...--+.+.+-...+..+.  |...-|+|.+|..-+...|+..+..+|.|++.+++..+|+..       +-
T Consensus       502 ~A~y~~~~~sntfeLitseye~d~~~~--lgkTvDgfi~I~~~s~~~l~~~i~~d~~pa~~~iF~~~Wy~g-------S~  572 (742)
T COG5173         502 IAQYITSLPSNTFELITSEYENDEVKE--LGKTVDGFIDILKASNTFLAEFIIYDCQPAIDKIFTDEWYGG-------SV  572 (742)
T ss_pred             HHHHHHhcchhhhhhhhHHHHHHHHHH--hcccchhHHHHHhhhhHHHHHHHHHhhhhhHHHhcCcccccc-------ch
Confidence            477777777766666666665554444  778889999999999999999999999999999999999953       46


Q ss_pred             HHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhc-cCCChh-hHhhHHhhHHHHHHHHhhCCCCCCCC
Q 020144          101 VNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKC-KHISET-GAQQMLLDTQAVKTILLDIPSLGRQT  178 (330)
Q Consensus       101 V~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~-kpis~~-gaeQLLLD~~sLK~~Ll~LP~~~~~~  178 (330)
                      +..|+.++++++.++.+++++..|-+|.+.+..+++.+|+.+|.+= ..+..- +.|||.-|..-+...|..+-.     
T Consensus       573 ~k~IvdTl~dyl~D~~~~M~~~lFv~Fi~e~s~~~vi~yl~~l~~k~a~~~~~na~~~lksD~~~~y~~f~~y~d-----  647 (742)
T COG5173         573 TKVIVDTLQDYLSDYQNTMSEYLFVTFIHELSMSIVIAYLKQLGRKRASIAEENASRTLKSDHTKLYEMFSGYGD-----  647 (742)
T ss_pred             HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHHHhhCC-----
Confidence            8899999999999999999999999999999999999999999663 223222 689999999999999987765     


Q ss_pred             CCchhhHHHHHHhHHHHHHHhhHhcC-Cchh---HHHHHHhhCCCCCHHHHHHHHhhc-CCCHH
Q 020144          179 SNAASYTKFVSREMSKAEALLKVILS-PVDS---VADTYRALLPEGTPMEFQRILELK-GLKKA  237 (330)
Q Consensus       179 ~~~~sY~k~V~~~~~klE~lLKvL~s-P~e~---~v~~Y~~L~~d~S~~~FqkIL~LK-Gl~k~  237 (330)
                            ..+|...+.-++.++=.+.+ |.|.   ++..|....+|...+-...||.-+ ++.++
T Consensus       648 ------~e~~k~tl~pI~k~~~~m~~~~~d~~~~~~~~lkeiYwD~~~sli~~Ilk~R~Dl~~s  705 (742)
T COG5173         648 ------PEDVKTTLSPILKIIPLMDTRNDDLFIVEVKSLKEIYWDIKKSLIKTILKKRQDLTES  705 (742)
T ss_pred             ------HHHHHHHHHHHHHHHcccccCCchHHHHHHHHHHHHhccchHHHHHHHHHhhhhhHHH
Confidence                  46677666654444333333 5554   344555555676567778888876 88887

>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known

Probab=98.13  E-value=0.00024  Score=66.61  Aligned_cols=173  Identities=16%  Similarity=0.210  Sum_probs=125.6

Q ss_pred             HHHHHHHHHHHHHhhhchHHhhcccCCCCCCCCcCCCcCccHHHHHHHHhhhHHHHhh-----hccHHHHHHHHHHHHHH
Q 020144           60 VITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGS-----LLSPIYFQFFLDKLASS  134 (330)
Q Consensus        60 visk~I~~LV~~le~~le~a~~~m~~~nW~~~e~VgD~S~YV~~i~~~L~~~~~~i~~-----~L~~~Y~~~fcDKlv~~  134 (330)
                      +..-+....+..+ -+++.....|.++.|.--|-..+.|+||..+...+..+...+.+     .+++.-...+.+.++..
T Consensus        54 Lr~~iy~~~a~~~-l~~~~i~~~Ia~vKWdvkev~~qhs~YVd~l~~~~~~f~~rL~~i~~~~~i~~~~~~~lw~~~i~~  132 (234)
T PF10474_consen   54 LREPIYKCVASRL-LDLEQILNSIANVKWDVKEVMSQHSSYVDQLVQEFQQFSERLDEISKQGPIPPEVQNVLWDRLIFF  132 (234)
T ss_pred             HHHHHHHHHHHHH-cCHHHHHHHHHHcCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence            4444444444433 36678889999999987677778999999999999987776633     33666777778888888


Q ss_pred             HHHHHHHHhHhccCCChhhHhhHHhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCchhHHHHHH
Q 020144          135 LGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYR  214 (330)
Q Consensus       135 fi~~f~~~I~k~kpis~~gaeQLLLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~e~~v~~Y~  214 (330)
                      +...+++..=+.|+-|..|--+|.||.+.+...|-.+-...   +.|         +.+-.|+.+|..=-|.+.+.+==.
T Consensus       133 ~~~~Lveg~s~vkKCs~eGRalM~lD~q~~~~~le~l~~~~---~~p---------~~~~Ve~YIKAyYl~e~e~~~W~~  200 (234)
T PF10474_consen  133 AFETLVEGYSRVKKCSNEGRALMQLDFQQLQNKLEKLSGIR---PIP---------NREYVENYIKAYYLPEEELEEWIR  200 (234)
T ss_pred             HHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHcCCC---CCc---------cHHHHHHHHHHHcCCHHHHHHHHH
Confidence            88888888888999999999999999999999997775422   222         234445677777777654333233


Q ss_pred             hhCCCCCHHHHHHHHhhc-CCCHHHHHHHHHHH
Q 020144          215 ALLPEGTPMEFQRILELK-GLKKADQQTILDDF  246 (330)
Q Consensus       215 ~L~~d~S~~~FqkIL~LK-Gl~k~eq~~lle~f  246 (330)
                      .. ++.|...+..++..- +.+|.+.+.+++..
T Consensus       201 ~h-~eYs~~ql~~Lv~~~~~~~kk~r~~ll~~i  232 (234)
T PF10474_consen  201 TH-TEYSKKQLVGLVNCAAASKKKTRQRLLNAI  232 (234)
T ss_pred             hC-cccCHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence            33 677888887777776 55788888887654

The N-terminal domain of some members is PF10475 from PFAM (DUF2450).

>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.42  E-value=0.0096  Score=63.15  Aligned_cols=208  Identities=13%  Similarity=0.192  Sum_probs=157.4

Q ss_pred             hhhhhhhcccHHHHHHHHHHHHHHHHHhhhhhccCCc----------ccchhhhHHHHHHHHHHHHHHHH-HhhhchHHh
Q 020144           12 ERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGV----------DMSEVQDEFSAVITKALVTLVLG-LETKFDNEM   80 (330)
Q Consensus        12 ~~~ic~IINTADYC~~Ti~qLeekl~e~id~~~ke~I----------df~~e~D~F~~visk~I~~LV~~-le~~le~a~   80 (330)
                      ....-.-+|++|-|.+-+..|-+.+.+-...-|...+          ++.+..+.|-++.+.|++.|... +-..++|.+
T Consensus       541 ~~~fl~~LNn~~ls~eyi~~L~~~le~~~~~vf~~~~d~~~l~~~l~~l~~l~~~f~~L~k~g~~~Lf~~~lkpRi~~~i  620 (773)
T KOG0412|consen  541 KENFLTALNNADLSKEYIHTLKKTLESDCTEVFPQNFDRAKLKSCLSNLEALSLKFKDLLKWGMEQLFSTVLKPRIRPWI  620 (773)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHhhhh
Confidence            3445567899987777777666666555544433322          56677789999999999999996 458999999


Q ss_pred             hcccCCCCCC-CCc---CCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhccCCChhhHhh
Q 020144           81 AGMTRVPWGS-LES---VGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQ  156 (330)
Q Consensus        81 ~~m~~~nW~~-~e~---VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis~~gaeQ  156 (330)
                      -.+.+++..- .+.   -+.+-+||.+....+.+.+--+++.|.+..|..|..-+++.++...=..|+||+ .+..||=|
T Consensus       621 d~f~~is~~ls~edy~~~ea~d~~Vq~fl~~v~~l~~~~k~~ltp~nY~sLlsl~~~~ia~~LE~~i~k~~-FNrlG~lq  699 (773)
T KOG0412|consen  621 DTFVNISYNLSEEDYAAYEANDPWVQQFLSSVEQLLAELKNSLTPENYDSLLSLIVDEIATQLEQIIWKIQ-FNRLGGLQ  699 (773)
T ss_pred             hhhhhhhccccHHHHhhhccCChHHHHHHHHHHHHHHhhhcccChhhHHHHHHHHHHHHHHHHHHHHHHhH-HHhhcchH
Confidence            8888877752 122   223557999999999999999999999888888888888777777777777765 89999999


Q ss_pred             HHhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCchhHHHHHHhhCCC-----CCHHHHHHHHhh
Q 020144          157 MLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPE-----GTPMEFQRILEL  231 (330)
Q Consensus       157 LLLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~e~~v~~Y~~L~~d-----~S~~~FqkIL~L  231 (330)
                      |=-|+.+|=..|...-            .-.|...|.||-.|+-+|.--.+.....|+.--..     -|+++-.++|.|
T Consensus       700 LDre~r~lis~lt~~t------------~~~lRdKf~RLtQIatLLnle~~se~le~w~~~~g~~twrLt~~EVr~vl~l  767 (773)
T KOG0412|consen  700 LDRELRALISYLTGVT------------QWNLRDKFARLTQIATLLNLEKDSEILEYWGPNSGPLTWRLTPAEVRKVLAL  767 (773)
T ss_pred             hhHHHHHHHHHhhccc------------chhHHHHHHHHHHHHHHHcccccchHHHhcCCCCCCceEEeCHHHHHHHHHh
Confidence            9999999988884332            35688899999999999988777777777653211     355666888888


Q ss_pred             c
Q 020144          232 K  232 (330)
Q Consensus       232 K  232 (330)
                      |
T Consensus       768 r  768 (773)
T KOG0412|consen  768 R  768 (773)
T ss_pred             h
Confidence            7

>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins []

Probab=96.57  E-value=0.37  Score=51.81  Aligned_cols=206  Identities=12%  Similarity=0.122  Sum_probs=144.0

Q ss_pred             cchhhhhhhcccHHHHHHHHHHHHHHHHHhhhhhccCCcc----cchhhhHHH----HHHHHHHHHHHHHHhhhchHHhh
Q 020144           10 RDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVD----MSEVQDEFS----AVITKALVTLVLGLETKFDNEMA   81 (330)
Q Consensus        10 e~~~~ic~IINTADYC~~Ti~qLeekl~e~id~~~ke~Id----f~~e~D~F~----~visk~I~~LV~~le~~le~a~~   81 (330)
                      +++. -.-+||.|+-+...++.--+   +.+-|-.....+    +...+..|.    +-++.+++..+..+...++..+.
T Consensus       481 ~~l~-fl~~i~~~~~i~~l~~~~~~---~~l~pl~~~~~~~~~~~~~~k~~~~~~le~~v~~gL~~~i~~l~~~v~~iL~  556 (710)
T PF07393_consen  481 PPLV-FLELINQADTILQLLQIFYK---EELLPLIQSSPDFLNECIQKKKSFESRLEEKVNAGLNKGIDVLMNWVEFILS  556 (710)
T ss_pred             CCcc-HHHHHHHHHHHHHHHHHHHH---HHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4555 44578888877777664432   222222222221    223333333    33445555555556666667777


Q ss_pred             cccCCCCCCCCc-C---CCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhccCCChhhHhhH
Q 020144           82 GMTRVPWGSLES-V---GDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQM  157 (330)
Q Consensus        82 ~m~~~nW~~~e~-V---gD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis~~gaeQL  157 (330)
                      .-.+.+...-+. .   ...++....++..|...+..+...+....+..|+-.+...|...++.++.| .+++..||=||
T Consensus       557 ~Qkk~Df~p~~~~~~~~~~~T~ac~~vv~~L~~~~~~~~~~l~~~nl~~f~~elg~~l~~~l~~h~kk-~~vs~~Gg~~l  635 (710)
T PF07393_consen  557 EQKKTDFKPKEDDLSLDQQPTPACQEVVEFLERHCSLLKGSLDGSNLDVFLQELGERLHRLLLKHLKK-FTVSSTGGLQL  635 (710)
T ss_pred             hcCCCCCCCCccccccccCCCHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHh-CccCchhHHHH
Confidence            555566654222 2   258889999999999999999999998889999999999999999999977 56999999999


Q ss_pred             HhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCchhHHHHHHhhCC-CCCHHHHHHHHhhc
Q 020144          158 LLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLP-EGTPMEFQRILELK  232 (330)
Q Consensus       158 LLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~e~~v~~Y~~L~~-d~S~~~FqkIL~LK  232 (330)
                      .-|+.....++.++-            .+.|...|+.|-.+-.++..++|.+.+-...... .-+..+....+.+|
T Consensus       636 ~~Dl~~Y~~~~~~~~------------~~~v~~~F~~L~~l~nl~~v~~~~l~~~~~~~~~~~~~~~~i~~fi~~R  699 (710)
T PF07393_consen  636 IKDLNEYQDFIRSWG------------IPSVDEKFEALKELGNLFIVDPENLKELCREGQLGRFSPEEIYEFIQRR  699 (710)
T ss_pred             HHHHHHHHHHHHHcC------------CchHHHHHHHHHHHHhheeecHHHHHHHHhhccccCCCHHHHHHHHHHh
Confidence            999999999998883            3679999999999999999998766655544332 23445555555544

; GO: 0006887 exocytosis, 0048278 vesicle docking, 0005737 cytoplasm

>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]

Probab=95.97  E-value=0.31  Score=52.72  Aligned_cols=186  Identities=15%  Similarity=0.174  Sum_probs=127.2

Q ss_pred             hcccHHHHHHHHHHHHHHHHHhhhhhccCCcccchh--hhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCCCCCCcCC
Q 020144           18 IVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEV--QDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVG   95 (330)
Q Consensus        18 IINTADYC~~Ti~qLeekl~e~id~~~ke~Idf~~e--~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW~~~e~Vg   95 (330)
                      |+-+-+|...-..++.+-+.....-+..+   .+.-  .=.|..--+.+-..|...+..+++.-+.-. +.+|-..|..+
T Consensus       551 I~~n~~~fe~a~~~f~~~a~~~~~~~~~~---~e~~~~s~~l~~sr~~Ae~~l~~~i~~Kid~f~~l~-~~dW~t~e~pq  626 (800)
T KOG2176|consen  551 IAANLDYFEIAADFFLEFACHLNGIPNRD---AERPSSSTKLLASRKLAETELIELIKLKIDDFLELI-EYDWTTTEVPQ  626 (800)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHccCCcccc---ccccccchhhhhhhhhHHHHHHHHHhhhhHHHHHHh-hccccccccCC
Confidence            33444555555556655555543322111   1111  233444445555566666777777666544 99999999999


Q ss_pred             CcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhc--cCCChhhHhhHHhhHHHHHHHHhhCCC
Q 020144           96 DQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKC--KHISETGAQQMLLDTQAVKTILLDIPS  173 (330)
Q Consensus        96 D~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~--kpis~~gaeQLLLD~~sLK~~Ll~LP~  173 (330)
                      |.|.|+..+..-|...+.....+|+-.-....|-...+.+..++++.+..+  |.|++.+++|+.+|+..+..+--+=|.
T Consensus       627 ~~~~~i~e~~~yLet~~~s~~q~LP~~v~~~v~~~~~~his~~iv~llldd~ik~is~~Ai~~fnlDv~~lEsfa~~~p~  706 (800)
T KOG2176|consen  627 GPSEYINEMLIYLETMFSSALQILPYKVAQLVCLRELDHISTSIVGLLLDDSIKQISMGAITNFNLDVNYLESFAASPPV  706 (800)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHccchhHHHHHHhccCCCC
Confidence            999999999999999999999999988888888889999999999999876  889999999999999999988877333


Q ss_pred             CCCCCCCchhhHHHHHHhHHHHHHHhhHhcCC-chhHHHHHH
Q 020144          174 LGRQTSNAASYTKFVSREMSKAEALLKVILSP-VDSVADTYR  214 (330)
Q Consensus       174 ~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP-~e~~v~~Y~  214 (330)
                      .+.+.       ......|=.+..++-+|++. .|.|.+.|.
T Consensus       707 ~~~~~-------~~~~~~fielrQlinLL~~~~~e~y~~~~~  741 (800)
T KOG2176|consen  707 PPNQE-------GVLAKAFIELRQLINLLLLSDWETYLNDYG  741 (800)
T ss_pred             CCccc-------chhHHHHHHHHHHHHHHHhcCHHHhhCchh
Confidence            22221       12222333444677777654 455544443

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []

Probab=95.29  E-value=2  Score=47.05  Aligned_cols=153  Identities=17%  Similarity=0.235  Sum_probs=112.7

Q ss_pred             CCcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccC-CCCCC--CCcCC-----C----cCccHHHHHHHHhhhHH
Q 020144           46 DGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTR-VPWGS--LESVG-----D----QSEYVNGINMILTSSIP  113 (330)
Q Consensus        46 e~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~-~nW~~--~e~Vg-----D----~S~YV~~i~~~L~~~~~  113 (330)
                      ....|......+..+...|.....+.+...+...+..+.+ ..|..  ....+     +    .+.||++|-+.|-.--.
T Consensus       559 ~~~ll~~~~~~~~~l~~~~~~~v~d~l~~~i~~~L~~vp~~~~W~~~~~~~~~~~~LP~FS~~P~eyIT~IGeyLLtLPq  638 (766)
T PF10191_consen  559 SFSLLPEARAAVSRLNQQAQDLVFDVLFSPIRQQLKSVPSLPSWSSAGVGETSTLDLPSFSLSPQEYITQIGEYLLTLPQ  638 (766)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCcccccCCccccccCCCCccccChHHHHHHHHHHHHhhHH
Confidence            3446888899999988888888888899999999999987 47887  21111     2    25688888877664222


Q ss_pred             HHhhhcc----------------------------HHHHHHHHHHHHHHHHHHHHHHhHhccCCChhhHhhHHhhHHHHH
Q 020144          114 VLGSLLS----------------------------PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVK  165 (330)
Q Consensus       114 ~i~~~L~----------------------------~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis~~gaeQLLLD~~sLK  165 (330)
                      .+.+++.                            +..-..++++++...+..|.+.|.++..+++.|+.||..|+.=|.
T Consensus       639 ~LEp~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~wl~~va~~~~~~~~~~i~~i~~l~~~~~~QL~~Di~Yl~  718 (766)
T PF10191_consen  639 QLEPFAESDNSALAFALHAGKLPYPPESDEEAEEADDFADEWLGKVARATCALYLEQILEIPELSESGAKQLATDIDYLS  718 (766)
T ss_pred             hhhhhhcCcchHHHHHHHhcCCCCCCCcccCCcchhhhHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHH
Confidence            2222221                            145668899999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCchhHHHHHH
Q 020144          166 TILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYR  214 (330)
Q Consensus       166 ~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~e~~v~~Y~  214 (330)
                      +.|..|=...     |           ..+..+..+|.+|+|.|.+.-.
T Consensus       719 nVl~aLg~~~-----~-----------~~L~~~~~ll~~~~~~~~~~~~  751 (766)
T PF10191_consen  719 NVLSALGLSP-----P-----------PNLQQLVTLLKAPPDQYAQVAK  751 (766)
T ss_pred             HHHHHhCCCC-----C-----------HHHHHHHHHHcCCHHHHHHHHh
Confidence            9998875311     1           1355677778888865555443

COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].

>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]

Probab=95.23  E-value=0.82  Score=50.08  Aligned_cols=186  Identities=16%  Similarity=0.241  Sum_probs=133.4

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccC----CCCCCCCcCCCcCccHHHHHHHHhhhHHHHhhhccHHHHH
Q 020144           50 MSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTR----VPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQ  125 (330)
Q Consensus        50 f~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~----~nW~~~e~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~  125 (330)
                      +++.-|.|-.+..+|+-.|=-.|-.-|=..+....+    .-|+..+ .|+.-+-|..+.+.|...-.-+...|++.=++
T Consensus       775 ~ee~~~~fq~la~~cLLlLhlEVRv~Cfh~l~~~s~~~n~~i~~~~~-s~e~D~~V~aL~k~l~~~e~klk~~L~e~k~~  853 (982)
T KOG3691|consen  775 YEELADSFQRLAFDCLLLLHLEVRVQCFHYLNPLSKLRNTSIVNRDV-SGEPDPSVVALNKDLSTTEEKLKACLNEWKRR  853 (982)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceeecccc-cCCCCHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence            445678888999999876655665555555553333    3466543 67888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhHhccCCChhhHhhHHhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCC
Q 020144          126 FFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSP  205 (330)
Q Consensus       126 ~fcDKlv~~fi~~f~~~I~k~kpis~~gaeQLLLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP  205 (330)
                      +..+=+...+-..+++.-..++.+++.|..||+..+..|.+.|.++...           +  .-.|++.-++--++..-
T Consensus       854 yIFeGL~hL~s~~LI~~a~~i~~ln~~~ikkMcRNv~~lQQ~Lsnit~~-----------r--evdld~ar~fy~ll~nt  920 (982)
T KOG3691|consen  854 YIFEGLGHLVSSILISGAQYIERLNEGGIKKMCRNVSALQQILSNITES-----------R--EVDLDKARRFYELLQNT  920 (982)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcccc-----------c--ccccHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999888762           2  44566677777777665


Q ss_pred             chhHHHHHHhhCCCCCHHHHHHHHhh-----cCCCH-HHHHHHHHHHHhc
Q 020144          206 VDSVADTYRALLPEGTPMEFQRILEL-----KGLKK-ADQQTILDDFNKH  249 (330)
Q Consensus       206 ~e~~v~~Y~~L~~d~S~~~FqkIL~L-----KGl~k-~eq~~lle~f~~~  249 (330)
                      ++.+.+....-=..-|.++...++.+     ||+-+ .-+..+++.+.+.
T Consensus       921 ~deile~v~d~~~qfse~e~~qllrls~rS~~g~~k~~~~~e~~qkl~n~  970 (982)
T KOG3691|consen  921 ADEILEHVIDARKQFSEPELKQLLRLSYRSLKGDAKRNGRDELLQKLSNI  970 (982)
T ss_pred             HHHHHHHHHhccccccHHHHHHHHHHHHHhhccccCCCchHHHHHHHHHH
Confidence            54444433332222445555555544     55533 4445555555443

>KOG2218 consensus ER to golgi transport protein/RAD50-interacting protein 1 [Intracellular trafficking, secretion, and vesicular transport; Cell cycle control, cell division, chromosome partitioning]

Probab=92.44  E-value=5.8  Score=42.96  Aligned_cols=122  Identities=17%  Similarity=0.261  Sum_probs=93.3

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCCCCCCcCCC-----cCccHHHHHHHHhhhHHHHhhhccHHHH
Q 020144           50 MSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGD-----QSEYVNGINMILTSSIPVLGSLLSPIYF  124 (330)
Q Consensus        50 f~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW~~~e~VgD-----~S~YV~~i~~~L~~~~~~i~~~L~~~Y~  124 (330)
                      |.++.+....+.+.-+.-++..+-..+++..++..+.+|.+.+.-..     -|+=+......|+..+..+...+++.-|
T Consensus       548 F~~~~~~leel~~~~~~~~iv~~l~~~~~~~r~y~k~~w~s~~~~~~~~~~svS~~iv~~ld~Lr~~l~~l~~~l~~~~f  627 (737)
T KOG2218|consen  548 FEEVSNFLEELMSTWMLKLIVHLLQNLKDLLRNYKKNKWVSLEESENIGPLSVSREIVNLLDGLRRHLDDLEENLNPLDF  627 (737)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHhhhhcchhcccchhhcccchHHHHHHHHHHHHHHHHHHHHHhhChhhH
Confidence            66777777777777777888888888899999999999988765221     1555666677777888888888888777


Q ss_pred             HHHHHHHHHHH-HHHHHHHhHhccCCChhhHhhHHhhHHHHHHHHhhC
Q 020144          125 QFFLDKLASSL-GPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDI  171 (330)
Q Consensus       125 ~~fcDKlv~~f-i~~f~~~I~k~kpis~~gaeQLLLD~~sLK~~Ll~L  171 (330)
                      ..+.--++..+ +..|...|++....+.-|++|+..|+..|...|..+
T Consensus       628 s~~~~~l~~~idv~~~~e~il~~~~f~~~~~~~f~~Da~~L~~~fs~y  675 (737)
T KOG2218|consen  628 SAIWRNLQENIDVYVFEEIILKNHKFESSGLFQFVHDAKRLLEVFSEY  675 (737)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHhhhhcCchHHHHHHHHHHHHHHHhccc
Confidence            77775555544 444555567778899999999999999999999665

>PF14923 CCDC142: Coiled-coil protein 142

Probab=91.70  E-value=9.7  Score=39.27  Aligned_cols=114  Identities=17%  Similarity=0.106  Sum_probs=79.2

Q ss_pred             CCCCCCCcC---CCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhc-cCCChhhHhhHHhhH
Q 020144           86 VPWGSLESV---GDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKC-KHISETGAQQMLLDT  161 (330)
Q Consensus        86 ~nW~~~e~V---gD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~-kpis~~gaeQLLLD~  161 (330)
                      --|...-..   ...|.||....+.+-.-+-.--..+++.+----..-.+..|+-.-++.|++= -+.|..||.||+.|.
T Consensus       260 ~~WR~~~~~~lP~~pS~Yv~~~v~~vl~PVl~g~q~L~~~aq~~~l~~~l~a~~eAWLdhIl~~kIKFS~~GAlQL~~DF  339 (450)
T PF14923_consen  260 RYWRRSLSPELPSAPSEYVEYVVETVLEPVLQGVQGLPPEAQIPALSQALTAMLEAWLDHILMHKIKFSLQGALQLRQDF  339 (450)
T ss_pred             chhcccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHccceeeHHHHHHHHHHH
Confidence            567653222   2579999998888754333333356666666666677888888889999875 457899999999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCCchhhHH-HHHHhHHHHHHHhhHhcC
Q 020144          162 QAVKTILLD-IPSLGRQTSNAASYTK-FVSREMSKAEALLKVILS  204 (330)
Q Consensus       162 ~sLK~~Ll~-LP~~~~~~~~~~sY~k-~V~~~~~klE~lLKvL~s  204 (330)
                      ..++..+.+ --.+.++     .=.+ .-..-|.++|..+++|+-
T Consensus       340 ~~Vr~wl~~e~~~Ls~e-----~rq~Ll~l~v~r~~dgv~~lLlq  379 (450)
T PF14923_consen  340 GYVRDWLESECSGLSPE-----LRQTLLSLEVFRRCDGVGLLLLQ  379 (450)
T ss_pred             HHHHHHHHhhhccCCHH-----HHHHHhccHHHHHHHHHHHHHhc
Confidence            999999977 4443211     1111 224567889999999875

>PF12022 DUF3510: Domain of unknown function (DUF3510); InterPro: IPR024603 The COG complex comprises eight proteins (COG1-8) and plays critical roles in Golgi structure and function []

Probab=83.94  E-value=5.4  Score=33.83  Aligned_cols=56  Identities=25%  Similarity=0.286  Sum_probs=48.0

Q ss_pred             CCCCCcCCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHh
Q 020144           88 WGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANI  143 (330)
Q Consensus        88 W~~~e~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I  143 (330)
                      |.+-+.....|.||..|..=|.++.......+.+.-...++.++++.+..+|++.+
T Consensus        24 ~Tnk~~Pt~~S~yV~~il~Pl~~F~~~~~~~~~~~~~~~~~~~v~~~v~~~y~~~~   79 (125)
T PF12022_consen   24 MTNKPVPTKPSPYVSSILRPLKSFLEEYSSYLSPEIIEEWLQKVITEVTERYYEIA   79 (125)
T ss_pred             ccCCCCCCCccHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            54445677899999999999999999998888888899999999999999988764

This uncharacterised domain is found in the C-terminal of COG complex subunit 2 proteins.

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]

Probab=81.67  E-value=16  Score=38.68  Aligned_cols=154  Identities=15%  Similarity=0.124  Sum_probs=79.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHhhhhhc---cC--CcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccC----CCCCC
Q 020144           20 NSAEYCHKTSGDLAESVSKIIDSQL---AD--GVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTR----VPWGS   90 (330)
Q Consensus        20 NTADYC~~Ti~qLeekl~e~id~~~---ke--~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~----~nW~~   90 (330)
                      .+.+-..+-.+.|-+-|..++...-   .+  ++.++.-.+.+..+.-.--+.+|..+...|..-+++..-    ..|-+
T Consensus       485 dd~~llqevl~elle~I~~kl~~~~k~~sdv~a~sle~~g~Sl~a~lp~i~ktIIe~lsd~~~~~lrqv~dvprlyR~Tn  564 (705)
T KOG2307|consen  485 DDGNLLQEVLPELLESIWGKLHDITKVFSDVFAQSLEKHGRSLDALLPQIDKTIIEMLSDVCHQELRQVSDVPRLYRWTN  564 (705)
T ss_pred             ccchHHHHHhHHHHHHHHhhccchhhhhHHHHHHHHHHhcccHHHHhhhHHHHHHHHHHHHHHHHHHHHhccHHHHHhcc
Confidence            3444444555555555555543210   00  012233333343333333344555555555555554444    56877


Q ss_pred             CCcCCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHH--------------HHHHHhHhccCCChh----
Q 020144           91 LESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGP--------------RFYANIFKCKHISET----  152 (330)
Q Consensus        91 ~e~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~--------------~f~~~I~k~kpis~~----  152 (330)
                      -+-..-.|+||.++.+-+.....-...-|.......++.+++..+..              +=-.++-|+|.....    
T Consensus       565 KevPtthSsYVv~aLrpvkal~eg~k~~L~q~~~eeil~gv~seit~~yye~vsDVl~sv~ktesSL~Rlkq~~~~~~g~  644 (705)
T KOG2307|consen  565 KEVPTTHSSYVVTALRPVKALKEGLKCELEQPHTEEILRGVNSEITNYYYEKVSDVLDSVEKTESSLSRLKQKTTTDSGS  644 (705)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Confidence            77778899999998877765433332223222233333333333333              333445555433221    


Q ss_pred             -------------hHhhHHhhHHHHHHHHhhCCC
Q 020144          153 -------------GAQQMLLDTQAVKTILLDIPS  173 (330)
Q Consensus       153 -------------gaeQLLLD~~sLK~~Ll~LP~  173 (330)
                                   ..+||.+|++..-..+-+|--
T Consensus       645 s~gss~~vSddDKir~QL~lDv~~~~s~~~kL~f  678 (705)
T KOG2307|consen  645 SGGSSQTVSDDDKIRQQLYLDVKYFLSYAEKLVF  678 (705)
T ss_pred             CCCCCCCcCcchHHHHHHHHHHHHHHHHHHHhcc
Confidence                         468999999988877766654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	330
3ns4_A	271	Vacuolar protein sorting-associated protein 53; GA	2e-27
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
3fhn_A	706	Protein transport protein TIP20; TIP20P, vesicle t	2e-07
2a2f_X	325	Exocyst complex component SEC15; all helical struc	5e-05

>3ns4_A Vacuolar protein sorting-associated protein 53; GARP complex component, helical bundle, membrane tethering C membrane traffic, VPS51; HET: MSE; 2.90A {Saccharomyces cerevisiae} Length = 271

 Score =  107 bits (267), Expect = 2e-27
 Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 29/178 (16%)

Query: 113 PVLGSLLSPIYFQFFLDKLASSLGPRFYANIFK-CKHISETG----------------AQ 155
            +L      +Y   FLDK+   +   F +N  +  + +                     +
Sbjct: 13  FILSQFNRDVYKWNFLDKVIDIMTTNFVSNTIRLLQPVPPFSLAGSKRKFETRTVVNIGE 72

Query: 156 QMLLDTQAVKTILLDIP------SLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSV 209
           Q+LLD + +K I   +P      S  R+ ++     +     + +    +K++++P+DS 
Sbjct: 73  QLLLDLELLKEIFHTLPESVSNDSDLRENTSYKRVKRHADNNIDQLLKFIKLLMAPLDSA 132

Query: 210 AD---TYRALLPEGT-PMEFQRILELKGLK--KADQQTILDDFNKHGPGTTQPTIAPS 261
            D   TY  L         +  +L LKG+    A  + +   +N     T + +   S
Sbjct: 133 DDYYETYSKLTNNNPDSAVWSFVLALKGIPWDLALWKKMWSAYNLETDDTDEGSRPDS 190

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 5e-08
 Identities = 63/363 (17%), Positives = 128/363 (35%), Gaps = 86/363 (23%)

Query: 19  VNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDN 78
               +Y +K   D+   +S   D+ + +  D  +VQD   ++++K  +  ++       +
Sbjct: 11  TGEHQYQYK---DI---LSVFEDAFVDN-FDCKDVQDMPKSILSKEEIDHIIMS----KD 59

Query: 79  EMAGMTRVPWGSLESVGDQ--SEYVNGINMI----LTSSI---PVLGSLLSPIYFQFFLD 129
            ++G  R+ W +L S  ++   ++V  +  I    L S I       S+++ +Y +   D
Sbjct: 60  AVSGTLRLFW-TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE-QRD 117

Query: 130 KLASSLGPRF--YANIFKCKHISETGAQQMLLDTQAVKTILLD-IPSLGRQ--TSNAASY 184
           +L +     F  Y N+ + +   +   +Q LL+ +  K +L+D +   G+     +    
Sbjct: 118 RLYND-NQVFAKY-NVSRLQPYLK--LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173

Query: 185 TKFVSR-----------EMSKAEALLKVI--LSPVDSVADTYRALLPEGTPM-------E 224
            K   +             +  E +L+++  L        T R+       +       E
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 225 FQRILELKGLKKADQQTILDD---------FNKHGPG-----TTQPTIAPSVVPAAPPAP 270
            +R+L+ K  +      +L +         FN          TT+      V      A 
Sbjct: 234 LRRLLKSKPYENC--LLVLLNVQNAKAWNAFN---LSCKILLTTRFK---QVTDFLSAAT 285

Query: 271 PSSVIPNSASAGFITSRE--DVLTRAAALGRGA------ATTGFKRFLALTEAAKDRKDG 322
            + +  +  S    T  E   +L     L            T   R L++  A   R DG
Sbjct: 286 TTHISLDHHSMTL-TPDEVKSLL--LKYLDCRPQDLPREVLTTNPRRLSII-AESIR-DG 340

Query: 323 PFR 325
              
Sbjct: 341 LAT 343

>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae} Length = 706

 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 35/247 (14%), Positives = 82/247 (33%), Gaps = 29/247 (11%)

Query: 15  ICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLET 74
               +    + ++    L+ +   I  + + +  +  +    F  V       +   ++ 
Sbjct: 462 TMAKLQHVNFVYRKIKSLSSNFIFIQLTDIVNSTESKKYNSLFQNVENDYEKAMSTDMQN 521

Query: 75  KFDNEMAGMTR---------VPWGSLESVGDQSEYVN------GINMI--LTSSIPVLGS 117
              + +  + +           W +LE   D++   +       +N I  L   I  L S
Sbjct: 522 SIVHRIQKLLKETLRNYFKISTWSTLEMSVDENIGPSSVPSAELVNSINVLRRLINKLDS 581

Query: 118 L-LSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGR 176
           + +         ++L + +   F  +I K    ++ G  Q L D +++ + +L +PS   
Sbjct: 582 MDIPLAISLKVKNELLNVIVNYFTESILKLNKFNQNGLNQFLHDFKSLSS-ILSLPS--- 637

Query: 177 QTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKK 236
                   T +    + +   +LK+   P +         +  G     +    +K LK 
Sbjct: 638 ------HATNYKCMSLHELVKILKLKYDPNNQQF-LNPEYIKTGNFTSLKEAYSIKYLKD 690

Query: 237 ADQQTIL 243
              Q  L
Sbjct: 691 TKIQDAL 697

>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster} Length = 325

 Score = 43.5 bits (102), Expect = 5e-05
 Identities = 30/178 (16%), Positives = 57/178 (32%), Gaps = 9/178 (5%)

Query: 5   IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKA 64
            R        +  I+   +Y  K    L E V  + +++ +     S +   F      A
Sbjct: 129 FRQPSITLTQLIQIIIDTQYLEKAGPFLDEFVCHMTNTERSVSQTPSAM---FHVARQDA 185

Query: 65  LVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYF 124
              + L + +K D     ++   W  +E  G  S ++  +   L S+       L  I  
Sbjct: 186 EKQVGLRICSKIDEFF-ELSAYDWLLVEPPGIASAFITDMISYLKSTFDSFAFKLPHIAQ 244

Query: 125 QFFLDKLASSLGPRFYANIFK--CKHISETGAQQMLLDTQAVKTIL--LDIPSLGRQT 178
                     +  + Y+ ++    K IS     Q+ LD    +       +P L    
Sbjct: 245 AACRRTF-EHIAEKIYSIMYDEDVKQISTGALTQINLDLMQCEFFAASEPVPGLKEGE 301

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	330
3ns4_A	271	Vacuolar protein sorting-associated protein 53; GA	100.0
2fji_1	399	Exocyst complex component SEC6; exocytosis, tandem	99.9
3fhn_A	706	Protein transport protein TIP20; TIP20P, vesicle t	98.48
3hr0_A	263	COG4; conserved oligomeric golgi complex, intracel	98.34
2a2f_X	325	Exocyst complex component SEC15; all helical struc	98.2
3swh_A	341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	97.05
3n1e_A	141	Vacuolar protein sorting-associated protein 54; sp	97.03
3mmi_A	386	Myosin-4; globular tail, dilute domain, motor prot	81.72

>3ns4_A Vacuolar protein sorting-associated protein 53; GARP complex component, helical bundle, membrane tethering C membrane traffic, VPS51; HET: MSE; 2.90A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-36  Score=280.41  Aligned_cols=140  Identities=19%  Similarity=0.304  Sum_probs=124.1

Q ss_pred             HHHhhhc-cHHHHHHHHHHHHHHHHHHHHHHh-HhccCC---------------Chh-hHhhHHhhHHHHHHHHhhCCCC
Q 020144          113 PVLGSLL-SPIYFQFFLDKLASSLGPRFYANI-FKCKHI---------------SET-GAQQMLLDTQAVKTILLDIPSL  174 (330)
Q Consensus       113 ~~i~~~L-~~~Y~~~fcDKlv~~fi~~f~~~I-~k~kpi---------------s~~-gaeQLLLD~~sLK~~Ll~LP~~  174 (330)
                      ..|...+ ++.|+||||||+|++|+++|+++| ++|||+               +++ ||||||||+|+||++|++||+.
T Consensus        12 ~~Il~~~nR~~Y~rnFcDK~ve~~~~~Fi~~Ii~~ckPi~pf~~~~~~rk~~~~s~v~gaEQLLLD~~sLK~~Ll~LP~~   91 (271)
T 3ns4_A           12 AFILSQFNRDVYKWNFLDKVIDIMTTNFVSNTIRLLQPVPPFSLAGSKRKFETRTVVNIGEQLLLDLELLKEIFHTLPES   91 (271)
T ss_dssp             -CCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCSSSSCSCSSCHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHheeCcccccccccccccccccchhHHHHHHHHHHHHHHHHHcccc
Confidence            3344544 799999999999999999999999 789999               889 9999999999999999999987


Q ss_pred             CC---CCCCc---hhhHHHHHHhHHHHHHHhhHhcCCc---hhHHHHHHhhCCC-CCHHHHHHHHhhcCCC--HHHHHHH
Q 020144          175 GR---QTSNA---ASYTKFVSREMSKAEALLKVILSPV---DSVADTYRALLPE-GTPMEFQRILELKGLK--KADQQTI  242 (330)
Q Consensus       175 ~~---~~~~~---~sY~k~V~~~~~klE~lLKvL~sP~---e~~v~~Y~~L~~d-~S~~~FqkIL~LKGl~--k~eq~~l  242 (330)
                      +.   +..+|   ++|+|+|+++|++||++|||||+|.   |+|+++|..|+|| +|..+|+|||+|||++  +++|.+|
T Consensus        92 ~~~~~~~~~~ts~~sytK~V~~~~~kle~lLKvLm~P~dppe~~ve~Y~~Li~dn~s~~nF~KIL~LKGv~wdl~~wk~~  171 (271)
T 3ns4_A           92 VSNDSDLRENTSYKRVKRHADNNIDQLLKFIKLLMAPLDSADDYYETYSKLTNNNPDSAVWSFVLALKGIPWDLALWKKM  171 (271)
T ss_dssp             GCSCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCCSCHHHHHHHHHHHTTSCCCHHHHHHHHHHHTCCSCHHHHHHH
T ss_pred             cccccccCCCcccchhhhHHhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCccHHHHHHH
Confidence            65   23455   5799999999999999999999984   7899999999999 9999999999999997  5799999


Q ss_pred             HHHHHhcCCC
Q 020144          243 LDDFNKHGPG  252 (330)
Q Consensus       243 le~f~~~~~~  252 (330)
                      ++.|+....+
T Consensus       172 ~~~f~l~~~~  181 (271)
T 3ns4_A          172 WSAYNLETDD  181 (271)
T ss_dssp             HHHHHHHC--
T ss_pred             HHHHhhcccc
Confidence            9999976544

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.90  E-value=8.5e-23  Score=200.93  Aligned_cols=221  Identities=10%  Similarity=0.147  Sum_probs=204.4

Q ss_pred             hhhhhhhcccHHHHHHHHHHHHHHHHHhhhhhccCCc--ccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCCC
Q 020144           12 ERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGV--DMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWG   89 (330)
Q Consensus        12 ~~~ic~IINTADYC~~Ti~qLeekl~e~id~~~ke~I--df~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW~   89 (330)
                      +.++|.++|++..|.+.+.+|+.++.+.+++.|.+++  +|+...|+|.++.+.|++.|+..+..+++|.|..++...|+
T Consensus       136 ~e~liA~~Nn~~~~~e~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~f~~l~~~~~~~L~~~if~dl~p~~~~lft~~W~  215 (399)
T 2fji_1          136 VEYLIAVSNDQMKAADYAVAISSKYGKLVSKVYEKQITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWY  215 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTHHHHTTTTSGGGT
T ss_pred             HHhhhhhhccHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhc
Confidence            6889999999999999999999999999999998887  89999999999999999999999999999999999999997


Q ss_pred             CCCcCCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhccCCC---hhhHhhHHhhHHHHHH
Q 020144           90 SLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHIS---ETGAQQMLLDTQAVKT  166 (330)
Q Consensus        90 ~~e~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis---~~gaeQLLLD~~sLK~  166 (330)
                      .-       ++|.+|..++.++++.++.+|++.|+..|++.+.+.++.+|+.+|.++.+++   ..+++||..|++.|+.
T Consensus       216 ~~-------~~v~~i~~ti~dy~~d~~~~L~~~~~~~l~~~~~~~~v~~Yl~~l~~~~~~~~~~~~~~~~l~~D~~~l~~  288 (399)
T 2fji_1          216 MG-------SQAQQIADTLDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTALSFEHSFKNKNNKFLEAMKRDFEIFYQ  288 (399)
T ss_dssp             TC-------CHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHGGGGCCCCCCGGGHHHHHHHHHHHHHHH
T ss_pred             CC-------cHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHH
Confidence            52       2999999999999999999999999999999999999999999999755677   8999999999999999


Q ss_pred             HHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCc-hhHHHHHHhh---CCCCCHHHHHHHHhhc-CCCHHHHHH
Q 020144          167 ILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPV-DSVADTYRAL---LPEGTPMEFQRILELK-GLKKADQQT  241 (330)
Q Consensus       167 ~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~-e~~v~~Y~~L---~~d~S~~~FqkIL~LK-Gl~k~eq~~  241 (330)
                      +|.++++.      ...|++.|...+..|+.+.. |.+++ +.+.+.|..+   .||.+....++||.+| +++++++++
T Consensus       289 ~f~~~~~~------~~~~~~~v~~~~~~l~~l~~-L~~d~~~~i~~~~~~l~~~ypD~~~~~V~aiL~~R~D~~~~~~k~  361 (399)
T 2fji_1          289 LFVKVLDG------NESKDTLITQNFTVMEFFMD-LSCEPIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKK  361 (399)
T ss_dssp             HHHHHTTT------CTTHHHHHHHHHHHHHHHHH-HHHSCGGGHHHHHHHHHTTCTTCCSHHHHHHHTTCTTCCHHHHHH
T ss_pred             HHHHhccc------cchhhHHHHHHHHHHHHHHH-hcCCcHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHH
Confidence            99999972      44689999999999999999 88766 8888888665   5789999999999997 699999999


Q ss_pred             HHHHH
Q 020144          242 ILDDF  246 (330)
Q Consensus       242 lle~f  246 (330)
                      +++..
T Consensus       362 ll~~~  366 (399)
T 2fji_1          362 IVQQA  366 (399)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99998

>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}

Probab=98.48  E-value=8.4e-07  Score=92.90  Aligned_cols=216  Identities=16%  Similarity=0.222  Sum_probs=168.9

Q ss_pred             hhhhhhcccHHHHHHHHH---------HHHHHHHHhhhhhccCCcccchhhhHHHHHHHH-HHHHHHHHHhhhchHHhhc
Q 020144           13 RVICYIVNSAEYCHKTSG---------DLAESVSKIIDSQLADGVDMSEVQDEFSAVITK-ALVTLVLGLETKFDNEMAG   82 (330)
Q Consensus        13 ~~ic~IINTADYC~~Ti~---------qLeekl~e~id~~~ke~Idf~~e~D~F~~visk-~I~~LV~~le~~le~a~~~   82 (330)
                      ...|..||+.-|...++.         +|-+.+.+..+..  ..--|++.-..|..+..+ ....+|..+...++.+++.
T Consensus       460 ~~g~~~L~~L~~V~~~L~dWsddvfFLeLw~~l~~~t~s~--~gSIFDetIs~Y~~L~~~~~~~~Iv~~v~~eik~~lK~  537 (706)
T 3fhn_A          460 YQTMAKLQHVNFVYRKIKSLSSNFIFIQLTDIVNSTESKK--YNSLFQNVENDYEKAMSTDMQNSIVHRIQKLLKETLRN  537 (706)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTTCC--CSCTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhcccCcc--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445566666666666665         5555566554433  234699999999999999 9999999999999999999


Q ss_pred             ccC-CCCCCCCcCCC--------cCccHHHHHHHHhhhHHHHhhh-ccHHHHHHHHHHHHHHHHHHHHHHhHhccCCChh
Q 020144           83 MTR-VPWGSLESVGD--------QSEYVNGINMILTSSIPVLGSL-LSPIYFQFFLDKLASSLGPRFYANIFKCKHISET  152 (330)
Q Consensus        83 m~~-~nW~~~e~VgD--------~S~YV~~i~~~L~~~~~~i~~~-L~~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis~~  152 (330)
                      ..+ ..|..++...+        .|+-...+.+.|+..+..+... |+...|+.+...+++.+..-+++.|+.....+..
T Consensus       538 Y~k~s~W~s~~~~~~~~~~~~lspSaEL~~~L~~L~~~L~~L~~~lL~~~~f~~IwR~ia~~Ld~yL~e~IL~~nkFS~~  617 (706)
T 3fhn_A          538 YFKISTWSTLEMSVDENIGPSSVPSAELVNSINVLRRLINKLDSMDIPLAISLKVKNELLNVIVNYFTESILKLNKFNQN  617 (706)
T ss_dssp             HHHCCGGGTCCCC------CCCCCCGGGHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHTTTTTSCBCHH
T ss_pred             HhCcccCcccCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHH
Confidence            888 57987654433        2777888999999999999998 6999999999999999999999999999999999


Q ss_pred             hHhhHHhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCchhHHHHHH--hhCCCCCHHHHHHHHh
Q 020144          153 GAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVADTYR--ALLPEGTPMEFQRILE  230 (330)
Q Consensus       153 gaeQLLLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~e~~v~~Y~--~L~~d~S~~~FqkIL~  230 (330)
                      ||.|+..|+..|...|. +|..         +   ....|.++.-.|++|.-|.+.=.+.|.  ..++.+...++...+.
T Consensus       618 Ga~Qf~~D~~~L~~v~~-lp~~---------~---~~~~~~~L~E~l~LL~L~~d~~~~~f~~~~y~~~~~~~~l~~~~~  684 (706)
T 3fhn_A          618 GLNQFLHDFKSLSSILS-LPSH---------A---TNYKCMSLHELVKILKLKYDPNNQQFLNPEYIKTGNFTSLKEAYS  684 (706)
T ss_dssp             HHHHHHHHHHHHHTTSC-CCTT---------C---CCHHHHHHHHHHHHHGGGGCGGGTTTTSHHHHHHCCCSHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhc-CCCc---------c---hhhHHHHHHHHHHHcCCCCCcchhhHHHHHHHccCChHHHHHhcC
Confidence            99999999999998876 6641         1   344788888999999888643222222  3335677789999999


Q ss_pred             hcCCCHHHHHHHH
Q 020144          231 LKGLKKADQQTIL  243 (330)
Q Consensus       231 LKGl~k~eq~~ll  243 (330)
                      +|-++-+|.+..|
T Consensus       685 i~~l~~~~i~d~l  697 (706)
T 3fhn_A          685 IKYLKDTKIQDAL  697 (706)
T ss_dssp             CSSSCHHHHHHHH
T ss_pred             cccCCHHHHHHHH
Confidence            9999998866543

>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}

Probab=98.34  E-value=2.5e-05  Score=73.03  Aligned_cols=217  Identities=14%  Similarity=0.266  Sum_probs=161.1

Q ss_pred             hhhhhhhcccHHHHHHHHHHHHHHHHHhhhhhccCC---------c-----ccchhhhHHHHHHHHHHHHHH-HHHhhhc
Q 020144           12 ERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADG---------V-----DMSEVQDEFSAVITKALVTLV-LGLETKF   76 (330)
Q Consensus        12 ~~~ic~IINTADYC~~Ti~qLeekl~e~id~~~ke~---------I-----df~~e~D~F~~visk~I~~LV-~~le~~l   76 (330)
                      +..-|..||+.|-|.+-+.+|-..+.+.+...|...         |     +|.+..+.|.++++.||+.|. +.+-.++
T Consensus        19 ~~~Flv~LNnld~s~eyi~rL~~~l~~~l~~~Fp~~~d~~~~~~kv~~~l~~l~~~~~k~~~ll~~gi~~Lf~~~ikprL   98 (263)
T 3hr0_A           19 KMSFLVTLNNVEVCSENISTLKKTLESDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFRDLLQEGLTELNSTAIKPQV   98 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             HhhHhheeccHHHHHHHHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            344678899988888888877666665555544332         1     344555678899999999998 5788999


Q ss_pred             hHHhhcccCCCCCCCCc----CCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhccCCChh
Q 020144           77 DNEMAGMTRVPWGSLES----VGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISET  152 (330)
Q Consensus        77 e~a~~~m~~~nW~~~e~----VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~kpis~~  152 (330)
                      .|.+..+..++..--|.    .+..-+++..+...+...+.-++.+|.+..|..+..-+++.++..+=..|.+ +++++.
T Consensus        99 r~~l~~f~~~~y~l~eee~~~~e~~d~~~~~F~~~w~~ll~p~k~~Lt~~~y~~Ll~~~~~~la~~lE~~i~~-~~fn~l  177 (263)
T 3hr0_A           99 QPWINSFFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSLVAVELEKVVLK-STFNRL  177 (263)
T ss_dssp             HHHHHGGGGSCBSCCHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTT-CCBCHH
T ss_pred             HHHHHHHhcccccCCHhHHhhhhcccHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHh-CCcCch
Confidence            99998888876653211    0112257889999999999999999998889999988888877776666666 779999


Q ss_pred             hHhhHHhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCc-hhHHHHHHhhCC----CCCHHHHHH
Q 020144          153 GAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPV-DSVADTYRALLP----EGTPMEFQR  227 (330)
Q Consensus       153 gaeQLLLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~-e~~v~~Y~~L~~----d~S~~~Fqk  227 (330)
                      ||=||=-|+..|-..+.....          |.  |...|.|+-.|.-+|..-. |...+-|..-.+    .-|+.+=.+
T Consensus       178 Gal~LdrDvr~li~~~~~~~~----------~~--lRekF~RL~QI~~lLnle~~eev~d~~~~~~~~~~W~Ls~~E~r~  245 (263)
T 3hr0_A          178 GGLQFDKELRSLIAYLTTVTT----------WT--IRDKFARLSQMATILNLERVTEILDYWGPNSGPLTWRLTPAEVRQ  245 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSC----------TT--HHHHTHHHHHHHHHHTCSSGGGGGGTSGGGGTTCCCCSCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhccc----------hh--hhHHHHHHHHHHHHHcCCChHHHHHHhcccCCCccccCCHHHHHH
Confidence            999999999999999966432          33  7899999999999997653 333222222111    368889999


Q ss_pred             HHhhc-CCCHHHHHH
Q 020144          228 ILELK-GLKKADQQT  241 (330)
Q Consensus       228 IL~LK-Gl~k~eq~~  241 (330)
                      ++.+| +.+..+...
T Consensus       246 il~lRvDf~~e~I~~  260 (263)
T 3hr0_A          246 VLALRIDFRSEDIKR  260 (263)
T ss_dssp             HHTTBTTSCHHHHHH
T ss_pred             HHHhhccCCHHHHHh
Confidence            99999 777777654

>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}

Probab=98.20  E-value=9.7e-06  Score=77.96  Aligned_cols=178  Identities=18%  Similarity=0.217  Sum_probs=134.7

Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCCCCCCcC
Q 020144           15 ICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESV   94 (330)
Q Consensus        15 ic~IINTADYC~~Ti~qLeekl~e~id~~~ke~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW~~~e~V   94 (330)
                      +=++||+ +|...-...||+-+......+-..  .+ ...+.|-+..+.|-+.+...+..+++.-+ ++...||..-+.-
T Consensus       140 ~Qi~iNl-~~le~ac~~le~~l~~~~~~~~~~--~l-~a~~~f~~~r~~Ae~~I~~~v~~KIDdfl-~la~yDW~~~~~~  214 (325)
T 2a2f_X          140 IQIIIDT-QYLEKAGPFLDEFVCHMTNTERSV--SQ-TPSAMFHVARQDAEKQVGLRICSKIDEFF-ELSAYDWLLVEPP  214 (325)
T ss_dssp             HHHHHHH-HHHHTTHHHHHHHHHHHHTCCC----------CCSCCCTTHHHHHHHHHHHHHHHHHH-TTCCTTCC----C
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHhCCCccc--ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccCCCCCCCC
Confidence            3346665 455788888888888765443222  23 25677888888899999999999999999 9999999998889


Q ss_pred             CCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhHhc--cCCChhhHhhHHhhHHHHHHHHhhCC
Q 020144           95 GDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANIFKC--KHISETGAQQMLLDTQAVKTILLDIP  172 (330)
Q Consensus        95 gD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I~k~--kpis~~gaeQLLLD~~sLK~~Ll~LP  172 (330)
                      ++.|.||.++...|+..+. ....|++......|-.....+..++++-+..-  |.|++.|.+|+-+|+.-+..+.-+.|
T Consensus       215 ~~ps~yi~dli~fL~~~f~-sl~~LP~~v~~~~~~~a~~his~~l~~~Ll~~~vk~in~~av~~~~~Dv~~lE~fa~~~~  293 (325)
T 2a2f_X          215 GIASAFITDMISYLKSTFD-SFAFKLPHIAQAACRRTFEHIAEKIYSIMYDEDVKQISTGALTQINLDLMQCEFFAASEP  293 (325)
T ss_dssp             CSCCHHHHHHHHHHHHHHH-TTTTTSHHHHHHHHHHHHHHHHHHHHHHHTC------CCTTHHHHHHHHHHHHHHHTTCS
T ss_pred             CCccHHHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999 57788999999999999999999999998854  99999999999999999999998866


Q ss_pred             CCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCC
Q 020144          173 SLGRQTSNAASYTKFVSREMSKAEALLKVILSP  205 (330)
Q Consensus       173 ~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP  205 (330)
                      ..+-.       ...+...|..+..++-++++-
T Consensus       294 v~~l~-------~~~L~~~F~eLrQli~Ll~~~  319 (325)
T 2a2f_X          294 VPGLK-------EGELSKYFLRNRQLLDLLILE  319 (325)
T ss_dssp             SSSCC-------SSTTGGGGHHHHHHHHHHHCC
T ss_pred             CCCcc-------cchHHHHHHHHHHHHHHHHhh
Confidence            54321       122456677777888877765

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}

Probab=97.05  E-value=0.0049  Score=59.46  Aligned_cols=191  Identities=14%  Similarity=0.233  Sum_probs=116.5

Q ss_pred             hhhhhhcccHHHHHHHHHHHHHHHH-HhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccC------
Q 020144           13 RVICYIVNSAEYCHKTSGDLAESVS-KIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTR------   85 (330)
Q Consensus        13 ~~ic~IINTADYC~~Ti~qLeekl~-e~id~~~ke~Idf~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~------   85 (330)
                      ...|++||--+|....+++|.+.+. +.+++...+  -+++-+.....++......+...+..+++...++|..      
T Consensus       116 ~~~Cv~lNNie~lR~~L~~l~~~l~~~~l~~~~~~--~~~~lq~~l~~vl~~l~~~~~~~~~~~i~~~v~~m~~~l~~i~  193 (341)
T 3swh_A          116 KVPCILMNNTQQLRVQLEKMFEAMGGKELDAEASG--TLKELQVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQVK  193 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTTTSCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCC
T ss_pred             cchhhhcccHHHHHHHHHHHHHhcchhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            5689999999999999988887662 111111111  1233344555555555555555666666666666541      


Q ss_pred             -------CCCCCCCcCCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHh-------------Hh
Q 020144           86 -------VPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYANI-------------FK  145 (330)
Q Consensus        86 -------~nW~~~e~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcDKlv~~fi~~f~~~I-------------~k  145 (330)
                             ..|+..  -.+-+.-+.-+...|.+....+...+.+..|..+...+-..++..+...|             -+
T Consensus       194 ~~~~~~~~~~~~~--~~~~~~ai~PLm~yLd~~L~~l~~~L~~~~f~rvL~~lW~~~l~~l~~~i~lP~~~~~~~~~~~~  271 (341)
T 3swh_A          194 GTGNVPASACSSV--AQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVR  271 (341)
T ss_dssp             -----------CH--HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCSSSCC---
T ss_pred             ccccCCccccccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhhHhhhcc
Confidence                   123211  11335567778888999999999999999999999999999999888876             11


Q ss_pred             --ccCCChhhHhhHHhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHH--hHHHHHHHhhHhcCCchhHHHHHHh
Q 020144          146 --CKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSR--EMSKAEALLKVILSPVDSVADTYRA  215 (330)
Q Consensus       146 --~kpis~~gaeQLLLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~--~~~klE~lLKvL~sP~e~~v~~Y~~  215 (330)
                        -|++++--.+.|..+.+.|+.+|+.    +++.- |   ...+.+  +...++.+|.+-..+.+.+++.|..
T Consensus       272 ~~~r~~~~~~~~~l~~~L~~L~~fFhA----~G~GL-~---~~~Leks~~~~~l~~~L~L~~~~T~~LI~~f~~  337 (341)
T 3swh_A          272 EEAKSLTPKQCAVVELALDTIKQYFHA----GGVGL-K---KTFLEKSPDLQSLRYALSLYTQATDLLIKTFVQ  337 (341)
T ss_dssp             -------CTTHHHHHHHHHHHHHHHHG----GGTSC-C---HHHHHTCHHHHHHHHHHHHC-------------
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHhcc----CCCCC-C---HHHHccChhHHHHHHHHHHhcCCHHHHHHHHHh
Confidence              3566666778899999999999974    12221 1   355644  5889999999999999888888764

>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A

Probab=97.03  E-value=0.018  Score=49.04  Aligned_cols=120  Identities=15%  Similarity=0.169  Sum_probs=104.0

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHhhhchHHhhcccCCCCCCCCcCCCcCccHHHHHHHHhhhHHHHhhhccHHHHHHHHH
Q 020144           50 MSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFLD  129 (330)
Q Consensus        50 f~~e~D~F~~visk~I~~LV~~le~~le~a~~~m~~~nW~~~e~VgD~S~YV~~i~~~L~~~~~~i~~~L~~~Y~~~fcD  129 (330)
                      |+.....|.+.++.--.-||..+.......++     +|..-  ....|+||.+|.+.+..--..+..+|++.=.+.+..
T Consensus        10 fDkv~rdy~eH~~eI~~KLv~Im~~r~~~~l~-----~Wd~k--~pvpS~~m~tl~Ke~~kLH~~Ls~~LP~~~v~~Im~   82 (141)
T 3n1e_A           10 FDHITKDYHDHIAEISAKLVAIMDSLFDKLLS-----KYEVK--APVPSPCFRNICKQMTKMHEAIFDLLPEEQTQMLFL   82 (141)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCCC--SSSSCHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhccC--CCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence            67777888888888888888888877776654     89752  346999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhHhccCCChhhHhh--HHhhHHHHHHHHhhCCCCCC
Q 020144          130 KLASSLGPRFYANIFKCKHISETGAQQ--MLLDTQAVKTILLDIPSLGR  176 (330)
Q Consensus       130 Klv~~fi~~f~~~I~k~kpis~~gaeQ--LLLD~~sLK~~Ll~LP~~~~  176 (330)
                      ++-.+|-.++-.++-++..-++.|.+.  ++-|+.-..+.|.+|+..+.
T Consensus        83 ~Vf~~fk~~l~~~~~~~~i~~~~G~q~g~v~~Dv~ff~~~L~~L~g~~d  131 (141)
T 3n1e_A           83 RINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLKD  131 (141)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSSSSHHHHHHHHHHHHHHHHHHTSTTCTT
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCCcccchHHHHHHHHHHHHhcccCCCCc
Confidence            999999999999999998888888887  78999999999999998764

>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae}

Probab=81.72  E-value=40  Score=32.78  Aligned_cols=165  Identities=10%  Similarity=0.062  Sum_probs=109.1

Q ss_pred             hhhHHHHHHH----HHHHHHHHHHhhhchHHhhcccCCCCCCCCcCCCcCccHHHHHHHHhhhHHHHhh-hccHHHHHHH
Q 020144           53 VQDEFSAVIT----KALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGS-LLSPIYFQFF  127 (330)
Q Consensus        53 e~D~F~~vis----k~I~~LV~~le~~le~a~~~m~~~nW~~~e~VgD~S~YV~~i~~~L~~~~~~i~~-~L~~~Y~~~f  127 (330)
                      -+..|.++.-    +--+.+++.++..+.+.+-.|........-. .+.+..+..|.+.|.......+. .+.+.....+
T Consensus       137 ~r~~l~~L~~~~~e~IY~~~i~~lkk~L~~ilP~~~~~~~~k~~~-~~~~~s~~~Il~~L~~~~~~L~~~~V~p~li~Ql  215 (386)
T 3mmi_A          137 YLNDLENETLKVFDKIYSTWLVKFMKHASAHIEIFDMVLNEKLFK-NSGDEKFAKLFTFLNEFDAVLCKFQVVDSMHTKI  215 (386)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTCGGGSS-SCCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhcccccccccccccC-CCCccCHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence            3444444444    4455666667777666554443322221111 24566799999999999999888 6689999999


Q ss_pred             HHHHHHHHHHHHHHHhHh-ccCCChhhHhhHHhhHHHHHHHHhhCCCCCCCCCCchhhHHHHHHhHHHHHHHhhHhcCCc
Q 020144          128 LDKLASSLGPRFYANIFK-CKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPV  206 (330)
Q Consensus       128 cDKlv~~fi~~f~~~I~k-~kpis~~gaeQLLLD~~sLK~~Ll~LP~~~~~~~~~~sY~k~V~~~~~klE~lLKvL~sP~  206 (330)
                      +..+-..+.....|+|.- -.-.+---|.|+..-++.|..-..+  ..+      .     ...++..+-...++|+.|.
T Consensus       216 fsQLF~fIna~lFN~LLlRr~~cs~s~G~qIr~NLs~LEeW~~~--~l~------~-----a~~~L~~L~QA~~LLQ~~K  282 (386)
T 3mmi_A          216 FNDTLKYLNVMLFNDLITKCPALNWKYGYEVDRNIERLVSWFEP--RIE------D-----VRPNLIQIIQAVKILQLKI  282 (386)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHHHTT--TSS------C-----CGGGGHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHhHHHHHHHHccCcccCcchHHHHHhhHHHHHHHHHh--ccH------H-----HHHHHHHHHHHHHHHccCC
Confidence            999999999999999854 3445777899999999999988876  221      1     1146788888888998884


Q ss_pred             h--hHHHHHHhhCCCCCHHHHHHHHhh
Q 020144          207 D--SVADTYRALLPEGTPMEFQRILEL  231 (330)
Q Consensus       207 e--~~v~~Y~~L~~d~S~~~FqkIL~L  231 (330)
                      .  .-+++-..+.+.-|+...++||.+
T Consensus       283 ~t~~Di~~i~~~C~~Lsp~QL~kIL~~  309 (386)
T 3mmi_A          283 SNLNEFKLLFDFWYALNPAQIQAILLK  309 (386)
T ss_dssp             CCHHHHHHHHTTCCSSCHHHHHHHHHT
T ss_pred             CCHHHHHHHHHhcccCCHHHHHHHHHh
Confidence            2  222333344444455555555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00