Citrus Sinensis ID: 020639

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320---
Protein Sequence
MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEccccccccccccccccEEEcccEEEEEcccccEEEEEEEccccccEEEEEEEEEEEEcccEEEEEEEEEEEcccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccccccccEEEEEEEcccEEEEEcccccEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccHHHcccccccccccccccccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccHHHccccEEEEEEcHHHHHHHHcccccccEEccEEEEEEEccccEEEEEEEEEcccEEEEEEEEEEEEEccccEEEEEEEEEEEccHHHHccccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEccccEEEcccccEEEEEEEcccccccc
Coil and Loop (DISEMBL)
masisqtnqfpcktlsqnpphnqftskpsilplnsvRISRSLAKKSFLSiqgftrarplvltraadddewgpekekeeggalavaeeespkevtEIDNLKKALVDsfygtdrglnatSETRAEIVELITQLeaknptpaptEALTLLNAKWILVYTSFsglfpllsrgtlplarVEEISQTidsenftvqnsirfagplattsistnakfevrspkrvqikfeegiigtpqvtdslvipenveflgqkidlspfkgilSSVQDTASSVAktissqpplkfsisnSNAQSWLLTTYLdedlrisradaGSVFVFIkegspllmp
Flexible Loop (DISEMBL)
masisqtnqfpcktlsqnpphNQFTSKPSILPLNSVRISRSLAKKsflsiqgftrarplvltraadddewgpekekeeggalavaeeespkevteIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQleaknptpAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQtidsenftvqNSIRFAgplattsistnakfevrspKRVQIKfeegiigtpqvtdsLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTissqpplkfsisnsNAQSWLLTTYLDEDLRISRADAGSVFVFikegspllmp
Low Complexity Region (SEG)
MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAdddewgpekekeeggalavaeeeSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP
Disordered region (IsUnstruct)
*************************************I**SLAKKSFLSIQGFTRARPLVLT***********************************NLKKALVDSFYGTDRGLNATSETRAEIVELITQLEA******PTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILS**************************NAQSWLLTTYLDEDLRISRADAGSVFVFIK********
Disordered Region (DISOPRED)
*****************************************************************************************************ALVDSFYGTDRGLNA*SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISS**********SNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSP****
Disordered Region (DISEMBL)
*********FPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAD****************************EIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP
Disordered Region (DISPRO)
********************************************************************************************VTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	323	2.2.26 [Sep-21-2011]
Q9ZWQ8	323	Plastid-lipid-associated	N/A	no	1.0	1.0	0.987	0.0
P80471	326	Light-induced protein, ch	N/A	no	1.0	0.990	0.723	1e-125
O99019	326	Light-induced protein, ch	N/A	no	1.0	0.990	0.714	1e-123
Q96398	322	Chromoplast-specific caro	N/A	no	0.972	0.975	0.694	1e-122
Q94KU6	319	Plastid lipid-associated	N/A	no	0.978	0.990	0.647	1e-112
O49629	310	Probable plastid-lipid-as	yes	no	0.956	0.996	0.632	1e-109
O81439	318	Probable plastid-lipid-as	no	no	0.969	0.984	0.625	1e-108
Q94FZ9	327	Plastid lipid-associated	N/A	no	0.950	0.938	0.615	1e-100
Q6K439	319	Probable plastid-lipid-as	yes	no	0.826	0.836	0.671	1e-94
O82291	376	Probable plastid-lipid-as	no	no	0.764	0.656	0.465	5e-60

>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/323 (98%), Positives = 322/323 (99%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
           MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60

Query: 61  LTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120
           LTRAADDDEWGPEKEKE GGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET
Sbjct: 61  LTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120

Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180
           RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180

Query: 181 TIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPE 240
           TIDSENFTVQNSI+FAGPLATTSISTNAKFEVRSPKRVQIKFEEG+IGTPQVTDSLV+PE
Sbjct: 181 TIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPE 240

Query: 241 NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL 300
           NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL 300

Query: 301 RISRADAGSVFVFIKEGSPLLMP 323
           RISRADAGSVFVFIKEGSPLLMP
Sbjct: 301 RISRADAGSVFVFIKEGSPLLMP 323

Citrus unshiu (taxid: 55188)

>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2

 Score =  446 bits (1148), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/326 (72%), Positives = 270/326 (82%), Gaps = 3/326 (0%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
           MASIS  NQ PCKTL     +++ TSK S LP++S            +S++ FT  +P  
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60

Query: 61  LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
             +A +   +DEWGPE E+   G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
           SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
           ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
           +PENVEFLGQKIDLSPFKG+++SVQDTASSVAK+ISSQPP+KF I+N+NAQSWLLTTYLD
Sbjct: 241 LPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLD 300

Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
           ++LRISR DAGSVFV IKEGSPLL P
Sbjct: 301 DELRISRGDAGSVFVLIKEGSPLLKP 326

Required for normal plant growth. May be both photoprotective and play an ancillary role in photosynthesis. May structurally stabilize thylakoids during osmotic and oxidative stress.

Solanum tuberosum (taxid: 4113)

>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1

 Score =  442 bits (1137), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/326 (71%), Positives = 269/326 (82%), Gaps = 3/326 (0%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
           MASIS  NQ PCKTL     +++ TSK S LP++S        +   +S++ FT  +P  
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60

Query: 61  LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
             +A +   +DEWGPE E+   G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
           SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
           ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
           +PENVEFLGQKID+SPFKG+++SVQDTASSV K+ISSQPP+KF I+N+NAQSWLLTTYLD
Sbjct: 241 LPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLD 300

Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
           ++LRI R DAGSVFV IKEGSPLL P
Sbjct: 301 DELRIPRGDAGSVFVLIKEGSPLLKP 326

Required for normal plant growth. May be both photoprotective and play an ancillary role in photosynthesis. May structurally stabilize thylakoids during osmotic and oxidative stress.

Solanum demissum (taxid: 50514)

>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1

 Score =  437 bits (1123), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/327 (69%), Positives = 266/327 (81%), Gaps = 13/327 (3%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPL 59
           MA +SQ NQ PCKTL+ NPP  Q TSKPS+ P+ S+   +R+ A KS +S+      RP 
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISV------RPA 54

Query: 60  VLTRAA-DDDEWGPEKEKEEGG----ALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGL 114
              RA  +DDEWG +K+++ G     A+A  EEE P E +EI  LKKALVDSFYGTDRGL
Sbjct: 55  FKVRAVLNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGL 114

Query: 115 NATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLAR 174
             + +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL YT+F+GLFPLLSR  LPL +
Sbjct: 115 RVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVK 173

Query: 175 VEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTD 234
           VEEISQTIDSEN TVQNS++F+GPLATTSI+TNAKFEVRSP RV IKFEEG+IGTPQ+TD
Sbjct: 174 VEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTD 233

Query: 235 SLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTT 294
           S+VIP+NV+FLGQKID +PF GI+SS+QDTAS+VAKTISSQPP+KFSISN+  +SWLLTT
Sbjct: 234 SIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTT 293

Query: 295 YLDEDLRISRADAGSVFVFIKEGSPLL 321
           YLDEDLRISR D GSVFV +KEGS  L
Sbjct: 294 YLDEDLRISRGDGGSVFVLLKEGSSFL 320

May be involved in carotenoid sequestration within chromoplasts.

Cucumis sativus (taxid: 3659)

>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1

 Score =  404 bits (1039), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/326 (64%), Positives = 258/326 (79%), Gaps = 10/326 (3%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKP--SILPLNSVRISRSLAKKSFLSIQGFTRARP 58
           MA++   NQFPCKT  Q+  +++  SKP  S++P+++      L ++       F  +R 
Sbjct: 1   MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSA------LTRRPSFPPGEFAVSRS 54

Query: 59  LVLTRAAD-DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
               R  D +DE  PE  +  G AL +AEE + + V E + LK++LVDS YGTDRGL+A+
Sbjct: 55  DFRVRVIDAEDELDPETSEGGGSALLMAEE-AIESVEETEVLKRSLVDSLYGTDRGLSAS 113

Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
           SETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL YTSF GLFPLLSRG +PL +V+E
Sbjct: 114 SETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDE 173

Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
           ISQTIDS+NFTV+NS+ FAGPLATTSISTNAKFE+RSPKRVQIKFEEG+IGTPQ+TDS+ 
Sbjct: 174 ISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIE 233

Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
           IPE VEFLGQKIDL+P +G+L+SVQDTA+SVA+TISSQPPLKFS+   +AQSWLLTTYLD
Sbjct: 234 IPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLD 293

Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
           +D+RISR D GSVFV IKEGSPLL P
Sbjct: 294 KDIRISRGDGGSVFVLIKEGSPLLNP 319

May stabilize the accumulated carotenoid structures.

Brassica campestris (taxid: 3711)

>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1

 Score =  394 bits (1013), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/324 (63%), Positives = 249/324 (76%), Gaps = 15/324 (4%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPL 59
           MA++  + QF C+T     P+++  SKP  L P+ S+ I R +     +++      R +
Sbjct: 1   MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRV 55

Query: 60  VLTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSE 119
              RA D  E G         +  +A EE+ ++V E + LK++LVDS YGTDRGL+A+SE
Sbjct: 56  FKVRATDTGEIG---------SALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSE 106

Query: 120 TRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEIS 179
           TRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF  LFPLLSRG +PL +V+EIS
Sbjct: 107 TRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEIS 166

Query: 180 QTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIP 239
           QTIDS+NFTVQNS+RFAGPL T SISTNAKFE+RSPKRVQIKFE+G+IGTPQ+TDS+ IP
Sbjct: 167 QTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIP 226

Query: 240 ENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDED 299
           E VE LGQKIDL+P +G+L+SVQDTASSVA+TISSQPPLKFS+   NAQSWLLTTYLD+D
Sbjct: 227 EYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKD 286

Query: 300 LRISRADAGSVFVFIKEGSPLLMP 323
           +RISR D GSVFV IKEGSPLL P
Sbjct: 287 IRISRGDGGSVFVLIKEGSPLLNP 310

Arabidopsis thaliana (taxid: 3702)

>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1

 Score =  390 bits (1002), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/328 (62%), Positives = 253/328 (77%), Gaps = 15/328 (4%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPL 59
           MA++    QFPCKTL+ +  + +  SK P +LP+NS+       ++S +   G +  RP 
Sbjct: 1   MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSIN------RRSEI---GVSVHRPD 51

Query: 60  VLTRAAD-DDEWGP---EKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLN 115
              RA D DDEWG    E+       ++VA++ + + V E + LK++L DS YGTDRGL+
Sbjct: 52  FKIRATDIDDEWGQDGVERVFASSSTVSVADK-AIESVEETERLKRSLADSLYGTDRGLS 110

Query: 116 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 175
            +S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF GLFPLLSR   PL +V
Sbjct: 111 VSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKV 170

Query: 176 EEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDS 235
           +EISQTIDS++FTVQNS+RFAGP +TTS STNAKFE+RSPKRVQIKFE+G+IGTPQ+TDS
Sbjct: 171 DEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDS 230

Query: 236 LVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 295
           + IPE+VE LGQKIDL+P KG+L+SVQDTASSVA+TIS+QPPLKFS+ + N QSWLLTTY
Sbjct: 231 IEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTY 290

Query: 296 LDEDLRISRADAGSVFVFIKEGSPLLMP 323
           LD+DLRISR D GSV+V IKEGS LL P
Sbjct: 291 LDKDLRISRGDGGSVYVLIKEGSSLLNP 318

Arabidopsis thaliana (taxid: 3702)

>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1

 Score =  363 bits (933), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/328 (61%), Positives = 242/328 (73%), Gaps = 21/328 (6%)

Query: 8   NQFPCKT-LSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRAR-------PL 59
           +QF CKT ++ +   +  +  P +LP+N +    ++ +  F       RA        P 
Sbjct: 9   SQFTCKTPITSSSTSSFQSKSPILLPINPINRRIAVHRHDFK-----VRASDVNDEWGPD 63

Query: 60  VLTRAAD-DDEWGPEKEKEEGGALAVAEE---ESPKEVTEIDNLKKALVDSFYGTDRGLN 115
              R  D DDEWGPE     G   +VAE+   E+ +   E + LK+ L  S YGTDRGL+
Sbjct: 64  SKGRGGDVDDEWGPEI----GLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLS 119

Query: 116 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 175
           A+SETRAEI ELITQLE+KNP PAP EAL LLN KWILVYTSF GLFPLLSR   PL +V
Sbjct: 120 ASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKV 179

Query: 176 EEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDS 235
           +EISQTIDS++FTV NS+RFA PLATTS+STNAKFEVRSPKRVQ+KFE+G+IGTPQ+TDS
Sbjct: 180 DEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDS 239

Query: 236 LVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 295
           + IPE VE LGQKIDL+P KG+L+SVQDTASSVA+TISSQPPLKFS+   +AQSWLLTTY
Sbjct: 240 IEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLTTY 299

Query: 296 LDEDLRISRADAGSVFVFIKEGSPLLMP 323
           LD+DLRISR D GSVFV I+EGS LL P
Sbjct: 300 LDKDLRISRGDGGSVFVLIREGSSLLNP 327

May modulate the action of carotenoids.

Brassica campestris (taxid: 3711)

>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1

 Score =  347 bits (889), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 184/274 (67%), Positives = 213/274 (77%), Gaps = 7/274 (2%)

Query: 55  RARPLVLTRAA----DDDEWGPEKEKEEGGALAVAEEESPKE--VTEIDNLKKALVDSFY 108
           RA P  LT  A     +DEWG E   ++GGA A   E        +E+  LK  L ++ Y
Sbjct: 45  RAAPRRLTARAVAGDAEDEWGKEPAADQGGAAAAVAEAPADVPVTSEVAELKAKLKEALY 104

Query: 109 GTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRG 168
           GT+RGL A+SETRAE+VELITQLEA+NPTPAPTEALTLLN KWIL YTSFS LFPLL  G
Sbjct: 105 GTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSG 164

Query: 169 TLP-LARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGII 227
           +LP L +VEEISQTIDSENFTVQN I+F+GPLATTS+STNAKFEVRSPKRVQIKF+EGII
Sbjct: 165 SLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGII 224

Query: 228 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNA 287
           GTPQ+TDS+V+PE  E  GQ IDL+P KGI SS+++ ASSVA+TIS QPPLK  I   NA
Sbjct: 225 GTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNA 284

Query: 288 QSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 321
           +SWLLTTYLD++LRISR D  S+FV  KEGS LL
Sbjct: 285 ESWLLTTYLDDELRISRGDGSSIFVLFKEGSTLL 318

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1

 Score =  231 bits (589), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 121/260 (46%), Positives = 165/260 (63%), Gaps = 13/260 (5%)

Query: 66  DDDEWGPE----KEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETR 121
           ++DEWG E     E + G   AV++            LK+ L DS YGT+ G  A SE R
Sbjct: 124 NEDEWGGEIGGETEADAGNGSAVSDPTW--------ELKRCLADSVYGTELGFKAGSEVR 175

Query: 122 AEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQT 181
           AE++EL+ QLEA NPTPAP E   LL+  W+L+YT+FS L PLL+ G+ PL +V+ ISQ+
Sbjct: 176 AEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQS 235

Query: 182 IDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPEN 241
           ID+ N  + NS   + P A  S S  A FEVRSP R+++ F+EG +  P +  S+ +PE+
Sbjct: 236 IDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPES 295

Query: 242 VEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLR 301
           V   GQ+I LS  K  L+ +QD A+++++ +S QPPLK     +   SWLLTTYLD+DLR
Sbjct: 296 VGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLR 355

Query: 302 ISRADAGSVFVFIKEGSPLL 321
           ISR D G +FV  +EGS LL
Sbjct: 356 ISRGDGG-LFVLAREGSSLL 374

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	323
62900641	323	RecName: Full=Plastid-lipid-associated p	1.0	1.0	0.987	0.0
255566853	321	Plastid-lipid-associated protein, chloro	0.969	0.975	0.753	1e-131
350539549	326	plastid lipid associated protein CHRC [S	1.0	0.990	0.723	1e-128
224118150	329	predicted protein [Populus trichocarpa]	0.996	0.978	0.727	1e-126
118489702	329	unknown [Populus trichocarpa x Populus d	0.996	0.978	0.727	1e-125
147787229	281	hypothetical protein VITISV_012048 [Viti	0.823	0.946	0.826	1e-124
22261807	326	RecName: Full=Light-induced protein, chl	1.0	0.990	0.723	1e-123
25453087	326	RecName: Full=Light-induced protein, chl	1.0	0.990	0.714	1e-122
449434000	322	PREDICTED: chromoplast-specific caroteno	0.972	0.975	0.694	1e-120
356555702	306	PREDICTED: plastid-lipid-associated prot	0.823	0.869	0.809	1e-116

>gi|62900641|sp|Q9ZWQ8.1|PAP_CITUN RecName: Full=Plastid-lipid-associated protein, chloroplastic; AltName: Full=CitPAP; Flags: Precursor gi|3928760|dbj|BAA34702.1| homolog to plastid-lipid-associated protein [Citrus unshiu]

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/323 (98%), Positives = 322/323 (99%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
           MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60

Query: 61  LTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120
           LTRAADDDEWGPEKEKE GGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET
Sbjct: 61  LTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120

Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180
           RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180

Query: 181 TIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPE 240
           TIDSENFTVQNSI+FAGPLATTSISTNAKFEVRSPKRVQIKFEEG+IGTPQVTDSLV+PE
Sbjct: 181 TIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPE 240

Query: 241 NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL 300
           NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL 300

Query: 301 RISRADAGSVFVFIKEGSPLLMP 323
           RISRADAGSVFVFIKEGSPLLMP
Sbjct: 301 RISRADAGSVFVFIKEGSPLLMP 323

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566853|ref|XP_002524410.1| Plastid-lipid-associated protein, chloroplast precursor, putative [Ricinus communis] gi|223536371|gb|EEF38021.1| Plastid-lipid-associated protein, chloroplast precursor, putative [Ricinus communis]

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/324 (75%), Positives = 273/324 (84%), Gaps = 11/324 (3%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
           MASISQ NQFPCKTLS  P +++FTS+PS+    S++ + S+ + +       T  RP+ 
Sbjct: 1   MASISQLNQFPCKTLSTPPCNSKFTSRPSVF---SIKTTTSICRPTL-----STGTRPVF 52

Query: 61  LTRAAD-DDEWGPEKEKEEGGALAVAEEES--PKEVTEIDNLKKALVDSFYGTDRGLNAT 117
             RA D +DEWGP+ E           EE   P EVTEID+LKK LVDSFYGTDRGL AT
Sbjct: 53  SIRAVDAEDEWGPDYEDSAVAVAEEESEEKLKPTEVTEIDSLKKQLVDSFYGTDRGLKAT 112

Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
           SETRAEIVELITQLE+KNPT APTEALTLLN KWIL YTSFSGLFPLLSRGTLPL +VEE
Sbjct: 113 SETRAEIVELITQLESKNPTAAPTEALTLLNGKWILAYTSFSGLFPLLSRGTLPLVKVEE 172

Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
           ISQTIDSENFTVQNS++F+GPLATTSISTNAKFEVRSPKRVQIKF+EGIIGTPQ+TDS+V
Sbjct: 173 ISQTIDSENFTVQNSVQFSGPLATTSISTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIV 232

Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
           +PENVEFLGQKIDL+PFKGI++SVQDTASSVAKTISSQPPLK  ISN+NAQSWLLTTYLD
Sbjct: 233 LPENVEFLGQKIDLTPFKGIITSVQDTASSVAKTISSQPPLKIPISNNNAQSWLLTTYLD 292

Query: 298 EDLRISRADAGSVFVFIKEGSPLL 321
           EDLRISRADAGS+FV IKEGSPLL
Sbjct: 293 EDLRISRADAGSIFVLIKEGSPLL 316

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350539549|ref|NP_001234183.1| plastid lipid associated protein CHRC [Solanum lycopersicum] gi|83743301|gb|ABC42191.1| plastid lipid associated protein CHRC [Solanum lycopersicum]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/326 (72%), Positives = 270/326 (82%), Gaps = 3/326 (0%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
           MASIS  NQ PC+TL     +++ TSK S LP++S            +S++ FT  +P  
Sbjct: 1   MASISSLNQIPCRTLQITSQYSKPTSKISTLPISSTNFPSKTELHRAISVKEFTYPKPKF 60

Query: 61  LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
             +A +   +DEWGPE EK   G +AV +EE PKE +EI+ LKK L DSFYGT+RGL+A+
Sbjct: 61  TAQATNYDKEDEWGPEVEKISPGGVAVVDEEPPKEPSEIELLKKQLADSFYGTNRGLSAS 120

Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
           SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG L L RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLLLVRVEE 180

Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
           ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
           +PENVEFLGQKIDLSPFKG+++SVQDTASSVAK+ISSQPP+KF ISN+NAQSWLLTTYLD
Sbjct: 241 LPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPISNNNAQSWLLTTYLD 300

Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
           ++LRISR DAGSVFV IKEGSPLL P
Sbjct: 301 DELRISRGDAGSVFVLIKEGSPLLKP 326

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118150|ref|XP_002331570.1| predicted protein [Populus trichocarpa] gi|222873794|gb|EEF10925.1| predicted protein [Populus trichocarpa]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/330 (72%), Positives = 276/330 (83%), Gaps = 8/330 (2%)

Query: 1   MASISQTNQFPCKTLS-QNPPHNQFTS-KPSILPLNSVRISRS-----LAKKSFLSIQGF 53
           MA+ISQ NQFPCKTLS + P  + FTS +PSI+PLNS++ + +     L  +  ++ +  
Sbjct: 1   MAAISQLNQFPCKTLSSKTPLFSHFTSSRPSIIPLNSIKNNPTTNNSILKPRILVTREQP 60

Query: 54  TRARPLVLTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRG 113
           T+ R L L +A D+DE  PE E     ALA   EE  KE+ E+D LK  LVD+FYGTDRG
Sbjct: 61  TKKRNLFLVKAVDEDEGSPENEGPPV-ALAEKGEEELKELAEVDRLKGQLVDTFYGTDRG 119

Query: 114 LNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLA 173
           LNATSETRAE+VELITQLEA+NP PAPTEALTLLN KWIL YTSF+GLFPLLSRGTLPL 
Sbjct: 120 LNATSETRAEVVELITQLEARNPNPAPTEALTLLNGKWILAYTSFAGLFPLLSRGTLPLV 179

Query: 174 RVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVT 233
           +VEEISQTIDSEN TVQNS++F+GPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP++T
Sbjct: 180 KVEEISQTIDSENLTVQNSVQFSGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPKLT 239

Query: 234 DSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLT 293
           DS+ +PENVEFLGQKIDL+PF+GI+SSVQDTASSVAKTISSQPPLKFSI N NA+SWLLT
Sbjct: 240 DSIELPENVEFLGQKIDLTPFRGIISSVQDTASSVAKTISSQPPLKFSIPNRNAESWLLT 299

Query: 294 TYLDEDLRISRADAGSVFVFIKEGSPLLMP 323
           TYLD+DLRISR DAGS+FV IKEGSPLL P
Sbjct: 300 TYLDDDLRISRGDAGSIFVLIKEGSPLLTP 329

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489702|gb|ABK96652.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/330 (72%), Positives = 275/330 (83%), Gaps = 8/330 (2%)

Query: 1   MASISQTNQFPCKTL-SQNPPHNQFTS-KPSILPLNSVR----ISRSLAKKSFL-SIQGF 53
           MA+ISQ NQFPCKTL S+ P  + FTS +PS +PLNS++     + S+ K+  L + +  
Sbjct: 1   MAAISQLNQFPCKTLYSKTPLFSHFTSSRPSTIPLNSIKNNPTTNNSILKQRILVTREQP 60

Query: 54  TRARPLVLTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRG 113
            + R L L +A D+DE  PE E     ALA   EE  KE+TE+D LK  LVD+FYGTDRG
Sbjct: 61  AKKRNLFLVKAVDEDEGSPENEGPPV-ALAEKGEEELKELTEVDRLKGQLVDTFYGTDRG 119

Query: 114 LNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLA 173
           LNATSETRAE+VELITQLEA+NP PAPTEALTLLN KWIL YTSF+GLFPLLSRGTLPL 
Sbjct: 120 LNATSETRAEVVELITQLEARNPNPAPTEALTLLNGKWILAYTSFAGLFPLLSRGTLPLV 179

Query: 174 RVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVT 233
           +VEEISQTIDSEN TVQNS++F+GPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP++T
Sbjct: 180 KVEEISQTIDSENLTVQNSVQFSGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPKLT 239

Query: 234 DSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLT 293
           DS+ +PE VEFLGQKIDL+PF+GI+SSVQDTASSVAKTISSQPPLKFSI N NA+SWLLT
Sbjct: 240 DSIELPEKVEFLGQKIDLTPFRGIISSVQDTASSVAKTISSQPPLKFSIPNRNAESWLLT 299

Query: 294 TYLDEDLRISRADAGSVFVFIKEGSPLLMP 323
           TYLD+DLRISR DAGS+FV IKEGSPLL P
Sbjct: 300 TYLDDDLRISRGDAGSIFVLIKEGSPLLTP 329

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147787229|emb|CAN69132.1| hypothetical protein VITISV_012048 [Vitis vinifera]

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/271 (82%), Positives = 245/271 (90%), Gaps = 5/271 (1%)

Query: 55  RARPLVLTRAADDDEWGPEKEK--EEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDR 112
           R RP+VL R A DDEWGPEK +   EG  +AV EEE  KE+T   +LKKALVDSFYGTDR
Sbjct: 14  RGRPVVLVRTALDDEWGPEKXEPEGEGSTVAVVEEEKSKEIT---SLKKALVDSFYGTDR 70

Query: 113 GLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPL 172
           GL ATSETRAEIVELITQLEAKNPTPAPTEALTLLN KWIL YTSF+GLFPLLSRGTLPL
Sbjct: 71  GLKATSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFAGLFPLLSRGTLPL 130

Query: 173 ARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQV 232
            +VEEISQTIDSENFTVQNS++F+GPLATTSISTNAKFEVRSPKRVQIKF+EGIIGTPQ+
Sbjct: 131 VKVEEISQTIDSENFTVQNSVQFSGPLATTSISTNAKFEVRSPKRVQIKFQEGIIGTPQL 190

Query: 233 TDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLL 292
           TDS+ +PENVEFLGQ IDL+PFKG+++SVQDTASSVAKTISSQPPLKFSI NSNA+SWLL
Sbjct: 191 TDSIELPENVEFLGQNIDLTPFKGLITSVQDTASSVAKTISSQPPLKFSIPNSNAESWLL 250

Query: 293 TTYLDEDLRISRADAGSVFVFIKEGSPLLMP 323
           TTYLDEDLRISR DAGS+FV IKEGS LL+P
Sbjct: 251 TTYLDEDLRISRGDAGSIFVLIKEGSSLLVP 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22261807|sp|P80471.2|LIPC_SOLTU RecName: Full=Light-induced protein, chloroplastic; AltName: Full=Drought-induced stress protein CDSP-34; Flags: Precursor gi|2598049|emb|CAA75558.1| chloroplast drought-induced stress protein, 34 kD) [Solanum tuberosum]

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/326 (72%), Positives = 270/326 (82%), Gaps = 3/326 (0%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
           MASIS  NQ PCKTL     +++ TSK S LP++S            +S++ FT  +P  
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60

Query: 61  LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
             +A +   +DEWGPE E+   G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
           SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
           ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
           +PENVEFLGQKIDLSPFKG+++SVQDTASSVAK+ISSQPP+KF I+N+NAQSWLLTTYLD
Sbjct: 241 LPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLD 300

Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
           ++LRISR DAGSVFV IKEGSPLL P
Sbjct: 301 DELRISRGDAGSVFVLIKEGSPLLKP 326

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|25453087|sp|O99019.1|LIPC_SOLDE RecName: Full=Light-induced protein, chloroplastic; AltName: Full=C40.4; Flags: Precursor gi|4007750|emb|CAA10372.1| fibrillin [Solanum demissum]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/326 (71%), Positives = 269/326 (82%), Gaps = 3/326 (0%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
           MASIS  NQ PCKTL     +++ TSK S LP++S        +   +S++ FT  +P  
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60

Query: 61  LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
             +A +   +DEWGPE E+   G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
           SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
           ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
           +PENVEFLGQKID+SPFKG+++SVQDTASSV K+ISSQPP+KF I+N+NAQSWLLTTYLD
Sbjct: 241 LPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLD 300

Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
           ++LRI R DAGSVFV IKEGSPLL P
Sbjct: 301 DELRIPRGDAGSVFVLIKEGSPLLKP 326

Source: Solanum demissum

Species: Solanum demissum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434000|ref|XP_004134784.1| PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplast-like [Cucumis sativus] gi|449524631|ref|XP_004169325.1| PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplast-like [Cucumis sativus] gi|62899808|sp|Q96398.1|CHRC_CUCSA RecName: Full=Chromoplast-specific carotenoid-associated protein, chromoplast; Flags: Precursor gi|1523992|emb|CAA64846.1| chromoplast-specific carotenoid-associated protein, CHRC [Cucumis sativus] gi|4138857|gb|AAD05165.1| chromoplast-specific carotenoid-associated protein CHRC [Cucumis sativus]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/327 (69%), Positives = 266/327 (81%), Gaps = 13/327 (3%)

Query: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPL 59
           MA +SQ NQ PCKTL+ NPP  Q TSKPS+ P+ S+   +R+ A KS +S+      RP 
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISV------RPA 54

Query: 60  VLTRAA-DDDEWGPEKEKEEGG----ALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGL 114
              RA  +DDEWG +K+++ G     A+A  EEE P E +EI  LKKALVDSFYGTDRGL
Sbjct: 55  FKVRAVLNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGL 114

Query: 115 NATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLAR 174
             + +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL YT+F+GLFPLLSR  LPL +
Sbjct: 115 RVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVK 173

Query: 175 VEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTD 234
           VEEISQTIDSEN TVQNS++F+GPLATTSI+TNAKFEVRSP RV IKFEEG+IGTPQ+TD
Sbjct: 174 VEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTD 233

Query: 235 SLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTT 294
           S+VIP+NV+FLGQKID +PF GI+SS+QDTAS+VAKTISSQPP+KFSISN+  +SWLLTT
Sbjct: 234 SIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTT 293

Query: 295 YLDEDLRISRADAGSVFVFIKEGSPLL 321
           YLDEDLRISR D GSVFV +KEGS  L
Sbjct: 294 YLDEDLRISRGDGGSVFVLLKEGSSFL 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555702|ref|XP_003546169.1| PREDICTED: plastid-lipid-associated protein, chloroplastic-like [Glycine max]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/268 (80%), Positives = 233/268 (86%), Gaps = 2/268 (0%)

Query: 55  RARPLVLTRAA-DDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRG 113
           R R LV  RA   DDEWGPEKE+  GG +AV EE+  K  TE + LKKALVDSFYGTDRG
Sbjct: 38  RPRLLVRVRAVTSDDEWGPEKEEAYGGGVAV-EEKPTKSETETEKLKKALVDSFYGTDRG 96

Query: 114 LNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLA 173
           L ATSETRAEIVELITQLEAKNP P PT+ALTLLN KWIL YTSF+GLFPLLS GTLPL 
Sbjct: 97  LKATSETRAEIVELITQLEAKNPNPVPTDALTLLNGKWILAYTSFAGLFPLLSSGTLPLV 156

Query: 174 RVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVT 233
           +VEEISQ IDS NFTVQNS++FAGPLATTSISTNAKF+VRSPKRVQIKFEEGIIGTPQ+T
Sbjct: 157 KVEEISQIIDSLNFTVQNSVQFAGPLATTSISTNAKFDVRSPKRVQIKFEEGIIGTPQLT 216

Query: 234 DSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLT 293
           DSL IPENVEFLGQKIDL+ FKGIL+SVQDTA+SV KTISS+PPLK  ISNSNAQSWLLT
Sbjct: 217 DSLEIPENVEFLGQKIDLTLFKGILTSVQDTATSVVKTISSRPPLKIPISNSNAQSWLLT 276

Query: 294 TYLDEDLRISRADAGSVFVFIKEGSPLL 321
           TYLDE+LRISR D GSVFV IKEGS LL
Sbjct: 277 TYLDEELRISRGDGGSVFVLIKEGSSLL 304

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	323
UNIPROTKB|P80471	326	P80471 "Light-induced protein,	1.0	0.990	0.684	1e-109
UNIPROTKB|O99019	326	O99019 "Light-induced protein,	1.0	0.990	0.674	1.1e-108
TAIR|locus:2132006	310	AT4G22240 [Arabidopsis thalian	0.956	0.996	0.614	4.7e-96
TAIR|locus:2136627	318	FIB "fibrillin" [Arabidopsis t	0.972	0.987	0.602	6.8e-95
TAIR|locus:2062497	376	AT2G35490 [Arabidopsis thalian	0.687	0.590	0.502	6.8e-56
TAIR|locus:2178133	273	AT5G09820 [Arabidopsis thalian	0.470	0.556	0.256	1.7e-09
TAIR|locus:2092150	242	AT3G26070 [Arabidopsis thalian	0.275	0.367	0.301	4.3e-07
TAIR|locus:2060020	299	AT2G42130 [Arabidopsis thalian	0.640	0.692	0.255	1.9e-06
TAIR|locus:2092165	234	AT3G26080 [Arabidopsis thalian	0.191	0.264	0.349	3.2e-05
TAIR|locus:2095803	308	PGL34 "plastoglobulin 34kD" [A	0.588	0.616	0.232	5e-05

UNIPROTKB|P80471 P80471 "Light-induced protein, chloroplastic" [Solanum tuberosum (taxid:4113)]

 Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
 Identities = 223/326 (68%), Positives = 253/326 (77%)

Query:     1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
             MASIS  NQ PCKTL     +++ TSK S LP++S            +S++ FT  +P  
Sbjct:     1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60

Query:    61 LTRAAXXXXXXX---XXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
               +A                            PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct:    61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query:   118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
             SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct:   121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query:   178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
             ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct:   181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query:   238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
             +PENVEFLGQKIDLSPFKG+++SVQDTASSVAK+ISSQPP+KF I+N+NAQSWLLTTYLD
Sbjct:   241 LPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLD 300

Query:   298 EDLRISRADAGSVFVFIKEGSPLLMP 323
             ++LRISR DAGSVFV IKEGSPLL P
Sbjct:   301 DELRISRGDAGSVFVLIKEGSPLLKP 326

GO:0003674 "molecular_function" evidence=ND

GO:0006950 "response to stress" evidence=IEP

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

UNIPROTKB|O99019 O99019 "Light-induced protein, chloroplastic" [Solanum demissum (taxid:50514)]

 Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
 Identities = 220/326 (67%), Positives = 252/326 (77%)

Query:     1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
             MASIS  NQ PCKTL     +++ TSK S LP++S        +   +S++ FT  +P  
Sbjct:     1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60

Query:    61 LTRAAXXXXXXX---XXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
               +A                            PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct:    61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query:   118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
             SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct:   121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query:   178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
             ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct:   181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query:   238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
             +PENVEFLGQKID+SPFKG+++SVQDTASSV K+ISSQPP+KF I+N+NAQSWLLTTYLD
Sbjct:   241 LPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLD 300

Query:   298 EDLRISRADAGSVFVFIKEGSPLLMP 323
             ++LRI R DAGSVFV IKEGSPLL P
Sbjct:   301 DELRIPRGDAGSVFVLIKEGSPLLKP 326

GO:0003674 "molecular_function" evidence=ND

GO:0006950 "response to stress" evidence=IEP

GO:0009535 "chloroplast thylakoid membrane" evidence=ISS

TAIR|locus:2132006 AT4G22240 [Arabidopsis thaliana (taxid:3702)]

 Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
 Identities = 199/324 (61%), Positives = 240/324 (74%)

Query:     1 MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPL 59
             MA++  + QF C+T     P+++  SKP  L P+ S+ I R +     +++      R +
Sbjct:     1 MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRV 55

Query:    60 VLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSE 119
                RA                          ++V E + LK++LVDS YGTDRGL+A+SE
Sbjct:    56 FKVRATDTGEIGSALLAAEEAI---------EDVEETERLKRSLVDSLYGTDRGLSASSE 106

Query:   120 TRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEIS 179
             TRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF  LFPLLSRG +PL +V+EIS
Sbjct:   107 TRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEIS 166

Query:   180 QTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIP 239
             QTIDS+NFTVQNS+RFAGPL T SISTNAKFE+RSPKRVQIKFE+G+IGTPQ+TDS+ IP
Sbjct:   167 QTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIP 226

Query:   240 ENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDED 299
             E VE LGQKIDL+P +G+L+SVQDTASSVA+TISSQPPLKFS+   NAQSWLLTTYLD+D
Sbjct:   227 EYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKD 286

Query:   300 LRISRADAGSVFVFIKEGSPLLMP 323
             +RISR D GSVFV IKEGSPLL P
Sbjct:   287 IRISRGDGGSVFVLIKEGSPLLNP 310

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

TAIR|locus:2136627 FIB "fibrillin" [Arabidopsis thaliana (taxid:3702)]

 Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
 Identities = 197/327 (60%), Positives = 239/327 (73%)

Query:     1 MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPL 59
             MA++    QFPCKTL+ +  + +  SK P +LP+NS+       ++S +   G +  RP 
Sbjct:     1 MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSIN------RRSEI---GVSVHRPD 51

Query:    60 VLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPK---EVTEIDNLKKALVDSFYGTDRGLNA 116
                RA                        + K    V E + LK++L DS YGTDRGL+ 
Sbjct:    52 FKIRATDIDDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSV 111

Query:   117 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE 176
             +S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF GLFPLLSR   PL +V+
Sbjct:   112 SSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVD 171

Query:   177 EISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSL 236
             EISQTIDS++FTVQNS+RFAGP +TTS STNAKFE+RSPKRVQIKFE+G+IGTPQ+TDS+
Sbjct:   172 EISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSI 231

Query:   237 VIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYL 296
              IPE+VE LGQKIDL+P KG+L+SVQDTASSVA+TIS+QPPLKFS+ + N QSWLLTTYL
Sbjct:   232 EIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYL 291

Query:   297 DEDLRISRADAGSVFVFIKEGSPLLMP 323
             D+DLRISR D GSV+V IKEGS LL P
Sbjct:   292 DKDLRISRGDGGSVYVLIKEGSSLLNP 318

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010205 "photoinhibition" evidence=IMP

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

TAIR|locus:2062497 AT2G35490 [Arabidopsis thaliana (taxid:3702)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 112/223 (50%), Positives = 151/223 (67%)

Query:    99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 158
             LK+ L DS YGT+ G  A SE RAE++EL+ QLEA NPTPAP E   LL+  W+L+YT+F
Sbjct:   153 LKRCLADSVYGTELGFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAF 212

Query:   159 SGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRV 218
             S L PLL+ G+ PL +V+ ISQ+ID+ N  + NS   + P A  S S  A FEVRSP R+
Sbjct:   213 SELIPLLAAGSTPLLKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRI 272

Query:   219 QIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPL 278
             ++ F+EG +  P +  S+ +PE+V   GQ+I LS  K  L+ +QD A+++++ +S QPPL
Sbjct:   273 EVSFKEGTLKPPVIKSSVDLPESVGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPL 332

Query:   279 KFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 321
             K     +   SWLLTTYLD+DLRISR D G +FV  +EGS LL
Sbjct:   333 KLPFPGNRGSSWLLTTYLDKDLRISRGDGG-LFVLAREGSSLL 374

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2178133 AT5G09820 [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
 Identities = 41/160 (25%), Positives = 78/160 (48%)

Query:    91 KEVTEIDNLKKALVDSFYGTDRGL-NATSETRAEIVELITQLEAKNPTPAPTEALTLLNA 149
             +E+T + ++K+ L ++  G +RG+    S+ + EI  L+  LE +NPTP PT  L  +  
Sbjct:    79 EEIT-VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGG 137

Query:   150 KWILVYTSFSGLFPLLSR-GTLPLARVEEISQTIDSENFTVQNSIRF--AG-PLATTSIS 205
              W L+Y++ + L    ++ G      + ++ Q ID       + ++F   G  L      
Sbjct:   138 CWKLIYSTITVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFR 197

Query:   206 TNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFL 245
               A F++ S   V+I +E   I   Q+ +  +  +N++ L
Sbjct:   198 IVASFKISSKSSVEITYESSTIKPDQLMN--IFRKNMDLL 235

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

TAIR|locus:2092150 AT3G26070 [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
 Identities = 28/93 (30%), Positives = 52/93 (55%)

Query:    99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 158
             LK+ L+++    +RG  A+ + +  I +L  ++EA NPT  P ++  L+N KW L+YT+ 
Sbjct:    74 LKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKEPLKS-DLVNGKWELIYTTS 132

Query:   159 SGLFPLLSRGTLPLARVEEISQTIDSENFTVQN 191
             + +  L ++    L  +    Q+I+ +   VQN
Sbjct:   133 ASI--LQAKKPRFLRSITNY-QSINVDTLKVQN 162

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

TAIR|locus:2060020 AT2G42130 [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 59/231 (25%), Positives = 104/231 (45%)

Query:    97 DNLKKALVDS--FYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 154
             ++L  AL D+  F     G   T+  R ++ E IT LE  NPTP PT +      +W   
Sbjct:    73 ESLLLALKDAGGFEALVTG-KTTNMQRIDVNERITSLERLNPTPRPTTS-PCFEGRWNFE 130

Query:   155 Y--TSFSGLFP---LLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAK 209
             +  +   GL     +  R    LA +  +   I   N     +I+    + +  I  ++K
Sbjct:   131 WFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNSIES-KIILSSK 189

Query:   210 FEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEF-LGQKIDLSPFKGILSSVQDTASSV 268
               V  P R++ ++ EG++ TP V +  V PE ++  LGQ           +++Q   + +
Sbjct:   190 LTVEGPLRLKEEYVEGMLETPTVIEEAV-PEQLKSALGQAA---------TTLQQLPALI 239

Query:   269 AKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSP 319
               T++S   L+  +S S  + + + +YLDE++ I R   G   V  +  +P
Sbjct:   240 KDTLASG--LRIPLSGS-FERFFMISYLDEEILIVRDTEGVPEVLTRIETP 287

GO:0005198 "structural molecule activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

TAIR|locus:2092165 AT3G26080 [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
 Identities = 22/63 (34%), Positives = 38/63 (60%)

Query:    99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 158
             LK  LV++    +RG  A+ + +  I +L  ++EA NPT  P ++  L+N KW L+YT+ 
Sbjct:    65 LKHELVEAIEPLERGATASPDDQLLIDQLARKVEAVNPTKEPLKS-DLINGKWELIYTTS 123

Query:   159 SGL 161
             + +
Sbjct:   124 AAI 126

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2095803 PGL34 "plastoglobulin 34kD" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 49/211 (23%), Positives = 95/211 (45%)

Query:   117 TSETRAEIVELITQLEAKNPTPAPTEALTL---LNAKWILVYTSFS-GLFPLLSRGTLPL 172
             T   + ++ E IT LE  NPTP PT +  L    + +W  V T  S  +  +  R    L
Sbjct:    99 TDMQKIDVNERITNLERLNPTPRPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTL 158

Query:   173 ARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQV 232
               +  +   I   N     +I+    +    I+ ++K  +  P R++ ++ EG++ +P V
Sbjct:   159 VSLSNMEIFIKDNNTKATANIKLLNSIEN-KITLSSKLTIEGPLRMKEEYLEGLLESPTV 217

Query:   233 TDSLVIPENVE-FLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWL 291
              +  V P+ +   LGQ           +++Q     +  T+++   L+  +  +  Q + 
Sbjct:   218 IEEAV-PDQLRGLLGQAT---------TTLQQLPEPIKDTLANG--LRIPLGGTY-QRFF 264

Query:   292 LTTYLDEDLRISRADAG--SVFVFIKEGSPL 320
             + +YLD+++ I R  AG   V   ++  SP+
Sbjct:   265 MISYLDDEILIVRDTAGVPEVLTRVETSSPM 295

GO:0005198 "structural molecule activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49629	PAP2_ARATH	No assigned EC number	0.6327	0.9566	0.9967	yes	no
P80471	LIPC_SOLTU	No assigned EC number	0.7239	1.0	0.9907	N/A	no
Q94KU6	PAP2_BRACM	No assigned EC number	0.6472	0.9783	0.9905	N/A	no
Q96398	CHRC_CUCSA	No assigned EC number	0.6941	0.9721	0.9751	N/A	no
Q94FZ9	PAP1_BRACM	No assigned EC number	0.6158	0.9504	0.9388	N/A	no
Q6K439	PAP2_ORYSJ	No assigned EC number	0.6715	0.8266	0.8369	yes	no
O99019	LIPC_SOLDE	No assigned EC number	0.7147	1.0	0.9907	N/A	no
Q9ZWQ8	PAP_CITUN	No assigned EC number	0.9876	1.0	1.0	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	323
pfam04755	196	pfam04755, PAP_fibrillin, PAP_fibrillin	6e-84

>gnl|CDD|218245 pfam04755, PAP_fibrillin, PAP_fibrillin

 Score =  251 bits (642), Expect = 6e-84
 Identities = 118/216 (54%), Positives = 145/216 (67%), Gaps = 22/216 (10%)

Query: 99  LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 158
           LK+ L+D+ YGT+RGL A+S+ RAEI   +TQLEA NPTPAPTE+L LLN KW L+YT+ 
Sbjct: 3   LKRKLLDAIYGTNRGLRASSDDRAEIESAVTQLEALNPTPAPTESLDLLNGKWRLLYTTS 62

Query: 159 SGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRV 218
             L PLL+RG LPL +V +I QTID  N TV NS+ F+GPLA  S S  AKFE+RSPKRV
Sbjct: 63  KELLPLLARGRLPLLKVGQIYQTIDVNNLTVYNSVTFSGPLAEGSFSVRAKFEIRSPKRV 122

Query: 219 QIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPL 278
           QI+FE G++GT                         KG L+ +QDTAS++ + ISSQ PL
Sbjct: 123 QIRFERGVLGT---------------------PQLLKGSLTPLQDTASNI-RGISSQLPL 160

Query: 279 KFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFI 314
            F +S   A+ WL TTYLDEDLRISR D GS+FV  
Sbjct: 161 PFPLSGDRAKGWLETTYLDEDLRISRGDGGSLFVLA 196

This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins. Length = 196

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	323
PF04755	198	PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843	100.0

>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle

Probab=100.00  E-value=6.5e-45  Score=325.91  Aligned_cols=197  Identities=45%  Similarity=0.775  Sum_probs=171.8

Q ss_pred             HHHHHHHHHHhhcCCCCCcCCHhhHHHHHHHHHHHHHhCCCCCCCccccccCcEEEEEEeccCCcccccccCCCCceeec
Q 020639           97 DNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE  176 (323)
Q Consensus        97 ~~lK~~LL~aia~t~RG~~as~~~r~~I~elI~qLEalNPtp~P~~s~~lL~G~W~LvYTS~~~~~pll~~g~lP~~~vG  176 (323)
                      +++|++||+++++++||+.+++++|++|+++|++||++||++.|+++.++|+|+|+|+|||+....+.++.+..+++.++
T Consensus         1 ~~~K~~Ll~~~~~~~rG~~~~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~~~~~~l~~~~~~~~~~~   80 (198)
T PF04755_consen    1 QDLKQELLQAVAGTNRGLRASPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSPEIRSLLQRGRLPGVRVG   80 (198)
T ss_pred             ChHHHHHHHHHhccCCCccCCHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCCCcccccccccccccccc
Confidence            36999999999999999999999999999999999999999999987789999999999999998877777777888999


Q ss_pred             ceeEEEecCCceEEEEEEecC-CccceEEEEEEEEEEeCCCeEEEEEEeeeecCccccccccccchhhhccccccCCccc
Q 020639          177 EISQTIDSENFTVQNSIRFAG-PLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFK  255 (323)
Q Consensus       177 ~v~Q~ID~~~~~v~N~V~f~~-Pl~~gsv~v~As~ev~s~~Rv~V~Fe~~~l~~~~~~~~~~~p~~v~~~G~~idl~p~~  255 (323)
                      ++||+||.+++++.|+|+|.. |+..+.+.+.+++++.+++|+.++|+++.+.++.+                     ++
T Consensus        81 ~v~Q~id~~~~~~~N~v~~~~~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~---------------------l~  139 (198)
T PF04755_consen   81 RVFQTIDADNGRVENVVELSGFPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSL---------------------LK  139 (198)
T ss_pred             ceEEEEECCCceEEEEEEEeccCceEEEEEEEEEEEEccccEEEEEEEeeEEcccce---------------------ee
Confidence            999999999999999999876 76778999999999999999999999999987653                     22


Q ss_pred             ccccchhhhhhhhhhhccCCCCcccccCCCCCceEEEEEEecCCeEEEecCCCcEEEEE
Q 020639          256 GILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFI  314 (323)
Q Consensus       256 ~~l~~~~~~~~~i~~~~s~~pPlk~Pl~~~~~~gwldtTYLDedLRIsRG~~G~vFVl~  314 (323)
                      +++.++......+.+.+....|+++++++..++|||+||||||||||+||++|++|||.
T Consensus       140 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~l~~tYLDedlRI~Rg~~G~~fVl~  198 (198)
T PF04755_consen  140 GVLGPLKDALNNVPRGISDELPVPLPLPGGSPKGWLDTTYLDEDLRISRGNKGSLFVLK  198 (198)
T ss_pred             ccchhhhhhhhhcccccccccccccccCCCCCceEEEEEEECCCeEEEEcCCCCEEEeC
Confidence            22333444444455555566788888887789999999999999999999999999984

The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	323
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 30/221 (13%), Positives = 62/221 (28%), Gaps = 63/221 (28%)

Query: 12  CKTLSQNPPHNQFTSKPSILPLNSV--RISRSLAKKSF------LS-------IQGFT-R 55
              +  N       S    L ++S+   + R L  K +      L           F   
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265

Query: 56  ARPLVLTRAA----------------DDDEWGPEKEKEEG---GALAVAEEESPKEVTEI 96
            + L+ TR                  D        ++ +      L    ++ P+EV   
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

Query: 97  DNLKKALV-----DSFYGTDRGLNATSETRAEIVEL-ITQLEAKNPTPAPTEALTLLNAK 150
           +  + +++     D     D   +   +    I+E  +  LE       P E   +    
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE-------PAEYRKM---- 374

Query: 151 WILVYTSFSGLFP---LLSRGTLPL---ARVEEISQTIDSE 185
               +   S +FP    +    L L     ++     + ++
Sbjct: 375 ----FDRLS-VFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 8e-05
 Identities = 57/378 (15%), Positives = 100/378 (26%), Gaps = 103/378 (27%)

Query: 1   MASIS-QTNQFPCKTLSQNPPHNQ-FTSKPSILPLNSVRIS---------RSLAKKSFLS 49
           M+ I  +  Q    T       ++ +         N  R+            L     + 
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154

Query: 50  IQGFTRARPLVLTRAADDDEWGPEKEKEEGGA--LAVAEEESPKEVTE--------IDNL 99
           I G   +    +            + K +     L +    SP+ V E        ID  
Sbjct: 155 IDGVLGSGKTWVALDVCLSY--KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 100 KKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLL----NAK-W--- 151
             +  D        ++     +AE+  L+     +N        L +L    NAK W   
Sbjct: 213 WTSRSDHSSNIKLRIH---SIQAELRRLLKSKPYEN-------CLLVLLNVQNAKAWNAF 262

Query: 152 -----ILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIR-FA--------- 196
                IL+ T F  +   LS      A    IS    S   T                  
Sbjct: 263 NLSCKILLTTRFKQVTDFLS-----AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317

Query: 197 --------GPLATTSISTNAK-FEVRSP--KRVQIKFEEGIIG------TP----QVTDS 235
                    P   + I+ + +         K V       II        P    ++ D 
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Query: 236 LVI-PENVEFLGQKIDLSPFK--GIL---SSVQDTASSVAKTISSQPPLKFSISNSNAQS 289
           L + P +       I   P     ++       D    V K        K+S+     + 
Sbjct: 378 LSVFPPSA-----HI---PTILLSLIWFDVIKSDVMVVVNKLH------KYSLVEKQPKE 423

Query: 290 WLLTTY-LDEDLRISRAD 306
             ++   +  +L++   +
Sbjct: 424 STISIPSIYLELKVKLEN 441

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00