Citrus Sinensis ID: 020708

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
Protein Sequence
MAASVSSLTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGPLVSSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRSIRKSLGSSS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccEHcccccccccccccccccccccccHHHHcccccEEEEEEcccccccccccccccccccccccccccccccccHHcccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHEEEEEEEEEccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
maasvssltfpffnskphfkisqnnvdnpliatnnQIQSLFVfskskpfstfqsrrhlgplvsscfptrasfssdmfpdniteeerilpvteetpLKFLLWVVFWASLSLVWFStsgdanaaVDSIRASAIGLKIATAlrrsswpdEAVVFALATLPvlelrgaipvgywmQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFlagknrsaSQFLDMLFQKAKekagpveefQWLGLMLFVavpfpgtgawTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRSIRKSLGSSS
Flexible Loop (DISEMBL)
MAASVSSLTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGPLVSSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRSIRKSLGSSS
Low Complexity Region (SEG)
MAASVSSLTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGPLVSSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAgllvnllvnlglKYAIVTGAILFIISTFMWSTLRSIRKSLGSSS
Disordered region (IsUnstruct)
*********FPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGPLVSSCFPTRASF***MFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRS*********
Disordered Region (DISOPRED)
******S**FPFFNSKPHFKISQNNVDNPLIA*****************************************************RILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQK******PVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRS**K******
Disordered Region (DISEMBL)
MAASVSSLTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGPLVSSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRS*********
Disordered Region (DISPRO)
*****SSLTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGPLVSSC***RASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRSIRKS*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAASVSSLTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGPLVSSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRSIRKSLGSSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
359473285	311	PREDICTED: uncharacterized protein LOC10	0.953	0.987	0.662	1e-100
358248114	321	uncharacterized protein LOC100813905 [Gl	0.981	0.984	0.657	1e-100
449434831	315	PREDICTED: uncharacterized protein LOC10	0.906	0.926	0.690	8e-98
224100443	310	predicted protein [Populus trichocarpa]	0.903	0.938	0.700	5e-97
255558242	401	conserved hypothetical protein [Ricinus	0.854	0.685	0.665	1e-94
297814508	324	hypothetical protein ARALYDRAFT_904489 [	0.832	0.827	0.667	1e-89
49660103	324	hypothetical protein At2g02590 [Arabidop	0.788	0.783	0.706	2e-89
15227004	324	uncharacterized protein [Arabidopsis tha	0.788	0.783	0.706	2e-89
357486465	371	Small multi-drug export protein [Medicag	0.928	0.805	0.522	1e-82
218193921	322	hypothetical protein OsI_13928 [Oryza sa	0.661	0.661	0.690	1e-80

>gi|359473285|ref|XP_003631283.1| PREDICTED: uncharacterized protein LOC100853229 [Vitis vinifera] gi|296086436|emb|CBI32025.3| unnamed protein product [Vitis vinifera]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 216/326 (66%), Positives = 250/326 (76%), Gaps = 19/326 (5%)

Query: 1   MAASVSS---LTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRH 57
           MAASVSS   L     + + H  I  ++      + +NQ +   +F  +   +   SR  
Sbjct: 1   MAASVSSPPPLPLTVSSRRTHLAIWLHSR-----SADNQHR---LFKPNPSLALRNSRHS 52

Query: 58  LGPL-VSSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTS 116
             PL +S    T A  S D F D + +        E  P+KFL WV+FWASLS+ WF+ S
Sbjct: 53  RHPLTISPPHSTPAQASPDEFLDKVGD-------FEGPPVKFLFWVLFWASLSVAWFAAS 105

Query: 117 GDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPV 176
           GDANAA DSIRAS+ GLK+A+ALR S WPDEAVV ALATLPV+ELRGAIPVGYWMQLKP 
Sbjct: 106 GDANAATDSIRASSFGLKVASALRSSGWPDEAVVVALATLPVIELRGAIPVGYWMQLKPA 165

Query: 177 LLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLG 236
            LT+LSVLGNM+PVPFIILYLK+FA+FLAGKN+SAS+FLDMLF+KAKEKAGPVEEFQWLG
Sbjct: 166 TLTILSVLGNMIPVPFIILYLKRFATFLAGKNKSASRFLDMLFEKAKEKAGPVEEFQWLG 225

Query: 237 LMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVT 296
           LMLFVAVPFPGTGAWTGA IA+ILDMPFW A+SANFFGVV+AGLLVNLLVNLGLKYAIVT
Sbjct: 226 LMLFVAVPFPGTGAWTGAIIASILDMPFWPAVSANFFGVVLAGLLVNLLVNLGLKYAIVT 285

Query: 297 GAILFIISTFMWSTLRSIRKSLGSSS 322
           G ILF ISTFMWS LRS+ K+LGSS+
Sbjct: 286 GVILFFISTFMWSVLRSLMKALGSSN 311

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248114|ref|NP_001240072.1| uncharacterized protein LOC100813905 [Glycine max] gi|255635459|gb|ACU18082.1| unknown [Glycine max]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 215/327 (65%), Positives = 250/327 (76%), Gaps = 11/327 (3%)

Query: 1   MAASVSSLTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGP 60
           MAAS  SLT PF   KPH ++S  N  +PLI      QSL     +  FST  +  H  P
Sbjct: 1   MAASALSLTSPFHFRKPHNRVSPLNA-HPLILIQKGKQSL---KSNFSFSTLNASPHFRP 56

Query: 61  LV----SSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTS 116
            +    S+   TRAS S + F D   E +R+L ++EE P+ F  WV+FWASLSL WF+ S
Sbjct: 57  PIAIAPSTLTLTRASSSDECF-DPAGEAQRLL-LSEEKPVNFAFWVIFWASLSLAWFAVS 114

Query: 117 GDANAAVDS-IRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKP 175
            DANAAV+S I+AS  G  IA +LR+  WPD  VVF LATLPVLELRGAIPVGYWMQL P
Sbjct: 115 RDANAAVESSIKASGFGFNIANSLRKLGWPDWVVVFTLATLPVLELRGAIPVGYWMQLNP 174

Query: 176 VLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWL 235
           V LTVLS+LGNMVPVPFI+LYLKK ASF+A ++ SAS+FLDMLF+ AKEKAGPVEEFQWL
Sbjct: 175 VTLTVLSILGNMVPVPFIVLYLKKIASFVAARSPSASRFLDMLFENAKEKAGPVEEFQWL 234

Query: 236 GLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIV 295
           GLMLFVAVPFPGTGAWTGAFIA+ILDMPFW+A+SANFFGVV AGLLVNLLVNLGLKYAI+
Sbjct: 235 GLMLFVAVPFPGTGAWTGAFIASILDMPFWAAVSANFFGVVFAGLLVNLLVNLGLKYAII 294

Query: 296 TGAILFIISTFMWSTLRSIRKSLGSSS 322
           TG ILF +STFMWS LR+++K L SS+
Sbjct: 295 TGVILFFVSTFMWSVLRNLKKGLSSSN 321

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434831|ref|XP_004135199.1| PREDICTED: uncharacterized protein LOC101204187 [Cucumis sativus] gi|449478468|ref|XP_004155326.1| PREDICTED: uncharacterized LOC101204187 [Cucumis sativus]

 Score =  363 bits (931), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 210/304 (69%), Positives = 239/304 (78%), Gaps = 12/304 (3%)

Query: 26  VDNPLIATNNQIQSLFVFSKSKPFST--FQSRRHLGPLVS----SCFP--TRASFSSDMF 77
           + +PL +  +  ++LF    ++P  T   QS     P V+    +CF   +R S      
Sbjct: 7   LTSPLFSAFSPRKTLFSLKLNRPSITRSTQSLHFSSPFVNVPHFNCFDPVSRTSRIIRTV 66

Query: 78  P----DNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGL 133
           P    +   E++ I+P  EE P+K LL V+FWASLSL WF+ SGDA AAVDSIRAS  GL
Sbjct: 67  PRSSSNGFLEDDEIIPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVDSIRASNFGL 126

Query: 134 KIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFI 193
           KIA+AL+ S WP EAVVFALATLPV+ELRGAIPVGYWMQLKPV LTVLSVLGNMVPVPFI
Sbjct: 127 KIASALQNSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVLGNMVPVPFI 186

Query: 194 ILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTG 253
           ILYLKKFA+FLAG+N SASQFLDMLF++AKEKA PVEEFQWLGLMLFVAVPFPGTGAWTG
Sbjct: 187 ILYLKKFATFLAGRNASASQFLDMLFKRAKEKAAPVEEFQWLGLMLFVAVPFPGTGAWTG 246

Query: 254 AFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRS 313
           A IA+ILDMPFWS +SANFFGVV+AGLLVNLLVNLGLK AIVTG ILFIISTFMWS LR 
Sbjct: 247 AIIASILDMPFWSGVSANFFGVVVAGLLVNLLVNLGLKEAIVTGVILFIISTFMWSILRM 306

Query: 314 IRKS 317
           I+KS
Sbjct: 307 IKKS 310

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100443|ref|XP_002311878.1| predicted protein [Populus trichocarpa] gi|222851698|gb|EEE89245.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (924), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 208/297 (70%), Positives = 233/297 (78%), Gaps = 6/297 (2%)

Query: 18  HFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGPLVSSCFPTRASFSSDMF 77
            FKI    V   L    ++ Q +    KSKP  +F +   L  L      T    SS+ F
Sbjct: 19  RFKIISGQVTTKLSIVAHKKQPVL---KSKP--SFLAFHRLDGLRFLSSSTSTRASSNGF 73

Query: 78  PDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIAT 137
            D  T+++ ILP  E  P KFL WV FWASLSLVWF+ SGDANAAVDSI+AS  GLKIAT
Sbjct: 74  FDT-TQDKEILPSFEPKPAKFLFWVAFWASLSLVWFAASGDANAAVDSIKASGFGLKIAT 132

Query: 138 ALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYL 197
           A RR  WPDEAVVFALATLPVLELRGAIPVGYWMQLKP++LT+LSV+GNMVPVPFIILYL
Sbjct: 133 AFRRLGWPDEAVVFALATLPVLELRGAIPVGYWMQLKPIMLTILSVVGNMVPVPFIILYL 192

Query: 198 KKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIA 257
           K FASFLAG+N+ AS+FLDMLF+ AKEK+GPV+EFQWLGLMLFVAVPFPGTGAWTGA IA
Sbjct: 193 KPFASFLAGRNQPASRFLDMLFENAKEKSGPVKEFQWLGLMLFVAVPFPGTGAWTGAIIA 252

Query: 258 AILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRSI 314
           +ILDMPFWSA+SANF GVV+AGLLVNLLVNLGLKYA +TG ILF ISTFMWS LR I
Sbjct: 253 SILDMPFWSAVSANFCGVVLAGLLVNLLVNLGLKYATITGIILFFISTFMWSILRHI 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558242|ref|XP_002520148.1| conserved hypothetical protein [Ricinus communis] gi|223540640|gb|EEF42203.1| conserved hypothetical protein [Ricinus communis]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 191/287 (66%), Positives = 218/287 (75%), Gaps = 12/287 (4%)

Query: 1   MAASVSSLTFPFFNSKPHFKISQNNVDN----PLIATNNQIQSLFVFSKSKPFSTFQSRR 56
           MAA VS L       K + +   N+V N    P IA   Q      F KSKPF +FQ+  
Sbjct: 1   MAAIVSPLLLSASFRKTYLRFLPNHVKNLNLYPSIAQKKQ-----SFVKSKPFLSFQTVN 55

Query: 57  --HLGPLVSSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFS 114
                PL ++ F T  + SS  F  N  E+E ILP  EE P+KFL WVVFWAS+SL WF+
Sbjct: 56  FPSCNPLSAAPFTTTRASSSHGF-LNSAEDEEILPSFEEKPVKFLFWVVFWASVSLAWFA 114

Query: 115 TSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLK 174
            S DANAAVDSI+AS+ GLKIA +LR   WPDEAVVFALATLPV+ELRGAIPVGYWMQLK
Sbjct: 115 VSRDANAAVDSIKASSFGLKIANSLRGLGWPDEAVVFALATLPVIELRGAIPVGYWMQLK 174

Query: 175 PVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQW 234
           P++LTVLSV GNMVPVPFIILYLK+FASFLAG+N+SAS+FLDMLF+ AK+KA PVEEFQW
Sbjct: 175 PLILTVLSVAGNMVPVPFIILYLKRFASFLAGRNQSASRFLDMLFENAKQKADPVEEFQW 234

Query: 235 LGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLL 281
           LGLMLFVAVPFPGTGAWTGA IA+ILDMPFW A+SANF GVV+AGLL
Sbjct: 235 LGLMLFVAVPFPGTGAWTGAIIASILDMPFWPAVSANFLGVVLAGLL 281

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814508|ref|XP_002875137.1| hypothetical protein ARALYDRAFT_904489 [Arabidopsis lyrata subsp. lyrata] gi|297320975|gb|EFH51396.1| hypothetical protein ARALYDRAFT_904489 [Arabidopsis lyrata subsp. lyrata]

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/283 (66%), Positives = 220/283 (77%), Gaps = 15/283 (5%)

Query: 45  KSKPFSTFQS-RRHLGPLVSSCFPTRASFSSDMFPDNITEEER-----ILPVTEETPLKF 98
           +S+ FS F   RR+          TR   S D F     E+E       LP     P+KF
Sbjct: 49  QSQSFSLFHPLRRNF---------TRFCSSPDGFLRKTKEDEEGNEIIQLPSIGVNPVKF 99

Query: 99  LLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPV 158
            + VV WAS SL+WF+ SGDA AA DSI++S+ GLKIA+ LRR  WPDEAVVFALATLPV
Sbjct: 100 AICVVLWASFSLLWFARSGDAKAATDSIKSSSFGLKIASTLRRFGWPDEAVVFALATLPV 159

Query: 159 LELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDML 218
           +ELRGAIP GYWMQLKP++LT  SVLGNMVPVPFI+LYLKKFASF+AGK+++AS+ LD+L
Sbjct: 160 IELRGAIPAGYWMQLKPIVLTFFSVLGNMVPVPFIVLYLKKFASFVAGKSQTASKLLDIL 219

Query: 219 FQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIA 278
           F++AKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGA IA+ILDMPFW A+S+NF GVV+A
Sbjct: 220 FKRAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAIIASILDMPFWPAVSSNFCGVVLA 279

Query: 279 GLLVNLLVNLGLKYAIVTGAILFIISTFMWSTLRSIRKSLGSS 321
           GLLVNLLVNLGLK AIV G  LF +STFMWS LR+IRKS+  S
Sbjct: 280 GLLVNLLVNLGLKQAIVAGIALFFVSTFMWSVLRNIRKSIKPS 322

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49660103|gb|AAT68342.1| hypothetical protein At2g02590 [Arabidopsis thaliana]

 Score =  335 bits (859), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 183/259 (70%), Positives = 213/259 (82%), Gaps = 5/259 (1%)

Query: 68  TRASFSSDMFPDNITEEER-----ILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAA 122
           TR   S D F  N  ++E       LP     P+KF + VV WAS SL+WF+ SGDA AA
Sbjct: 64  TRFCSSPDGFLRNTKDDEEGNEIIQLPSIGVNPVKFAICVVLWASFSLLWFARSGDAKAA 123

Query: 123 VDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLS 182
            DSI++S+ GL+IA+ LRR  WPDEAVVFALATLPV+ELRGAIPVGYWMQLKPV+LT  S
Sbjct: 124 TDSIKSSSFGLRIASTLRRFGWPDEAVVFALATLPVIELRGAIPVGYWMQLKPVVLTSFS 183

Query: 183 VLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVA 242
           VLGNMVPVPFI+LYLK FASF+AGK+++AS+ LD+LF++AKEKAGPVEEF+WLGLMLFVA
Sbjct: 184 VLGNMVPVPFIVLYLKTFASFVAGKSQTASKLLDILFKRAKEKAGPVEEFKWLGLMLFVA 243

Query: 243 VPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFI 302
           VPFPGTGAWTGA IA+ILDMPFWSA+S+NF GVV+AGLLVNLLVNLGLK AIV G  LF 
Sbjct: 244 VPFPGTGAWTGAIIASILDMPFWSAVSSNFCGVVLAGLLVNLLVNLGLKQAIVAGIALFF 303

Query: 303 ISTFMWSTLRSIRKSLGSS 321
           +STFMWS LR+IRKS+  S
Sbjct: 304 VSTFMWSVLRNIRKSIKPS 322

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227004|ref|NP_178363.1| uncharacterized protein [Arabidopsis thaliana] gi|3184280|gb|AAC18927.1| putative transport protein [Arabidopsis thaliana] gi|21554968|gb|AAM63742.1| putative transport protein [Arabidopsis thaliana] gi|61742564|gb|AAX55103.1| hypothetical protein At2g02590 [Arabidopsis thaliana] gi|110741534|dbj|BAE98716.1| putative transport protein [Arabidopsis thaliana] gi|330250508|gb|AEC05602.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 183/259 (70%), Positives = 213/259 (82%), Gaps = 5/259 (1%)

Query: 68  TRASFSSDMFPDNITEEER-----ILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAA 122
           TR   S D F  N  ++E       LP     P+KF + VV WAS SL+WF+ SGDA AA
Sbjct: 64  TRFCSSPDGFLRNTKDDEEGNEIIQLPSIGVNPVKFAICVVLWASFSLLWFARSGDAKAA 123

Query: 123 VDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLS 182
            DSI++S+ GL+IA+ LRR  WPDEAVVFALATLPV+ELRGAIPVGYWMQLKPV+LT  S
Sbjct: 124 TDSIKSSSFGLRIASTLRRFGWPDEAVVFALATLPVIELRGAIPVGYWMQLKPVVLTSFS 183

Query: 183 VLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVA 242
           VLGNMVPVPFI+LYLK FASF+AGK+++AS+ LD+LF++AKEKAGPVEEF+WLGLMLFVA
Sbjct: 184 VLGNMVPVPFIVLYLKTFASFVAGKSQTASKLLDILFKRAKEKAGPVEEFKWLGLMLFVA 243

Query: 243 VPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFI 302
           VPFPGTGAWTGA IA+ILDMPFWSA+S+NF GVV+AGLLVNLLVNLGLK AIV G  LF 
Sbjct: 244 VPFPGTGAWTGAIIASILDMPFWSAVSSNFCGVVLAGLLVNLLVNLGLKQAIVAGIALFF 303

Query: 303 ISTFMWSTLRSIRKSLGSS 321
           +STFMWS LR+IRKS+  S
Sbjct: 304 VSTFMWSVLRNIRKSIKPS 322

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486465|ref|XP_003613520.1| Small multi-drug export protein [Medicago truncatula] gi|355514855|gb|AES96478.1| Small multi-drug export protein [Medicago truncatula]

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 198/379 (52%), Positives = 235/379 (62%), Gaps = 80/379 (21%)

Query: 8   LTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHL-GPLVSSCF 66
           LT PF  +KPH KI       PL   ++         K KP  T      L    ++   
Sbjct: 9   LTPPFHFTKPHKKI-------PLFKHHSL--------KPKPSLTLHHGSSLLTHSLTKIA 53

Query: 67  PTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDANAA---- 122
           PT+   SS  + D I E ER++   EE P+KF LWV+FWAS+SL WF+ S DANAA    
Sbjct: 54  PTQFKASSTEYLDAIDEPERLI-FYEEKPVKFALWVIFWASMSLAWFAYSKDANAAAGTG 112

Query: 123 -VDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVL 181
            VDSI+AS  GLKIA +LR+  WPD  VVF LATLPVLELRGAIPVGYW+QL P  LTVL
Sbjct: 113 AVDSIKASGFGLKIANSLRKLGWPDWVVVFTLATLPVLELRGAIPVGYWLQLDPASLTVL 172

Query: 182 SVLG-----------------------------------------------NMVPVP--- 191
           S+LG                                               +++P P   
Sbjct: 173 SILGKVSVAEMRMMHWMFGKTRHDRIEMRIIERGVGVAPIKKDVDINELDWDVIPTPLSG 232

Query: 192 --------FIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAV 243
                   FIILYLK+FASFLA K+ SAS+FLD+LF+ AK KAGPVEEFQWLGLMLFVAV
Sbjct: 233 LRNMVPVPFIILYLKRFASFLASKSPSASRFLDILFKNAKAKAGPVEEFQWLGLMLFVAV 292

Query: 244 PFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAILFII 303
           PFPGTGAW+GA IA+ILDMPFW A+SANFFGVV AG+LVNLLVNLGLKYAI+TG ILF +
Sbjct: 293 PFPGTGAWSGAIIASILDMPFWPAVSANFFGVVFAGMLVNLLVNLGLKYAIITGIILFFV 352

Query: 304 STFMWSTLRSIRKSLGSSS 322
           STFMW+ LR+++K   SS+
Sbjct: 353 STFMWTILRNLKKGFSSSN 371

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218193921|gb|EEC76348.1| hypothetical protein OsI_13928 [Oryza sativa Indica Group]

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 147/213 (69%), Positives = 177/213 (83%)

Query: 106 ASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAI 165
            +L        G A AA DSI+AS  GL++A +LRR  W DEAVVF LATLPV+ELRGAI
Sbjct: 107 GALGCAVLCCGGAAVAAEDSIKASGFGLRVAASLRRLGWADEAVVFTLATLPVIELRGAI 166

Query: 166 PVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEK 225
           PVGYWM+L P+ LTVLSVLGNMVPVPFIILYLKK A+FL+ ++ SA++ +D+LF++A++K
Sbjct: 167 PVGYWMRLDPIRLTVLSVLGNMVPVPFIILYLKKLAAFLSQRSASATRIMDLLFERARQK 226

Query: 226 AGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLL 285
           A PVEEFQWLGLMLFVAVPFPGTGAWTGA I+++L MPFWS  SANF GVV+AGLLVNLL
Sbjct: 227 AAPVEEFQWLGLMLFVAVPFPGTGAWTGAIISSVLGMPFWSGFSANFVGVVLAGLLVNLL 286

Query: 286 VNLGLKYAIVTGAILFIISTFMWSTLRSIRKSL 318
           +NLGLKYAI+TG +LF +ST MW  LRS++KSL
Sbjct: 287 MNLGLKYAIITGLVLFFLSTVMWGVLRSLKKSL 319

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
TAIR|locus:2065248	324	AT2G02590 "AT2G02590" [Arabido	0.857	0.851	0.628	4.3e-86
UNIPROTKB|Q3Z8G8	177	DET0746 "Putative uncharacteri	0.5	0.909	0.355	2.1e-20
TIGR_CMR|DET_0746	177	DET_0746 "conserved hypothetic	0.5	0.909	0.355	2.1e-20

TAIR|locus:2065248 AT2G02590 "AT2G02590" [Arabidopsis thaliana (taxid:3702)]

 Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
 Identities = 181/288 (62%), Positives = 214/288 (74%)

Query:    46 SKPFST-FQSRRHLGPLVSSCF-PTRASF-----SSDMFPDNITEEER---I--LPVTEE 93
             S P S  ++  R L    SS F P R +F     S D F  N  ++E    I  LP    
Sbjct:    35 SYPISPKWKQIRFLQSQSSSLFYPLRRNFTRFCSSPDGFLRNTKDDEEGNEIIQLPSIGV 94

Query:    94 TPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFAL 153
              P+KF + VV WAS SL+WF+ SGDA AA DSI++S+ GL+IA+ LRR  WPDEAVVFAL
Sbjct:    95 NPVKFAICVVLWASFSLLWFARSGDAKAATDSIKSSSFGLRIASTLRRFGWPDEAVVFAL 154

Query:   154 ATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQ 213
             ATLPV+ELRGAIPVGYWMQLKPV+LT  SVLGNMVPVPFI+LYLK FASF+AGK+++AS+
Sbjct:   155 ATLPVIELRGAIPVGYWMQLKPVVLTSFSVLGNMVPVPFIVLYLKTFASFVAGKSQTASK 214

Query:   214 FLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFF 273
              LD+LF++AKEKAGPVEEF+WLGLMLFVAVPFPGTGAWTGA IA+ILDMPFWSA+S+NF 
Sbjct:   215 LLDILFKRAKEKAGPVEEFKWLGLMLFVAVPFPGTGAWTGAIIASILDMPFWSAVSSNFC 274

Query:   274 GVVIAXXXXXXXXXXXXKYAIVTGAILFIISTFMWSTLRSIRKSLGSS 321
             GVV+A            K AIV G  LF +STFMWS LR+IRKS+  S
Sbjct:   275 GVVLAGLLVNLLVNLGLKQAIVAGIALFFVSTFMWSVLRNIRKSIKPS 322

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

UNIPROTKB|Q3Z8G8 DET0746 "Putative uncharacterized protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 58/163 (35%), Positives = 89/163 (54%)

Query:   145 PDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVL-GNMVPVPFIILYLKKFASF 203
             P E +VF ++ +PV ELRGA+P+   +   P     L  L GN++PVPFI+  L+K  + 
Sbjct:     4 PPELLVFLVSAVPVSELRGALPLAINVLGIPWYWAYLIALAGNLLPVPFILFLLEKVLAL 63

Query:   204 LAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMP 263
             L G      +F D +    K+++ PVE ++ +GL+L VAVP P TGAWTG+ +A +L + 
Sbjct:    64 L-GHFAFIRKFTDWIVDLGKKRSAPVERYKRIGLLLLVAVPLPFTGAWTGSLVAVVLGLD 122

Query:   264 FWSALSANFFGVVIAXXXXXXXXXXXXKYAIVTGAILFIISTF 306
                AL     GVV+A              A++ G +L  ++ F
Sbjct:   123 RKEALIYISLGVVVAGVVVTCLCLLGWFGALMAGLVLSGVAVF 165

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|DET_0746 DET_0746 "conserved hypothetical protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 58/163 (35%), Positives = 89/163 (54%)

Query:   145 PDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVL-GNMVPVPFIILYLKKFASF 203
             P E +VF ++ +PV ELRGA+P+   +   P     L  L GN++PVPFI+  L+K  + 
Sbjct:     4 PPELLVFLVSAVPVSELRGALPLAINVLGIPWYWAYLIALAGNLLPVPFILFLLEKVLAL 63

Query:   204 LAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMP 263
             L G      +F D +    K+++ PVE ++ +GL+L VAVP P TGAWTG+ +A +L + 
Sbjct:    64 L-GHFAFIRKFTDWIVDLGKKRSAPVERYKRIGLLLLVAVPLPFTGAWTGSLVAVVLGLD 122

Query:   264 FWSALSANFFGVVIAXXXXXXXXXXXXKYAIVTGAILFIISTF 306
                AL     GVV+A              A++ G +L  ++ F
Sbjct:   123 RKEALIYISLGVVVAGVVVTCLCLLGWFGALMAGLVLSGVAVF 165


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      322       310   0.00079  116 3  11 22  0.46    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  205 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.98u 0.13s 24.11t   Elapsed:  00:00:01
  Total cpu time:  23.98u 0.13s 24.11t   Elapsed:  00:00:01
  Start:  Fri May 10 05:01:28 2013   End:  Fri May 10 05:01:29 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00028980001 SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (311 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	322
pfam06695	121	pfam06695, Sm_multidrug_ex, Putative small multi-d	5e-42
COG2426	142	COG2426, COG2426, Predicted membrane protein [Func	4e-19

>gnl|CDD|191585 pfam06695, Sm_multidrug_ex, Putative small multi-drug export protein

 Score =  141 bits (358), Expect = 5e-42
 Identities = 55/122 (45%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 160 ELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLF 219
           ELRGAIP G  + L P+   +LSV+GN++PVPFI+L+L+K   +L    +   +  D L 
Sbjct: 1   ELRGAIPYGIALGLPPLEAFILSVIGNLLPVPFILLFLRKVFKWLKRT-KLFKKIYDWLE 59

Query: 220 QKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAG 279
           ++A++ +  VE++ +LGL+LFVA+P PGTGAWTG+  A++L + F  A  A   GV+IAG
Sbjct: 60  RRARKASEKVEKYGFLGLILFVAIPLPGTGAWTGSLAASLLGLDFKKAFPAIALGVLIAG 119

Query: 280 LL 281
           ++
Sbjct: 120 VI 121

This family contains a small number of putative small multi-drug export proteins. Length = 121

>gnl|CDD|225282 COG2426, COG2426, Predicted membrane protein [Function unknown]

 Score = 81.7 bits (202), Expect = 4e-19
 Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 8/141 (5%)

Query: 156 LPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSA---- 211
           +P  ELR AIP+G  + L P+   +LS+LG ++P+  ++  L      +  K +      
Sbjct: 1   MPTFELRYAIPLGLALGLSPLEALLLSILG-VLPLSLLLPLLLDPIDRIMLKLKWTRLQR 59

Query: 212 -SQFLDMLFQKAKEKAGP-VEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALS 269
            +   D L  + + KA   VE + ++GL++FVA+P PGTGAWTGA  A +L +    A +
Sbjct: 60  PACLYDWLVNRTRRKAKGYVERYGFIGLIIFVAIPLPGTGAWTGALAAYLLGIRERFAFA 119

Query: 270 ANFFGVVIAGLLVNLLVNLGL 290
           A   G +I+G +   L ++G+
Sbjct: 120 ALSAGGLISGAVT-TLPSIGI 139

Length = 142

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	322
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	100.0
COG2426	142	Predicted membrane protein [Function unknown]	99.96
PRK10847	219	hypothetical protein; Provisional	98.34
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	97.85
COG0586	208	DedA Uncharacterized membrane-associated protein [	97.44
COG0398	223	Uncharacterized conserved protein [Function unknow	96.63
COG1238	161	Predicted membrane protein [Function unknown]	96.47
PRK07331	322	cobalt transport protein CbiM; Provisional	84.45

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=100.00  E-value=3.7e-38  Score=264.65  Aligned_cols=121  Identities=47%  Similarity=0.824  Sum_probs=117.8

Q ss_pred             hhhhhHHHHHHhCCchHHHHHHHHHhhhhHHHHHHHhHHHHHHHHhcccchhhHHHHHHHHHHhhcccchhhhhHHHHHH
Q 020708          160 ELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLML  239 (322)
Q Consensus       160 ElRgAIPlGIalGL~P~~a~llavlGNmLpVpfIil~~~kI~~wl~kR~~~~kk~~e~~~kRa~kk~~~ieRYG~~GLaL  239 (322)
                      |+|||||+|+++|+||+.++++|++||++|+|+++++++++.+|+++ .+..++++++..+|++|+++++||||++||++
T Consensus         1 ElrgaIP~gi~~Gl~p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~-~~~~~~~~~~~~~k~~~~~~~i~kyg~~GL~l   79 (121)
T PF06695_consen    1 ELRGAIPLGIALGLPPWEAFLLAFLGNILPVPFILLFLDKILKWLKR-KPWLKKFYEWLEKKAEKKSKKIEKYGFWGLAL   79 (121)
T ss_pred             CchhhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            89999999999999999999999999999999999999999999987 67889999999999999889999999999999


Q ss_pred             hhhcCCCcchHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 020708          240 FVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLL  281 (322)
Q Consensus       240 FVAIPLPgTGAwTGALIA~lLGm~~kka~laI~lGVlIAgvI  281 (322)
                      ||+||+|+||+||||++|++|||++++++.++++|+++|++|
T Consensus        80 FVaIPlP~TG~wtgal~a~llg~~~~~~~~ai~~Gv~ia~~I  121 (121)
T PF06695_consen   80 FVAIPLPGTGAWTGALIASLLGMDKKKAFLAIFLGVLIAGVI  121 (121)
T ss_pred             HHhCCCCcchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999985

>COG2426 Predicted membrane protein [Function unknown]

Probab=99.96  E-value=3.8e-29  Score=214.16  Aligned_cols=130  Identities=37%  Similarity=0.663  Sum_probs=116.4

Q ss_pred             cchhhhhhhHHHHHHhCCchHHHHHHHHHhhhhHHHHHH-HhHHHHHHHHhc-ccchhhH---HHHHHHHHHhhcc-cch
Q 020708          156 LPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFII-LYLKKFASFLAG-KNRSASQ---FLDMLFQKAKEKA-GPV  229 (322)
Q Consensus       156 lP~iElRgAIPlGIalGL~P~~a~llavlGNmLpVpfIi-l~~~kI~~wl~k-R~~~~kk---~~e~~~kRa~kk~-~~i  229 (322)
                      +|.+|.|+|||+|++.|++|+++...+++| .+|+++++ .+++.+..++.| ++..+++   ++++..+|++||+ ..+
T Consensus         1 mP~~E~Ryai~~gl~~G~~~~Eal~~silG-vL~l~~lL~~~l~~id~im~kl~~~rl~r~~~lY~~~~~r~~rka~~yV   79 (142)
T COG2426           1 MPTFELRYAIPLGLALGLSPLEALLLSILG-VLPLSLLLPLLLDPIDRIMLKLKWTRLQRPACLYDWLVNRTRRKAKGYV   79 (142)
T ss_pred             CCcccccchhhhHHHhCCCHHHHHHHHHHH-HhhHHHHHHHHHhHHHHHHHHHhhcccCchHHHHHHHHHHHHHhccCcH
Confidence            599999999999999999999999999999 88887777 778877777765 1223455   8999999999985 559


Q ss_pred             hhhhHHHHHHhhhcCCCcchHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHH
Q 020708          230 EEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLV  286 (322)
Q Consensus       230 eRYG~~GLaLFVAIPLPgTGAwTGALIA~lLGm~~kka~laI~lGVlIAgvIVtlls  286 (322)
                      ||||+.||++|||||+|+||+||||+.|+++|++.+.++.++..|+++++.++++.+
T Consensus        80 ER~G~iGL~iFvAIPLP~TG~wtgaLaA~llgI~~r~a~~al~~Gg~is~~vt~l~s  136 (142)
T COG2426          80 ERYGFIGLIIFVAIPLPGTGAWTGALAAYLLGIRERFAFAALSAGGLISGAVTTLPS  136 (142)
T ss_pred             hhhhhhhhhheeeccCCCccHhHHHHHHHHHcCchHHHHHHHHHhhHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999999999998655

>PRK10847 hypothetical protein; Provisional

Probab=98.34  E-value=3.3e-05  Score=70.56  Aligned_cols=179  Identities=16%  Similarity=0.131  Sum_probs=114.7

Q ss_pred             hHHHHHHhhCCchHHHHHHHHHhc-------chhhhhhhHHH-HHHhC-----CchHHHHHHHHHhhhhHHHHHHHhHHH
Q 020708          133 LKIATALRRSSWPDEAVVFALATL-------PVLELRGAIPV-GYWMQ-----LKPVLLTVLSVLGNMVPVPFIILYLKK  199 (322)
Q Consensus       133 ~~~~~~~~~~gl~~~L~VFLLSml-------P~iElRgAIPl-GIalG-----L~P~~a~llavlGNmLpVpfIil~~~k  199 (322)
                      ..+-+++.+.|.+-|..++++.++       |++.-+..+.+ |+..+     +|++.+++++++|+.+---+.++..++
T Consensus        16 ~~~~~~~~~~g~~~y~~lfl~~~le~~~~~~~~lPge~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~   95 (219)
T PRK10847         16 VHLAELVAQYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRL   95 (219)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHhccccCCCCCchHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            355567777787777777766653       55554444443 44432     788999999999999998888888876


Q ss_pred             HHHHHhcccchhhHHHHHHHHHHhhcccchhhhhHHHHHHhhhcCCCcchHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Q 020708          200 FASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAG  279 (322)
Q Consensus       200 I~~wl~kR~~~~kk~~e~~~kRa~kk~~~ieRYG~~GLaLFVAIPLPgTGAwTGALIA~lLGm~~kka~laI~lGVlIAg  279 (322)
                      .-+.+.+|..  ++..+  +++-+|..+.++|||...+.+.=  =+|+... ..+.+|=+.+|+.++-+.+..+|.++++
T Consensus        96 ~G~~~l~~~~--~~~~~--~~~l~~~~~~~~r~G~~~v~i~R--fiP~~R~-~~~~~aG~~~m~~~~F~~~~~lg~~~W~  168 (219)
T PRK10847         96 FGEKLFSNPN--SKIFR--RSYLDKTHQFYEKHGGKTIILAR--FVPIVRT-FAPFVAGMGHMSYRHFAAYNVIGALLWV  168 (219)
T ss_pred             hCHHHhhccc--cccCC--HHHHHHHHHHHHHcCCEEEEeeC--CccchHh-HHHHHhHhcCCChHHHHHHHHHHHHHHH
Confidence            5432221110  11100  12223333458999986555433  4466663 4678899999999999999999999999


Q ss_pred             HHHHHHHH-HH-------HHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 020708          280 LLVNLLVN-LG-------LKYAIVTGAILFIISTFMWSTLRSIRKSL  318 (322)
Q Consensus       280 vIVtlls~-lG-------l~~~~i~giil~~~~~~~w~~~~~~~~~~  318 (322)
                      .+...+-+ +|       ....+++++++..+..+.+..+|+-|+.-
T Consensus       169 ~~~~~~Gy~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  215 (219)
T PRK10847        169 LLFTYAGYFFGTLPFVQDNLKLLIVGIIVVSILPGVIEIWRHKRAAA  215 (219)
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            88776544 22       11124455555555556677888776653

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=97.85  E-value=0.00034  Score=56.27  Aligned_cols=104  Identities=22%  Similarity=0.252  Sum_probs=77.0

Q ss_pred             chHHHHHHHHHhhhhHHHHHHHhHHHHH-HHHhcccchhhHHHHHHHHHHhhcccchhhhhHHHHHHhhhcCC-CcchHH
Q 020708          174 KPVLLTVLSVLGNMVPVPFIILYLKKFA-SFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPF-PGTGAW  251 (322)
Q Consensus       174 ~P~~a~llavlGNmLpVpfIil~~~kI~-~wl~kR~~~~kk~~e~~~kRa~kk~~~ieRYG~~GLaLFVAIPL-PgTGAw  251 (322)
                      +++..++++.+|+++-....++..++.. +...++.+ .++    -.+|-++..+.+||||.+.+.+.-.+|. |.   .
T Consensus        15 g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~g~~~l~~~~~~P~~P~---~   86 (123)
T PF09335_consen   15 GPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLR-KKK----RIKRIERIERWFQKYGFWVLFLSRFIPGLPF---D   86 (123)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc-chH----HHHHHHHHHHHHhhhhHHHHHHHHHHHHccH---H
Confidence            6788899999999999988888888776 33333211 111    1122233445689999998888887773 54   6


Q ss_pred             HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHH
Q 020708          252 TGAFIAAILDMPFWSALSANFFGVVIAGLLVNLL  285 (322)
Q Consensus       252 TGALIA~lLGm~~kka~laI~lGVlIAgvIVtll  285 (322)
                      .-+.++-+.+|+.++-+.+.++|.+.+.++...+
T Consensus        87 ~~~~~ag~~~~~~~~f~~~~~~g~~~~~~~~~~~  120 (123)
T PF09335_consen   87 VVNYLAGITRMPFRRFFLASLIGKLPWTILYVLL  120 (123)
T ss_pred             HHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            6678999999999999999999999999877654

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=97.44  E-value=0.011  Score=53.85  Aligned_cols=127  Identities=18%  Similarity=0.145  Sum_probs=89.3

Q ss_pred             hcchhhhhhhHHHH-HH--h-CCchHHHHHHHHHhhhhHHHHHHHhHHHHHHHHhcccchhhHHHHHHHHHHhhcccchh
Q 020708          155 TLPVLELRGAIPVG-YW--M-QLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVE  230 (322)
Q Consensus       155 mlP~iElRgAIPlG-Ia--l-GL~P~~a~llavlGNmLpVpfIil~~~kI~~wl~kR~~~~kk~~e~~~kRa~kk~~~ie  230 (322)
                      ..|+++-+...+.+ +.  . .+|++.+.+++++|+++---..++..++.-+...+|....+.+   -.++-+|.++.+|
T Consensus        32 ~~~~lPge~iL~~~G~l~~~g~~~~~~~i~~~~lga~lGd~i~Y~iGr~~G~~~l~~~~~~~~~---~~~~l~~a~~~f~  108 (208)
T COG0586          32 VGPPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLGDLISYWIGRRFGRKLLRKLWSYRLL---KRKKLDKAELLFE  108 (208)
T ss_pred             cCCCCCchHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhhhhhccC---CHHHHHHHHHHHH
Confidence            56888888888875 32  2 4889999999999999988888888776654333321111100   0233344445699


Q ss_pred             hhhHHHHHHhhhcCCCcchHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 020708          231 EFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVN  287 (322)
Q Consensus       231 RYG~~GLaLFVAIPLPgTGAwTGALIA~lLGm~~kka~laI~lGVlIAgvIVtlls~  287 (322)
                      |||..-+.+-=-+|.  .= ...++.|=+.+|+.++-..+..+|.++|+.+.+.+.+
T Consensus       109 r~G~~~vf~~RFip~--vR-t~ip~~AG~~~m~~~~F~~~n~~ga~iW~~~~~~lGy  162 (208)
T COG0586         109 RHGLFAIFLGRFIPG--VR-TLVPIVAGMSKMPLRRFLLYNILGALLWALVLTLLGY  162 (208)
T ss_pred             HcCchhhhhhcccch--hH-hhhhHhhhhccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999887777554453  22 4456678889999999999999999999988887766

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=96.63  E-value=0.08  Score=49.28  Aligned_cols=141  Identities=14%  Similarity=0.160  Sum_probs=95.7

Q ss_pred             hHHHHHHhhCCchHHHH----HHHHHhcchhhhhhhHHHHHHhCC--chHHHHHHHHHhhhhHHHHHHHhHHHHHH-HHh
Q 020708          133 LKIATALRRSSWPDEAV----VFALATLPVLELRGAIPVGYWMQL--KPVLLTVLSVLGNMVPVPFIILYLKKFAS-FLA  205 (322)
Q Consensus       133 ~~~~~~~~~~gl~~~L~----VFLLSmlP~iElRgAIPlGIalGL--~P~~a~llavlGNmLpVpfIil~~~kI~~-wl~  205 (322)
                      ..+.+|..+.|.+-.+.    ..+...+|++   -+.++..+.|.  .|+.-.+.+++|-++.-....++.+..-+ |.+
T Consensus        36 ~~l~~~i~~~g~~~pl~~fil~~l~~~~~~i---P~~il~l~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R~~gr~~~~  112 (223)
T COG0398          36 ETLREWIQAYGALGPLVFFILLYLVATLPII---PGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDWVL  112 (223)
T ss_pred             HHHHHHHHHcCchHHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence            45677777777766655    3333344444   44455554443  57888999999999888888887776653 332


Q ss_pred             cccchhhHHHHHHHHHHhhcccchhhhhHHHHHHhhhcCCCcchHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHH
Q 020708          206 GKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLL  285 (322)
Q Consensus       206 kR~~~~kk~~e~~~kRa~kk~~~ieRYG~~GLaLFVAIPLPgTGAwTGALIA~lLGm~~kka~laI~lGVlIAgvIVtll  285 (322)
                      ++..  +      .++-+|-.+.+||.|++-+.+.=.+|  .+..-.-+.+|-+.+++.|+-..+..+|.+-..++.+.+
T Consensus       113 ~~~~--~------~~~~~~~~~~~~~~g~~~i~~lrl~P--~~P~~lvn~aaglt~is~~~f~ias~lG~~P~~i~y~~~  182 (223)
T COG0398         113 KFVG--G------KEKVQRIDAGLERNGFWAILLLRLIP--IFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYL  182 (223)
T ss_pred             HHhc--c------cHHHHHHHHHHHhCChHHHHHHHHhh--cCCHHHHHHHHhccCCcHHHHHHHHHHhcccHHHHHHHH
Confidence            2100  0      02233344558999988888877555  455577789999999999999999999998888777765


Q ss_pred             H
Q 020708          286 V  286 (322)
Q Consensus       286 s  286 (322)
                      -
T Consensus       183 G  183 (223)
T COG0398         183 G  183 (223)
T ss_pred             H
Confidence            5

>COG1238 Predicted membrane protein [Function unknown]

Probab=96.47  E-value=0.1  Score=46.80  Aligned_cols=124  Identities=18%  Similarity=0.157  Sum_probs=86.4

Q ss_pred             HhcchhhhhhhHHHHHHhCCchHHHHHHHHHhhhhHHHHHHHhHHHHHHHHhcccchhhHHHHHHHHHHhhccc-chhhh
Q 020708          154 ATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAG-PVEEF  232 (322)
Q Consensus       154 SmlP~iElRgAIPlGIalGL~P~~a~llavlGNmLpVpfIil~~~kI~~wl~kR~~~~kk~~e~~~kRa~kk~~-~ieRY  232 (322)
                      +.+=.+--+..+.-.+..|.|++....++.+||.+=-..=+++.+...+...++     +... -.++.++..+ ..+||
T Consensus        30 at~lP~~sE~~l~~m~~~~~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~ry  103 (161)
T COG1238          30 ATLLPVPSEVLLAPMLLLGLNAWILALVATLGSVLGGLVNYALGRFLPEFIARR-----WFPG-SEEALEKLQEKWYRRY  103 (161)
T ss_pred             HHhcCCChHHHHHHHHHcCCchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHH-----hhcc-hHHHHHHHHHHHHHHH
Confidence            333334445555555667799999999999999988777777776666555442     1110 1223333333 58999


Q ss_pred             hHHHHHHhhhcCCCcchHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 020708          233 QWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVN  287 (322)
Q Consensus       233 G~~GLaLFVAIPLPgTGAwTGALIA~lLGm~~kka~laI~lGVlIAgvIVtlls~  287 (322)
                      |.+.|.+-..-|+   | =.=|++|=.++++++..+..+++|=..--+.++.+..
T Consensus       104 g~~~ll~s~lp~i---g-d~~t~~aG~~~~~~~~f~~~~~igk~~Ry~~la~~~~  154 (161)
T COG1238         104 GVWTLLLSWLPPI---G-DVLTLLAGWLRLNFLPFILLVFLGKAARYLLLAALTL  154 (161)
T ss_pred             HHHHHHHHhcccc---c-hHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999988775444   4 6778899999999999999999998877777666554

>PRK07331 cobalt transport protein CbiM; Provisional

Probab=84.45  E-value=35  Score=33.82  Aligned_cols=83  Identities=22%  Similarity=0.384  Sum_probs=51.6

Q ss_pred             hhhhhHHHHHHh----hhcCCCc-chHH-H-HHHHHHHhCCchHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Q 020708          229 VEEFQWLGLMLF----VAVPFPG-TGAW-T-GAFIAAILDMPFWSALSANFFGVVIAGLLVN--LLVNLGLKYAIVTGAI  299 (322)
Q Consensus       229 ieRYG~~GLaLF----VAIPLPg-TGAw-T-GALIA~lLGm~~kka~laI~lGVlIAgvIVt--lls~lGl~~~~i~gii  299 (322)
                      .-..|..+-.+|    .-+|+|+ |..+ . +++++.++|  .+.++.++++..++-++..+  .++.+|.+.- ..|++
T Consensus        40 ~pllg~l~A~~F~l~~in~pip~G~s~Hllg~~L~alllG--P~~A~la~~ivLllQallfg~GGl~alGaN~l-~ma~~  116 (322)
T PRK07331         40 MPLLGIAAAFSFLIMMFNVPLPGGTTGHAVGGTLIAILLG--PWAACLAVTVALAIQALLFGDGGILAFGANCF-NMAFI  116 (322)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH-HHHHH
Confidence            566777666555    2357663 3333 3 356666677  67778877777777776554  3344555554 55666


Q ss_pred             HHHHHHHHHHHHHHH
Q 020708          300 LFIISTFMWSTLRSI  314 (322)
Q Consensus       300 l~~~~~~~w~~~~~~  314 (322)
                      ..++++.+|..+|+.
T Consensus       117 ~~~v~y~iyr~~~~~  131 (322)
T PRK07331        117 MPFVGYYIYKFIKKW  131 (322)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            677788888776643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00