Citrus Sinensis ID: 020834

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
Protein Sequence
MGFNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNLMF
Secondary Structure (PSIPRED)
cccEEEccccccccHHHHHHHHHHccccccccccHHHccccHHHHHHHHHHcEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccEEccccccccccEEEEEHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mgfnienftgnigNVPLVLIAALcrdpsnpfaepetcstqMTAYISFGQWVGAIILYTYVFhmlapppegtfdideeslpiknsskdatpapeqipllteeaepkdsnnpkrgkdatpateqipllieeaepkdsknpkrgkIAEVLIFIYEKLKlkqilqppiIASILAMGigavpflkkliftddaplffftdscIILGEAMIPCILLAlggnlvdgpgsaklgfrtTAAIIFGRlvlvppaglgIVTLAdklgfipagDKMFKFVLLLQhtmptsvlSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNLMF
Flexible Loop (DISEMBL)
MGFNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIKNSSKDATPAPEQIPLlteeaepkdsnnpkrgkdatpatEQIPLLieeaepkdsknpkrGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNLMF
Low Complexity Region (SEG)
MGFNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNLMF
Disordered region (IsUnstruct)
***NIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLA****************************************************************************KIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNL**
Disordered Region (DISOPRED)
*GFNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHM******************************************************************************KIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLV*******LGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNLMF
Disordered Region (DISEMBL)
MGFNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIKN********PEQIPLLTEEA****************ATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNLMF
Disordered Region (DISPRO)
*GFNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPP********************************************************************KNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNLMF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGFNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWIILYLNLMF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	321	2.2.26 [Sep-21-2011]
O14197	452	Uncharacterized transport	yes	no	0.875	0.621	0.231	8e-05

>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1

 Score = 48.1 bits (113), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 48/329 (14%)

Query: 11  NIGNVPLVLIAALCRDPSN------PFAEPETCSTQMTAYISFGQWVGAIILYTYVFHML 64
           N  ++PL L+++L     +      P   P+  +++   Y+     +G  + ++Y + +L
Sbjct: 122 NSNSLPLALVSSLATTVKDLLWDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRIL 181

Query: 65  APPPEGTFDIDEESLPIKNSSKDATPA-PEQIPLLTEEAEPKD--SNNPKRGKDATPATE 121
             P +      E+ LPI N S   +    E+I  L   +   D   N+ +  + +T  T+
Sbjct: 182 LSPNQ-----PEDPLPIGNRSWSHSDVNEEEIQNLLASSANVDGVQNSVQANEGSTVQTD 236

Query: 122 QIPLLIEEAEPKDSKNPKRG-------KIAEVLIFIYEKLKLKQILQPPIIASILAMGIG 174
              +   +    ++ N + G       KI++ ++ + +         PP+ +  +A+ I 
Sbjct: 237 SSAISKNDNVQVETSNEEVGGFGAASSKISKFIVLLLD------FFSPPLYSLFIALFIA 290

Query: 175 AVPFLKKLIFTDDAPLFFFTDSCI-----ILGEAMIPCILLALGGNLVDG-----PGSAK 224
            VP L++  F + +    F +  I     + G+  +P IL+ LG +L        P    
Sbjct: 291 VVPPLQRFFFEEGS----FVEGSITSGIRMAGQVAVPMILVVLGASLATDISKTEPTQEV 346

Query: 225 LGFRTTAAII---FGRLVLVPPAGLGIVTLADKLGFIPA-GDKMFKFVLLLQHTMPTSVL 280
                T  II    GR+V+VP A L   +L      I    D +F  V+ L    PT++ 
Sbjct: 347 RKNNDTRVIIVCLLGRMVVVPLALLPAFSLLSYFSEISTVDDPVFVVVIFLLVGSPTAIQ 406

Query: 281 SGAVSSLRGC-GREAAAVLFWVHIFAVFS 308
              +  L G   RE A VL+W   +AVF+
Sbjct: 407 LTQICQLNGVFERECAKVLWWS--YAVFT 433

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
224140641	414	auxin efflux carrier component, auxin tr	0.878	0.681	0.75	1e-129
255582036	416	auxin:hydrogen symporter, putative [Rici	0.878	0.677	0.746	1e-128
224069082	412	predicted protein [Populus trichocarpa]	0.862	0.672	0.739	1e-123
297806009	430	auxin efflux carrier family protein [Ara	0.928	0.693	0.699	1e-122
15241659	431	auxin efflux carrier family protein [Ara	0.940	0.700	0.694	1e-122
225439082	405	PREDICTED: uncharacterized transporter Y	0.878	0.696	0.692	1e-121
296085825	376	unnamed protein product [Vitis vinifera]	0.878	0.75	0.692	1e-121
363806866	377	uncharacterized protein LOC100819622 [Gl	0.881	0.750	0.705	1e-119
356530153	414	PREDICTED: uncharacterized transporter Y	0.881	0.683	0.714	1e-116
357506749	422	Auxin efflux carrier component auxin tra	0.887	0.675	0.697	1e-115

>gi|224140641|ref|XP_002323690.1| auxin efflux carrier component, auxin transport protein [Populus trichocarpa] gi|222868320|gb|EEF05451.1| auxin efflux carrier component, auxin transport protein [Populus trichocarpa]

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/312 (75%), Positives = 258/312 (82%), Gaps = 30/312 (9%)

Query: 10  GNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPE 69
           GNIGNVPLVLIAALCRD SNPF + E CST  TAYISFGQWVGAIILYTYVF+MLAPPPE
Sbjct: 133 GNIGNVPLVLIAALCRDTSNPFGDSEKCSTDGTAYISFGQWVGAIILYTYVFNMLAPPPE 192

Query: 70  GTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEE 129
           GTFDIDE +LPIK  +KDA                                EQ+PLL +E
Sbjct: 193 GTFDIDEPNLPIKKPAKDA------------------------------PMEQVPLLAQE 222

Query: 130 AEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAP 189
             P +   PKRGKI ++L+F+Y+KLKLKQILQPPIIASILAM +GAVPFLK+LIFT D+P
Sbjct: 223 EAPAEPDAPKRGKIKQILVFLYDKLKLKQILQPPIIASILAMFLGAVPFLKQLIFTTDSP 282

Query: 190 LFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIV 249
           LFFFTDSC ILGEAMIPCILLALGGNLVDGPGS+KLGFRTTAAIIFGRLVLVPP GLGIV
Sbjct: 283 LFFFTDSCNILGEAMIPCILLALGGNLVDGPGSSKLGFRTTAAIIFGRLVLVPPTGLGIV 342

Query: 250 TLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSM 309
            LADKLGF+PAGDKMF+FVLLLQHTMPTSVLSGAV++LRGCGREAAAVLFWVHIFA+FSM
Sbjct: 343 MLADKLGFLPAGDKMFRFVLLLQHTMPTSVLSGAVANLRGCGREAAAVLFWVHIFAIFSM 402

Query: 310 AGWIILYLNLMF 321
           AGWI+LYLN++F
Sbjct: 403 AGWIVLYLNILF 414

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582036|ref|XP_002531815.1| auxin:hydrogen symporter, putative [Ricinus communis] gi|223528549|gb|EEF30572.1| auxin:hydrogen symporter, putative [Ricinus communis]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/312 (74%), Positives = 261/312 (83%), Gaps = 30/312 (9%)

Query: 10  GNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPE 69
           GNIGNVPLVLIAALCRD SNPF + ETCST  TAYISFGQWVGAIILYTYVFHMLAPPPE
Sbjct: 135 GNIGNVPLVLIAALCRDTSNPFGDSETCSTDGTAYISFGQWVGAIILYTYVFHMLAPPPE 194

Query: 70  GTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEE 129
           GTFDI++ +LPIK++ KD T  PEQ+PLLT E  P DS       DA+            
Sbjct: 195 GTFDIEDGNLPIKDTPKDGT--PEQVPLLTHEDLPTDS-------DAS------------ 233

Query: 130 AEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAP 189
                    K+GK  E+L+++YEKLKLKQILQPPIIASILAM +GAVPF K+LIFT DAP
Sbjct: 234 ---------KQGKFKEILMYLYEKLKLKQILQPPIIASILAMFLGAVPFFKRLIFTTDAP 284

Query: 190 LFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIV 249
           L+FFTDSC ILGEAMIPCILLALGGNLVDGPG++KLG RTTAAIIF RL+LVPPAGLGIV
Sbjct: 285 LYFFTDSCNILGEAMIPCILLALGGNLVDGPGTSKLGLRTTAAIIFARLLLVPPAGLGIV 344

Query: 250 TLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSM 309
            LADKLGF+PAGDKMF+FVLLLQH+MPTSVL+GAV++LRGCGREAAAVLFWVHIFAVFSM
Sbjct: 345 MLADKLGFLPAGDKMFRFVLLLQHSMPTSVLAGAVANLRGCGREAAAVLFWVHIFAVFSM 404

Query: 310 AGWIILYLNLMF 321
           AGWI+LYLN++F
Sbjct: 405 AGWIVLYLNILF 416

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069082|ref|XP_002326270.1| predicted protein [Populus trichocarpa] gi|222833463|gb|EEE71940.1| predicted protein [Populus trichocarpa]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/307 (73%), Positives = 253/307 (82%), Gaps = 30/307 (9%)

Query: 15  VPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDI 74
           VPLVLIAALCRD SNPF + E CST  TAYISFGQWVGAIILYTYVF+MLAPPPE TFDI
Sbjct: 136 VPLVLIAALCRDTSNPFGDSEKCSTDGTAYISFGQWVGAIILYTYVFNMLAPPPEVTFDI 195

Query: 75  DEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKD 134
           ++ +L IK+ +KDA P                              EQ+PLL++E  P++
Sbjct: 196 EDANLSIKSPAKDAPP------------------------------EQVPLLLQEDAPEE 225

Query: 135 SKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFT 194
               KRGKI + L+F+Y KLKLKQILQPPIIASILAM +GAVPFLK+ IFT DAPLFFFT
Sbjct: 226 LDALKRGKIKQFLVFLYVKLKLKQILQPPIIASILAMFLGAVPFLKRSIFTTDAPLFFFT 285

Query: 195 DSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADK 254
           DSC+ILGEAMIPCILLALGGNL+DGPGS+KLGFRTTAAIIFGRLVLVPPAGLGIVTLADK
Sbjct: 286 DSCMILGEAMIPCILLALGGNLIDGPGSSKLGFRTTAAIIFGRLVLVPPAGLGIVTLADK 345

Query: 255 LGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWII 314
           LGF+P GDKMFKFVLLLQHTMPTSVLSGAV++LRGCGREAAAVLFWVHIFA+FSMAGWI+
Sbjct: 346 LGFLPPGDKMFKFVLLLQHTMPTSVLSGAVANLRGCGREAAAVLFWVHIFAIFSMAGWIV 405

Query: 315 LYLNLMF 321
           LYLNL+F
Sbjct: 406 LYLNLLF 412

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806009|ref|XP_002870888.1| auxin efflux carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297316725|gb|EFH47147.1| auxin efflux carrier family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/313 (69%), Positives = 261/313 (83%), Gaps = 15/313 (4%)

Query: 9   TGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPP 68
            GNIGNVPLVL+AALCRD SNPF + E CS   TAYISFGQWVGAIILYTYV+ M APPP
Sbjct: 133 VGNIGNVPLVLLAALCRDTSNPFGDSEKCSIDGTAYISFGQWVGAIILYTYVYQMFAPPP 192

Query: 69  EGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIE 128
           EG FD +EE+L +KN   D TP  EQ+PLLT+       N PK   D +P  + +P  ++
Sbjct: 193 EG-FDAEEENLALKNLPVDTTP--EQVPLLTQ-------NFPK---DFSPTQDLLP--VQ 237

Query: 129 EAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDA 188
             EP+     ++GKI ++ +F+YEKLKLKQI+QP I+ASILAM +GA+PF KK IFT+ A
Sbjct: 238 STEPRGRVVSRKGKITQIFVFLYEKLKLKQIVQPAIVASILAMILGAIPFTKKFIFTNGA 297

Query: 189 PLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGI 248
           PLFFFTDSC+ILG+AMIPCILLALGGNL++GPGS+KLGF+TTAAIIFGRLVLVPP GLGI
Sbjct: 298 PLFFFTDSCMILGDAMIPCILLALGGNLINGPGSSKLGFKTTAAIIFGRLVLVPPVGLGI 357

Query: 249 VTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFS 308
           VTLADKLGF+PA DKMF+FVLLLQHTMPTSVLSGAV++LRGCGRE+AAVLFWVHIFA+FS
Sbjct: 358 VTLADKLGFLPADDKMFRFVLLLQHTMPTSVLSGAVANLRGCGRESAAVLFWVHIFAIFS 417

Query: 309 MAGWIILYLNLMF 321
           MAGW++LY+N++F
Sbjct: 418 MAGWMVLYINILF 430

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15241659|ref|NP_195819.1| auxin efflux carrier family protein [Arabidopsis thaliana] gi|7340673|emb|CAB82972.1| putative protein [Arabidopsis thaliana] gi|332003034|gb|AED90417.1| auxin efflux carrier family protein [Arabidopsis thaliana]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/317 (69%), Positives = 264/317 (83%), Gaps = 15/317 (4%)

Query: 5   IENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHML 64
           I+   GNIGNVPLVL+AALCRD SNPF + E CS   TAYISFGQWVGAIILYTYV+ M 
Sbjct: 130 IQIGVGNIGNVPLVLLAALCRDTSNPFGDSEKCSIDGTAYISFGQWVGAIILYTYVYQMF 189

Query: 65  APPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIP 124
           APPPEG FD +EE+L +K    DA  APEQ+PLLT+       N PK   D +P  + +P
Sbjct: 190 APPPEG-FDAEEENLALKTLPVDA--APEQVPLLTQ-------NFPK---DFSPTQDLLP 236

Query: 125 LLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIF 184
             ++  EP+     ++GKIA++ +F+YEKLKLKQI+QP I+ASILAM +GA+PF KKLIF
Sbjct: 237 --VQSTEPRGRGVSRKGKIAQIFVFLYEKLKLKQIVQPAIVASILAMILGAIPFTKKLIF 294

Query: 185 TDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPA 244
           T+ APLFFFTDSC+ILG+AMIPCILLALGGNL++GPGS+KLGF+TTAAII GRLVLVPP 
Sbjct: 295 TNGAPLFFFTDSCMILGDAMIPCILLALGGNLINGPGSSKLGFKTTAAIIIGRLVLVPPV 354

Query: 245 GLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIF 304
           GLGIVT+ADKLGF+PA DKMF+FVLLLQHTMPTSVLSGAV++LRGCGRE+AAVLFWVHIF
Sbjct: 355 GLGIVTVADKLGFLPADDKMFRFVLLLQHTMPTSVLSGAVANLRGCGRESAAVLFWVHIF 414

Query: 305 AVFSMAGWIILYLNLMF 321
           A+FSMAGW++LY+N++F
Sbjct: 415 AIFSMAGWMVLYINILF 431

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439082|ref|XP_002267734.1| PREDICTED: uncharacterized transporter YBR287W [Vitis vinifera]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/312 (69%), Positives = 251/312 (80%), Gaps = 30/312 (9%)

Query: 10  GNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPE 69
           GNIGNVPLVL+ ALCRD +NPF + +TC+ Q TAYISFGQWVGAI+LYTYVF MLAPPPE
Sbjct: 124 GNIGNVPLVLLTALCRDQNNPFGDVDTCTKQGTAYISFGQWVGAIVLYTYVFQMLAPPPE 183

Query: 70  GTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEE 129
           GTFD+DE+ LPIK   KD +P                              EQ+PLL +E
Sbjct: 184 GTFDLDEQHLPIKGCPKDGSP------------------------------EQVPLLTQE 213

Query: 130 AEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAP 189
               D    K+GKI + L+++Y+KLK+KQILQPPIIASILA+ IGA+PFLKKLIFT +AP
Sbjct: 214 VLSSDLNASKQGKIKDFLVYMYDKLKIKQILQPPIIASILALAIGAIPFLKKLIFTPNAP 273

Query: 190 LFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIV 249
           LFFFTDS IILGEAMIPCILLALGGNLVDGPGS+KLG RTT AIIFGRLVLVPPAG+GIV
Sbjct: 274 LFFFTDSLIILGEAMIPCILLALGGNLVDGPGSSKLGLRTTTAIIFGRLVLVPPAGIGIV 333

Query: 250 TLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSM 309
            LADKLGF+P  DKMF+FVLLLQH+MPTSVLSGA+++LRGCGRE+AAVLFWVHIFA+FSM
Sbjct: 334 LLADKLGFLPPDDKMFRFVLLLQHSMPTSVLSGAIANLRGCGRESAAVLFWVHIFAIFSM 393

Query: 310 AGWIILYLNLMF 321
           AGWI+LYL+++F
Sbjct: 394 AGWIVLYLHILF 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085825|emb|CBI31149.3| unnamed protein product [Vitis vinifera]

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/312 (69%), Positives = 251/312 (80%), Gaps = 30/312 (9%)

Query: 10  GNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPE 69
           GNIGNVPLVL+ ALCRD +NPF + +TC+ Q TAYISFGQWVGAI+LYTYVF MLAPPPE
Sbjct: 95  GNIGNVPLVLLTALCRDQNNPFGDVDTCTKQGTAYISFGQWVGAIVLYTYVFQMLAPPPE 154

Query: 70  GTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEE 129
           GTFD+DE+ LPIK   KD +P                              EQ+PLL +E
Sbjct: 155 GTFDLDEQHLPIKGCPKDGSP------------------------------EQVPLLTQE 184

Query: 130 AEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAP 189
               D    K+GKI + L+++Y+KLK+KQILQPPIIASILA+ IGA+PFLKKLIFT +AP
Sbjct: 185 VLSSDLNASKQGKIKDFLVYMYDKLKIKQILQPPIIASILALAIGAIPFLKKLIFTPNAP 244

Query: 190 LFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIV 249
           LFFFTDS IILGEAMIPCILLALGGNLVDGPGS+KLG RTT AIIFGRLVLVPPAG+GIV
Sbjct: 245 LFFFTDSLIILGEAMIPCILLALGGNLVDGPGSSKLGLRTTTAIIFGRLVLVPPAGIGIV 304

Query: 250 TLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSM 309
            LADKLGF+P  DKMF+FVLLLQH+MPTSVLSGA+++LRGCGRE+AAVLFWVHIFA+FSM
Sbjct: 305 LLADKLGFLPPDDKMFRFVLLLQHSMPTSVLSGAIANLRGCGRESAAVLFWVHIFAIFSM 364

Query: 310 AGWIILYLNLMF 321
           AGWI+LYL+++F
Sbjct: 365 AGWIVLYLHILF 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806866|ref|NP_001242551.1| uncharacterized protein LOC100819622 [Glycine max] gi|255645863|gb|ACU23422.1| unknown [Glycine max]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/312 (70%), Positives = 251/312 (80%), Gaps = 29/312 (9%)

Query: 10  GNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPE 69
           GNIGNVPLVLI+ALCRD SNPF + E CST  TAYISFGQWVGAIILYTYVF MLAPPPE
Sbjct: 95  GNIGNVPLVLISALCRDQSNPFGDMEKCSTDGTAYISFGQWVGAIILYTYVFQMLAPPPE 154

Query: 70  GTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEE 129
           G+F+ID ES+P+K+     TP                        DATP  EQ PLL +E
Sbjct: 155 GSFEIDNESVPLKS-----TPM----------------------SDATP--EQAPLLAKE 185

Query: 130 AEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAP 189
                +   K+ +I +VL F+YEKLKLKQILQPPIIASILAM +GA+PFLKKLIFT D P
Sbjct: 186 EGVTSTAQNKKWEIKDVLAFLYEKLKLKQILQPPIIASILAMTLGAIPFLKKLIFTPDGP 245

Query: 190 LFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIV 249
           LFFFTDSC+ILGEAMIPCILLALGGNL+DGPGS+KLGF+TTAAIIF RL++VPP GLGIV
Sbjct: 246 LFFFTDSCMILGEAMIPCILLALGGNLIDGPGSSKLGFQTTAAIIFARLLIVPPVGLGIV 305

Query: 250 TLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSM 309
            LADKLGF+P  DKMF+FVLLLQH+MPTSV +GAV++LRGCGR+AAAVLFWVHIFA+FSM
Sbjct: 306 MLADKLGFLPPDDKMFRFVLLLQHSMPTSVFAGAVANLRGCGRDAAAVLFWVHIFAIFSM 365

Query: 310 AGWIILYLNLMF 321
           AGWIILYLN++F
Sbjct: 366 AGWIILYLNILF 377

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530153|ref|XP_003533648.1| PREDICTED: uncharacterized transporter YBR287W-like [Glycine max]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/312 (71%), Positives = 251/312 (80%), Gaps = 29/312 (9%)

Query: 10  GNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPE 69
           GNIGNVPLVLI+ALCRD SNPF + E CST  TAY+SFGQWVGAIILYTYVF MLAPPPE
Sbjct: 132 GNIGNVPLVLISALCRDQSNPFGDMEKCSTDGTAYVSFGQWVGAIILYTYVFQMLAPPPE 191

Query: 70  GTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEE 129
           GTF+ID ES+P+K     +TP                        DATP  EQ PLL  E
Sbjct: 192 GTFEIDNESVPLK-----STPM----------------------SDATP--EQAPLLANE 222

Query: 130 AEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAP 189
                +   K+ +I +VL F+YEKLKLKQILQPPIIASILAM +GA+PFLKKLIFT D P
Sbjct: 223 EGVTSTAQNKKWEIKDVLAFLYEKLKLKQILQPPIIASILAMTLGAIPFLKKLIFTPDGP 282

Query: 190 LFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIV 249
           LFFFTDSC+ILGEAMIPCILLALGGNL+DGPGS+KLGFRTTAAIIF RL+LVP  GLGIV
Sbjct: 283 LFFFTDSCMILGEAMIPCILLALGGNLIDGPGSSKLGFRTTAAIIFARLLLVPLVGLGIV 342

Query: 250 TLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSM 309
           TLADKLGF+P+ DKMF+FVLLLQH+MPTSVL+GAV++LRGCGR AAAVLFWVHIFA+FSM
Sbjct: 343 TLADKLGFLPSDDKMFRFVLLLQHSMPTSVLAGAVANLRGCGRNAAAVLFWVHIFAIFSM 402

Query: 310 AGWIILYLNLMF 321
           AGWIILYLN++F
Sbjct: 403 AGWIILYLNILF 414

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506749|ref|XP_003623663.1| Auxin efflux carrier component auxin transport protein [Medicago truncatula] gi|355498678|gb|AES79881.1| Auxin efflux carrier component auxin transport protein [Medicago truncatula]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/307 (69%), Positives = 243/307 (79%), Gaps = 22/307 (7%)

Query: 15  VPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDI 74
           VPLVLI ALCRD +NPF +   CST  TAYISFGQWVGAIILYTYVF+MLAPPPEGTFDI
Sbjct: 138 VPLVLIGALCRDQNNPFGDSLKCSTDGTAYISFGQWVGAIILYTYVFNMLAPPPEGTFDI 197

Query: 75  DEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKD 134
           D E LPIK++      APEQ PLL +E    + +N                L+       
Sbjct: 198 DNERLPIKSTPVKTDVAPEQTPLLAQEEGDTEGDN----------------LVS------ 235

Query: 135 SKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFT 194
           S    + KI  +L  +Y+KLKLKQILQPPIIASILAM +GAVPFLKKLIFT +APLFFFT
Sbjct: 236 SSASGKSKIKVILALVYDKLKLKQILQPPIIASILAMTLGAVPFLKKLIFTPEAPLFFFT 295

Query: 195 DSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADK 254
           DSC+ILGEAMIPCILLALGGNL+DGPGS+KLGF+TTAAI+F RLVLVPP GLGIV LADK
Sbjct: 296 DSCMILGEAMIPCILLALGGNLIDGPGSSKLGFKTTAAIVFARLVLVPPVGLGIVMLADK 355

Query: 255 LGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSMAGWII 314
           LGF+P  DKMF+FVLLLQH+MPTSVLSGAV++LRGCGREAAAVLFWVHIFAV SMA WI+
Sbjct: 356 LGFLPPDDKMFRFVLLLQHSMPTSVLSGAVANLRGCGREAAAVLFWVHIFAVISMAVWIV 415

Query: 315 LYLNLMF 321
           LYL+++F
Sbjct: 416 LYLSILF 422

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
TAIR|locus:2185123	431	AT5G01990 "AT5G01990" [Arabido	0.925	0.689	0.701	8.2e-115
TAIR|locus:2026366	457	AT1G71090 "AT1G71090" [Arabido	0.956	0.671	0.399	8.6e-56
TAIR|locus:2053908	396	AT2G17500 [Arabidopsis thalian	0.598	0.484	0.333	7.4e-40
TAIR|locus:2156847	395	AT5G65980 "AT5G65980" [Arabido	0.641	0.521	0.306	1.4e-25
TAIR|locus:2011746	415	AT1G76530 "AT1G76530" [Arabido	0.922	0.713	0.264	1.7e-24
TAIR|locus:2011731	390	AT1G76520 "AT1G76520" [Arabido	0.616	0.507	0.295	2.6e-24
CGD|CAL0001802	446	orf19.733 [Candida albicans (t	0.869	0.625	0.250	7.6e-09
UNIPROTKB|Q59TZ9	446	ZSP12 "Potential Auxin Efflux	0.869	0.625	0.250	7.6e-09
POMBASE|SPAC5D6.04	452	SPAC5D6.04 "auxin family trans	0.928	0.659	0.233	2.2e-08
CGD|CAL0005962	446	orf19.6117 [Candida albicans (	0.869	0.625	0.247	2.8e-08

TAIR|locus:2185123 AT5G01990 "AT5G01990" [Arabidopsis thaliana (taxid:3702)]

 Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
 Identities = 219/312 (70%), Positives = 262/312 (83%)

Query:    10 GNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPE 69
             GNIGNVPLVL+AALCRD SNPF + E CS   TAYISFGQWVGAIILYTYV+ M APPPE
Sbjct:   135 GNIGNVPLVLLAALCRDTSNPFGDSEKCSIDGTAYISFGQWVGAIILYTYVYQMFAPPPE 194

Query:    70 GTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEE 129
             G FD +EE+L +K    DA  APEQ+PLLT+       N PK   D +P  + +P  ++ 
Sbjct:   195 G-FDAEEENLALKTLPVDA--APEQVPLLTQ-------NFPK---DFSPTQDLLP--VQS 239

Query:   130 AEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAP 189
              EP+     ++GKIA++ +F+YEKLKLKQI+QP I+ASILAM +GA+PF KKLIFT+ AP
Sbjct:   240 TEPRGRGVSRKGKIAQIFVFLYEKLKLKQIVQPAIVASILAMILGAIPFTKKLIFTNGAP 299

Query:   190 LFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIV 249
             LFFFTDSC+ILG+AMIPCILLALGGNL++GPGS+KLGF+TTAAII GRLVLVPP GLGIV
Sbjct:   300 LFFFTDSCMILGDAMIPCILLALGGNLINGPGSSKLGFKTTAAIIIGRLVLVPPVGLGIV 359

Query:   250 TLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLFWVHIFAVFSM 309
             T+ADKLGF+PA DKMF+FVLLLQHTMPTSVLSGAV++LRGCGRE+AAVLFWVHIFA+FSM
Sbjct:   360 TVADKLGFLPADDKMFRFVLLLQHTMPTSVLSGAVANLRGCGRESAAVLFWVHIFAIFSM 419

Query:   310 AGWIILYLNLMF 321
             AGW++LY+N++F
Sbjct:   420 AGWMVLYINILF 431

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2026366 AT1G71090 "AT1G71090" [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 131/328 (39%), Positives = 201/328 (61%)

Query:    10 GNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPE 69
             GN GN+ L +++++C   +NPF  P  C+++  +Y+SF QWV  I++YT V+HM+ PP E
Sbjct:   123 GNTGNLLLAIVSSVCHTKTNPFG-PN-CNSRGVSYVSFAQWVAVILVYTVVYHMMEPPLE 180

Query:    70 GTFDIDEESLPIKNSSKDATPAPEQIPLLTE--EAEPKDSNNPKRGKDATPATEQIPLLI 127
                 ++EE + I+  + +   A   + +  E    E K++ + K    A      I    
Sbjct:   181 YYEVVEEEGVEIEEINVENHDASRPLLVEAEWPGIEDKETEHCKTPFIAR-VFNSISSFS 239

Query:   128 EEAEPK---------DSKNPKRGK-IAEVLIF-----IYEKLKLKQILQPPIIASILAMG 172
             + + P+         +S +P+  + +AE  +      + E+  +K ILQPP IAS+LA+ 
Sbjct:   240 QTSFPEVDLGGEYGGESSSPRSIQCLAEPRVMRRIRVVAEQTPVKHILQPPTIASLLAII 299

Query:   173 IGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAA 232
             IG+VP LK ++F  DAPL F TDS  I+G AM+P ++L LGG L +GP  + LG RTT  
Sbjct:   300 IGSVPQLKSVVFGYDAPLSFITDSLNIMGSAMVPSVMLVLGGMLSEGPNESTLGLRTTIG 359

Query:   233 IIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG- 291
             I   RL+++P  G+GIV  ADKLG I + D MFKFVLLLQ++ P+++L GA++SLRG   
Sbjct:   360 ISVARLLVLPLVGIGIVMSADKLGLISSADPMFKFVLLLQYSTPSAILLGAIASLRGYAV 419

Query:   292 REAAAVLFWVHIFAVFSMAGWIILYLNL 319
             REA+A+LFW HIFA+ S+  +I+++  L
Sbjct:   420 REASALLFWQHIFALLSLTFYIVIFFKL 447

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2053908 AT2G17500 [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
 Identities = 66/198 (33%), Positives = 115/198 (58%)

Query:   126 LIEEAEPKDSK--NPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLI 183
             L+   E K++K    K G   + + F++E L+  ++L PP + +I+    GAV +L+ LI
Sbjct:   201 LLGAPEDKENKVVKEKTGFWRKGVDFLHEILE--ELLAPPTLGAIIGFIFGAVRWLRNLI 258

Query:   184 FTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPP 243
               DDAPL     +  +LG+  IPC+ + LGGNL+ G  S+ +       I+  R + +P 
Sbjct:   259 IGDDAPLRIVQSTAKLLGDGTIPCMTIILGGNLIQGLRSSAVKPMVVLGIVCVRYIAMPI 318

Query:   244 AGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGREAAAVLF-WVH 302
              G+GIV  A  LGF+PA D +F++VL+LQ T+P ++  G ++ L    ++  +VL  W +
Sbjct:   319 IGIGIVLTAANLGFLPA-DPLFQYVLMLQFTLPPAMNIGTMTQLYNVAQDECSVLMLWTY 377

Query:   303 IFAVFSMAGWIILYLNLM 320
             + A+ ++  W  ++L+L+
Sbjct:   378 LVAILALTVWSTIFLHLL 395

GO:0009507 "chloroplast" evidence=ISM

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2156847 AT5G65980 "AT5G65980" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 66/215 (30%), Positives = 120/215 (55%)

Query:   109 NPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLK--LKQILQPPIIA 166
             +P +  D+ P      LL++  + +D +   + K++    +I + L   L+++  PP I 
Sbjct:   186 SPNKDIDSDPHA----LLLKPHQNQDLEIQGKQKVS-TRTYIKDLLHQILEELFAPPTIG 240

Query:   167 SILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLG 226
             +IL    GA  +L+ LI  ++APL    DS  +LGE  IPCI L LGGNL+ G  S+ + 
Sbjct:   241 AILGFVFGATNWLRNLIIGENAPLRVIQDSVKLLGEGTIPCITLILGGNLIQGLRSSAVK 300

Query:   227 FRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSS 286
                   +I  R +L+P  G+G+V LA  LG++P  D +F++VL+LQ  +P ++    ++ 
Sbjct:   301 KSVIVGVIIVRYILLPVVGVGVVQLAGNLGYLPP-DPLFRYVLMLQFALPPAMNISTMAQ 359

Query:   287 LRGCGREAAAVLF-WVHIFAVFSMAGWIILYLNLM 320
             L    ++  +V+F W ++ A  ++  W  ++L+++
Sbjct:   360 LFDVAQDECSVIFLWTYLVASLALTVWSTIFLSIL 394

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2011746 AT1G76530 "AT1G76530" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.7e-24, P = 1.7e-24
 Identities = 84/318 (26%), Positives = 155/318 (48%)

Query:     9 TGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPP 68
             +GN+G +PL++I A+C++   PF + E+C      Y++       I +Y +  +      
Sbjct:   113 SGNLGTMPLIIIPAICKEKGGPFGDSESCEKYGMGYVTLSMTAFFISVYKHDTNWYVSGG 172

Query:    69 EGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIE 128
              G   +D   L I N  +  + +P  +   T   E   SN      D +   + I    E
Sbjct:   173 NGLL-MD---LYI-NLMRVLSNSP--VETHTHSIE---SNY-----DDSCKVQLISSKEE 217

Query:   129 EAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDA 188
             E E  + +  +  ++ + ++ + +K+ L  I  P  IA+I+A+ IG +  L+ LI    A
Sbjct:   218 EKEEDNHQVGRWEEVKQRVVSLSKKVNLGSIFAPATIAAIIALVIGLITPLRNLIIGTVA 277

Query:   189 PLFFFTDSCIILGEAMIPCILLALGGNLVDGPG-----SAKLGFRTTAAIIFGRLVLVPP 243
             P     DS  +LG+  IP + L LGGNL+ G       S+++       ++  R +L+P 
Sbjct:   278 PFRVIQDSLTLLGDGAIPAMTLILGGNLLKGMRRSEVRSSEMKNSCIIGVLVARYILLPV 337

Query:   244 AGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGR-EAAAVLFWVH 302
             +G+ +V  A KL  + + + +++FVLLLQ+ +P ++  G  + L G G  E + ++ W +
Sbjct:   338 SGVLLVRGAYKLDLVTS-EPLYQFVLLLQYAVPPAMNLGTKTQLFGAGESECSVIMLWTY 396

Query:   303 IFAVFSMAGWIILYLNLM 320
               A  S+  W   ++ L+
Sbjct:   397 SLAAVSLTVWPTFFMWLV 414

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2011731 AT1G76520 "AT1G76520" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 59/200 (29%), Positives = 114/200 (57%)

Query:   122 QIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKK 181
             ++PL+  + E  + K  +  K+   L+ + +K+ LK I  P  IA+++A+ IG +  L+K
Sbjct:   191 KVPLISSKEEENNQKAGRWEKVKRRLVSLSQKVNLKTIFAPSTIAAMIALVIGLITPLRK 250

Query:   182 LIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLV 241
             LI   +APL    DS  ++G+  +P + + +GGNL+ G  S+ +   +   ++  R VL+
Sbjct:   251 LIIGTEAPLRVLQDSVTLVGDGAVPAMTMIIGGNLLKGLRSSGMKMSSIIGVLVARYVLL 310

Query:   242 PPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGR-EAAAVLFW 300
             P +G+ IV  A KL  + + + +++FVLLLQ+ +P ++  G ++ L G G  E + ++ W
Sbjct:   311 PMSGVLIVRGAYKLDLVTS-EPLYQFVLLLQYAVPPAMNLGTITQLFGTGESECSVIMLW 369

Query:   301 VHIFAVFSMAGWIILYLNLM 320
              +  A  ++  W   ++ L+
Sbjct:   370 TYSLASIALTVWPTFFMWLV 389

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015824 "proline transport" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

CGD|CAL0001802 orf19.733 [Candida albicans (taxid:5476)]

 Score = 159 (61.0 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 80/319 (25%), Positives = 139/319 (43%)

Query:    10 GNIGNVPLVLIAALCRD-PSNPFAEPETCSTQMTA-----YISFGQWVGAIILYTYVFHM 63
             GN  ++P+ L+  L    P   + + E  +T   A     Y+   Q +G I+ +++ F+ 
Sbjct:   127 GNSNSLPVSLVLTLSYTLPDLLWDDVEDDNTDKVAGRGILYLLIFQQLGQILRWSWGFNT 186

Query:    64 LAPPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEP---KDSNNPKRGKDATPAT 120
             L         ++  +   K+         E   L+  E E     DSN  +  +  T  T
Sbjct:   187 LLRKRS---QLELNTYHTKHGK---IVLHENCRLIDGEDEQFLYMDSNQQQE-EQQTETT 239

Query:   121 EQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQ---PPIIASILAMGIGAVP 177
              +I L    +E +D+ N K      +  +I +   +KQ L    PP+ A ++A+ + ++P
Sbjct:   240 REISL----SEDEDNINSK-----PLTAYICQLPGVKQFLSFMNPPLYAMLVAIIVASIP 290

Query:   178 FLKKLIF-TDDAPLFF--FTDSCIILGEAMIPCILLALGGNLV---DGPGSAKLGFRTTA 231
             +LK LIF ++   + +  FT +   LG   IP IL+ LG NL    D P  +K   R   
Sbjct:   291 YLKNLIFDSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYLSNDIPPPSKHYNRILF 350

Query:   232 AIIFGRLVLVPPAGLGIVTLADKLGFIPAG---DKMFKFVLLLQHTMPTSVLSGAVSSLR 288
               +  R++L     L I+ L  K  +I A    D +F  V  +    P ++    ++ L 
Sbjct:   351 GSLLSRMILPSAVLLPIIALCVK--YIKASILDDPIFLIVAFILTVSPPAIQLSQITQLN 408

Query:   289 GC-GREAAAVLFWVHIFAV 306
                 +E + VLFW ++  V
Sbjct:   409 NVYQKEMSGVLFWGYVVLV 427

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|Q59TZ9 ZSP12 "Potential Auxin Efflux Carrier protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 159 (61.0 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 80/319 (25%), Positives = 139/319 (43%)

Query:    10 GNIGNVPLVLIAALCRD-PSNPFAEPETCSTQMTA-----YISFGQWVGAIILYTYVFHM 63
             GN  ++P+ L+  L    P   + + E  +T   A     Y+   Q +G I+ +++ F+ 
Sbjct:   127 GNSNSLPVSLVLTLSYTLPDLLWDDVEDDNTDKVAGRGILYLLIFQQLGQILRWSWGFNT 186

Query:    64 LAPPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEP---KDSNNPKRGKDATPAT 120
             L         ++  +   K+         E   L+  E E     DSN  +  +  T  T
Sbjct:   187 LLRKRS---QLELNTYHTKHGK---IVLHENCRLIDGEDEQFLYMDSNQQQE-EQQTETT 239

Query:   121 EQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQ---PPIIASILAMGIGAVP 177
              +I L    +E +D+ N K      +  +I +   +KQ L    PP+ A ++A+ + ++P
Sbjct:   240 REISL----SEDEDNINSK-----PLTAYICQLPGVKQFLSFMNPPLYAMLVAIIVASIP 290

Query:   178 FLKKLIF-TDDAPLFF--FTDSCIILGEAMIPCILLALGGNLV---DGPGSAKLGFRTTA 231
             +LK LIF ++   + +  FT +   LG   IP IL+ LG NL    D P  +K   R   
Sbjct:   291 YLKNLIFDSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYLSNDIPPPSKHYNRILF 350

Query:   232 AIIFGRLVLVPPAGLGIVTLADKLGFIPAG---DKMFKFVLLLQHTMPTSVLSGAVSSLR 288
               +  R++L     L I+ L  K  +I A    D +F  V  +    P ++    ++ L 
Sbjct:   351 GSLLSRMILPSAVLLPIIALCVK--YIKASILDDPIFLIVAFILTVSPPAIQLSQITQLN 408

Query:   289 GC-GREAAAVLFWVHIFAV 306
                 +E + VLFW ++  V
Sbjct:   409 NVYQKEMSGVLFWGYVVLV 427

GO:0003674 "molecular_function" evidence=ND

POMBASE|SPAC5D6.04 SPAC5D6.04 "auxin family transmembrane transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 76/326 (23%), Positives = 137/326 (42%)

Query:    11 NIGNVPLVLIAALCRDPSN------PFAEPETCSTQMTAYISFGQWVGAIILYTYVFHML 64
             N  ++PL L+++L     +      P   P+  +++   Y+     +G  + ++Y + +L
Sbjct:   122 NSNSLPLALVSSLATTVKDLLWDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRIL 181

Query:    65 APPPEGTFDIDEESLPIKNSSKDATPA-PEQIPLLTEEAEPKDS--NNPKRGKDATPATE 121
               P +      E+ LPI N S   +    E+I  L   +   D   N+ +  + +T  T+
Sbjct:   182 LSPNQ-----PEDPLPIGNRSWSHSDVNEEEIQNLLASSANVDGVQNSVQANEGSTVQTD 236

Query:   122 QIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLK-QILQPPIIASILAMGIGAVPFLK 180
                +   +    ++ N + G        I + + L      PP+ +  +A+ I  VP L+
Sbjct:   237 SSAISKNDNVQVETSNEEVGGFGAASSKISKFIVLLLDFFSPPLYSLFIALFIAVVPPLQ 296

Query:   181 KLIFTDDAPLF-FFTDSCIILGEAMIPCILLALGGNLVDG-----PGSAKLGFRTTAAII 234
             +  F + + +    T    + G+  +P IL+ LG +L        P         T  II
Sbjct:   297 RFFFEEGSFVEGSITSGIRMAGQVAVPMILVVLGASLATDISKTEPTQEVRKNNDTRVII 356

Query:   235 ---FGRLVLVPPAGLGIVTLADKLGFIPA-GDKMFKFVLLLQHTMPTSVLSGAVSSLRGC 290
                 GR+V+VP A L   +L      I    D +F  V+ L    PT++    +  L G 
Sbjct:   357 VCLLGRMVVVPLALLPAFSLLSYFSEISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGV 416

Query:   291 -GREAAAVLFWVHIFAVFSMAGWIIL 315
               RE A VL+W   +AVF+    ++L
Sbjct:   417 FERECAKVLWWS--YAVFTPPNSLLL 440

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016021 "integral to membrane" evidence=ISM

GO:0022857 "transmembrane transporter activity" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISM

CGD|CAL0005962 orf19.6117 [Candida albicans (taxid:5476)]

 Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 79/319 (24%), Positives = 139/319 (43%)

Query:    10 GNIGNVPLVLIAALCRD-PSNPFAEPETCSTQMTA-----YISFGQWVGAIILYTYVFHM 63
             GN  ++P+ L+  L    P   + + E  +T   A     Y+   Q +G I+ +++ F+ 
Sbjct:   127 GNSNSLPVSLVLTLSYTLPDLLWDDVEDDNTDKVAGRGILYLLIFQQLGQILRWSWGFNT 186

Query:    64 LAPPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEP---KDSNNPKRGKDATPAT 120
             L         ++  +   K+         E   L+  E E     DS+  +  +  T  T
Sbjct:   187 LLRKRS---QLELNTYHTKHGK---IVLHENCRLIDGEDEQFLYMDSHQQQE-EQQTETT 239

Query:   121 EQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQ---PPIIASILAMGIGAVP 177
              +I L    +E +D+ N K      +  +I +   +KQ L    PP+ A ++A+ + ++P
Sbjct:   240 REISL----SEDEDNINSK-----PLTAYICQLPGVKQFLSFMNPPLYAMLVAIIVASIP 290

Query:   178 FLKKLIF-TDDAPLFF--FTDSCIILGEAMIPCILLALGGNLV---DGPGSAKLGFRTTA 231
             +LK LIF ++   + +  FT +   LG   IP IL+ LG NL    D P  +K   R   
Sbjct:   291 YLKNLIFDSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYPSNDIPPPSKHYNRILF 350

Query:   232 AIIFGRLVLVPPAGLGIVTLADKLGFIPAG---DKMFKFVLLLQHTMPTSVLSGAVSSLR 288
               +  R++L     L I+ L  K  +I A    D +F  V  +    P ++    ++ L 
Sbjct:   351 GSLLSRMILPSAVLLPIIALCVK--YIKASILDDPIFLIVAFILTVSPPAIQLSQITQLN 408

Query:   289 GC-GREAAAVLFWVHIFAV 306
                 +E + VLFW ++  V
Sbjct:   409 NVYQKEMSGVLFWGYVVLV 427

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	321
pfam03547	321	pfam03547, Mem_trans, Membrane transport protein	5e-31
COG0679	311	COG0679, COG0679, Predicted permeases [General fun	3e-04

>gnl|CDD|217608 pfam03547, Mem_trans, Membrane transport protein

 Score =  118 bits (298), Expect = 5e-31
 Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 14/191 (7%)

Query: 125 LLIEEAEPKDSKNPKRG-KIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLI 183
            LIE    K  K+ + G     + + I   + LK IL PP  AS+L + +G V FL  LI
Sbjct: 143 FLIESRGAKRDKSEESGDTSGSMTLLILIVVLLKLILNPPTYASLLGLILGLVGFLLPLI 202

Query: 184 FTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVPP 243
           F +     F  DS  ILG+A IP  L +LG  L  G   + LG  T    +  RL+L+P 
Sbjct: 203 FPE-----FIQDSISILGDAAIPMALFSLGLTLALGKLKSSLGAATATIHLILRLILMPL 257

Query: 244 AGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVH 302
             LGIV L    G       +   V +L+  +P +++ G ++ L      EA+ V+FW  
Sbjct: 258 VMLGIVLLLGLRG-------LTLLVAILEAALPPAIVLGVIAQLYNVDEEEASTVVFWTT 310

Query: 303 IFAVFSMAGWI 313
           + A+ ++  WI
Sbjct: 311 LLALLTLPLWI 321

This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life. Length = 321

>gnl|CDD|223751 COG0679, COG0679, Predicted permeases [General function prediction only]

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 19/162 (11%)

Query: 156 LKQILQ-PPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGG 214
           LK++L  P IIA IL + +  +           +       +  +L  A  P  L+ALG 
Sbjct: 162 LKKLLTNPLIIALILGLLLNLLGI---------SLPAPLDTAVDLLASAASPLALIALGL 212

Query: 215 NLVDGPGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHT 274
           +L                 +  +L+L P   L +  L   LG       +   VL+L   
Sbjct: 213 SL-AFLKLKGSKPPIILIALSLKLLLAPLVALLVAKL---LGL----SGLALQVLVLLSA 264

Query: 275 MPTSVLSGAVSSLRGCGRE-AAAVLFWVHIFAVFSMAGWIIL 315
           MPT+V +  ++   G     AA+ +    + ++ ++   I+L
Sbjct: 265 MPTAVNAYVLARQYGGDPRLAASTILLSTLLSLLTLPLLILL 306

Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	321
KOG2722	408	consensus Predicted membrane protein [Function unk	100.0
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	100.0
TIGR00946	321	2a69 he Auxin Efflux Carrier (AEC) Family.	99.93
PRK09903	314	putative transporter YfdV; Provisional	99.93
COG0679	311	Predicted permeases [General function prediction o	99.91
TIGR00841	286	bass bile acid transporter. Functionally character	98.81
TIGR00832	328	acr3 arsenical-resistance protein. The first prote	98.03
PF01758	187	SBF: Sodium Bile acid symporter family; InterPro:	98.02
COG0385	319	Predicted Na+-dependent transporter [General funct	97.96
PF13593	313	DUF4137: SBF-like CPA transporter family (DUF4137)	97.32
COG0798	342	ACR3 Arsenite efflux pump ACR3 and related permeas	95.21
PF04172	215	LrgB: LrgB-like family ; InterPro: IPR007300 The t	80.66

>KOG2722 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=2.6e-61  Score=449.83  Aligned_cols=296  Identities=39%  Similarity=0.704  Sum_probs=240.1

Q ss_pred             eEEEecCCCCchHHHHHHHhhcCCCCCCCChhHHHHhHHHHHHHHHHhhhhheeceeeecccCCCCCC-cccccCCCCcc
Q 020834            4 NIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGT-FDIDEESLPIK   82 (321)
Q Consensus         4 ~a~~~f~N~gsLPl~Li~sL~~~~~~p~g~~~~~~~rg~~Y~~~~~~vg~~l~ws~g~~ll~~~~~~~-~~~~~~~~~~~   82 (321)
                      +|||+|||+||||++|++|+|+++++||||+|.|.+||++|++++|++|++++||||||++.+++.+. .+.++++-  +
T Consensus       111 ia~~a~GN~gnlpL~Lv~alc~~~~~Pfg~~~~c~s~Gi~Y~sf~~~lg~il~wty~Y~~~~~p~~~~~~~~~~~~V--e  188 (408)
T KOG2722|consen  111 IACCAFGNSGNLPLILVPALCDEDGIPFGNREKCASRGISYVSFSQQLGQILRWTYVYRMLLPPNLELMSALKESPV--E  188 (408)
T ss_pred             EEEeecCCcCCcHHHHhHHHhcccCCCCCChhhhhhcchhHHHHHHHhhhhEEEEEEeeeecCCchhhhhcCChhhh--h
Confidence            58999999999999999999999999999999999999999999999999999999999998874321 11111100  0


Q ss_pred             CCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcchhhHHHHHHHHHhhhhhhhcCh
Q 020834           83 NSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQP  162 (321)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~nP  162 (321)
                      +..       ++.|     .++       ...++|++++++++.+.++++++. ...+.+.+++.+....+..+|++++|
T Consensus       189 ~~~-------~~~~-----~~s-------~e~~~~~~~k~~ll~~~en~~~~~-~g~~~~~~~~~~~~~~~~~L~~i~~P  248 (408)
T KOG2722|consen  189 ALL-------ESVP-----QPS-------VESDEDSTCKTLLLASKENRNNQV-VGREGKVKRRSVSLSEKVILKEIFAP  248 (408)
T ss_pred             hhh-------hccC-----CCC-------cccccccccccccccccccCCCce-eeccccceEEEeehhHHhhHHHhcCc
Confidence            000       0011     000       011112223333333333322211 11222222233333344558999999


Q ss_pred             hHHHHHHHHHHhhhhhhhhhhccCCCcchhHHHHHHHhccchhHHHHHHhhhhhcCCCCCCCcCchHHHHHHHHHHhHHH
Q 020834          163 PIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVP  242 (321)
Q Consensus       163 ~iia~i~g~ii~~ip~l~~~f~~~~~~l~~i~~~l~~lG~~~vPl~livlG~~L~~~~~~~~~~~~~i~~~~~~Rlil~P  242 (321)
                      |++|+++|++++.+||||+++|++++|+++++|+++++|++++|+.++++|++|.++++++.++.+.+++++++|++++|
T Consensus       249 ptia~iiA~vigai~pLr~lifg~~apl~~itdsv~llG~~~IP~illvLGgnL~~g~~ss~~~~~~iigiii~R~illP  328 (408)
T KOG2722|consen  249 PTIAAIIALVIGAIPPLRRLIFGEDAPLRVITDSVTLLGDGAIPCILLVLGGNLIQGLRSSALKTSVIIGIIIGRYILLP  328 (408)
T ss_pred             hHHHHHHHHHHhcchHHHHHhhccCchHHHHHHHHHHhccccchhhhhhhccccccCchhcccCceEEEEEEEeeeeccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 020834          243 PAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILYLNLMF  321 (321)
Q Consensus       243 ~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~~~~~~  321 (321)
                      +++++++..+.++|+++.+||+|++|+++|.++|||+++.++||++|.. +|||.+++|+|+++.+.+++|+++|+|+++
T Consensus       329 ~~gl~iv~~A~kl~~ls~~DPlF~~VllLq~~~PpAi~lg~itqL~g~~e~Ecs~il~W~y~va~l~ltvw~~~f~~lv~  408 (408)
T KOG2722|consen  329 LVGLGIVRLADKLGLLSTDDPLFQFVLLLQYASPPAINLGTITQLNGVAERECSVILFWTYAVASLSLTVWSVFFLWLVV  408 (408)
T ss_pred             hhhHHHHHHHHHhCcCCCCCchhhhhhhhhhcCCchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhC
Confidence            9999999999999999966999999999999999999999999999999 999999999999999999999999999874

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=100.00  E-value=5.7e-34  Score=276.45  Aligned_cols=284  Identities=30%  Similarity=0.457  Sum_probs=193.5

Q ss_pred             CceEEEecCCCCchHHHHHHHhhcCCCCCCCChhHHHHhHHHHHHHHHHhhhhheeceeeecccCCCCCCcccccCCCCc
Q 020834            2 GFNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPI   81 (321)
Q Consensus         2 ~~~a~~~f~N~gsLPl~Li~sL~~~~~~p~g~~~~~~~rg~~Y~~~~~~vg~~l~ws~g~~ll~~~~~~~~~~~~~~~~~   81 (321)
                      .+..||+|+|++++|+++++++       +|      ++|++|+.++.++++++.|++|+.++..++++.++.++++...
T Consensus        96 ~~~~~~~~~N~~~lglpi~~~l-------~g------~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~  162 (385)
T PF03547_consen   96 VFVLAASFGNTGFLGLPILQAL-------FG------ERGVAYAIIFDVVNNIILWSLGYFLLESRSEKEDKSEEEPSSA  162 (385)
T ss_pred             EEEecccCCcchhhHHHHHHHH-------hc------chhhhhehHHHHhhHHHHHHHHHHhhccccccccccccccccc
Confidence            3577899999999999999999       55      4999999999999999999999999997654422222111100


Q ss_pred             cC--CCCCCCCCC---CCCCcccccCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcchhhHHHHHHHHHhhhh
Q 020834           82 KN--SSKDATPAP---EQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKL  156 (321)
Q Consensus        82 ~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (321)
                      +.  +++++.++.   ++.+...++....++.. +..+...++++++... ...++ +.++..+.+..+..+....+..+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  239 (385)
T PF03547_consen  163 ESIDSEQEDSDEMSLDGSSPSSTEEEIDEDGSP-SSTPSQSSASAPSSVS-TSPSP-SNSTGAEQKSSNSTRKKLKKSIL  239 (385)
T ss_pred             ccccccccCCccccCCcccccccccccccCCcc-cccccccccccchhhc-cCCcc-cccchhhhhhhhhHHHHHHHHHH
Confidence            00  000000000   00000000000000000 0000000000000000 00000 11111222222333333333346


Q ss_pred             hhhcChhHHHHHHHHHHhhhhhhhhhhccCCCcchhHHHHHHHhccchhHHHHHHhhhhhcCCCCCCCcCchHHHHHHHH
Q 020834          157 KQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFG  236 (321)
Q Consensus       157 k~l~nP~iia~i~g~ii~~ip~l~~~f~~~~~~l~~i~~~l~~lG~~~vPl~livlG~~L~~~~~~~~~~~~~i~~~~~~  236 (321)
                      |.++||+++|+++|++++++|+.+++++.     .++.++++++|++++|++|+++|++|++.+.....+++.....++.
T Consensus       240 ~~~~nP~~~a~~lgli~~~~~~~~~~~~~-----~~i~~~~~~lg~~~~pl~l~~lG~~l~~~~~~~~~~~~~~~~~~~~  314 (385)
T PF03547_consen  240 KLFKNPPLIAIILGLIIGLIPPLRPLFFP-----SFITDSLSYLGAAAVPLALFVLGASLARGPRKSALGWKPSIIAVLV  314 (385)
T ss_pred             HHHhCcHHHHHHHHHHHHHHHHhcccchH-----hHHHHHHHHHHhhhHHHHHHHHHHHHhcCCcccchhhHHHHHHHHH
Confidence            88899999999999999999998887665     7899999999999999999999999998644555667777778999


Q ss_pred             HHhHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHH
Q 020834          237 RLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWI  313 (321)
Q Consensus       237 Rlil~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~  313 (321)
                      |++++|++++++++++.      . |+....++++++++|+|++..++|++||.+ +++|..++|||+++++|+|+|+
T Consensus       315 rlii~P~i~~~~~~~~~------l-~~~~~~~~~~~~~~P~a~~~~~~a~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  385 (385)
T PF03547_consen  315 RLIILPLIGIGIVFLLG------L-DGDMARVLILQAAMPTAINSFVIASLYGLDEEEASSIVFWSTLLSIPTLPLWI  385 (385)
T ss_pred             HHHHHHHHHHHHHHHHC------C-CHHHHHHHHHhccCCchHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999988532      2 777888999999999999999999999999 9999999999999999999995

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family

Probab=99.93  E-value=1.5e-25  Score=213.17  Aligned_cols=213  Identities=22%  Similarity=0.281  Sum_probs=167.6

Q ss_pred             ceEEEecCCCCchHHHHHHHhhcCCCCCCCChhHHHHhH---HHHHHHHHHhhhhheeceeeecccCCCCCCcccccCCC
Q 020834            3 FNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQM---TAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESL   79 (321)
Q Consensus         3 ~~a~~~f~N~gsLPl~Li~sL~~~~~~p~g~~~~~~~rg---~~Y~~~~~~vg~~l~ws~g~~ll~~~~~~~~~~~~~~~   79 (321)
                      +..++.|+|++++.+++++++       ||      ++|   ..|...+.....++.|++|+.+....+.+     .   
T Consensus       103 ~~~~~~~~N~~~~GlPl~~~~-------~G------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---  161 (321)
T TIGR00946       103 FLLVSALPNTAFIGYPLLLSL-------FG------EEGAKILIAALFIDTGAVLMTIALGLFLVSEDGAG-----G---  161 (321)
T ss_pred             HHHHhhhccceeehHHHHHHH-------hc------ccchhhhHHHHHHHhccchhHHHHHHHHhcccccc-----c---
Confidence            456789999999999999999       77      344   77888888888899999998655322100     0   


Q ss_pred             CccCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcchhhHHHHHHHHHhhhhhhh
Q 020834           80 PIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQI  159 (321)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l  159 (321)
                                                                         +  +++    ++.++..++.+    .|.+
T Consensus       162 ---------------------------------------------------~--~~~----~~~~~~~~~~~----~~~~  180 (321)
T TIGR00946       162 ---------------------------------------------------E--GSG----ESTRLMLIFVW----KKLI  180 (321)
T ss_pred             ---------------------------------------------------c--ccc----hhHHHHHHHHH----HHHH
Confidence                                                               0  000    01111111111    2455


Q ss_pred             cChhHHHHHHHHHHhhhhhhhhhhccCCCcc-hhHHHHHHHhccchhHHHHHHhhhhhcCCCCCCCcCchHHHHHHHHHH
Q 020834          160 LQPPIIASILAMGIGAVPFLKKLIFTDDAPL-FFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRL  238 (321)
Q Consensus       160 ~nP~iia~i~g~ii~~ip~l~~~f~~~~~~l-~~i~~~l~~lG~~~vPl~livlG~~L~~~~~~~~~~~~~i~~~~~~Rl  238 (321)
                      +||+++|+++|+++..++          .++ .++.++++++|++++|++|+++|+.+...  +.+.+++.++..+++|+
T Consensus       181 ~nP~iia~i~Gl~~~~~~----------i~lP~~l~~~l~~lg~~~~plaLl~lG~~l~~~--~~~~~~~~~~~~~~~kl  248 (321)
T TIGR00946       181 KFPPLWAPLLSVILSLVG----------FKMPGLILKSISILSGATTPMALFSLGLALSPR--KIKLGVRDAILALIVRF  248 (321)
T ss_pred             hCCChHHHHHHHHHHHHh----------hcCcHHHHHHHHHHHHHHHHHHHHHHHHhhChh--hhccChHHHHHHHHHHH
Confidence            799999999999999875          334 69999999999999999999999999763  22334678899999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHH
Q 020834          239 VLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILY  316 (321)
Q Consensus       239 il~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~  316 (321)
                      ++.|++++.+...      ++. |+..+.++++++|||+|.+..++|++||.| +++++.+++||++|++|+|+|+.++
T Consensus       249 il~P~i~~~~~~~------~~l-~~~~~~~~vl~aa~P~a~~~~i~A~~y~~~~~~aa~~v~~sT~ls~~tlp~~~~l~  320 (321)
T TIGR00946       249 LVQPAVMAGISKL------IGL-RGLELSVAILQAALPGGAVAAVLATEYEVDVELASTAVTLSTVLSLISLPLFIILL  320 (321)
T ss_pred             HHHHHHHHHHHHH------hCC-ChHHHHHHHHHHcCChhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999887653      344 788899999999999999999999999999 9999999999999999999999864

>PRK09903 putative transporter YfdV; Provisional

Probab=99.93  E-value=7.6e-25  Score=208.00  Aligned_cols=208  Identities=16%  Similarity=0.145  Sum_probs=162.1

Q ss_pred             eEEEecCCCCchHHHHHHHhhcCCCCCCCChhHHHHhHHHHHHHHHHhhhhheeceeeecccCCCCCCcccccCCCCccC
Q 020834            4 NIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIKN   83 (321)
Q Consensus         4 ~a~~~f~N~gsLPl~Li~sL~~~~~~p~g~~~~~~~rg~~Y~~~~~~vg~~l~ws~g~~ll~~~~~~~~~~~~~~~~~~~   83 (321)
                      ..+++++|+|++.+++++++       ||+...   -|+.|..++. ++|++.|++|..+++..+.+    +        
T Consensus       101 ~~~~~~~N~gf~G~Pl~~~~-------~G~~~~---~~~~~a~~~~-~~~~~~~~~g~~~~~~~~~~----~--------  157 (314)
T PRK09903        101 ALIAGSPTIGFLGFAVLDPI-------YGDSVS---TGLVVAIISI-IVNAITIPIGLYLLNPSSGA----D--------  157 (314)
T ss_pred             hhhhcCCCcccccHHHHHHH-------cCchhh---hhhHHHHHHH-HHHHHHHHHHHHHHcccccc----c--------
Confidence            34678899999999999999       773211   1555555544 68999999998888643100    0        


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcchhhHHHHHHHHHhhhhhhhcChh
Q 020834           84 SSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQPP  163 (321)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~nP~  163 (321)
                                                                     +  + +    +..++.+        .+.++||+
T Consensus       158 -----------------------------------------------~--~-~----~~~~~~l--------~~~~~nP~  175 (314)
T PRK09903        158 -----------------------------------------------G--K-K----NSNLSAL--------ISAAKEPV  175 (314)
T ss_pred             -----------------------------------------------c--c-c----chHHHHH--------HHHHhchH
Confidence                                                           0  0 0    0001122        14467999


Q ss_pred             HHHHHHHHHHhhhhhhhhhhccCCCcc-hhHHHHHHHhccchhHHHHHHhhhhhcCCCCCCCcCchHHHHHHHHHHhHHH
Q 020834          164 IIASILAMGIGAVPFLKKLIFTDDAPL-FFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLVP  242 (321)
Q Consensus       164 iia~i~g~ii~~ip~l~~~f~~~~~~l-~~i~~~l~~lG~~~vPl~livlG~~L~~~~~~~~~~~~~i~~~~~~Rlil~P  242 (321)
                      ++|+++|+++.+.+          .++ .++.++++++|++++|++|+++|++|++. +. +. .+..+...+.|+++.|
T Consensus       176 iia~~~gl~~~l~~----------i~lP~~i~~~l~~lg~~~~PlaL~~iG~~L~~~-~~-~~-~~~~~~~~~~Kli~~P  242 (314)
T PRK09903        176 VWAPVLATILVLVG----------VKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAH-KF-EF-SAEIAYNTFLKLILMP  242 (314)
T ss_pred             HHHHHHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cc-cc-cHHHHHHHHHHHHHHH
Confidence            99999999998753          444 69999999999999999999999999984 22 22 3567788999999999


Q ss_pred             HHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHH
Q 020834          243 PAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILY  316 (321)
Q Consensus       243 ~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~  316 (321)
                      ++.+.+...      .+. |+....++++++|||+|.+..++|++||.| +.+++.++.||++|++|+|+|++++
T Consensus       243 ~i~~~~~~~------~~l-~~~~~~v~vl~aa~P~a~~~~i~A~~y~~~~~~aa~~v~~sTlls~iTlpl~~~l~  310 (314)
T PRK09903        243 LALLLVGMA------CHL-NSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVS  310 (314)
T ss_pred             HHHHHHHHH------cCC-CcHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999776553      243 778899999999999999999999999999 9999999999999999999999874

>COG0679 Predicted permeases [General function prediction only]

Probab=99.91  E-value=5.7e-24  Score=201.84  Aligned_cols=209  Identities=24%  Similarity=0.286  Sum_probs=175.2

Q ss_pred             ceEEEecCCCCchHHHHHHHhhcCCCCCCCChhHHHHhHHHHHHHHHHhhhhheeceeeecccCCCCCCcccccCCCCcc
Q 020834            3 FNIENFTGNIGNVPLVLIAALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIK   82 (321)
Q Consensus         3 ~~a~~~f~N~gsLPl~Li~sL~~~~~~p~g~~~~~~~rg~~Y~~~~~~vg~~l~ws~g~~ll~~~~~~~~~~~~~~~~~~   82 (321)
                      +..+.+|+|+|++++++..++       +|      ++|++|..+|..+++++.|++|+..+...+++            
T Consensus        99 ~~~~~~~~N~g~lg~pi~~~~-------~G------~~gl~~~~i~~~~~~~~~~~~g~~~l~~~~~~------------  153 (311)
T COG0679          99 FALASAFPNIGFLGLPVALSL-------FG------EKGLAYAVIFLIIGLFLMFTLGVILLARSGGG------------  153 (311)
T ss_pred             HHHHHHhcccchhhHHHHHHH-------cC------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------------
Confidence            556789999999999999999       88      79999999999999999999999999764311            


Q ss_pred             CCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcchhhHHHHHHHHHhhhhhhhcCh
Q 020834           83 NSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEVLIFIYEKLKLKQILQP  162 (321)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~nP  162 (321)
                                                                         + +    ...++..        .+.+.||
T Consensus       154 ---------------------------------------------------~-~----~~~~~~~--------~~~~~nP  169 (311)
T COG0679         154 ---------------------------------------------------T-N----KSLLSVL--------KKLLTNP  169 (311)
T ss_pred             ---------------------------------------------------c-h----hHHHHHH--------HHHHhCc
Confidence                                                               0 0    0111111        2566799


Q ss_pred             hHHHHHHHHHHhhhhhhhhhhccCCCcc-hhHHHHHHHhccchhHHHHHHhhhhhcCCCCCCCcCchHHHHHHHHHHhHH
Q 020834          163 PIIASILAMGIGAVPFLKKLIFTDDAPL-FFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFGRLVLV  241 (321)
Q Consensus       163 ~iia~i~g~ii~~ip~l~~~f~~~~~~l-~~i~~~l~~lG~~~vPl~livlG~~L~~~~~~~~~~~~~i~~~~~~Rlil~  241 (321)
                      +++|.++|+++...+          ..+ .++.++++++|++++|++|+++|++|+. .+.++...+.++.....|+++.
T Consensus       170 ~i~a~i~g~~~~~~~----------i~lP~~~~~~~~~l~~a~~pl~li~lG~~L~~-~~~~~~~~~~~~~~~~~kll~~  238 (311)
T COG0679         170 LIIALILGLLLNLLG----------ISLPAPLDTAVDLLASAASPLALIALGLSLAF-LKLKGSKPPIILIALSLKLLLA  238 (311)
T ss_pred             HHHHHHHHHHHHHcC----------CCCcHHHHHHHHHHHHhhhhHHHHHHhhhcch-hhhccccchhHHHHHHHHHHHH
Confidence            999999999999864          333 5999999999999999999999999998 3455566777777888899999


Q ss_pred             HHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020834          242 PPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILYLN  318 (321)
Q Consensus       242 P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~~~  318 (321)
                      |++++.+.++      ++. ++....+++++.|||+|.+..++|++||.| +.++..++.||++|++|+|.|..++.+
T Consensus       239 Pl~~~~~~~~------~~l-~~~~~~v~vl~~a~P~A~~~~v~a~~~~~~~~laa~~i~ist~ls~~t~p~~~~~l~~  309 (311)
T COG0679         239 PLVALLVAKL------LGL-SGLALQVLVLLSAMPTAVNAYVLARQYGGDPRLAASTILLSTLLSLLTLPLLILLLLR  309 (311)
T ss_pred             HHHHHHHHHH------cCC-ChHHHHHHHHHhhCcHHhHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998764      233 666679999999999999999999999999 999999999999999999999887765

>TIGR00841 bass bile acid transporter

Probab=98.81  E-value=1.5e-08  Score=95.27  Aligned_cols=107  Identities=12%  Similarity=0.118  Sum_probs=90.0

Q ss_pred             hhHHHHHHhhhhhcCCCCCCC-c-CchHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHH
Q 020834          204 MIPCILLALGGNLVDGPGSAK-L-GFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLS  281 (321)
Q Consensus       204 ~vPl~livlG~~L~~~~~~~~-~-~~~~i~~~~~~Rlil~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~  281 (321)
                      ...+.|+.+|+++... +.++ . +.+.+....+.|++++|++++.+.+.      ++. ||.....+++.+++|+|.+.
T Consensus        13 ~l~~~m~~~G~~l~~~-~~~~~~~~p~~~~~~~~~~~vi~Plla~~l~~~------~~l-~~~~~~glvL~~~~P~~~~s   84 (286)
T TIGR00841        13 LLFLIMFSMGCTLEFE-DFKGHLRKPWGVIIGLLAQYGIMPLTGFLLAKV------FKL-PPELAVGVLIVGCCPGGTAS   84 (286)
T ss_pred             HHHHHHHHccCCCcHH-HHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH------hCC-CHHHHHHHHheeeCCCchHH
Confidence            3677899999998763 2222 1 34677788889999999999888763      233 88899999999999999999


Q ss_pred             HHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020834          282 GAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILYLN  318 (321)
Q Consensus       282 ~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~~~  318 (321)
                      .++++++|.| +.++..+..+|++|++|+|+|+.++..
T Consensus        85 ~v~t~~~~gn~~la~~~~~~stlls~vt~Pl~l~~~~~  122 (286)
T TIGR00841        85 NVFTYLLKGDMALSISMTTCSTLLALGMMPLLLYIYAK  122 (286)
T ss_pred             HHHHHHhCCCHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999 888999999999999999999998865

Functionally characterized members of the BASS family catalyze Na+:bile acid symport. These systems have been identified in intestinal, liver and kidney tissues of animals. These symporters exhibit broad specificity, taking up a variety of non bile organic compounds as well as taurocholate and other bile salts. Functionally uncharacterised homologues are found in plants, yeast, archaea and bacteria.

>TIGR00832 acr3 arsenical-resistance protein

Probab=98.03  E-value=8.8e-05  Score=71.22  Aligned_cols=140  Identities=13%  Similarity=0.044  Sum_probs=99.3

Q ss_pred             ChhHHHHHHHHHHhhhhhhhhhhccCCCcchhHHHHHHHhccchhHH------HHHHhhhhhcCCCCCCC--cCchHHHH
Q 020834          161 QPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPC------ILLALGGNLVDGPGSAK--LGFRTTAA  232 (321)
Q Consensus       161 nP~iia~i~g~ii~~ip~l~~~f~~~~~~l~~i~~~l~~lG~~~vPl------~livlG~~L~~~~~~~~--~~~~~i~~  232 (321)
                      ...++++++|++++..-|         ....+....  .+.....|+      .|+.+|.++... +.++  .++|.+..
T Consensus        10 ~~~~~~~i~~~~~g~~~P---------~~~~~~~~~--~~~~~~~~~~~~l~~mmf~mgl~L~~~-df~~~~~~pk~~~~   77 (328)
T TIGR00832        10 LWIFLAIAAGVGLGVLFP---------SVFQALAAL--EVATVSIPIAIGLILMMYPPLAKVDYS-ALGDVFKDPKGLIL   77 (328)
T ss_pred             HHHHHHHHHHHHHHHhcc---------ccHHHHHHH--HhhhhHHHHHHHHHHHHHHhhhcCCHH-HHHHHHcCchHHHH
Confidence            345677777888877432         111222111  223455553      566666666442 2111  14688999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHH
Q 020834          233 IIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAG  311 (321)
Q Consensus       233 ~~~~Rlil~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi  311 (321)
                      ..+.-++++|++++.+.+.     +++. +|.+..-+++.+++|.+.....++...++| .........+++++++++|.
T Consensus        78 ~~~~qfvi~Plla~~l~~l-----~~~~-~p~l~~GliLv~~~Pgg~~S~v~T~lAkGnvalsv~lt~~stLl~~~~~P~  151 (328)
T TIGR00832        78 SLFINWIIGPFLMFLLAWL-----FLRD-LFEYIAGLILLGLARCIAMVFVWNQLAKGDPEYTLVLVAVNSLFQVFLYAP  151 (328)
T ss_pred             HHHHHHHHHHHHHHHHHHH-----HcCC-CHHHHHHHHHHHhcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999764     2243 777888899999999999999999999999 76666678999999999999


Q ss_pred             HHHHHHH
Q 020834          312 WIILYLN  318 (321)
Q Consensus       312 ~~~l~~~  318 (321)
                      ++.++..
T Consensus       152 l~~ll~~  158 (328)
T TIGR00832       152 LAWLLLG  158 (328)
T ss_pred             HHHHHHh
Confidence            9887754

The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport.

>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes

Probab=98.02  E-value=5e-05  Score=66.91  Aligned_cols=107  Identities=16%  Similarity=0.250  Sum_probs=78.8

Q ss_pred             hHHHHHHhhhhhcCCCCCCCc--CchHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHH
Q 020834          205 IPCILLALGGNLVDGPGSAKL--GFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSG  282 (321)
Q Consensus       205 vPl~livlG~~L~~~~~~~~~--~~~~i~~~~~~Rlil~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~  282 (321)
                      +-+.|+.+|.++... +.++.  +.+.+....+..++++|++++.+.+.     +++. +|.+..-+++.+++|.+....
T Consensus         4 l~~~mf~~gl~~~~~-~l~~~~~~p~~l~~~l~~~~~i~Plla~~l~~~-----~~~~-~~~~~~Gl~l~~~~P~~~~s~   76 (187)
T PF01758_consen    4 LFLMMFSMGLSLTFE-DLRRVLRRPKLLLIGLLAQFLIMPLLAFGLAWL-----LLPL-SPALALGLLLVAACPGGPASN   76 (187)
T ss_dssp             HHHHHHHHHHC--GG-GGHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-H-----HTT---HHHHHHHHHHHHS-B-THHH
T ss_pred             hhHHHHHhhhcccHH-HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHH-----HhcC-CHHHHHHHHHHhcCCcHHHHH
Confidence            345677777777552 22211  35677788899999999999999732     2344 888899999999999999999


Q ss_pred             HHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020834          283 AVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILYLN  318 (321)
Q Consensus       283 ~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~~~  318 (321)
                      .++...|+| ........++++++++++|+++.++..
T Consensus        77 ~~t~l~~Gd~~ls~~lt~istll~~~~~P~~~~l~~~  113 (187)
T PF01758_consen   77 VFTYLAGGDVALSVSLTLISTLLAPFLMPLLLYLLSG  113 (187)
T ss_dssp             HHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHhCCCcccccceeeHHHHHHHHHHHHHHHHHhc
Confidence            999999999 888888889999999999999988764

They are related to the human bile acid:sodium symporters, which are transmembrane proteins functioning in the liver in the uptake of bile acids from portal blood plasma, a process mediated by the co-transport of Na+ []. In yeast, overexpression of the ACR3 gene confers an arsenite- but not an arsenate-resistance phenotype [].; GO: 0008508 bile acid:sodium symporter activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 3ZUX_A 3ZUY_A.

>COG0385 Predicted Na+-dependent transporter [General function prediction only]

Probab=97.96  E-value=8.1e-05  Score=70.61  Aligned_cols=109  Identities=18%  Similarity=0.142  Sum_probs=88.6

Q ss_pred             cchhHHHHHHhhhhhcCCCCCC-C-cCchHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHH
Q 020834          202 EAMIPCILLALGGNLVDGPGSA-K-LGFRTTAAIIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSV  279 (321)
Q Consensus       202 ~~~vPl~livlG~~L~~~~~~~-~-~~~~~i~~~~~~Rlil~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~  279 (321)
                      ...+-+.|+..|..|... +.. . .+++....+.+.-++++|++++++.+.      ++. ||.+..=+++..+.|.++
T Consensus        41 ~~~l~lImf~mGl~Ls~~-d~~~~~~~p~~vligl~~qfvlmPlla~~~~~~------~~l-~~~l~~Gl~ll~~~Pggv  112 (319)
T COG0385          41 PIALALIMFGMGLTLSRE-DFLAGLKHPRLVLIGLAAQFVLMPLLALLLAKL------FPL-PPELAVGLLLLGCCPGGV  112 (319)
T ss_pred             HHHHHHHHHhcCCCCCHH-HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH------cCC-CHHHHHhHHheeeCCCch
Confidence            445667788888888763 211 1 247899999999999999999999874      344 777777789999999999


Q ss_pred             HHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020834          280 LSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILYLN  318 (321)
Q Consensus       280 ~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~~~  318 (321)
                      ...+++..+++| ...-.....+++++++..|+++.+++.
T Consensus       113 ~S~~~t~lAkGnValsV~~tsvStll~~f~tPllv~l~~~  152 (319)
T COG0385         113 ASNAMTYLAKGNVALSVCSTSVSTLLGPFLTPLLVGLLAG  152 (319)
T ss_pred             hHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999 666666779999999999999998753

>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)

Probab=97.32  E-value=0.0014  Score=62.55  Aligned_cols=144  Identities=20%  Similarity=0.145  Sum_probs=98.9

Q ss_pred             ChhHHHHHHHHHHhhhhhhhhhhccCCCcchhHHHHHHHhccchhHHHHHHhhhhhcCCCCCCC-cCchHHHHHHHHHHh
Q 020834          161 QPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAK-LGFRTTAAIIFGRLV  239 (321)
Q Consensus       161 nP~iia~i~g~ii~~ip~l~~~f~~~~~~l~~i~~~l~~lG~~~vPl~livlG~~L~~~~~~~~-~~~~~i~~~~~~Rli  239 (321)
                      |+.+++.+++++++..-|-.      +.....+.  .+......+.+..++-|.+|....-.+. .++|....+...-++
T Consensus         1 ~~fl~~l~~ai~la~~~P~~------g~~~~~~~--~~~~~~~~v~~iFf~~Gl~L~~~~l~~~~~~~~~~l~~~~~~fv   72 (313)
T PF13593_consen    1 QWFLLGLLLAILLAYLFPAP------GAAGGVIK--PEYVIKYGVALIFFISGLSLPTEELKAALRNWRLHLFVQAFNFV   72 (313)
T ss_pred             CchHHHHHHHHHHHHHcCcc------cccCCccc--hhhhHHHHHHHHHHHHcCCCCHHHHHHHHhcchHHHHHHHHHHH
Confidence            34567777777777643211      11111221  0234444588888888988865211111 247788888999999


Q ss_pred             HHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHH-HHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020834          240 LVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLS-GAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILYL  317 (321)
Q Consensus       240 l~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~-~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~~  317 (321)
                      +.|++++.+......  +   .++.+..=+++..|+|+.+.. ..+++..|+| ..+--....+.++.++..|+|+.+++
T Consensus        73 l~Pll~~~~~~l~~~--~---~~~~l~~Gl~~~~~lPtTv~S~v~~T~~AgGN~a~Al~~~~~snllgv~ltP~ll~l~l  147 (313)
T PF13593_consen   73 LFPLLGFGLSRLFPA--F---LPPELALGLLILACLPTTVSSSVVLTRLAGGNVALALFNAVLSNLLGVFLTPLLLLLLL  147 (313)
T ss_pred             HHHHHHHHHHHHhhc--c---CCHHHHHHHHHHhhCCchhhHHHHHHHHcCCCHHHHHHHHHHHhhhhHhHHHHHHHHHh
Confidence            999999998775321  2   266688889999999998766 4688988888 44444466899999999999999887

>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]

Probab=95.21  E-value=0.47  Score=45.50  Aligned_cols=137  Identities=12%  Similarity=0.116  Sum_probs=102.7

Q ss_pred             hHHHHHHHHHHhhhhhhhhhhccCCCcchhHHHHHH--HhccchhHHHHHHhhhhhcCC---CCCCCc-----CchHHHH
Q 020834          163 PIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCI--ILGEAMIPCILLALGGNLVDG---PGSAKL-----GFRTTAA  232 (321)
Q Consensus       163 ~iia~i~g~ii~~ip~l~~~f~~~~~~l~~i~~~l~--~lG~~~vPl~livlG~~L~~~---~~~~~~-----~~~~i~~  232 (321)
                      ..+++++|+.++..-|             -+.+.+.  ..++.++|++..++= +++..   .+.++.     +.|....
T Consensus        20 v~l~i~~Gi~lG~~~p-------------~~~~~l~~~~~~~~sipiai~L~~-MmYP~m~ki~~~~~~~v~k~~k~L~l   85 (342)
T COG0798          20 VFLAIAIGILLGVHFP-------------GLAQLLGKLEFGGVSIPIAIGLIL-MMYPPMLKIDFEELKNVFKDPKPLIL   85 (342)
T ss_pred             HHHHHHHHHHHHhccc-------------chhhhcccceeCceehhHHHHHHH-HHhHHHhcCCHHHHHHHHhcchHHHH
Confidence            5788888888875421             2444455  678888888765543 33331   121111     3678888


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHH
Q 020834          233 IIFGRLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAG  311 (321)
Q Consensus       233 ~~~~Rlil~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi  311 (321)
                      ..+.-.++-|++++.+.++     +++. -|.++.-+++....|+-..+.+-++..++| +.++..+.+.-++.++..|.
T Consensus        86 sL~~Nwii~P~lm~~la~~-----fl~~-~pey~~GlILlglApC~aMVivw~~La~Gd~~~tlv~Va~n~l~qiv~y~~  159 (342)
T COG0798          86 SLFVNWIIGPLLMFALAWF-----FLPD-EPEYRAGLILLGLAPCIAMVIVWSGLAKGDRELTLVLVAFNSLLQIVLYAP  159 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHH-----HhCC-CHHHHHHHHHHHhhhhHHHHHHHHhhccCcHhhhhHHHHHHHHHHHHHHHH
Confidence            9999999999999999886     3343 677888888888999999999999999999 77777788999999999999


Q ss_pred             HHHHHHHh
Q 020834          312 WIILYLNL  319 (321)
Q Consensus       312 ~~~l~~~~  319 (321)
                      +..+|+..
T Consensus       160 ~~~~~l~v  167 (342)
T COG0798         160 LGKFFLGV  167 (342)
T ss_pred             HHHHHHhh
Confidence            98888764

>PF04172 LrgB: LrgB-like family ; InterPro: IPR007300 The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control murein hydrolase activity and penicillin tolerance []

Probab=80.66  E-value=28  Score=31.51  Aligned_cols=137  Identities=15%  Similarity=0.107  Sum_probs=71.5

Q ss_pred             hhhcChhHHHHHHHHHHhhhhhhhhhhccCCCcchhHHHHHHHhccchhHHHHHHhhhhhcCCCCCCCcCchHHHHHHHH
Q 020834          157 KQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAKLGFRTTAAIIFG  236 (321)
Q Consensus       157 k~l~nP~iia~i~g~ii~~ip~l~~~f~~~~~~l~~i~~~l~~lG~~~vPl~livlG~~L~~~~~~~~~~~~~i~~~~~~  236 (321)
                      +.++||.+++.++=+.+-.+-         +.|.+--.+.-+.+...--|. .+.+|.-|++..+.-+-+++.+...++.
T Consensus        17 ~~~l~P~l~a~~~ii~~L~~~---------~i~y~~Y~~gg~~l~~lLgPa-tVALAvPLY~~~~~l~~~~~~il~~~~~   86 (215)
T PF04172_consen   17 SPFLNPLLIAIVLIIAFLLLT---------GIPYEDYMQGGDILSFLLGPA-TVALAVPLYRQRRLLKKNWIPILVGVLV   86 (215)
T ss_pred             CCcccHHHHHHHHHHHHHHHH---------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456799999888765554331         355543334445554444444 5678888887422111124444444444


Q ss_pred             HHhHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHH
Q 020834          237 RLVLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAGW  312 (321)
Q Consensus       237 Rlil~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~  312 (321)
                      =-++--.....+.+   .+|.   ++.+..-.+-=-..+|-|+   -+++..|.+ ...+..++.|=++..+.=|.+
T Consensus        87 g~~~~~~~~~~l~~---~lgl---~~~~~~Sl~pkSVTtpiAi---~is~~iGG~~sLta~~VvitGi~Ga~~g~~l  154 (215)
T PF04172_consen   87 GSLVSIFSAVLLAR---LLGL---SPEIILSLAPKSVTTPIAI---EISEQIGGIPSLTAVFVVITGILGAVLGPPL  154 (215)
T ss_pred             HHHHHHHHHHHHHH---HHCc---CHHHHHHHHHHHhhHHHHH---HHHHHhCChHHHHHHHHHHHhhHHHHhHHHH
Confidence            33333333333332   2344   2444444333444566666   456778887 666666666655544444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	321
3zux_A	332	Transporter, ASBTNM; transport protein, membrane p	98.75

>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*

Probab=98.75  E-value=7.3e-08  Score=91.16  Aligned_cols=136  Identities=9%  Similarity=0.024  Sum_probs=105.7

Q ss_pred             ChhHHHHHHHHHHhhhhhhhhhhccCCCcchhHHHHHHHhccchhHHHHHHhhhhhcCCCCCCC--cCchHHHHHHHHHH
Q 020834          161 QPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTDSCIILGEAMIPCILLALGGNLVDGPGSAK--LGFRTTAAIIFGRL  238 (321)
Q Consensus       161 nP~iia~i~g~ii~~ip~l~~~f~~~~~~l~~i~~~l~~lG~~~vPl~livlG~~L~~~~~~~~--~~~~~i~~~~~~Rl  238 (321)
                      ++..+.++++++++..-|-         ...++    +..-..++.+.|+.+|.++... +.++  .++|......+.++
T Consensus        18 ~~~~l~i~~~~~lg~~~P~---------~~~~~----~~~i~~~l~~~mf~~G~~l~~~-~l~~~~~~~~~~~~~l~~~~   83 (332)
T 3zux_A           18 KTFSLWAALFAAAAFFAPD---------TFKWA----GPYIPWLLGIIMFGMGLTLKPS-DFDILFKHPKVVIIGVIAQF   83 (332)
T ss_dssp             HTHHHHHHHHHHHHHHCGG---------GTGGG----GGGHHHHHHHHHHHHHHHCCGG-GGHHHHHSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcch---------hhhhh----HHHHHHHHHHHHHHHHhCCCHH-HHHHHHhCcHHHHHHHHHHH
Confidence            5677778888887765321         11121    2223357889999999999763 2221  14566778899999


Q ss_pred             hHHHHHHHHHHHHHHhcCCccCCchHHHHHHHHhhcchHHHHHHHHHHhcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020834          239 VLVPPAGLGIVTLADKLGFIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCG-REAAAVLFWVHIFAVFSMAGWIILYL  317 (321)
Q Consensus       239 il~P~i~~~i~~~~~~~~~l~~~d~~~~~V~~l~~a~P~A~~~~~la~~~g~~-~~~s~~l~~s~l~s~vTlpi~~~l~~  317 (321)
                      +++|++++.+.+.      ++. ||.+...+++..++|++....++++++|.| +.+......+++++++++|+|+.++.
T Consensus        84 vi~Pll~~~l~~~------~~l-~~~~~~Glil~~~~P~~~~s~v~t~~a~Gd~~la~~~~~~stll~~~~~Pl~~~l~~  156 (332)
T 3zux_A           84 AIMPATAWCLSKL------LNL-PAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLA  156 (332)
T ss_dssp             HHHHHHHHHHHHH------TTC-CHHHHHHHHHHHHSCCCTHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH------hCC-ChHHHHHHHHHhcCCchhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999998764      243 888999999999999999999999999999 88888899999999999999998875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00