Citrus Sinensis ID: 020973

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MNVMGEESSERRKAMKGLLFLAKKKGNFLSSDLEGQEKDERRVRTGTQREDAGEIDNIVERVENIVERVQCTTIHKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSSSKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPTKAFKTS
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHccccccccccccHHHHHHHHHHccccEEEHHcccccccccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccc
Coil and Loop (DISEMBL)
MNVMGEESSERRKAMKGLLFLAKKKgnflssdlegqekderrvrtgtqredageIDNIVERVENIVERVQCTtihksesskrgedisreKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFnthynhssiptYLKDVAsflmprwtppheLAALYwigdwrpsAILDLArglvrspssissssksessDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHlpfaslnkkRLYGSALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGkvldtvptkafkts
Flexible Loop (DISEMBL)
mnvmgeesserRKAMKGLLFLAKKkgnflssdlegqekderrvrtgtqredageidnivERVENIVERvqcttihksesskrgedisrekyshwrqeqktravslekqlNSRWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRspssissssksessdaeRLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHqvseqqklgkvldtvptkafkts
Low Complexity Region (SEG)
MNVMGEESSERRKAMKGLLFLAKKKGNFLSSDLEGQEKDERRVRTGTQREDAGeidnivervenivervQCTTIHKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRspssissssksessDAERLLSQVMHeirieeaiideemaeiqaTCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQlrlkalelvvkkvlSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPTKAFKTS
Disordered region (IsUnstruct)
******************LFL*********************************IDNIVERVENIVERVQCTTI************************************SRWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLV**********************QVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVS********************
Disordered Region (DISOPRED)
****************************************************************************************EKYSHWRQEQKTRAVSLEK******ELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGL**********************************************************************KEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQ**********************
Disordered Region (DISEMBL)
************KAMKGLLFLAKKKGNFLSSDLE***************EDAGEIDNIVERVENIVERVQCTTI***************************AVSLEKQLNSRWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGL********************LLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPTKAFKTS
Disordered Region (DISPRO)
********************L****************************EDAGEIDNIVERVENIVERVQCTTIH********EDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVR*************SDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPTK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNVMGEESSERRKAMKGLLFLAKKKGNFLSSDLEGQEKDERRVRTGTQREDAGEIDNIVERVENIVERVQCTTIHKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSSSKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPTKAFKTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
255553229	333	conserved hypothetical protein [Ricinus	0.758	0.726	0.612	2e-79
224128460	241	predicted protein [Populus trichocarpa]	0.742	0.983	0.607	5e-72
359482705	298	PREDICTED: uncharacterized protein LOC10	0.821	0.879	0.522	4e-71
297743474	946	unnamed protein product [Vitis vinifera]	0.924	0.311	0.469	2e-68
297849958	317	F9L1.26 [Arabidopsis lyrata subsp. lyrat	0.755	0.760	0.544	9e-68
186478517	289	uncharacterized protein [Arabidopsis tha	0.733	0.809	0.539	2e-66
15218124	307	uncharacterized protein [Arabidopsis tha	0.874	0.908	0.471	3e-66
116830879	308	unknown [Arabidopsis thaliana]	0.733	0.759	0.539	3e-66
5103849	301	F9L1.26 [Arabidopsis thaliana]	0.874	0.926	0.471	3e-66
326518168	297	predicted protein [Hordeum vulgare subsp	0.589	0.632	0.301	3e-07

>gi|255553229|ref|XP_002517657.1| conserved hypothetical protein [Ricinus communis] gi|223543289|gb|EEF44821.1| conserved hypothetical protein [Ricinus communis]

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 191/245 (77%), Gaps = 3/245 (1%)

Query: 62  VENIVERVQCTTIHKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKE 121
           ++++ E+VQC T+H++E+S   E++S  KY  WRQEQKTRA  L+KQL +RWE E+L++ 
Sbjct: 79  LDSMDEKVQCMTLHRAETS---EELSSVKYGLWRQEQKTRAARLQKQLRARWEFEKLLQA 135

Query: 122 QLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSP 181
           Q+NRFN+HYN + +P  LKDVA FLMP+W PPHEL AL W+G+WRPSAIL L RGL  S 
Sbjct: 136 QVNRFNSHYNCAMVPNRLKDVAEFLMPKWAPPHELTALTWLGEWRPSAILHLLRGLANSS 195

Query: 182 SSISSSSKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGS 241
           S+  +SS   S+  +RLLSQV+++IRIEEAIID EMAEIQATCVLHLPFA LN  + + +
Sbjct: 196 STSWASSLRGSTGTDRLLSQVINDIRIEEAIIDAEMAEIQATCVLHLPFAPLNSHQSHNA 255

Query: 242 ALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQ 301
           AL  IQ EFKKIERVI KAQQLR K L+L VKKVL+ +DAA+F VAF  IQ+ IHQ +E+
Sbjct: 256 ALSCIQAEFKKIERVITKAQQLRFKTLDLAVKKVLNQSDAAEFLVAFVGIQDLIHQFAEK 315

Query: 302 QKLGK 306
           Q+L K
Sbjct: 316 QELPK 320

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128460|ref|XP_002329009.1| predicted protein [Populus trichocarpa] gi|222839680|gb|EEE78003.1| predicted protein [Populus trichocarpa]

 Score =  277 bits (708), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 144/237 (60%), Positives = 173/237 (72%)

Query: 83  GEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSSIPTYLKDV 142
           GE++SR KY  WRQEQ TRA  LEKQL + W++EELI+EQLNRF ++Y+ +  P  LKDV
Sbjct: 5   GEEVSRGKYGLWRQEQNTRAARLEKQLKTSWKIEELIEEQLNRFPSNYHSAVFPARLKDV 64

Query: 143 ASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSSSKSESSDAERLLSQV 202
              LMP+W  PHEL  L W+GDWRPS ILDL   LV+S S   SSS S S+  ERLL+Q+
Sbjct: 65  PRLLMPKWLLPHELTTLAWLGDWRPSCILDLVHALVQSSSFSLSSSSSNSNGVERLLAQL 124

Query: 203 MHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQ 262
            HEIRIEEAII+EEMAEIQATC++HLPFA +   R   +AL  IQ EFKKIERVI KAQQ
Sbjct: 125 THEIRIEEAIINEEMAEIQATCIIHLPFAPVRNHRSGATALSCIQAEFKKIERVITKAQQ 184

Query: 263 LRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPTKAFKTS 319
           LR KALEL VKKVL  +DAA+F VAF  IQ+ IHQ++ +QKL K    +P  AF  +
Sbjct: 185 LRFKALELAVKKVLRQSDAAEFLVAFAGIQDVIHQLAAKQKLPKGPAILPALAFGPA 241

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482705|ref|XP_002265218.2| PREDICTED: uncharacterized protein LOC100247324 [Vitis vinifera]

 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 140/268 (52%), Positives = 186/268 (69%), Gaps = 6/268 (2%)

Query: 52  AGEIDNIVERVENIVERVQCTTIHKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNS 111
           AGE +  V   ++I+E VQ   + K E++K+G+D+S EK+  W QEQK+R   L+K L S
Sbjct: 35  AGE-ETEVGEFDDIIESVQYKNLRKGETTKQGDDLSLEKHGLWLQEQKSRVARLQKHLKS 93

Query: 112 RWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAIL 171
           RW LE+LI++ L+ ++ H+N + +   L+DVA  LMP+W PPHELA+L W+GDWRPSAIL
Sbjct: 94  RWTLEDLIQQHLHMYHAHFNRALVSARLQDVAQLLMPQWAPPHELASLAWLGDWRPSAIL 153

Query: 172 DLARGLVRSPSSISSSSKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFA 231
            L     R+  S+S S  +     +RLL Q++HE+RIEE +++EEMAEIQATCVLHLPFA
Sbjct: 154 GLIWARARTSPSLSGSDPA----IQRLLPQLIHELRIEETVVEEEMAEIQATCVLHLPFA 209

Query: 232 SLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERI 291
            +N  R  G+AL  IQ EFKKI +VI+KAQ LR KALE+VV  VLS TDAA+F VAF  I
Sbjct: 210 PMN-HRTGGAALRCIQSEFKKIHQVIVKAQSLRFKALEMVVNNVLSQTDAAEFLVAFAGI 268

Query: 292 QNAIHQVSEQQKLGKVLDTVPTKAFKTS 319
           Q +IHQ +  Q+L K   +V  KA   S
Sbjct: 269 QKSIHQFAAHQRLRKGQLSVCVKAVGNS 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743474|emb|CBI36341.3| unnamed protein product [Vitis vinifera]

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 200/311 (64%), Gaps = 16/311 (5%)

Query: 19  LFLAKKKGNFLSSDLEGQEKDERRVRTGTQRED--AGEIDNIVERVENIVERVQCTTIHK 76
           +F   K G F+  +++   +D+        +E   AGE +  V   ++I+E VQ   + K
Sbjct: 640 VFTTLKLGVFVGGNVKYIHEDDGNEEEEESKEKSVAGE-ETEVGEFDDIIESVQYKNLRK 698

Query: 77  SESSKR--------GEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNT 128
            E++K+        G+D+S EK+  W QEQK+R   L+K L SRW LE+LI++ L+ ++ 
Sbjct: 699 GETTKQAENLYVLSGDDLSLEKHGLWLQEQKSRVARLQKHLKSRWTLEDLIQQHLHMYHA 758

Query: 129 HYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSSS 188
           H+N + +   L+DVA  LMP+W PPHELA+L W+GDWRPSAIL L     R+  S+S S 
Sbjct: 759 HFNRALVSARLQDVAQLLMPQWAPPHELASLAWLGDWRPSAILGLIWARARTSPSLSGSD 818

Query: 189 KSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQK 248
            +     +RLL Q++HE+RIEE +++EEMAEIQATCVLHLPFA +N  R  G+AL  IQ 
Sbjct: 819 PA----IQRLLPQLIHELRIEETVVEEEMAEIQATCVLHLPFAPMN-HRTGGAALRCIQS 873

Query: 249 EFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVL 308
           EFKKI +VI+KAQ LR KALE+VV  VLS TDAA+F VAF  IQ +IHQ +  Q+L K  
Sbjct: 874 EFKKIHQVIVKAQSLRFKALEMVVNNVLSQTDAAEFLVAFAGIQKSIHQFAAHQRLRKGQ 933

Query: 309 DTVPTKAFKTS 319
            +V  KA   S
Sbjct: 934 LSVCVKAVGNS 944

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849958|ref|XP_002892860.1| F9L1.26 [Arabidopsis lyrata subsp. lyrata] gi|297338702|gb|EFH69119.1| F9L1.26 [Arabidopsis lyrata subsp. lyrata]

 Score =  263 bits (672), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 134/246 (54%), Positives = 174/246 (70%), Gaps = 5/246 (2%)

Query: 68  RVQCTTIHKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFN 127
           R Q    H+ +S ++G++IS + Y  WRQEQ + A  L+K+L SRWEL+ELI+EQL+R+ 
Sbjct: 68  RSQAGRSHQQDSFRKGDEISGDLYELWRQEQNSIAARLDKELKSRWELDELIEEQLSRYQ 127

Query: 128 THYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSS 187
           +HY  S + T LKDV++ ++P W PPHELAA+ W+GDWRP++ILDL R L     S S S
Sbjct: 128 SHYYKSMVSTSLKDVSNLVLPTWLPPHELAAVAWLGDWRPTSILDLVRILAAQNPSFSLS 187

Query: 188 SKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQ 247
             S     ER+LSQ++ EIRIEEA+IDEE AEIQATCVLHLPF+ L   R +  AL  +Q
Sbjct: 188 ESS-----ERVLSQLLREIRIEEAVIDEEYAEIQATCVLHLPFSPLCNTRSHEEALRSVQ 242

Query: 248 KEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKV 307
           + F  I RVI KAQ+LR K LELV+KK+L+ TD A+F VAF  IQ+AIHQ  EQ+KL K 
Sbjct: 243 ELFGNIHRVISKAQRLRYKVLELVMKKLLNQTDTAEFVVAFAGIQDAIHQFGEQKKLRKY 302

Query: 308 LDTVPT 313
              VP+
Sbjct: 303 YPAVPS 308

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186478517|ref|NP_001117294.1| uncharacterized protein [Arabidopsis thaliana] gi|332191182|gb|AEE29303.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  258 bits (659), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 129/239 (53%), Positives = 174/239 (72%), Gaps = 5/239 (2%)

Query: 75  HKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSS 134
           H+ ES  +G+++S + Y  WRQEQ + A  L+K+L SRWEL+ELI+EQL+R+ +HY++S 
Sbjct: 47  HQHESFTKGDELSGDLYELWRQEQNSIAARLDKELKSRWELDELIEEQLSRYQSHYDNSM 106

Query: 135 IPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSSSKSESSD 194
           + T+LKDV++ ++P W PPHELAA+ W+GDWRP++ILDL R L     S S S  S    
Sbjct: 107 VSTFLKDVSNLVLPTWIPPHELAAVAWLGDWRPTSILDLVRILAAQNPSFSLSESS---- 162

Query: 195 AERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIE 254
             R+LSQ++ EIRIEEA+IDEE AEIQAT VL+LPF+ L   RL+  AL  +Q+ F  I 
Sbjct: 163 -LRVLSQLLREIRIEEAVIDEEYAEIQATGVLYLPFSPLCNTRLHEEALRSVQELFGNIH 221

Query: 255 RVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPT 313
           +VI KAQ+LR K LELV+KK+L+ TD A+F VAF  IQ+AIHQ  EQ+KL K+   VP+
Sbjct: 222 KVISKAQRLRYKVLELVMKKLLNQTDTAEFVVAFAGIQDAIHQFGEQKKLRKIYPAVPS 280

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218124|ref|NP_172984.1| uncharacterized protein [Arabidopsis thaliana] gi|91805787|gb|ABE65622.1| hypothetical protein At1g15320 [Arabidopsis thaliana] gi|332191181|gb|AEE29302.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  258 bits (658), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/297 (47%), Positives = 192/297 (64%), Gaps = 18/297 (6%)

Query: 17  GLLFLAKKKGNFLSSDLEGQEKDERRVRTGTQREDAGEIDNIVERVENIVERVQCTTIHK 76
           G +FL + + N       G+E          +RE A  I +         +R      H+
Sbjct: 20  GFVFLQRSEENGFEEPNNGEELS----WDDLEREAASNISS---------KRSHAERSHQ 66

Query: 77  SESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSSIP 136
            ES  +G+++S + Y  WRQEQ + A  L+K+L SRWEL+ELI+EQL+R+ +HY++S + 
Sbjct: 67  HESFTKGDELSGDLYELWRQEQNSIAARLDKELKSRWELDELIEEQLSRYQSHYDNSMVS 126

Query: 137 TYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSSSKSESSDAE 196
           T+LKDV++ ++P W PPHELAA+ W+GDWRP++ILDL R L     S S S  S      
Sbjct: 127 TFLKDVSNLVLPTWIPPHELAAVAWLGDWRPTSILDLVRILAAQNPSFSLSESS-----L 181

Query: 197 RLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERV 256
           R+LSQ++ EIRIEEA+IDEE AEIQAT VL+LPF+ L   RL+  AL  +Q+ F  I +V
Sbjct: 182 RVLSQLLREIRIEEAVIDEEYAEIQATGVLYLPFSPLCNTRLHEEALRSVQELFGNIHKV 241

Query: 257 IIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPT 313
           I KAQ+LR K LELV+KK+L+ TD A+F VAF  IQ+AIHQ  EQ+KL K+   VP+
Sbjct: 242 ISKAQRLRYKVLELVMKKLLNQTDTAEFVVAFAGIQDAIHQFGEQKKLRKIYPAVPS 298

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830879|gb|ABK28396.1| unknown [Arabidopsis thaliana]

 Score =  258 bits (658), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 129/239 (53%), Positives = 174/239 (72%), Gaps = 5/239 (2%)

Query: 75  HKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSS 134
           H+ ES  +G+++S + Y  WRQEQ + A  L+K+L SRWEL+ELI+EQL+R+ +HY++S 
Sbjct: 65  HQHESFTKGDELSGDLYELWRQEQNSIAARLDKELKSRWELDELIEEQLSRYQSHYDNSM 124

Query: 135 IPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSSSKSESSD 194
           + T+LKDV++ ++P W PPHELAA+ W+GDWRP++ILDL R L     S S S  S    
Sbjct: 125 VSTFLKDVSNLVLPTWIPPHELAAVAWLGDWRPTSILDLVRILAAQNPSFSLSESS---- 180

Query: 195 AERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIE 254
             R+LSQ++ EIRIEEA+IDEE AEIQAT VL+LPF+ L   RL+  AL  +Q+ F  I 
Sbjct: 181 -LRVLSQLLREIRIEEAVIDEEYAEIQATGVLYLPFSPLCNTRLHEEALRSVQELFGNIH 239

Query: 255 RVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPT 313
           +VI KAQ+LR K LELV+KK+L+ TD A+F VAF  IQ+AIHQ  EQ+KL K+   VP+
Sbjct: 240 KVISKAQRLRYKVLELVMKKLLNQTDTAEFVVAFAGIQDAIHQFGEQKKLRKIYPAVPS 298

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5103849|gb|AAD39679.1|AC007591_44 F9L1.26 [Arabidopsis thaliana]

 Score =  258 bits (658), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/297 (47%), Positives = 192/297 (64%), Gaps = 18/297 (6%)

Query: 17  GLLFLAKKKGNFLSSDLEGQEKDERRVRTGTQREDAGEIDNIVERVENIVERVQCTTIHK 76
           G +FL + + N       G+E          +RE A  I +         +R      H+
Sbjct: 14  GFVFLQRSEENGFEEPNNGEELS----WDDLEREAASNISS---------KRSHAERSHQ 60

Query: 77  SESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSSIP 136
            ES  +G+++S + Y  WRQEQ + A  L+K+L SRWEL+ELI+EQL+R+ +HY++S + 
Sbjct: 61  HESFTKGDELSGDLYELWRQEQNSIAARLDKELKSRWELDELIEEQLSRYQSHYDNSMVS 120

Query: 137 TYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRSPSSISSSSKSESSDAE 196
           T+LKDV++ ++P W PPHELAA+ W+GDWRP++ILDL R L     S S S  S      
Sbjct: 121 TFLKDVSNLVLPTWIPPHELAAVAWLGDWRPTSILDLVRILAAQNPSFSLSESS-----L 175

Query: 197 RLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERV 256
           R+LSQ++ EIRIEEA+IDEE AEIQAT VL+LPF+ L   RL+  AL  +Q+ F  I +V
Sbjct: 176 RVLSQLLREIRIEEAVIDEEYAEIQATGVLYLPFSPLCNTRLHEEALRSVQELFGNIHKV 235

Query: 257 IIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPT 313
           I KAQ+LR K LELV+KK+L+ TD A+F VAF  IQ+AIHQ  EQ+KL K+   VP+
Sbjct: 236 ISKAQRLRYKVLELVMKKLLNQTDTAEFVVAFAGIQDAIHQFGEQKKLRKIYPAVPS 292

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326518168|dbj|BAK07336.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 21/209 (10%)

Query: 119 IKEQLNRFNTHYNH--SSIPTYLKDVASFLMPRWTPPHELAALYWI-GDWRPSAILDLAR 175
           I   L R    Y+   +  P   +DV + +     PP  +AAL W+ GD RPS IL L  
Sbjct: 84  ITADLARLRLRYSRLAAGPPVRPRDVPALVARTDDPPLAVAALSWLGGDLRPSCILALLP 143

Query: 176 GLVRSPSSISSSSKSESSDAER---LLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFAS 232
            L+ S  +  S         ER    LS     ++  EA +D E+AE Q+T  + L    
Sbjct: 144 ALLPSLRTSESEGDLFLPSNERQSQALSAARRRLQAREAALDGEVAEYQSTYAMKLACEK 203

Query: 233 LNKKRLYGSALGFIQ---KEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFE 289
             +        GF +   +E  K+ R   +A +LR +A+E  VK+VL+P  A +F  A E
Sbjct: 204 TKE--------GFAETAAEEVCKMARAARRADKLRWRAVEAAVKEVLTPAQAKEFLKAVE 255

Query: 290 RIQNAI--HQVSEQQKLGKVLDTVPTKAF 316
            +   +  H    Q + G +  +VP +AF
Sbjct: 256 DVSGKVGRHGARWQARAGPL--SVPAEAF 282

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
TAIR|locus:2037813	307	AT1G15320 "AT1G15320" [Arabido	0.733	0.762	0.414	2.1e-45
TAIR|locus:2124157	282	AT4G18690 "AT4G18690" [Arabido	0.291	0.329	0.29	0.0005

TAIR|locus:2037813 AT1G15320 "AT1G15320" [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 99/239 (41%), Positives = 141/239 (58%)

Query:    75 HKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSS 134
             H+ ES  +G+++S + Y  WRQEQ + A  L+K+L SRWEL+ELI+EQL+R+ +HY++S 
Sbjct:    65 HQHESFTKGDELSGDLYELWRQEQNSIAARLDKELKSRWELDELIEEQLSRYQSHYDNSM 124

Query:   135 IPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRXXXXXXXXXXXXXXD 194
             + T+LKDV++ ++P W PPHELAA+ W+GDWRP++ILDL R L                 
Sbjct:   125 VSTFLKDVSNLVLPTWIPPHELAAVAWLGDWRPTSILDLVRILAAQNPSFSLSESSL--- 181

Query:   195 AERLLSQVMHXXXXXXXXXXXXXXXXXXTCVLHLPFASLNKKRLYGSALGFIQKEFKKIE 254
               R+LSQ++                   T VL+LPF+ L   RL+  AL  +Q+ F  I 
Sbjct:   182 --RVLSQLLREIRIEEAVIDEEYAEIQATGVLYLPFSPLCNTRLHEEALRSVQELFGNIH 239

Query:   255 RVIIKAQQXXXXXXXXXXXXXXSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPT 313
             +VI KAQ+              + TD A+F VAF  IQ+AIHQ  EQ+KL K+   VP+
Sbjct:   240 KVISKAQRLRYKVLELVMKKLLNQTDTAEFVVAFAGIQDAIHQFGEQKKLRKIYPAVPS 298

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2124157 AT4G18690 "AT4G18690" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
 Identities = 29/100 (29%), Positives = 43/100 (43%)

Query:    77 SESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSR-----WELEELIKEQLNRFNTHYN 131
             S SS   E + +  Y  W   Q    V L++ L S       +LEEL+ + +N F   Y 
Sbjct:     4 SSSSYGIEQLQKGCYYEWMSVQAKHIVDLKEALMSHRSKEDHKLEELVGKIVNDFQK-YT 62

Query:   132 HSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAIL 171
                     +  +S+  P W  P E   L W+G  RPS+ +
Sbjct:    63 EKRSELSRRSCSSYFAPSWNSPLE-NGLLWMGGCRPSSFI 101

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00970006 hypothetical protein (241 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	319
pfam14144	79	pfam14144, DOG1, Seed dormancy control	5e-12

>gnl|CDD|206313 pfam14144, DOG1, Seed dormancy control

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 100 TRAVSLEKQLNSR---WELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHEL 156
                L   LN+     EL  L+ + L  ++ ++   S      DV   L   W  P E 
Sbjct: 1   RLLAELRAALNAHASDDELRSLVDKVLAHYDEYFRLKSAAAK-ADVFHLLSGMWKTPAE- 58

Query: 157 AALYWIGDWRPSAILDLARGL 177
               WIG +RPS +L L   L
Sbjct: 59  RCFLWIGGFRPSELLKLLYSL 79

This family of plant proteins appears to be a highly specific controller seed dormancy. Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
PF14144	80	DOG1: Seed dormancy control	99.97
PF13801	125	Metal_resist: Heavy-metal resistance; PDB: 3EPV_C	96.43
PRK12750	170	cpxP periplasmic repressor CpxP; Reviewed	95.91
COG3678	160	CpxP P pilus assembly/Cpx signaling pathway, perip	95.87
PRK10455	161	periplasmic protein; Reviewed	95.14
PRK10363	166	cpxP periplasmic repressor CpxP; Reviewed	94.69
PRK12751	162	cpxP periplasmic stress adaptor protein CpxP; Revi	93.91
PF07813	100	LTXXQ: LTXXQ motif family protein; InterPro: IPR01	91.41

>PF14144 DOG1: Seed dormancy control

Probab=99.97  E-value=3e-31  Score=209.77  Aligned_cols=75  Identities=29%  Similarity=0.594  Sum_probs=70.0

Q ss_pred             hhHHHHHHhccc----chHHHHHHHHHHHHHHHHHhccCccccccccccccCCCCCChhhhhhhhhhcCCchhHHHHHHh
Q 020973          100 TRAVSLEKQLNS----RWELEELIKEQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLAR  175 (319)
Q Consensus       100 r~l~eLr~Al~s----d~eL~~LV~~~l~Hy~e~y~~~Ks~aA~~DVf~llsp~W~tplEra~FLWiGGfRPS~llkLL~  175 (319)
                      |++.|||+|+++    |.+|+.||+++|+||.+|| ++|+.+|++|||++|+|+|+||+|| ||+||||||||++|+|||
T Consensus         1 ~~l~eLr~al~~~~~~~~~L~~lV~~~~~Hy~~y~-~~K~~aa~~DV~~~~s~~W~sp~Er-~flWiGG~RPS~~~~ll~   78 (80)
T PF14144_consen    1 RQLNELRAALQSHADSDDELRSLVDKVMSHYDEYY-RAKSAAAKADVFHLLSPPWKSPLER-CFLWIGGWRPSELFKLLY   78 (80)
T ss_pred             CcHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcchHHHhCCCCCCHHHH-HHHHHhcCCHHHHHHHHh
Confidence            578999999943    7899999999999999755 5799999999999999999999999 999999999999999999


Q ss_pred             h
Q 020973          176 G  176 (319)
Q Consensus       176 s  176 (319)
                      +
T Consensus        79 s   79 (80)
T PF14144_consen   79 S   79 (80)
T ss_pred             c
Confidence            7

>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H

Probab=96.43  E-value=0.045  Score=43.50  Aligned_cols=86  Identities=21%  Similarity=0.200  Sum_probs=68.0

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKA  267 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEdaLsq~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~~T  267 (319)
                      .++||++|...|..+.......-..+-+.+......+. ....++..    -   ...+...++.+...-.+.+..|.++
T Consensus        39 ~l~Lt~eQ~~~l~~~~~~~~~~~~~~r~~~~~~r~~l~-~ll~~~~~----D---~~~i~a~~~~~~~~~~~l~~~~~~~  110 (125)
T PF13801_consen   39 MLNLTPEQQAKLRALMDEFRQEMRALRQELRAARQELR-ALLAAPPP----D---EAAIEALLEEIREAQAELRQERLEH  110 (125)
T ss_dssp             HS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCSSS--------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCC----C---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35699999999999999999999999999998888887 44322211    1   2247777788888888899999999


Q ss_pred             HHHHHHhhCCHHHHH
Q 020973          268 LELVVKKVLSPTDAA  282 (319)
Q Consensus       268 L~~lv~~ILTp~QAA  282 (319)
                      +.++. .+|||.|=+
T Consensus       111 ~~~~~-~~LtpeQR~  124 (125)
T PF13801_consen  111 LLEIR-AVLTPEQRA  124 (125)
T ss_dssp             HHHHH-HTT-GGGHH
T ss_pred             HHHHH-HcCCHHHhC
Confidence            99999 999999855

>PRK12750 cpxP periplasmic repressor CpxP; Reviewed

Probab=95.91  E-value=0.51  Score=42.46  Aligned_cols=99  Identities=15%  Similarity=0.151  Sum_probs=57.2

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHhcccccc-cccccchhhhhhHHHHHHHHHHHHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEAI--------IDEEMAEIQATCVLHLPF-ASLNKKRLYGSALGFIQKEFKKIERVII  258 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEda--------Lsq~ma~lQqslA~d~~~-~~~~~~~~g~~A~~~a~~kl~~Le~~l~  258 (319)
                      .|+||++|...|..++...+.+=.+        ....|....+.+. .+.. .++.     ..+   +.+..+.+...-.
T Consensus        50 ~L~LTdeQk~qik~i~~~~r~~~k~~~~~~r~~~~~~m~a~~~~~~-~Ll~a~~FD-----eaa---vral~~~~~~~~~  120 (170)
T PRK12750         50 QLDLTDAQKEQLKEMREANRAEMKAKYSGNREQSHAEMKAHHAKVQ-ALVLADDFD-----EAA---ANDLAKQMVEKQV  120 (170)
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHH-HHHhcCCCC-----HHH---HHHHHHHHHHHHH
Confidence            6889999999999998777664333        3344444444433 2221 2221     111   2222222222222


Q ss_pred             HHhHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Q 020973          259 KAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIH  296 (319)
Q Consensus       259 qAD~LR~~TL~~lv~~ILTp~QAA~fLlA~~e~~~rLR  296 (319)
                      +.---|.++.++++ .||||-|=+.|---..+.....+
T Consensus       121 e~~v~~~~~~~~~~-~vLTpEQRak~~e~~~~r~~~~~  157 (170)
T PRK12750        121 ERRVKMLEKRHQML-SILTPEQKAKFQELQQERMQECQ  157 (170)
T ss_pred             HHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHH
Confidence            22234677999999 99999999999877555544333

>COG3678 CpxP P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism]

Probab=95.87  E-value=0.12  Score=46.35  Aligned_cols=88  Identities=17%  Similarity=0.142  Sum_probs=60.2

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKA  267 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEdaLsq~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~~T  267 (319)
                      .+.||++|...|..+...-+   .+..+-+..-...+- .++.++..    .   ...+....+.++..-.+.+.+|.++
T Consensus        55 ~l~lT~~Qrqqi~~i~~~~~---~a~~~~~~~~r~~l~-~li~a~~~----D---~aka~a~~~~m~~~~~~~~~~r~k~  123 (160)
T COG3678          55 GLDLTRAQRQQIRDLMQAQR---RAQREQLRSKRRALH-ELIAADQF----D---EAKARAQAEKMENQRQALRELRVKS  123 (160)
T ss_pred             cccccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH-HHHhcCCc----C---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56799999999999877666   333333333333333 22211111    1   2257777888999999999999999


Q ss_pred             HHHHHHhhCCHHHHHHHHHH
Q 020973          268 LELVVKKVLSPTDAAKFFVA  287 (319)
Q Consensus       268 L~~lv~~ILTp~QAA~fLlA  287 (319)
                      -.++. .||||.|.+.|=--
T Consensus       124 ~~~m~-~vLTPEQr~~l~~~  142 (160)
T COG3678         124 DNQMY-QVLTPEQRAKLQEL  142 (160)
T ss_pred             HHHHH-HhcCHHHHHHHHHH
Confidence            99999 99999999765433

>PRK10455 periplasmic protein; Reviewed

Probab=95.14  E-value=0.43  Score=42.64  Aligned_cols=94  Identities=11%  Similarity=0.150  Sum_probs=59.3

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEAII-DEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLK  266 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEdaL-sq~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~~  266 (319)
                      .|.||++|...|..|.+..+..-... -++...++.-++.    +++.     .   +.+...++.+...-.+.-..|.+
T Consensus        54 ~L~LT~~Qrqqir~im~~~r~~~~~~~~~~r~~l~~li~a----d~FD-----e---aavra~~~k~~~~~~~~~~~~~~  121 (161)
T PRK10455         54 GLNLTDAQKQQIRDIMKAQRDQMKRPPLEERRAMHDIIAS----DTFD-----K---AKAEAQITKMEAQRKARMLAHME  121 (161)
T ss_pred             hCCCCHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHcc----CccC-----H---HHHHHHHHHHHHHHHHHHHHHHH
Confidence            68899999999999987766653333 2344444444331    1111     1   12444445555555555557889


Q ss_pred             HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q 020973          267 ALELVVKKVLSPTDAAKFFVAFERIQNAIHQ  297 (319)
Q Consensus       267 TL~~lv~~ILTp~QAA~fLlA~~e~~~rLR~  297 (319)
                      +-.+|. .||||-|=+.|=-   .+..|+..
T Consensus       122 ~~~qiy-~vLTPEQr~q~~~---~~ekr~~~  148 (161)
T PRK10455        122 TQNKIY-NVLTPEQKKQFNA---NFEKRLTE  148 (161)
T ss_pred             HHHHHH-HhCCHHHHHHHHH---HHHHHHHh
Confidence            999999 9999999998753   34444444

>PRK10363 cpxP periplasmic repressor CpxP; Reviewed

Probab=94.69  E-value=0.98  Score=40.89  Aligned_cols=101  Identities=13%  Similarity=0.195  Sum_probs=62.6

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEAIID-EEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLK  266 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEdaLs-q~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~~  266 (319)
                      .|.||++|...|-.|.+.-+.+.+.++ .+++.++.-+.    .+++     -..   .|.+.++.+...=.+.-=-|.+
T Consensus        48 gLdLTdaQRqQmRdLm~~~r~~~~~~~~~er~amh~LI~----ad~F-----DEa---avra~a~kma~~~~e~~Vem~k  115 (166)
T PRK10363         48 GISLTEHQRQQMRDLMQQARHEQPPVNVSEMETMHRLVT----AENF-----DEN---AVRAQAEKMAQEQVARQVEMAK  115 (166)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHh----cCCC-----CHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999988887655543 24445543322    1111     122   2344444443333333335678


Q ss_pred             HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhh
Q 020973          267 ALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSEQ  301 (319)
Q Consensus       267 TL~~lv~~ILTp~QAA~fLlA~~e~~~rLR~lgs~  301 (319)
                      +-++|. .||||-|-+.|=--.-+....+|.++..
T Consensus       116 ~~nqmy-~lLTPEQKaq~~~~~~~rm~~~~~~~~~  149 (166)
T PRK10363        116 VRNQMY-RLLTPEQQAVLNEKHQQRMEQLRDVTQW  149 (166)
T ss_pred             HHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            899999 9999999999955444444555555433

>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed

Probab=93.91  E-value=1.5  Score=39.45  Aligned_cols=99  Identities=8%  Similarity=0.107  Sum_probs=64.3

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEA-IIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLK  266 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEd-aLsq~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~~  266 (319)
                      .+.||++|...|-.+....+.... ..-..++.++.-+. .-+   +.     ..   .+.+.++.+...-..---.+.+
T Consensus        54 ~l~LTd~QR~qmr~im~~~r~~~~~~~~~~~~~m~~Li~-Ad~---FD-----ea---Avra~~~kma~~~~e~~v~~~~  121 (162)
T PRK12751         54 GINLTEQQRQQMRDLMRQSHQSQPRLDLEDREAMHKLIT-ADK---FD-----EA---AVRAQAEKMSQNQIERHVEMAK  121 (162)
T ss_pred             cCCCCHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHh-cCC---CC-----HH---HHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999877776531 12235555555555 222   21     22   2334444444444444446788


Q ss_pred             HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Q 020973          267 ALELVVKKVLSPTDAAKFFVAFERIQNAIHQVS  299 (319)
Q Consensus       267 TL~~lv~~ILTp~QAA~fLlA~~e~~~rLR~lg  299 (319)
                      +.++++ .+|||-|-+.|=--.-+-...+|...
T Consensus       122 ~~~qmy-~lLTPEQra~l~~~~e~r~~~~~~~~  153 (162)
T PRK12751        122 VRNQMY-NLLTPEQKEALNKKHQERIEKLQQKP  153 (162)
T ss_pred             HHHHHH-HcCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999 99999999999777666666666543

>PF07813 LTXXQ: LTXXQ motif family protein; InterPro: IPR012899 This five residue motif is found in a number of bacterial proteins bearing similarity to the protein CpxP (P32158 from SWISSPROT)

Probab=91.41  E-value=1.5  Score=34.19  Aligned_cols=80  Identities=11%  Similarity=0.182  Sum_probs=46.1

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcccccccccccchhhhhhHHHHHH--HHHHHHHHHHHHhH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEAII---DEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQK--EFKKIERVIIKAQQ  262 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEdaL---sq~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~--kl~~Le~~l~qAD~  262 (319)
                      .|.||++|...+..|....+..-..+   .+.+.++..  . +..             ...+..  .++.+...-.+.-.
T Consensus        12 ~L~LT~eQ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~   75 (100)
T PF07813_consen   12 ELNLTDEQKAKWRAIRQAMKAKMKPLKAMREQLRALRD--P-SFD-------------EAAPEALAAMAEMMELRAEMME   75 (100)
T ss_dssp             TS--THHHHHHHHHHHHHHCTTS------HHHHHHHHH--S-S---------------HHHHHHHH--HHCHHHHHHHHH
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHhhcccHHHHHHhcc--c-cCC-------------hhHHHHHHHHHHHHHHHHHHHH
Confidence            67799999999999998887776666   222222222  0 000             001111  11344455555566


Q ss_pred             HHHHHHHHHHHhhCCHHHHHHH
Q 020973          263 LRLKALELVVKKVLSPTDAAKF  284 (319)
Q Consensus       263 LR~~TL~~lv~~ILTp~QAA~f  284 (319)
                      .|..+...+. .||||.|=+.|
T Consensus        76 ~~~~~~~~~~-~vLt~eQk~~~   96 (100)
T PF07813_consen   76 ERAKAQHALY-AVLTPEQKEKF   96 (100)
T ss_dssp             HHHHHHHHHH-TTS-HHHHHHH
T ss_pred             HHHHHHHHHH-hcCCHHHHHHH
Confidence            7888999999 99999998765

This is a periplasmic protein that aids in combating extracytoplasmic protein-mediated toxicity, and may also be involved in the response to alkaline pH []. Another member of this family, Spy (P77754 from SWISSPROT) is also a periplasmic protein that may be involved in the response to stress []. The homology between CpxP and Spy may indicate that these two proteins are functionally related []. The motif is found repeated twice in many members of this entry. ; GO: 0042597 periplasmic space; PDB: 3ITF_B 3QZC_B 3OEO_D 3O39_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 49/371 (13%), Positives = 109/371 (29%), Gaps = 80/371 (21%)

Query: 4   MGEESSERRKAMKGLL--FLAKKKGNFLSSDLEGQEKDERRVRTGTQREDAGEIDNIVER 61
           M  E+ E +   K +L  F      NF   D +  +   + + +  + +      + V  
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNF---DCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63

Query: 62  V-----------ENIVERVQCTTIHKS--------ESSKRGEDISREKYSHWRQEQKTRA 102
                       E +V++     +  +        ++ +R   +    Y   R       
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123

Query: 103 VSLEKQLNSRWELEELIKEQLNRFNTHYN---H-------SSIPTYLKDVASFLMPRWTP 152
               K   SR +    +++ L       N           + +     DV      +   
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV---ALDVCLSYKVQCKM 180

Query: 153 PHELAALYWIG---DWRPSAILDLARGLVR-------SPSSISSSSKSESSDAERLLSQV 202
             +   ++W+       P  +L++ + L+        S S  SS+ K      +  L ++
Sbjct: 181 DFK---IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 203 MHEIRIEEA--IIDE--EMAEIQA---TC-VL----------HLPFASLNKKRLYGSALG 244
           +     E    ++          A   +C +L           L  A+     L   ++ 
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 245 FIQKEFKKI-ERVI-IKAQQLRLKALE---LVVKKVLSPTDAAKFFVAFERIQNAIHQVS 299
               E K +  + +  + Q L  + L      +  +     A           N  H   
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII-----AESIRDGLATWDNWKHVNC 352

Query: 300 EQQKLGKVLDT 310
           +  KL  ++++
Sbjct: 353 D--KLTTIIES 361

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	319
2y39_A	118	Nickel and cobalt resistance protein CNRR; metal b	96.51
3itf_A	145	Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxr	95.47
3o39_A	108	Periplasmic protein related to spheroblast format;	92.7
3oeo_A	138	Spheroplast protein Y; LTXXQ, extracytoplasmic str	91.89

>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*

Probab=96.51  E-value=0.023  Score=47.51  Aligned_cols=91  Identities=9%  Similarity=0.077  Sum_probs=66.3

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLKA  267 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEdaLsq~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~~T  267 (319)
                      .|.||++|...|+.+...-.....+|..+|...-.-|+ ....   .++.+|..    +..++.....   ..-.|+..|
T Consensus        18 ~L~Lt~~Q~~~leaie~~fa~~r~~le~emRaan~~La-~ai~---~~~~~~p~----V~aaid~~h~---~mG~LQkeT   86 (118)
T 2y39_A           18 AVPLDANEREILELKEDAFAQRRREIETRLRAANGKLA-DAIA---KNPAWSPE----VEAATQEVER---AAGDLQRAT   86 (118)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH---HCCSCCHH----HHHHHHHHHH---HHHHHHHHH
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH---hccccCHH----HHHHHHHHHH---HHHHHHHHH
Confidence            67899999999999999999999999999988888887 4331   11223332    3333333333   444588899


Q ss_pred             ---HHHHHHhhCCHHHHHHHHHHHHH
Q 020973          268 ---LELVVKKVLSPTDAAKFFVAFER  290 (319)
Q Consensus       268 ---L~~lv~~ILTp~QAA~fLlA~~e  290 (319)
                         +-.|. .||||-|++.|=-.+.+
T Consensus        87 i~HvfeMR-~VLtPeQ~~~fd~~vv~  111 (118)
T 2y39_A           87 LVHVFEMR-AGLKPEHRPAYDRVLID  111 (118)
T ss_dssp             HHHHHHHH-HHSCGGGHHHHHHHHHH
T ss_pred             HHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence               67777 99999999999765544

>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A

Probab=95.47  E-value=0.14  Score=43.89  Aligned_cols=92  Identities=13%  Similarity=0.182  Sum_probs=62.7

Q ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHH
Q 020973          187 SSKSESSDAERLLSQVMHEIRIEEAIID-EEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRL  265 (319)
Q Consensus       187 ~~L~LTeqQl~~I~~Lq~st~qaEdaLs-q~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~  265 (319)
                      ..|.||++|...|..|....+.+...++ ..+..++.-+..+         ++-.   +.+.+.++.+...-.+.--.|.
T Consensus        42 ~~L~LTdeQkqqir~L~~~~r~~~~~~~~~~r~~l~~Li~ad---------~fDe---aa~ral~~~~~~~~~e~~v~r~  109 (145)
T 3itf_A           42 DGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAE---------NFDE---NAVRAQAEKMANEQIARQVEMA  109 (145)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCS---------SCCH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHccC---------CCCH---HHHHHHHHHHHHHHHHHHHHHH
Confidence            3677999999999999988887655442 2334444333211         1111   2355566666666666677889


Q ss_pred             HHHHHHHHhhCCHHHHHHHHHHHHHH
Q 020973          266 KALELVVKKVLSPTDAAKFFVAFERI  291 (319)
Q Consensus       266 ~TL~~lv~~ILTp~QAA~fLlA~~e~  291 (319)
                      ++-.+|. .||||-|-+.|---..+-
T Consensus       110 k~~~qiy-~vLTPEQk~ql~e~~~~r  134 (145)
T 3itf_A          110 KVRNQMY-RLLTPEQQAVLNEKHQQR  134 (145)
T ss_dssp             HHHHHHH-TTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-hhCCHHHHHHHHHHHHHH
Confidence            9999999 999999999987654443

>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}

Probab=92.70  E-value=0.28  Score=39.97  Aligned_cols=85  Identities=11%  Similarity=0.127  Sum_probs=52.1

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEAIID-EEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLK  266 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEdaLs-q~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~~  266 (319)
                      .|.||++|...|-.|....+..-+..+ .....++.-+. ..   .+     -..   .|.+-++.+...-.+.--.|.+
T Consensus        15 ~L~LTd~Qk~qir~L~~~~r~~~~~~~~~~r~~m~~Li~-ad---~F-----DEa---aar~l~~~~~~~~~e~~v~~~r   82 (108)
T 3o39_A           15 DLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIA-SD---TF-----DKA---KAEAQIAKMEEQRKANMLAHME   82 (108)
T ss_dssp             CSCCCHHHHHHHHHHHHTTTTSCCCCCHHHHHHHHHHHS-SS---SC-----CHH---HHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHhc-cC---CC-----CHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence            466999999999999887765532221 22344443333 11   11     111   2444444444444444456778


Q ss_pred             HHHHHHHhhCCHHHHHHHH
Q 020973          267 ALELVVKKVLSPTDAAKFF  285 (319)
Q Consensus       267 TL~~lv~~ILTp~QAA~fL  285 (319)
                      +-++|. .||||-|-+.|-
T Consensus        83 ~~~qmy-~lLTPEQk~q~~  100 (108)
T 3o39_A           83 TQNKIY-NILTPEQKKQFN  100 (108)
T ss_dssp             HHHHHH-TTSCHHHHHHHH
T ss_pred             HHHHHH-HhCCHHHHHHHH
Confidence            899999 999999998874

>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}

Probab=91.89  E-value=0.13  Score=43.36  Aligned_cols=91  Identities=12%  Similarity=0.124  Sum_probs=57.9

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccccccccchhhhhhHHHHHHHHHHHHHHHHHHhHHHHH
Q 020973          188 SKSESSDAERLLSQVMHEIRIEEA-IIDEEMAEIQATCVLHLPFASLNKKRLYGSALGFIQKEFKKIERVIIKAQQLRLK  266 (319)
Q Consensus       188 ~L~LTeqQl~~I~~Lq~st~qaEd-aLsq~ma~lQqslA~d~~~~~~~~~~~g~~A~~~a~~kl~~Le~~l~qAD~LR~~  266 (319)
                      .|.||++|...|..|....+..-. .+-...+.++.-+..+.    +     -   .+.+.+.++.+...-.+.--.|.+
T Consensus        31 ~L~LT~eQ~~qir~i~~~~r~~~~~~~~~~r~~l~~Li~a~~----f-----D---eaav~al~~~~~~~~~e~~~~~~~   98 (138)
T 3oeo_A           31 DLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIITSDT----F-----D---KVKAEAQIAKMEEQRKANMLAHME   98 (138)
T ss_dssp             CSCCCTTHHHHHHHHHHHHSSSSCCCCTTHHHHHHHHHTCSS----C-----C---HHHHHHHHGGGSHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----C-----C---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            788999999999999887765422 11122234443333111    1     1   113445555555556666667889


Q ss_pred             HHHHHHHhhCCHHHHHHHHHHHHHH
Q 020973          267 ALELVVKKVLSPTDAAKFFVAFERI  291 (319)
Q Consensus       267 TL~~lv~~ILTp~QAA~fLlA~~e~  291 (319)
                      +..+|. .||||-|-+.|---+.+-
T Consensus        99 ~~~~~~-~vLTPEQr~q~~~~~~kr  122 (138)
T 3oeo_A           99 TQNKIY-NILTPEQKKQFNANFEKR  122 (138)
T ss_dssp             HHHHHH-TTSCHHHHHHHHHHTC--
T ss_pred             HHHHHH-HhCCHHHHHHHHHHHHHH
Confidence            999999 999999999987665553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00