Citrus Sinensis ID: 021081

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
Protein Sequence
MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETSTEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV
Secondary Structure (PSIPRED)
cccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccEEEcHHHHHHHHHHHHHHHHHHHHcccHHcccccHcHHHHHHHHHccccccccEccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccc
Coil and Loop (DISEMBL)
MAMQTVYFKehhegnghnqngqlssvhssapwwsslgsqsvygascgqlkplsmetsteeagqtldkpstthfsffpgdvkssgdgqklppaislqsalpenpgcfelgfgqpmicakypyadqyyGVFSAYGaqisgrimlplnlatddgpiyvnakqyhGIIRRRKSRAKAVLENkitrkrkpymhhsrhlhamrrprgcggrflntktrdgsgrteeKKTCIQQLlqptgsqssevlqsesgtlsspketngsgpnlsgsevtsmysrgefghfrinhlgppvhsfsgimdtgrgivmpsqwvaaadnccnlkv
Flexible Loop (DISEMBL)
MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETSTEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAkqyhgiirrrksrakavlenkitrkrkpymhhsrhlhamrrprgcggrflntktrdgsgrteeKKTCIQQllqptgsqssevLQSEsgtlsspketngsgpnlsgSEVTSMYSRGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV
Low Complexity Region (SEG)
MAMQTVYFKEHHEGNGHNQNGQLssvhssapwwssLGSQSVYGASCGQLKPLSMETSTEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV
Disordered region (IsUnstruct)
*******************************WW*********************************************************************PGCFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRK****AVL***********************************************************************************************RGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAADNCCN***
Disordered Region (DISOPRED)
*******************************WWSS*****************************************************************************************************************DDGPIYVNAKQYHGIIRRRKS******************HHSRHLHAMRRPRGCGG*********************************************************************************************GIVMPSQWVAAADNCCNLK*
Disordered Region (DISEMBL)
MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPL*************DKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTK*************CIQQLLQ********************************SEVTSMYSRGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV
Disordered Region (DISPRO)
*AMQTVYFKEHHEGN*HNQNGQLSS**SS**********************************************************************PENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFL********************************************************************H*RINHLGPPVHSFSGI*DTGRGIVMPSQWVAAADNCCNLK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETSTEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	317	2.2.26 [Sep-21-2011]
Q8LFU0	269	Nuclear transcription fac	yes	no	0.782	0.921	0.472	9e-60
Q9M9X4	295	Nuclear transcription fac	no	no	0.823	0.884	0.452	9e-57
Q8VY64	198	Nuclear transcription fac	no	no	0.438	0.702	0.441	8e-28
Q9LXV5	272	Nuclear transcription fac	no	no	0.413	0.481	0.448	3e-25
Q93ZH2	340	Nuclear transcription fac	no	no	0.813	0.758	0.314	3e-25
Q84JP1	190	Nuclear transcription fac	no	no	0.315	0.526	0.5	2e-24
Q945M9	303	Nuclear transcription fac	no	no	0.369	0.386	0.461	9e-24
Q9LNP6	328	Nuclear transcription fac	no	no	0.482	0.466	0.384	7e-23
Q9SYH4	308	Nuclear transcription fac	no	no	0.233	0.240	0.6	6e-21
Q9LVJ7	308	Nuclear transcription fac	no	no	0.305	0.314	0.489	9e-21

>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana GN=NFYA10 PE=2 SV=2

 Score =  230 bits (587), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 140/296 (47%), Positives = 178/296 (60%), Gaps = 48/296 (16%)

Query: 31  PWWSSLGSQ-----SVYGASCGQLKPLSMETSTEEAGQTLDKPSTTHFSFFPGDVKSSGD 85
           PWW++ GSQ     S+ G +      +   T+  E G    + STT F+F PG  KSS D
Sbjct: 13  PWWNAFGSQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQTSTTLFTFSPGGEKSSRD 72

Query: 86  GQKLPPAISLQSALPENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQ-ISGRIMLPL 144
             K   A ++QSA      CFE GF QPM+  K+P+ +QYYGV SAYG+Q  SGR+M+PL
Sbjct: 73  VPKPHVAFAMQSA------CFEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRSSGRVMIPL 126

Query: 145 NLATD-DGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCG 203
            + T+ DG IYVN+KQYHGIIRRR+SRAKA    K++R RKPYMHHSRHLHAMRRPRG G
Sbjct: 127 KMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHAMRRPRGSG 183

Query: 204 GRFLNTKTRDGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGS 263
           GRFLNTKT D + ++           +P+ SQSSEV   E+ T++S +E N S  NLS S
Sbjct: 184 GRFLNTKTADAAKQS-----------KPSNSQSSEVFHPENETINSSREANES--NLSDS 230

Query: 264 EVTSMYSRGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAADN--CCNLKV 317
            VTSM       +F            S    +  G+VMP +W AAA +  CC L +
Sbjct: 231 AVTSM------DYF-----------LSSSAYSPGGMVMPIKWNAAAMDIGCCKLNI 269

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana GN=NFYA2 PE=2 SV=1

 Score =  220 bits (561), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 159/351 (45%), Positives = 198/351 (56%), Gaps = 90/351 (25%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETSTE- 59
           MAMQTV            + G  S+  +S  WW++ GSQ         L P S+   ++ 
Sbjct: 1   MAMQTV------------REGLFSAPQTS--WWTAFGSQP--------LAPESLAGDSDS 38

Query: 60  ----------EAGQTLDKPS--TTHFSFFPGDVKSSGDGQKLPP-----AISLQSALPEN 102
                     E GQ +DK S   TH +F  GDVKS     +L P       S+QS     
Sbjct: 39  FAGVKVGSVGETGQRVDKQSNSATHLAFSLGDVKSP----RLVPKPHGATFSMQSP---- 90

Query: 103 PGCFELGFGQPMICAKYPYADQ-YYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYH 161
             C ELGF QP I  KYPY +Q YYGV SAYG+Q   R+MLPLN+ T+D  IYVN+KQYH
Sbjct: 91  --CLELGFSQPPIYTKYPYGEQQYYGVVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYH 146

Query: 162 GIIRRRKSRAKA--VLENKI--TRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTR--DGS 215
           GIIRRR+SRAKA  VL+ K   +R RKPYMHHSRHLHA+RRPRG GGRFLNTK++  + S
Sbjct: 147 GIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENS 206

Query: 216 GRTEEKKTCIQQLL-----QPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYS 270
           G   +K     Q+      Q + SQ+SEV+  E+GT++       +G N+SGSEVTSM  
Sbjct: 207 GTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNL-----SNGLNVSGSEVTSM-- 259

Query: 271 RGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAA---DN-CCNLKV 317
                +F    L  PVHS         G+VMPS+W+AAA   DN CCN K 
Sbjct: 260 ----NYF----LSSPVHSLG-------GMVMPSKWIAAAAAMDNGCCNFKT 295

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1

 Score =  124 bits (311), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 96/163 (58%), Gaps = 24/163 (14%)

Query: 110 FGQPMICAKYPYADQYY-GVFS--AY------GAQISGRIM----LPLNLATDDGPIYVN 156
           + +PM    YPY D YY  VF+  AY      G Q+    M    +PL     + P++VN
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVN 103

Query: 157 AKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSG 216
           AKQYHGI+RRR+SRAK    N+  + +KPYMH SRHLHA+RRPRGCGGRFLN K  +G  
Sbjct: 104 AKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDH 163

Query: 217 RTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPN 259
           + EE+ T  +       S++S  L+SE   +++      SGPN
Sbjct: 164 KEEEEATSDE-----NTSEASSSLRSEKLAMAT------SGPN 195

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 87/156 (55%), Gaps = 25/156 (16%)

Query: 110 FGQPMICAKYPYADQYYG-VFSAYGAQISG----------RIMLPLNLATDDGPIYVNAK 158
            G  + C   PY D YYG +  AYG Q  G          R  LPL++A +  P+YVNAK
Sbjct: 122 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQE--PVYVNAK 179

Query: 159 QYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKT----RDG 214
           QY GI+RRRK+RAKA LE K+ R RKPY+H SRH HAMRR R  GGRF          D 
Sbjct: 180 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDA 239

Query: 215 SGRTEEKKTCIQQLLQPTGSQSSEVLQSESG-TLSS 249
            GR  E+ +        T S  SE ++++S  TL+S
Sbjct: 240 GGRDRERGSA-------TNSSGSEQVETDSNETLNS 268

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2

 Score =  115 bits (289), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 149/315 (47%), Gaps = 57/315 (18%)

Query: 20  NGQLSSVHSSAPW------WSSLGSQSVYG----ASCGQLK----PLSMETSTEEAGQTL 65
           N + S+ HS+ P+      W  + + SV      A    LK    P  ++T+ + + Q  
Sbjct: 7   NKKDSATHSTLPYLNTSISWGVVPTDSVANRRGSAESLSLKVDSRPGHIQTTKQISFQDQ 66

Query: 66  DKPSTTHFSFFPGDVKSSGDGQ---------KLPPAISLQSALPENP------GCFELGF 110
           D  ST        +V SSGD           K    I+ +     NP      G   + F
Sbjct: 67  DSSSTQSTGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFASNPKQGSMTGFPNIHF 126

Query: 111 GQPMICAKYPYADQYYG--VFSAYGAQ-----------ISGRIMLPLNLATDDGPIYVNA 157
                   + YAD +YG  + + Y  Q           I GR+ LP  L T+  P++VNA
Sbjct: 127 APAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAEL-TETDPVFVNA 185

Query: 158 KQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTK-----TR 212
           KQYH I+RRR+ RAK   +NK+ R RKPY+H SRH+HA++RPRG GGRFLNTK     + 
Sbjct: 186 KQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESE 245

Query: 213 DGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRG 272
             + R +E+    QQ+     ++ + + + E+  L + K+ + +    SGS++TS+    
Sbjct: 246 QAAAREQEQDKLGQQV-----NRKTNMSRFEAHMLQNNKDRSST---TSGSDITSVSDGA 297

Query: 273 E-FGHFRINHLGPPV 286
           + FGH      G P 
Sbjct: 298 DIFGHTEFQFSGFPT 312

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 10/110 (9%)

Query: 114 MICAKYPYADQYY-GVFSAYGAQISG---RIM------LPLNLATDDGPIYVNAKQYHGI 163
           M   +YPY D YY  +F+      +G   ++M      +PL     + P++VNAKQYHGI
Sbjct: 53  MAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGI 112

Query: 164 IRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRD 213
           +RRR+SRA+   +NK+ + RKPY+H SRHLHA+RRPRGCGGRFLN K  D
Sbjct: 113 LRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED 162

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1

 Score =  111 bits (277), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 13/130 (10%)

Query: 120 PYADQYY-GVFSAYGAQISG----------RIMLPLNLATDDGPIYVNAKQYHGIIRRRK 168
           PY D YY GV  AYG    G          R+ LP  +A +  P++VNAKQY  I+RRR+
Sbjct: 126 PYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE--PVFVNAKQYQAILRRRQ 183

Query: 169 SRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQL 228
           +RAKA LE K+ + RKPY+H SRH HAMRRPRG GGRF      + S R  E+K+     
Sbjct: 184 ARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVT 243

Query: 229 LQPTGSQSSE 238
             P+ S S +
Sbjct: 244 QSPSSSNSDQ 253

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2

 Score =  108 bits (269), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 11/164 (6%)

Query: 119 YPYADQYYGVF--SAYGAQIS------GRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSR 170
           + YAD ++G    +AY  Q +       R+ LP +L  ++ P++VNAKQ+H I+RRR+ R
Sbjct: 133 FHYADPHFGGLMPAAYLPQATIWNPQMTRVPLPFDLIENE-PVFVNAKQFHAIMRRRQQR 191

Query: 171 AKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQLLQ 230
           AK   +NK+ + RKPY+H SRH+HA++RPRG GGRFLNTK    S  T+ K+    Q   
Sbjct: 192 AKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES--TDPKQDMPIQQQH 249

Query: 231 PTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEF 274
            TG+ S  VL     +      T       S S+  +++   EF
Sbjct: 250 ATGNMSRFVLYQLQNSNDCDCSTTSRSDITSASDSVNLFGHSEF 293

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1

 Score =  101 bits (252), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 59/75 (78%), Gaps = 1/75 (1%)

Query: 136 ISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHA 195
           +S R+ LP ++  ++ PI+VNAKQYH I+RRRK RAK   +NK+ + RKPY+H SRHLHA
Sbjct: 164 VSSRVPLPHHIQENE-PIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHA 222

Query: 196 MRRPRGCGGRFLNTK 210
           ++R RG GGRFLNTK
Sbjct: 223 LKRARGSGGRFLNTK 237

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Involved in the blue light (BL) and abscisic acid (ABA) signaling pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana GN=NFYA6 PE=2 SV=1

 Score =  101 bits (251), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 1/98 (1%)

Query: 119 YPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENK 178
           +PYA Q+          +  R+ LP N+  ++ PI+VNAKQY  I+RRR+ RAK   +NK
Sbjct: 140 FPYASQHTVQHPQIRGLVPSRMPLPHNIPENE-PIFVNAKQYQAILRRRERRAKLEAQNK 198

Query: 179 ITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSG 216
           + + RKPY+H SRHLHA++R RG GGRFLNTK    S 
Sbjct: 199 LIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESN 236

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
388523183	333	nuclear transcription factor Y subunit A	0.993	0.945	0.608	1e-107
193237557	328	transcription factor CCAAT [Lotus japoni	0.987	0.954	0.623	1e-107
356505443	328	PREDICTED: nuclear transcription factor	0.987	0.954	0.627	1e-107
388498772	328	unknown [Lotus japonicus]	0.987	0.954	0.614	1e-105
356572639	330	PREDICTED: nuclear transcription factor	0.993	0.954	0.617	1e-105
225463280	330	PREDICTED: nuclear transcription factor	0.993	0.954	0.611	1e-105
193237567	332	transcription factor CCAAT [Lotus japoni	0.977	0.933	0.607	1e-104
356534560	326	PREDICTED: LOW QUALITY PROTEIN: nuclear	0.977	0.950	0.621	1e-101
356500581	330	PREDICTED: nuclear transcription factor	0.993	0.954	0.611	1e-101
296089371	309	unnamed protein product [Vitis vinifera]	0.927	0.951	0.603	3e-97

>gi|388523183|gb|AFK49644.1| nuclear transcription factor Y subunit A2 [Medicago truncatula]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/335 (60%), Positives = 246/335 (73%), Gaps = 20/335 (5%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSS---VHSSAPWWSSLGSQSVYGASCGQLKPLSME-- 55
           MAMQTVY KEH EG  HN  GQLSS     ++APWWS  GSQS+YG S GQ+K  S+E  
Sbjct: 1   MAMQTVYLKEH-EGIAHNFVGQLSSGTNNSAAAPWWSGFGSQSLYGESGGQIKSFSLEPP 59

Query: 56  -------TSTEEAGQ----TLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPG 104
                   S++++ +       K  T HF+ FP D K SGD QK   AISLQSA+P+ P 
Sbjct: 60  MSVVDQLASSKQSARGTEHVFGKGHTNHFTIFPDDFKMSGDAQKPHTAISLQSAVPDTPN 119

Query: 105 CFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGII 164
            FELGFGQPMIC KYPYADQ+YG+ S YG QI GRIMLPLN+ +DDGPIYVNAKQY+GII
Sbjct: 120 RFELGFGQPMICTKYPYADQFYGLISTYGPQIQGRIMLPLNMTSDDGPIYVNAKQYNGII 179

Query: 165 RRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNT-KTRDGSGRTEEKKT 223
           RRR+SRAKAVL +K+ ++ KPYMH SRHLHAMRRPRGCGGRFLNT K+ +G G+T  K  
Sbjct: 180 RRRQSRAKAVLGHKLIKRNKPYMHESRHLHAMRRPRGCGGRFLNTKKSANGDGKTGSKVH 239

Query: 224 CI-QQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHL 282
               Q LQ +GSQSSE+L+S+ GTL+S KETNGS PN+SGSEVTS+YSRG    F ++HL
Sbjct: 240 KFGGQQLQFSGSQSSELLESDVGTLNSSKETNGSSPNISGSEVTSLYSRGNHDSFTVDHL 299

Query: 283 GPPVHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV 317
           G  V S + ++D GRG++MP++WVAA  NCCNLK 
Sbjct: 300 GSSVLSMADMIDGGRGVIMPTKWVAAG-NCCNLKA 333

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|193237557|dbj|BAG50055.1| transcription factor CCAAT [Lotus japonicus]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/332 (62%), Positives = 242/332 (72%), Gaps = 19/332 (5%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSME----- 55
           MAMQT    EH EG  HN  GQLSS  +SAPWWS+ GSQ+VYG SCGQ+KP S+E     
Sbjct: 1   MAMQTANLIEH-EGIAHNFVGQLSSA-TSAPWWSAFGSQAVYGESCGQMKPFSLEPPISV 58

Query: 56  -------TSTEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFEL 108
                   S   A Q L K  TT F+ FP D K  G+ QK    ISLQS+  +    FEL
Sbjct: 59  DQLAAGKQSARGAEQVLAKGHTTQFTIFPDDCKVLGNAQKPQTTISLQSSPTDTHSRFEL 118

Query: 109 GFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRK 168
           GF QPMICAKYPY DQ+YG+FS YG QISGRIMLPLNL TD+GPIYVNAKQYHGIIRRR+
Sbjct: 119 GFSQPMICAKYPYTDQFYGLFSTYGPQISGRIMLPLNLTTDEGPIYVNAKQYHGIIRRRQ 178

Query: 169 SRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTK-TRDGSGRT--EEKKTCI 225
           SRAKAVL+ K+T++RKPY+H SRHLHA+RRPRGCGGRFLNTK + +G+G+T  + KKT  
Sbjct: 179 SRAKAVLDRKMTKRRKPYLHESRHLHALRRPRGCGGRFLNTKVSANGNGKTGRDVKKTGG 238

Query: 226 QQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPP 285
           +Q LQ +GSQ S+V QSE GTL+S KETNGSGPN+SG EVTSMYSRG F  F  NHLG  
Sbjct: 239 EQ-LQSSGSQGSDVFQSEVGTLNSSKETNGSGPNVSGLEVTSMYSRGGFDTFSFNHLGSS 297

Query: 286 VHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV 317
           V+  + ++D GRGI MP++WVAA  N CNL  
Sbjct: 298 VYPLADMVDCGRGI-MPTKWVAAGGNSCNLNT 328

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505443|ref|XP_003521500.1| PREDICTED: nuclear transcription factor Y subunit A-10 isoform 1 [Glycine max] gi|356505445|ref|XP_003521501.1| PREDICTED: nuclear transcription factor Y subunit A-10 isoform 2 [Glycine max]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/330 (62%), Positives = 244/330 (73%), Gaps = 17/330 (5%)

Query: 3   MQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVY-GASCGQLKPLSMETS---- 57
           MQTVY KEH EGN HN  G LSS  +SAPWWS+ GSQSV+ G SCGQ+KP S+E      
Sbjct: 1   MQTVYLKEH-EGNAHNFVGTLSSA-ASAPWWSAFGSQSVHQGESCGQVKPFSLELPNCID 58

Query: 58  --------TEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFELG 109
                      A Q L K   T F+ FP D K S D QKL   +SLQS+L +    FE+G
Sbjct: 59  QLAATKPLARGADQVLGKGHITQFTIFPDDCKMSDDAQKLQTTMSLQSSLTDPQSRFEIG 118

Query: 110 FGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKS 169
           F  P ICAKYPY DQ+YG+FSAY  QISGRIMLPLN+ +DD PIYVNAKQYHGIIRRR+S
Sbjct: 119 FSLPTICAKYPYTDQFYGLFSAYAPQISGRIMLPLNMTSDDEPIYVNAKQYHGIIRRRQS 178

Query: 170 RAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTK-TRDGSGRT-EEKKTCIQQ 227
           RAKAVL++K+T++RKPYMH SRHLHAMRRPRGCGGRFLNTK + DG+G+   E    + +
Sbjct: 179 RAKAVLDHKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTKNSVDGNGKIGNEVHKTVGE 238

Query: 228 LLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPPVH 287
            LQ +GSQSSE LQSE GT +S KETNGS PN+SGSEVTSMYSRG    F +NHLG  VH
Sbjct: 239 QLQSSGSQSSEFLQSEVGTFNSSKETNGSSPNISGSEVTSMYSRGGLDSFSLNHLGSAVH 298

Query: 288 SFSGIMDTGRGIVMPSQWVAAADNCCNLKV 317
           SF+ ++D GRG+++P++WVAAA NCCNLKV
Sbjct: 299 SFADMIDGGRGMIIPTKWVAAAGNCCNLKV 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498772|gb|AFK37452.1| unknown [Lotus japonicus]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/332 (61%), Positives = 240/332 (72%), Gaps = 19/332 (5%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSME----- 55
           MAMQT    EH EG  HN  GQLSS  +SAPWWS+ GSQ+VYG SCGQ+KP S+E     
Sbjct: 1   MAMQTANLIEH-EGIAHNFVGQLSSA-TSAPWWSAFGSQAVYGESCGQMKPFSLEPPISV 58

Query: 56  -------TSTEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFEL 108
                   S   A Q L K  T  F+ FP D K  G+ QK    ISLQS+  +    FEL
Sbjct: 59  DQLAAGKQSARGAEQVLAKGHTAQFTIFPDDCKVLGNAQKPQTTISLQSSPTDTHSRFEL 118

Query: 109 GFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRK 168
           GF QPMICAKYPY DQ+YG+FS YG QISGRIMLPLN+ TD+GPIYVNAKQYHGIIRRR+
Sbjct: 119 GFSQPMICAKYPYTDQFYGLFSTYGPQISGRIMLPLNMTTDEGPIYVNAKQYHGIIRRRQ 178

Query: 169 SRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTK-TRDGSGRT--EEKKTCI 225
           SRAKAVL+ K+T++RKPY+H SRHLHA+RRPRGCGGRFLNTK + +G+G+T  + KKT  
Sbjct: 179 SRAKAVLDRKMTKRRKPYLHESRHLHALRRPRGCGGRFLNTKVSANGNGKTGRDVKKTGG 238

Query: 226 QQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPP 285
           +Q LQ +GSQ S+V QSE GTL+S KETNGS PN+SG EVTSMYSRG F  F  NHLG  
Sbjct: 239 EQ-LQSSGSQGSDVFQSEVGTLNSSKETNGSSPNVSGLEVTSMYSRGGFDTFSFNHLGSS 297

Query: 286 VHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV 317
           V+  + ++D GRGI MP++WVAA  N CNL  
Sbjct: 298 VYPLADMVDCGRGI-MPTKWVAAGGNSCNLNT 328

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572639|ref|XP_003554475.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Glycine max]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/332 (61%), Positives = 247/332 (74%), Gaps = 17/332 (5%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVY-GASCGQLKPLSMET--- 56
           MAMQTVY K+H EGN HN  G LSS  +SAPWWS+ GSQSV+ G SCGQ+KP ++E    
Sbjct: 1   MAMQTVYLKKH-EGNAHNFVGTLSSA-ASAPWWSAFGSQSVHQGESCGQMKPFALELPNC 58

Query: 57  ---------STEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFE 107
                    S   A Q L +  TT F+ FP   K S D QKL   ISLQS+L +    FE
Sbjct: 59  IDQLAATKLSARGAEQVLGEGHTTQFTIFPDGCKMSDDAQKLQTTISLQSSLTDPHSRFE 118

Query: 108 LGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRR 167
           +GF QPM+CAKYPY DQ+YG+FSAY  QISGRIMLPLN+++DDGPIYVNAKQYHGIIRRR
Sbjct: 119 IGFSQPMLCAKYPYTDQFYGLFSAYAPQISGRIMLPLNMSSDDGPIYVNAKQYHGIIRRR 178

Query: 168 KSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTR-DGSGRT-EEKKTCI 225
           +SRAKAVL++K+T++ KPYMH SRHLHAMRRPRG GGRFLNT++  +G+G+   E    +
Sbjct: 179 QSRAKAVLDHKLTKRCKPYMHESRHLHAMRRPRGSGGRFLNTRSSINGNGKLGNEVHKTV 238

Query: 226 QQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPP 285
            + LQ + SQSSE LQSE GTL+S KETNGS PN+SGSEVTSMYSRG    F +NHLG  
Sbjct: 239 GEQLQSSDSQSSEFLQSEVGTLNSSKETNGSSPNISGSEVTSMYSRGGLDSFSLNHLGSA 298

Query: 286 VHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV 317
           VHSF+ ++D GRG+++P +WVAAA NC NLKV
Sbjct: 299 VHSFANMIDGGRGMIIPPKWVAAAGNCYNLKV 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463280|ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Vitis vinifera]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/332 (61%), Positives = 233/332 (70%), Gaps = 17/332 (5%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSME----- 55
           M MQT YFKEH  G+ HN  GQLSS  ++ PWWS LGSQSVY  S  QLK LSME     
Sbjct: 1   MTMQTTYFKEH-AGSAHNPTGQLSSA-AAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKG 58

Query: 56  ---TSTEE----AGQTLDKPSTTHFSFFPGDVKSSGDGQK---LPPAISLQSALPENPGC 105
              T+ ++    A    DK ++T F+ F G+ K+S D QK   L   IS+QS +PE    
Sbjct: 59  DQLTAIKQVELGAEDGTDKGNSTQFTIFSGECKNSEDAQKPQPLQATISMQSTIPEYQTR 118

Query: 106 FELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIR 165
           FELGFGQPM+C KYPYADQ YGVFSAYG Q+ GRIMLPL+L TDDGPIYVNAKQYHGIIR
Sbjct: 119 FELGFGQPMVCVKYPYADQCYGVFSAYGHQVMGRIMLPLSLTTDDGPIYVNAKQYHGIIR 178

Query: 166 RRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCI 225
           RR+SRAKA LENK+TR RKPYMH SRHLHAMRRPRGCGGRFL      G   T+ KK   
Sbjct: 179 RRQSRAKAELENKLTRARKPYMHESRHLHAMRRPRGCGGRFLKKNLNGGKCGTDMKKVDN 238

Query: 226 QQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPP 285
           +QL QPTGSQ SEVLQS+ G ++SPKE NG+   L GSEVTSMYSR     F +N++   
Sbjct: 239 RQLSQPTGSQISEVLQSDGGNMNSPKEANGNLSKLLGSEVTSMYSRRYLHQFPVNNVQAS 298

Query: 286 VHSFSGIMDTGRGIVMPSQWVAAADNCCNLKV 317
           V +   +MD G GIVMPS+WVAAADN CN K 
Sbjct: 299 VDTLVDMMDRGHGIVMPSKWVAAADNRCNPKA 330

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|193237567|dbj|BAG50060.1| transcription factor CCAAT [Lotus japonicus]

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 244/339 (71%), Gaps = 29/339 (8%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETS--- 57
           MAMQTVY KEH E  GH+  GQLSSV +SAPWW   GSQSVYG SCGQ+KP S+E S   
Sbjct: 1   MAMQTVYLKEH-ERMGHSSVGQLSSV-TSAPWW---GSQSVYGDSCGQIKPFSLEFSNYV 55

Query: 58  ---------TEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSAL----PENPG 104
                       A Q  DK  TT F+ F  D K SG+ Q L   +SLQ ++    P N  
Sbjct: 56  DHFAANKNPVRGAEQLFDKGLTTQFTIFSDDCKMSGEAQNLEATLSLQPSVTVAEPRNR- 114

Query: 105 CFELGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGII 164
            FELGF QPMICAKYPY DQ+YG+FSAYG QI GR+MLPLNL+TDDGPIYVNAKQYHGII
Sbjct: 115 -FELGFNQPMICAKYPYMDQFYGLFSAYGPQIPGRMMLPLNLSTDDGPIYVNAKQYHGII 173

Query: 165 RRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTK-TRDGSGRT----E 219
           RRR+SRAKAV ENK+ ++ KPYMH SRHLHAMRRPRGCGGRFLNT+ + DG+G++     
Sbjct: 174 RRRQSRAKAVQENKLIKRSKPYMHESRHLHAMRRPRGCGGRFLNTRNSSDGNGKSGSELH 233

Query: 220 EKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRI 279
           +K   + + +Q + SQSSEVLQSE GTL+S KETNGS PN+SGSEVTSM S G    F +
Sbjct: 234 KKTGGLGRHMQSSASQSSEVLQSEVGTLNSSKETNGSSPNISGSEVTSMCSLGGLDSFAV 293

Query: 280 NHLGPPV-HSFSGIMDTGRGIVMPSQWVAAADNCCNLKV 317
           NHLG  + HS + ++D G GI+MP++WV AA +C NLKV
Sbjct: 294 NHLGSAIHHSLADMIDGGHGIIMPTKWVGAAGSCFNLKV 332

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534560|ref|XP_003535821.1| PREDICTED: LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-10-like [Glycine max]

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/333 (62%), Positives = 238/333 (71%), Gaps = 23/333 (6%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETS--- 57
           MAMQTVY KEH EG  +N  GQLSSV +SAPWWS+LGSQ VYG  CGQ+KP S E S   
Sbjct: 1   MAMQTVYLKEH-EGLVYNSVGQLSSV-TSAPWWSALGSQPVYGEYCGQIKPFSFEISNYV 58

Query: 58  ---------TEEAGQTLDKP-STTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFE 107
                         Q LDK  +TT F+ FP D K SGD +     +SLQS+L E    FE
Sbjct: 59  DQFPAGKQAVRGVEQLLDKGHTTTQFTIFPDDCKMSGDAENPQATLSLQSSLAEPHNRFE 118

Query: 108 LGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRR 167
           +GF QPMICAKYPY DQ+YG+FSA+G QISGRIMLP+NL +DDGP YVNAKQYHGIIRRR
Sbjct: 119 IGFNQPMICAKYPYMDQFYGLFSAFGPQISGRIMLPINLTSDDGPTYVNAKQYHGIIRRR 178

Query: 168 KSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTK-TRDGSGRTEEKKTCI- 225
            SRAKAVLENK+ ++RKPYMH SRHLHA+RRPRGCGGRFLNTK + +G+GR E K     
Sbjct: 179 LSRAKAVLENKMIKRRKPYMHESRHLHALRRPRGCGGRFLNTKGSTNGNGRNESKVNKTG 238

Query: 226 QQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPP 285
            + LQ + SQSSEVL SE GTL+S KETN S PN+SGSEVTSMYSR  F  F +N LG  
Sbjct: 239 GRQLQSSASQSSEVLHSEVGTLNSSKETNRSSPNISGSEVTSMYSREGFDGFSVNRLGSS 298

Query: 286 VHSFSGIMDTGRGIVMPSQWVAAAD-NCCNLKV 317
           VH       +G GI+ P++WVAA   NCCNLKV
Sbjct: 299 VHX-----PSGHGIITPTKWVAAVSGNCCNLKV 326

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500581|ref|XP_003519110.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Glycine max]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/332 (61%), Positives = 240/332 (72%), Gaps = 17/332 (5%)

Query: 1   MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETS--T 58
           MAMQTVY KEH EG  H+  GQLSSV +SAPWWS+LGSQ VYG  CGQ+K  S+E S   
Sbjct: 1   MAMQTVYLKEH-EGLVHSSVGQLSSV-TSAPWWSALGSQPVYGEYCGQMKSFSLEISNYV 58

Query: 59  EEAG----------QTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFEL 108
           ++ G          Q LDK  TT F+ FP D K SGD Q     +SLQS+L E    FE+
Sbjct: 59  DQFGAGKQAARGVEQLLDKGHTTQFTIFPDDCKMSGDAQNPQATLSLQSSLAEPHNRFEI 118

Query: 109 GFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRK 168
           G  QPMICAKYPY DQ+YG+FSAYG QISGRIMLP+NL +D+GP YVNAKQYHGIIRRR+
Sbjct: 119 GVNQPMICAKYPYMDQFYGLFSAYGPQISGRIMLPINLTSDEGPTYVNAKQYHGIIRRRQ 178

Query: 169 SRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTR-DGSGRTE-EKKTCIQ 226
           SRAKAVLENK+ ++RKPYMH SRHLHA RRPRGCGGRFLNTK+  DG+G+ E E      
Sbjct: 179 SRAKAVLENKMIKRRKPYMHESRHLHATRRPRGCGGRFLNTKSSTDGNGKNESEVIKTSG 238

Query: 227 QLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPPV 286
           +  Q + SQSSEVLQSE G L+S K+TN S PN+SGSEVTSMYSR  F  F +N LG  V
Sbjct: 239 RQFQSSASQSSEVLQSEVGMLNSSKQTNRSSPNISGSEVTSMYSREGFDGFSVNPLGSSV 298

Query: 287 HSFSGIMDTGRGIVMPSQWVAAA-DNCCNLKV 317
           HS + ++ +  GI+ P++WVAA   NC NLK+
Sbjct: 299 HSLADMIGSEHGIIRPTKWVAAVPGNCYNLKI 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089371|emb|CBI39143.3| unnamed protein product [Vitis vinifera]

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 199/330 (60%), Positives = 224/330 (67%), Gaps = 36/330 (10%)

Query: 3   MQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSME------- 55
           MQT YFKEH  G+ HN  GQLSS  ++ PWWS LGSQSVY  S  QLK LSME       
Sbjct: 1   MQTTYFKEH-AGSAHNPTGQLSSA-AAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQ 58

Query: 56  -TSTEE----AGQTLDKPSTTHFSFFPGDVKSSGDGQK---LPPAISLQSALPENPGCFE 107
            T+ ++    A    DK ++T F+ F G+ K+S D QK   L   IS+QS +PE    FE
Sbjct: 59  LTAIKQVELGAEDGTDKGNSTQFTIFSGECKNSEDAQKPQPLQATISMQSTIPEYQTRFE 118

Query: 108 LGFGQPMICAKYPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRR 167
           LGFGQPM+C KYPYADQ YGVFSAYG Q+ GRIMLPL+L TDDGPIYVNAKQYHGIIRRR
Sbjct: 119 LGFGQPMVCVKYPYADQCYGVFSAYGHQVMGRIMLPLSLTTDDGPIYVNAKQYHGIIRRR 178

Query: 168 KSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQ 227
           +SRAKA LENK+TR RKPYMH SRHLHAMRRPRGCGGRFL      G   T+ KK   +Q
Sbjct: 179 QSRAKAELENKLTRARKPYMHESRHLHAMRRPRGCGGRFLKKNLNGGKCGTDMKKVDNRQ 238

Query: 228 LLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHLGPPVH 287
           L QPTGSQ SEVLQS+ G ++SPKE NG+   L GSEVTSMYSR      R  H      
Sbjct: 239 LSQPTGSQISEVLQSDGGNMNSPKEANGNLSKLLGSEVTSMYSR------RYLH------ 286

Query: 288 SFSGIMDTGRGIVMPSQWVAAADNCCNLKV 317
                   G GIVMPS+WVAAADN CN K 
Sbjct: 287 -------QGHGIVMPSKWVAAADNRCNPKA 309

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
TAIR|locus:2078072	295	NF-YA2 ""nuclear factor Y, sub	0.728	0.783	0.510	1.5e-53
TAIR|locus:2144113	269	NF-YA10 ""nuclear factor Y, su	0.665	0.784	0.519	3.1e-51
TAIR|locus:2061534	198	NF-YA4 ""nuclear factor Y, sub	0.429	0.686	0.46	2.2e-27
TAIR|locus:2182245	272	NF-YA1 ""nuclear factor Y, sub	0.466	0.544	0.429	9.7e-25
TAIR|locus:2032758	341	NF-YA3 ""nuclear factor Y, sub	0.451	0.419	0.402	2.6e-24
TAIR|locus:2028150	190	NF-YA7 ""nuclear factor Y, sub	0.331	0.552	0.486	5.3e-24
TAIR|locus:2014375	308	NF-YA5 ""nuclear factor Y, sub	0.233	0.240	0.6	1e-23
TAIR|locus:2007953	328	NF-YA8 ""nuclear factor Y, sub	0.678	0.655	0.336	1.1e-23
TAIR|locus:2088791	303	NF-YA9 ""nuclear factor Y, sub	0.447	0.468	0.426	1.8e-23
TAIR|locus:2088232	308	NF-YA6 ""nuclear factor Y, sub	0.511	0.525	0.353	9e-22

TAIR|locus:2078072 NF-YA2 ""nuclear factor Y, subunit A2"" [Arabidopsis thaliana (taxid:3702)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 142/278 (51%), Positives = 175/278 (62%)

Query:    57 STEEAGQTLDKPST--THFSFFPGDVKSSGDGQKLPPAISLQSALPENPGCFELGFGQPM 114
             S  E GQ +DK S   TH +F  GDVKS     +L P     +   ++P C ELGF QP 
Sbjct:    46 SVGETGQRVDKQSNSATHLAFSLGDVKSP----RLVPKPHGATFSMQSP-CLELGFSQPP 100

Query:   115 ICAKYPYADQ-YYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKA 173
             I  KYPY +Q YYGV SAYG+Q   R+MLPLN+ T+D  IYVN+KQYHGIIRRR+SRAKA
Sbjct:   101 IYTKYPYGEQQYYGVVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKA 158

Query:   174 --VLENK--ITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTR--DGSGRTEEKKTCIQQ 227
               VL+ K   +R RKPYMHHSRHLHA+RRPRG GGRFLNTK++  + SG   +K     Q
Sbjct:   159 AAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQ 218

Query:   228 LL-QP----TGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINHL 282
             +  QP    + SQ+SEV+  E+GT++       +G N+SGSEVTSM       +F    L
Sbjct:   219 IQSQPKPQQSNSQNSEVVHPENGTMNL-----SNGLNVSGSEVTSM------NYF----L 263

Query:   283 GPPVHSFSGIMDTGRGIVMPSQWVAAA---DN-CCNLK 316
               PVHS  G+       VMPS+W+AAA   DN CCN K
Sbjct:   264 SSPVHSLGGM-------VMPSKWIAAAAAMDNGCCNFK 294

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;IGI;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=ISS

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

TAIR|locus:2144113 NF-YA10 ""nuclear factor Y, subunit A10"" [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 122/235 (51%), Positives = 154/235 (65%)

Query:    36 LGSQSVYGASCGQLKPLSMETSTEEAGQTLDKPSTTHFSFFPGDVKSSGDGQKLPPAISL 95
             L ++S+ G +      +   T+  E G    + STT F+F PG  KSS D  K   A ++
Sbjct:    23 LTTESLSGEASDSFTGVKAVTTEAEQGVVDKQTSTTLFTFSPGGEKSSRDVPKPHVAFAM 82

Query:    96 QSALPENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQ-ISGRIMLPLNLATD-DGPI 153
             QSA      CFE GF QPM+  K+P+ +QYYGV SAYG+Q  SGR+M+PL + T+ DG I
Sbjct:    83 QSA------CFEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRSSGRVMIPLKMETEEDGTI 136

Query:   154 YVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRD 213
             YVN+KQYHGIIRRR+SRAKA    K++R RKPYMHHSRHLHAMRRPRG GGRFLNTKT D
Sbjct:   137 YVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTKTAD 193

Query:   214 GSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSM 268
              + +++           P+ SQSSEV   E+ T++S +E N S  NLS S VTSM
Sbjct:   194 AAKQSK-----------PSNSQSSEVFHPENETINSSREANES--NLSDSAVTSM 235

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

TAIR|locus:2061534 NF-YA4 ""nuclear factor Y, subunit A4"" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 69/150 (46%), Positives = 90/150 (60%)

Query:   110 FGQPMICAKYPYADQYY-GVFS--AY------GAQISGRIM----LPLNLATDDGPIYVN 156
             + +PM    YPY D YY  VF+  AY      G Q+    M    +PL     + P++VN
Sbjct:    44 YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVN 103

Query:   157 AKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSG 216
             AKQYHGI+RRR+SRAK    N+  + +KPYMH SRHLHA+RRPRGCGGRFLN K  +G  
Sbjct:   104 AKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDH 163

Query:   217 RTEEKKTCIQQLLQPTGSQSSEVL-QSESG 245
             + EE+ T  +   + + S  SE L  + SG
Sbjct:   164 KEEEEATSDENTSEASSSLRSEKLAMATSG 193

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009411 "response to UV" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009739 "response to gibberellin stimulus" evidence=RCA

GO:0009751 "response to salicylic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

TAIR|locus:2182245 NF-YA1 ""nuclear factor Y, subunit A1"" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 76/177 (42%), Positives = 99/177 (55%)

Query:    91 PAISLQSALPENPGCF--ELGFGQPMICAKYPYADQYYG-VFSAYGAQISG--------- 138
             PA+S+++ + + P     EL  G  + C   PY D YYG +  AYG Q  G         
Sbjct:   103 PALSIRN-MHDQPLVQPPEL-VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPR 160

Query:   139 -RIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMR 197
              R  LPL++A +  P+YVNAKQY GI+RRRK+RAKA LE K+ R RKPY+H SRH HAMR
Sbjct:   161 ERTALPLDMAQE--PVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMR 218

Query:   198 RPRGCGGRFLNTKT----RDGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESG-TLSS 249
             R R  GGRF          D  GR  E+ +        T S  SE ++++S  TL+S
Sbjct:   219 RARASGGRFAKKSEVEAGEDAGGRDRERGSA-------TNSSGSEQVETDSNETLNS 268

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;IGI;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0010262 "somatic embryogenesis" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0055046 "microgametogenesis" evidence=IMP

TAIR|locus:2032758 NF-YA3 ""nuclear factor Y, subunit A3"" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 64/159 (40%), Positives = 96/159 (60%)

Query:   134 AQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRK-PYMHHSRH 192
             + I GR+ LP  L T+  P++VNAKQYH I+RRR+ RAK   +NK+ R RK PY+H SRH
Sbjct:   163 SMIPGRVPLPAEL-TETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKVPYLHESRH 221

Query:   193 LHAMRRPRGCGGRFLNTK-----TRDGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTL 247
             +HA++RPRG GGRFLNTK     +   + R +E+    QQ+     ++ + + + E+  L
Sbjct:   222 VHALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDKLGQQV-----NRKTNMSRFEAHML 276

Query:   248 SSPKETNGSGPNLSGSEVTSMYSRGE-FGHFRINHLGPP 285
              + K+ + +    SGS++TS+    + FGH      G P
Sbjct:   277 QNNKDRSST---TSGSDITSVSDGADIFGHTEFQFSGFP 312

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;IGI;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2028150 NF-YA7 ""nuclear factor Y, subunit A7"" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 56/115 (48%), Positives = 74/115 (64%)

Query:   109 GFGQPMICAKYPYADQYY-GVFSAYGAQISG---RIM------LPLNLATDDGPIYVNAK 158
             G    M   +YPY D YY  +F+      +G   ++M      +PL     + P++VNAK
Sbjct:    48 GTTNSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAK 107

Query:   159 QYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRD 213
             QYHGI+RRR+SRA+   +NK+ + RKPY+H SRHLHA+RRPRGCGGRFLN K  D
Sbjct:   108 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED 162

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR|locus:2014375 NF-YA5 ""nuclear factor Y, subunit A5"" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 45/75 (60%), Positives = 59/75 (78%)

Query:   136 ISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHA 195
             +S R+ LP ++  ++ PI+VNAKQYH I+RRRK RAK   +NK+ + RKPY+H SRHLHA
Sbjct:   164 VSSRVPLPHHIQENE-PIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHA 222

Query:   196 MRRPRGCGGRFLNTK 210
             ++R RG GGRFLNTK
Sbjct:   223 LKRARGSGGRFLNTK 237

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0009785 "blue light signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0009790 "embryo development" evidence=IMP

GO:0010262 "somatic embryogenesis" evidence=IMP

GO:0048316 "seed development" evidence=IMP

TAIR|locus:2007953 NF-YA8 ""nuclear factor Y, subunit A8"" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 78/232 (33%), Positives = 115/232 (49%)

Query:    53 SMETSTEEAGQTLDKPSTTHFSFFP-GDV-KSSGDGQKLPPAISLQSALPENPGCFELGF 110
             S ++S +      D PS    SF    DV K   + Q+   AI   S+     G  ++  
Sbjct:    69 SAQSSNDVTSSGDDNPSR-QISFLAHSDVCKGFEETQRKRFAIKSGSS---TAGIADIHS 124

Query:   111 GQPMICAKYPYADQYYGVF--SAYGAQIS------GRIMLPLNLATDDGPIYVNAKQYHG 162
                     + YAD ++G    +AY  Q +       R+ LP +L  ++ P++VNAKQ+H 
Sbjct:   125 SPSKANFSFHYADPHFGGLMPAAYLPQATIWNPQMTRVPLPFDLIENE-PVFVNAKQFHA 183

Query:   163 IIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKK 222
             I+RRR+ RAK   +NK+ + RKPY+H SRH+HA++RPRG GGRFLNTK    S  T+ K+
Sbjct:   184 IMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES--TDPKQ 241

Query:   223 TCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEF 274
                 Q    TG+ S  VL     +      T       S S+  +++   EF
Sbjct:   242 DMPIQQQHATGNMSRFVLYQLQNSNDCDCSTTSRSDITSASDSVNLFGHSEF 293

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

TAIR|locus:2088791 NF-YA9 ""nuclear factor Y, subunit A9"" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 72/169 (42%), Positives = 90/169 (53%)

Query:   120 PYADQYY-GVFSAYGAQISG----------RIMLPLNLATDDGPIYVNAKQYHGIIRRRK 168
             PY D YY GV  AYG    G          R+ LP  +A +  P++VNAKQY  I+RRR+
Sbjct:   126 PYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE--PVFVNAKQYQAILRRRQ 183

Query:   169 SRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQL 228
             +RAKA LE K+ + RKPY+H SRH HAMRRPRG GGRF      + S R  E+K+     
Sbjct:   184 ARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKS----- 238

Query:   229 LQPTGSQSSEVLQSESGTLSSPKET-NGSGPNLSGSEV-TSMYSRGEFG 275
                    +  V QS S + S   E  NG      G E+ +S Y R E G
Sbjct:   239 -------NGHVTQSPSSSNSDQGEAWNGDYRTPQGDEMQSSAYKRREEG 280

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0009790 "embryo development" evidence=IMP

GO:0010262 "somatic embryogenesis" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0055046 "microgametogenesis" evidence=IMP

TAIR|locus:2088232 NF-YA6 ""nuclear factor Y, subunit A6"" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 58/164 (35%), Positives = 89/164 (54%)

Query:   119 YPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENK 178
             +PYA Q+          +  R+ LP N+  ++ PI+VNAKQY  I+RRR+ RAK   +NK
Sbjct:   140 FPYASQHTVQHPQIRGLVPSRMPLPHNIPENE-PIFVNAKQYQAILRRRERRAKLEAQNK 198

Query:   179 ITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQ-QLLQPTGSQSS 237
             + + RKPY+H SRHLHA++R RG GGRFLNTK    S  +      I   + + +  +  
Sbjct:   199 LIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSPPFLIPPHVFKNSPGKFR 258

Query:   238 EVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEFGHFRINH 281
             ++  S  G +SS   T+ S    + +++     +  F  +  NH
Sbjct:   259 QMDISRGGVVSSVSTTSCSDITGNNNDMFQQNPQFRFSGYPSNH 302

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0009790 "embryo development" evidence=IMP

GO:0010262 "somatic embryogenesis" evidence=IMP

GO:0048316 "seed development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	317
smart00521	62	smart00521, CBF, CCAAT-Binding transcription Facto	7e-34
pfam02045	57	pfam02045, CBFB_NFYA, CCAAT-binding transcription	1e-33
COG5224	248	COG5224, HAP2, CCAAT-binding factor, subunit B [Tr	8e-10

>gnl|CDD|128795 smart00521, CBF, CCAAT-Binding transcription Factor

 Score =  118 bits (297), Expect = 7e-34
 Identities = 41/62 (66%), Positives = 52/62 (83%)

Query: 148 TDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFL 207
            ++ P+YVNAKQYH I+RRR++RAK   + K+ ++RKPY+H SRHLHAMRRPRG GGRFL
Sbjct: 1   AEEEPVYVNAKQYHRILRRRQARAKLEAQGKLPKERKPYLHESRHLHAMRRPRGSGGRFL 60

Query: 208 NT 209
           NT
Sbjct: 61  NT 62

Length = 62

>gnl|CDD|190198 pfam02045, CBFB_NFYA, CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

 Score =  117 bits (296), Expect = 1e-33
 Identities = 41/57 (71%), Positives = 47/57 (82%)

Query: 150 DGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRF 206
           D PIYVNAKQYH I+RRR++RAK   ENK+ + RKPY+H SRH HAMRRPRG GGRF
Sbjct: 1   DEPIYVNAKQYHRILRRRQARAKLEAENKLIKSRKPYLHESRHKHAMRRPRGSGGRF 57

Length = 57

>gnl|CDD|227549 COG5224, HAP2, CCAAT-binding factor, subunit B [Transcription]

 Score = 57.9 bits (139), Expect = 8e-10
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 152 PIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFL---N 208
           P YVNAKQ + I +R   R    L++ ++  R  Y+H SRH HAM R R   GRFL    
Sbjct: 160 PDYVNAKQGNEISKRPGLRVY--LDDSVSAGRAFYLHESRHKHAMLRVRDPTGRFLTASE 217

Query: 209 TKTRDGSGRTEEKKTCIQQLLQPTGSQSS 237
               + +G T++    I Q   P+   S 
Sbjct: 218 IDPLNLTGNTQDSMI-IGQQTYPSHGSSG 245

Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	317
KOG1561	307	consensus CCAAT-binding factor, subunit B (HAP2) [	100.0
smart00521	62	CBF CCAAT-Binding transcription Factor.	100.0
PF02045	58	CBFB_NFYA: CCAAT-binding transcription factor (CBF	100.0
COG5224	248	HAP2 CCAAT-binding factor, subunit B [Transcriptio	99.76

>KOG1561 consensus CCAAT-binding factor, subunit B (HAP2) [Transcription]

Probab=100.00  E-value=1.2e-42  Score=328.22  Aligned_cols=104  Identities=49%  Similarity=0.780  Sum_probs=90.4

Q ss_pred             CCCccccc-cCCCCCCCc-cccc---ccCCCcc-------------cccccCCCCCCCCCceeecchhhhHHHHHHHHHH
Q 021081          110 FGQPMICA-KYPYADQYY-GVFS---AYGAQIS-------------GRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRA  171 (317)
Q Consensus       110 ~~~s~~~~-~~py~d~~y-G~~~---~yg~q~~-------------~r~~lP~~~~~~~~PvyVNaKQy~~IlrRR~~Ra  171 (317)
                      ..+..+++ .+||.+|+| |++.   +|++|..             .|++||.++. |++||||||||||||||||++||
T Consensus       126 ~~~~~~~~s~~~~~~p~~~g~~~~~~~y~~~~~~~~~~q~~g~~~~~r~pLP~~~~-e~ePl~VNaKQY~~IlrRRq~Ra  204 (307)
T KOG1561|consen  126 SMSPANNTSGNPITSPHYRGVLDMSGAYSGQPTNTASTQYSGPVPHDRTPLPQTDS-ETEPLYVNAKQYHRILRRRQARA  204 (307)
T ss_pred             ccccccccccCCCCCCcccceecccccccCCCCccccccccCCCCcCcccCCcccc-CCCceeEcHHHHHHHHHHHHHHh
Confidence            34444444 588999977 7887   8988742             4888997774 56999999999999999999999


Q ss_pred             HHHHhhhhhhcCCCCcccchhhhhhcCCCCCCCCccccccCCC
Q 021081          172 KAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDG  214 (317)
Q Consensus       172 k~e~~~kl~k~rk~YlhESRH~HAm~R~Rg~gGRFl~~k~~~~  214 (317)
                      |||+++||+|.||||||||||+|||||+||+||||||+||.+.
T Consensus       205 KlEa~~klik~RkpYLHESRH~HAmkR~RG~GGRFln~k~~~~  247 (307)
T KOG1561|consen  205 KLEATTKLIKARKPYLHESRHLHAMKRARGEGGRFLNTKEYHD  247 (307)
T ss_pred             hhhhcccchhhcCccccchhhHHHhhcccCCCCCCCchhhhhh
Confidence            9999999999999999999999999999999999999999744

>smart00521 CBF CCAAT-Binding transcription Factor

Probab=100.00  E-value=5e-37  Score=232.96  Aligned_cols=61  Identities=67%  Similarity=1.194  Sum_probs=59.5

Q ss_pred             CCCceeecchhhhHHHHHHHHHHHHHHhhhhhhcCCCCcccchhhhhhcCCCCCCCCcccc
Q 021081          149 DDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNT  209 (317)
Q Consensus       149 ~~~PvyVNaKQy~~IlrRR~~Rak~e~~~kl~k~rk~YlhESRH~HAm~R~Rg~gGRFl~~  209 (317)
                      +|+|||||||||++|||||++|||+|++++|++.||||||||||+|||+|+||+||||||+
T Consensus         2 ~~~piyVNaKQy~~IlrRR~~Rak~e~~~kl~~~rkpYlhESRH~HAm~R~Rg~gGRFl~~   62 (62)
T smart00521        2 EEEPVYVNAKQYHRILRRRQARAKLEAQGKLPKERKPYLHESRHLHAMRRPRGSGGRFLNT   62 (62)
T ss_pred             CCcceeEcHHHHHHHHHHHHHHHHHHHhcchhhccCCcccchhHHHHHccCcCCCCCCCCC
Confidence            5799999999999999999999999999999999999999999999999999999999985

>PF02045 CBFB_NFYA: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B; InterPro: IPR001289 The CCAAT-binding factor (CBFB/NF-YA) is a mammalian transcription factor that binds to a CCAAT motif in the promoters of a wide variety of genes, including type I collagen and albumin []

Probab=100.00  E-value=9.7e-35  Score=218.27  Aligned_cols=57  Identities=70%  Similarity=1.175  Sum_probs=56.1

Q ss_pred             CCceeecchhhhHHHHHHHHHHHHHHhhhh-hhcCCCCcccchhhhhhcCCCCCCCCc
Q 021081          150 DGPIYVNAKQYHGIIRRRKSRAKAVLENKI-TRKRKPYMHHSRHLHAMRRPRGCGGRF  206 (317)
Q Consensus       150 ~~PvyVNaKQy~~IlrRR~~Rak~e~~~kl-~k~rk~YlhESRH~HAm~R~Rg~gGRF  206 (317)
                      |+|||||||||++|||||++|||+|++++| ++.||||||||||+|||+|+||+||||
T Consensus         1 ~~piyVNaKQY~rIlrRR~~Rakle~~~k~~~~~rk~YlheSRH~HA~~R~Rg~gGRF   58 (58)
T PF02045_consen    1 EEPIYVNAKQYHRILRRRQARAKLEAEGKLSPKKRKPYLHESRHKHAMRRPRGPGGRF   58 (58)
T ss_pred             CCCeeECHHHHHHHHHHHHHHHHHHHhCCcchhhhHHHHHHHHHHHHHcCccCCCCCC
Confidence            589999999999999999999999999999 999999999999999999999999999

The factor is a heteromeric complex of A and B subunits, both of which are required for DNA-binding []. The subunits can interact in the absence of DNA-binding, conserved regions in each being important in mediating this interaction. The B subunit contains a region of similarity with the yeast protein HAP2 []. For the B subunit it has been suggested that the N-terminal portion of the conserved region is involved in subunit interaction and the C-terminal region involved in DNA-binding [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG5224 HAP2 CCAAT-binding factor, subunit B [Transcription]

Probab=99.76  E-value=1.4e-19  Score=165.92  Aligned_cols=63  Identities=41%  Similarity=0.497  Sum_probs=56.2

Q ss_pred             CCceeecchhhhHHHHHHHHHHHHHHhhhhhhcCCCCcccchhhhhhcCCCCCCCCccccccCCC
Q 021081          150 DGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDG  214 (317)
Q Consensus       150 ~~PvyVNaKQy~~IlrRR~~Rak~e~~~kl~k~rk~YlhESRH~HAm~R~Rg~gGRFl~~k~~~~  214 (317)
                      .+|.|||+|||++|++||-+|++++  .+|+-.|..|||||||+|||+|+|+++||||++.+.+.
T Consensus       158 fqp~Yvnakq~n~i~kr~~~r~~ld--~~~~~~r~~ylHesrhkham~r~r~ptgrfLtasEi~~  220 (248)
T COG5224         158 FQPDYVNAKQGNEISKRPGLRVYLD--DSVSAGRAFYLHESRHKHAMLRVRDPTGRFLTASEIDP  220 (248)
T ss_pred             cCcchhhhhhhhHHhcchhHHHHHH--HHhhhhhhhccccchhhhhhhcccCCCcceecHHhhhh
Confidence            5799999999999999999998855  56667777799999999999999999999998887754

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	317
4awl_A	78	The Nf-y Transcription Factor Is Structurally And F		5e-15
4g91_A	64	Ccaat-Binding Complex From Aspergillus Nidulans Len		8e-14

>pdb|4AWL|A Chain A, The Nf-y Transcription Factor Is Structurally And Functionally A Sequence Specific Histone Length = 78

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 150 DGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNT 209
           + P+YVNAKQYH I++RR++RAK   E KI ++R+ Y+H SRH HAM R RG GGRF + 
Sbjct: 2   EEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSP 61
Query: 210 KTRD 213
           K +D
Sbjct: 62  KEKD 65

>pdb|4G91|A Chain A, Ccaat-Binding Complex From Aspergillus Nidulans Length = 64

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Query: 150 DGPIYVNAKQYHGIIRRRKSRAKAVLENKITRK-RKPYMHHSRHLHAMRRPRGCGGRFL 207
           + P+YVNAKQ+H I++RR +R K   + ++T K RKPY+H SRH HAMRRPRG GGRFL
Sbjct: 2   ESPLYVNAKQFHRILKRRVARQKLEEQLRLTSKGRKPYLHESRHNHAMRRPRGPGGRFL 60

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	317
4g92_A	64	HAPB protein; transcription factor, nucleosome, mi	100.0

>4g92_A HAPB protein; transcription factor, nucleosome, minor groove binding, CCAA complex, histone fold motif, specific binding to the ccaat- nucleus; HET: DNA; 1.80A {Emericella nidulans} PDB: 4g91_A*

Probab=100.00  E-value=5.8e-37  Score=232.92  Aligned_cols=62  Identities=56%  Similarity=0.999  Sum_probs=58.5

Q ss_pred             CCceeecchhhhHHHHHHHHHHHHHHhhhhh-hcCCCCcccchhhhhhcCCCCCCCCcccccc
Q 021081          150 DGPIYVNAKQYHGIIRRRKSRAKAVLENKIT-RKRKPYMHHSRHLHAMRRPRGCGGRFLNTKT  211 (317)
Q Consensus       150 ~~PvyVNaKQy~~IlrRR~~Rak~e~~~kl~-k~rk~YlhESRH~HAm~R~Rg~gGRFl~~k~  211 (317)
                      |+|||||||||++|||||++|||+|++++|+ +.||||||||||+|||+|+||+||||||++|
T Consensus         2 eePiyVNaKQy~~IlrRR~~Rakle~~~kl~~~~rk~YlhESRH~HAm~R~Rg~gGRFl~~~e   64 (64)
T 4g92_A            2 ESPLYVNAKQFHRILKRRVARQKLEEQLRLTSKGRKPYLHESRHNHAMRRPRGPGGRFLTADE   64 (64)
T ss_dssp             -CCSCCCTTTHHHHHHHHHHHHHHHHHTTCCSSSCCSCSCHHHHHHHHHSCBCTTSCBCCCC-
T ss_pred             CCCeeECHHHHHHHHHHHHHHHHHHHhCCcccccccCcchhHHHHHHhcCCcCCCCccccCCC
Confidence            6899999999999999999999999999985 8999999999999999999999999999875

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00