Citrus Sinensis ID: 021320

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310----
Protein Sequence
MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccEEEccHHHHHHHHcHHHHHHEEEcccHHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHcccccccccccccccccc
Coil and Loop (DISEMBL)
MEQETEAYVSKAAALMACVLMTLSYVGilyaptlilrlpppaslkHYLIRRFICAAISSIISLIFSALilpirswetsnvLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWttdmnnsgglslGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIplllcggfkintIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLfpitrpdlyndrtnncrclhgycswn
Flexible Loop (DISEMBL)
MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRClhgycswn
Low Complexity Region (SEG)
MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLirrficaaissiislifsalilPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Disordered region (IsUnstruct)
*******YVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSW*
Disordered Region (DISOPRED)
**********KAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSW*
Disordered Region (DISEMBL)
*********SKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Disordered Region (DISPRO)
*****EAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	314	2.2.26 [Sep-21-2011]
Q8GW19	311	CAAX prenyl protease 2 OS	yes	no	0.990	1.0	0.624	1e-109
Q9U1H8	302	CAAX prenyl protease 2 OS	yes	no	0.831	0.864	0.299	3e-28
Q9Y256	329	CAAX prenyl protease 2 OS	yes	no	0.742	0.708	0.344	2e-26
P57791	329	CAAX prenyl protease 2 OS	yes	no	0.742	0.708	0.344	2e-26
O94448	271	Probable CAAX prenyl prot	yes	no	0.401	0.464	0.390	3e-22
A6H7A0	308	CAAX prenyl protease 2 OS	yes	no	0.675	0.688	0.298	1e-16
B0BMW8	308	CAAX prenyl protease 2 OS	no	no	0.713	0.727	0.293	2e-16
Q03530	315	CAAX prenyl protease 2 OS	yes	no	0.423	0.422	0.297	1e-08

>sp|Q8GW19|FACE2_ARATH CAAX prenyl protease 2 OS=Arabidopsis thaliana GN=FACE2 PE=2 SV=2

 Score =  396 bits (1018), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/314 (62%), Positives = 237/314 (75%), Gaps = 3/314 (0%)

Query: 1   MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSI 60
           M  + E+ +S + A+  CV M L YV ILY PT+ILRLP  +S   ++IRRFICAAI ++
Sbjct: 1   MATDGES-ISMSLAVATCVAMALFYVLILYVPTVILRLPSASSYTEFMIRRFICAAICTV 59

Query: 61  ISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNS 120
            SL+F+A ILPI+SWE S +LGVYGIR DH+WQ  V+PL LTSL+YAGS+VLK   LL S
Sbjct: 60  ASLVFTAFILPIKSWEASYILGVYGIRKDHLWQGVVYPLLLTSLVYAGSLVLKLFTLLES 119

Query: 121 WTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLL 180
           W    N  G  S   I+    ++ A +   ASN+  WRNF+VAP+TEELVFR+CMIPLLL
Sbjct: 120 WKE--NGGGCSSFNYIRSFFQTIPASVLTSASNVSVWRNFIVAPVTEELVFRSCMIPLLL 177

Query: 181 CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFL 240
           C GF+INT IFLCPV FSLAHLNH  E+Y   N S L+AS+IVGLQLGYTV+FG YASFL
Sbjct: 178 CAGFRINTAIFLCPVLFSLAHLNHFREMYIRHNRSYLRASLIVGLQLGYTVIFGAYASFL 237

Query: 241 FIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDR 300
           FIRTGHLAAPL AHIFCNYMGLPVL+A  +GLVS AF+ G+V F+ LLFP+T+P +YND 
Sbjct: 238 FIRTGHLAAPLFAHIFCNYMGLPVLYANGKGLVSAAFLGGVVGFVLLLFPLTKPLMYNDS 297

Query: 301 TNNCRCLHGYCSWN 314
           TN+C C  GYC WN
Sbjct: 298 TNDCPCWLGYCLWN 311

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. The substrate specificity is only partially overlaping with that of FACE1.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -

>sp|Q9U1H8|FACE2_DROME CAAX prenyl protease 2 OS=Drosophila melanogaster GN=Sras PE=2 SV=3

 Score =  125 bits (315), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 154/314 (49%), Gaps = 53/314 (16%)

Query: 3   QETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIIS 62
            E+   +  A ++  C ++ + YVG LY  +       P ++K    RRF   ++  + +
Sbjct: 19  HESLPQIPVATSVSCCFVLAVLYVGSLYIWSTKHNRDHPTTVK----RRFASVSMVMLAA 74

Query: 63  LIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVL-------KSL 115
             F                 + G+R + +WQA V P  LT L++ G + +       +S 
Sbjct: 75  PFFVYFFSSPELLSRVPFPKLLGLRLEGLWQAVVIPYSLTVLLFLGPIFVNMQNESVRSY 134

Query: 116 LLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACM 175
             L+ W            G    ++W                RN V+APL+EE VFRACM
Sbjct: 135 FDLDYWR-----------GSFGSIIWV---------------RNHVIAPLSEEFVFRACM 168

Query: 176 IPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSL---LKASMIVGL-QLGYTV 231
           +PL+L   F     +F+ P+FF +AHL+H+     A+  SL   L  ++++GL Q  YT 
Sbjct: 169 MPLIL-QSFSPLVAVFITPLFFGVAHLHHI-----AERLSLGVELSTALLIGLFQFIYTT 222

Query: 232 VFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFAR------NRGLVSVAFVAGMVAFL 285
           +FG+Y++FLF RTGH+ AP++ H FCN+MGLP L          R +  + ++AG V ++
Sbjct: 223 LFGFYSAFLFARTGHVMAPILVHAFCNHMGLPDLQDLWQQDLWRRVVAIILYLAGFVGWM 282

Query: 286 WLLFPITRPDLYND 299
           +L+   T P +Y++
Sbjct: 283 FLVPLATDPSIYDN 296

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|Q9Y256|FACE2_HUMAN CAAX prenyl protease 2 OS=Homo sapiens GN=RCE1 PE=1 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 140/258 (54%), Gaps = 25/258 (9%)

Query: 14  ALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSAL--ILP 71
           ++ +C+ +  SYVG LY     L    PA +K       + +++S +  L++  L  I P
Sbjct: 38  SVFSCLSLACSYVGSLYVWKSELPRDHPAVIKRRFTSVLVVSSLSPLCVLLWRELTGIQP 97

Query: 72  IRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGL 131
                 +++L + G R + ++ AA+ PL LT +++ G ++  S+        D+ +    
Sbjct: 98  -----GTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDLADG--- 145

Query: 132 SLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTI 189
               +K+VL     + +A     + W RN V+APLTEELVFRACM+P+L  C G  +   
Sbjct: 146 ----LKVVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCMG--LGPA 196

Query: 190 IFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAA 249
           +F CP+FF +AH +H++E    +  S+    +    Q  YT VFG Y +FLFIRTGHL  
Sbjct: 197 VFTCPLFFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIG 256

Query: 250 PLIAHIFCNYMGLPVLFA 267
           P++ H FCNYMG P + A
Sbjct: 257 PVLCHSFCNYMGFPAVCA 274

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. Seems to be able to process K-Ras, N-Ras, H-Ras, RAP1B and G-gamma-1.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|P57791|FACE2_MOUSE CAAX prenyl protease 2 OS=Mus musculus GN=Rce1 PE=2 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 139/258 (53%), Gaps = 25/258 (9%)

Query: 14  ALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSAL--ILP 71
           ++ +C  +  SYVG LY     L    PA +K       + +++S +  L++  L  I P
Sbjct: 38  SVFSCFSLACSYVGSLYVWKSELPRDHPAVIKRRSTSVLVVSSLSPLCVLLWRELTGIQP 97

Query: 72  IRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGL 131
                 +++L + G R + ++ AA+ PL LT +++ G ++  S+        D+ +    
Sbjct: 98  -----GTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDLTDG--- 145

Query: 132 SLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTI 189
               +K+VL     + +A     + W RN V+APLTEELVFRACM+P+L  C G  +   
Sbjct: 146 ----LKVVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPA 196

Query: 190 IFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAA 249
           +F CP+FF +AH +H++E    +  S+    +    Q  YT VFG Y +FLFIRTGHL  
Sbjct: 197 VFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFVSAAFQFSYTAVFGAYTAFLFIRTGHLIG 256

Query: 250 PLIAHIFCNYMGLPVLFA 267
           P++ H FCNYMG P + A
Sbjct: 257 PVLCHSFCNYMGFPAVCA 274

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. Seems to be able to process K-Ras, N-Ras, H-Ras, RAP1B and G-gamma-1.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|O94448|RCE1_SCHPO Probable CAAX prenyl protease 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1687.02 PE=3 SV=1

 Score =  106 bits (264), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 152 SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 211
           SN +AWRN ++ PL+EEL FR C++P+    G+    IIF+ P+ F +AH++H  E   A
Sbjct: 111 SNAIAWRNIIIGPLSEELTFRCCIVPICEAAGWSRLKIIFVAPLLFGMAHIHHTYEFLLA 170

Query: 212 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFAR--N 269
              + + A++   +Q  YT VFGWY + LF+ T  L    + H FCN MGLP L+ +  N
Sbjct: 171 YPNAYIAAALQTVVQFSYTTVFGWYTTHLFLSTHSLFPSFLVHAFCNSMGLPTLYGKIGN 230

Query: 270 RGLVSVAF 277
           R    + +
Sbjct: 231 RNQTRIYY 238

Proteolytically removes the C-terminal three residues of farnesylated proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|A6H7A0|FACE2_BOVIN CAAX prenyl protease 2 OS=Bos taurus GN=RCE1 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 46/258 (17%)

Query: 14  ALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSAL--ILP 71
           ++ +C+ +  SYVG LY     L    PA +K       + +++S +  L++  L  I P
Sbjct: 38  SVFSCLSLACSYVGSLYVWKSELPRDHPAVIKRRFTSVLVVSSLSPLCVLLWRELTGIQP 97

Query: 72  IRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGL 131
                 +++L + G R + ++ AA+ PL LT +++ G ++  S+        D+ +    
Sbjct: 98  -----GTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDLADG--- 145

Query: 132 SLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTI 189
               +K+VL     + +A     + W RN V+APLTEELVFRACM+P+L  C G  +   
Sbjct: 146 ----LKVVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPA 196

Query: 190 IFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAA 249
           +F CP+FF +AH +H+ E    +  S+                       +F+  GHL  
Sbjct: 197 VFTCPLFFGVAHFHHIFEQLRFRQSSV---------------------GSIFLSAGHLIG 235

Query: 250 PLIAHIFCNYMGLPVLFA 267
           P++ H FCNYMG P + A
Sbjct: 236 PVLCHSFCNYMGFPAVCA 253

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. Seems to be able to process K-Ras, N-Ras, H-Ras, RAP1B and G-gamma-1.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|B0BMW8|FACE2_RAT CAAX prenyl protease 2 OS=Rattus norvegicus GN=Rce1 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 130/276 (47%), Gaps = 52/276 (18%)

Query: 2   EQETEAYVSKAAAL------MACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICA 55
           + E+ A  S    L       +C  +  SYVG LY     L    PA +K       + +
Sbjct: 20  QPESAALSSPGPGLCCWVSVFSCFSLACSYVGSLYVWKSELPRDHPAVIKRRFTSVLVVS 79

Query: 56  AISSIISLIFSAL--ILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLK 113
           ++S +  L++  L  I P      +++L + G R + ++ AA+ PL LT +++ G +   
Sbjct: 80  SLSPLCVLLWRELTGIQP-----GTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPL--- 131

Query: 114 SLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFR 172
            + L      D+ +        +K+VL     + +A     + W RN V+APLTEELVFR
Sbjct: 132 -MQLCMDCPCDLTDG-------LKVVL---APRSWARRLTDMRWLRNQVIAPLTEELVFR 180

Query: 173 ACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTV 231
           ACM+P+L  C G  +   +F CP+FF +AH +H++E    +  S+               
Sbjct: 181 ACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSV--------------- 223

Query: 232 VFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA 267
                   +F+  GHL  P++ H FCNYMG P + A
Sbjct: 224 ------GSIFLSAGHLIGPVLCHSFCNYMGFPAVCA 253

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. Seems to be able to process K-Ras, N-Ras, H-Ras, RAP1B and G-gamma-1.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|Q03530|RCE1_YEAST CAAX prenyl protease 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RCE1 PE=1 SV=1

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 153 NILAWRNFVVAPLTEELVFRACMIP----LLLCGGFKINTIIFLCPVFFSLAHLNHLMEI 208
           NI ++RNF+ AP+TEE+ + + ++     L+         + +   +FF LAH +H  E 
Sbjct: 142 NIWSFRNFIFAPITEEIFYTSMLLTTYLNLIPHSQLSYQQLFWQPSLFFGLAHAHHAYEQ 201

Query: 209 YSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRT-GHLAAPLIAHIFCNYMGLPVLFA 267
               + + +   +    Q+ YT +FG    F+F+RT G+L   +I H  CN MG P    
Sbjct: 202 LQEGSMTTVSILLTTCFQILYTTLFGGLTKFVFVRTGGNLWCCIILHALCNIMGFPGPSR 261

Query: 268 RNRGLVSVAFVAGMVAFL 285
            N     V   AG ++ L
Sbjct: 262 LNLHFTVVDKKAGRISKL 279

Proteolytically removes the C-terminal three residues of farnesylated a-factor mating pheromone and of RAS.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	314
225440914	316	PREDICTED: CAAX prenyl protease 2 [Vitis	0.996	0.990	0.671	1e-123
449462982	313	PREDICTED: CAAX prenyl protease 2-like [	0.993	0.996	0.647	1e-115
356537093	489	PREDICTED: CAAX prenyl protease 2-like [	0.990	0.635	0.623	1e-114
302746511	327	farnesylated protein-converting enzyme 2	0.974	0.935	0.666	1e-110
79594437	311	CAAX prenyl protease 2 [Arabidopsis thal	0.990	1.0	0.624	1e-108
26453264	311	unknown protein [Arabidopsis thaliana] g	0.990	1.0	0.621	1e-107
224090659	270	predicted protein [Populus trichocarpa]	0.859	1.0	0.676	1e-101
297823435	311	prenyl-dependent CAAX protease [Arabidop	0.990	1.0	0.627	1e-101
302746505	281	farnesylated protein-converting enzyme 2	0.834	0.932	0.652	3e-88
255575655	257	protease U48 caax prenyl protease rce1,	0.786	0.961	0.617	3e-85

>gi|225440914|ref|XP_002282860.1| PREDICTED: CAAX prenyl protease 2 [Vitis vinifera] gi|297740101|emb|CBI30283.3| unnamed protein product [Vitis vinifera]

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/314 (67%), Positives = 258/314 (82%), Gaps = 1/314 (0%)

Query: 2   EQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSII 61
           E   E  V+K+ A+MAC  M L YV ILY+PT +LRLPPP+S K ++IRRFICAAISS++
Sbjct: 3   EDAGEGSVTKSVAMMACTAMALFYVAILYSPTWVLRLPPPSSFKQFMIRRFICAAISSLV 62

Query: 62  SLIFSALIL-PIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNS 120
           S++ SALIL P+RSWE S++  VYGIR DH+WQA VFPL LTSLMYAGS++LKSLL+++S
Sbjct: 63  SMLLSALILLPMRSWEVSHLFDVYGIRIDHIWQAMVFPLSLTSLMYAGSLLLKSLLIVSS 122

Query: 121 WTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLL 180
           W    N   G+++  +K V  ++   +F+ AS+ILAWRN+VVAP TEELVFRACMIPLLL
Sbjct: 123 WKQYKNQGRGIAINHVKNVPQNILNWVFSTASSILAWRNYVVAPFTEELVFRACMIPLLL 182

Query: 181 CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFL 240
           CGGFK  ++IFLCP+FFSLAHLNHL+E YS  N SLLKA M+ GLQLGYTV+FG YAS L
Sbjct: 183 CGGFKTYSVIFLCPIFFSLAHLNHLLEFYSKHNRSLLKAFMVAGLQLGYTVIFGSYASLL 242

Query: 241 FIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDR 300
           FIRTGH+ AP++AHIFCN+MGLPVLFA+ +G+VSVAFVAGMV FLWLLFP+T P LYNDR
Sbjct: 243 FIRTGHIVAPIVAHIFCNFMGLPVLFAQGKGMVSVAFVAGMVGFLWLLFPVTDPALYNDR 302

Query: 301 TNNCRCLHGYCSWN 314
           T+NCRC HGYC+W 
Sbjct: 303 TDNCRCWHGYCTWT 316

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462982|ref|XP_004149214.1| PREDICTED: CAAX prenyl protease 2-like [Cucumis sativus] gi|449500939|ref|XP_004161235.1| PREDICTED: CAAX prenyl protease 2-like [Cucumis sativus]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/312 (64%), Positives = 244/312 (78%)

Query: 3   QETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIIS 62
           +E +  +SKA A+ AC  M L YV ILYAP LILRLPPP SL+ Y+IRRF+CA IS+ +S
Sbjct: 2   EEEDCLISKAVAVTACTAMALFYVAILYAPALILRLPPPPSLQVYMIRRFLCAFISTAVS 61

Query: 63  LIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWT 122
           +   ALILPI+  E S +L  YG+RA+H+WQA +FPL LTS MY GSMVLK LLL++SW 
Sbjct: 62  VFVCALILPIKKMELSLLLAAYGVRANHIWQAVIFPLSLTSFMYVGSMVLKFLLLVDSWR 121

Query: 123 TDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCG 182
             MN+ G   L C +++   +     +  SNILAWRN+VVAPLTEELVFRACMIP+LL G
Sbjct: 122 EHMNHGGDSLLNCARLLWTRVLDWGLSTVSNILAWRNYVVAPLTEELVFRACMIPILLSG 181

Query: 183 GFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFI 242
           GFK  T+IFLCP+ FSLAHLNH ME YS QN +L KA M+VGLQLGYTVVFG YASFLF+
Sbjct: 182 GFKPTTVIFLCPILFSLAHLNHFMEYYSKQNNNLAKAVMVVGLQLGYTVVFGSYASFLFV 241

Query: 243 RTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTN 302
           RTGHL APL+AH+FCN+MGLP +F+R RG+VS+AF+ GMV FLWLLFP+T P L+N+RTN
Sbjct: 242 RTGHLLAPLVAHVFCNFMGLPAIFSRGRGVVSLAFLVGMVGFLWLLFPMTSPHLFNERTN 301

Query: 303 NCRCLHGYCSWN 314
           NCRC  GYCSWN
Sbjct: 302 NCRCWQGYCSWN 313

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537093|ref|XP_003537065.1| PREDICTED: CAAX prenyl protease 2-like [Glycine max]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/311 (62%), Positives = 242/311 (77%)

Query: 4   ETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISL 63
           E +  VS+  ALMAC+ M L YV ILYAPT+++RLPPP S K Y+IRRF+CA +SSI+SL
Sbjct: 171 EQDGVVSQPVALMACIAMALFYVAILYAPTVLIRLPPPPSFKAYMIRRFLCAVVSSILSL 230

Query: 64  IFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTT 123
             SALILP+++ E+ ++ GV+GIR DH+WQA V PL LTSLMY+GSM LK LLLL SW  
Sbjct: 231 FISALILPVQTKESRHMFGVFGIRRDHIWQAVVLPLCLTSLMYSGSMFLKCLLLLASWRQ 290

Query: 124 DMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGG 183
             N+   LS    K  L      + A++SNIL WRN+VVAPLTEELVFRACMIPLLLCGG
Sbjct: 291 HTNSGAALSFDSCKFALQRFLDWLSAISSNILVWRNYVVAPLTEELVFRACMIPLLLCGG 350

Query: 184 FKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIR 243
            K  +II LCP+FFSLAHLNH +EIY+ QN+ ++KA+M++GLQLGYTVVFG YASFLF+R
Sbjct: 351 LKTYSIILLCPIFFSLAHLNHFLEIYAKQNYRIVKAAMVIGLQLGYTVVFGSYASFLFVR 410

Query: 244 TGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNN 303
           TGHL APL+ HI+CN+MGLPVL+++  G+VSV F+ G + FLWLLFP+T P+LYNDR +N
Sbjct: 411 TGHLLAPLVVHIYCNFMGLPVLYSQRSGIVSVTFIIGFLGFLWLLFPMTGPELYNDRIDN 470

Query: 304 CRCLHGYCSWN 314
           C C   YC+W 
Sbjct: 471 CSCWQRYCTWR 481

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302746511|gb|ADL62870.1| farnesylated protein-converting enzyme 2 [Prunus persica]

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/306 (66%), Positives = 253/306 (82%)

Query: 9   VSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSAL 68
           VSKA A++AC  M L YV ILYAPTLILRLPPP S K+++IRRFICAAISS++S++ SAL
Sbjct: 22  VSKAVAVVACAAMALFYVAILYAPTLILRLPPPPSFKNFMIRRFICAAISSVVSVVVSAL 81

Query: 69  ILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNS 128
           +LP++S E S++LGVYGIR DH+WQA +FPL LT+LMY GS+VLKSLLL+++    MN  
Sbjct: 82  LLPMKSREASSLLGVYGIRMDHIWQAVIFPLTLTALMYGGSLVLKSLLLMSALREHMNFG 141

Query: 129 GGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINT 188
           GGLS   IK +   + A   ++AS++L WR +VVAPLTEELVFRACM+PLLLCGGF+ +T
Sbjct: 142 GGLSFNNIKNLSEEIVACSRSIASDVLVWRTYVVAPLTEELVFRACMLPLLLCGGFQKST 201

Query: 189 IIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLA 248
           +IFLCP+FFSLAHLNHL ++YS QN++L KA + +GLQLGYTVVFG YASFLFI+TGH  
Sbjct: 202 VIFLCPIFFSLAHLNHLKDVYSKQNYNLTKAVLAIGLQLGYTVVFGSYASFLFIQTGHFL 261

Query: 249 APLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLH 308
           APL+AH FCN+MGLPVL +R +G+VSVA VAG+V FLWLLFP+T P+LYNDRT+NC C  
Sbjct: 262 APLVAHAFCNFMGLPVLVSRGKGIVSVASVAGIVGFLWLLFPMTHPELYNDRTDNCVCWQ 321

Query: 309 GYCSWN 314
           GYCS N
Sbjct: 322 GYCSGN 327

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79594437|ref|NP_850262.2| CAAX prenyl protease 2 [Arabidopsis thaliana] gi|332278181|sp|Q8GW19.2|FACE2_ARATH RecName: Full=CAAX prenyl protease 2; AltName: Full=Farnesylated proteins-converting enzyme 2; Short=AtFACE-2; AltName: Full=Prenyl protein-specific endoprotease 2; AltName: Full=Protein RAS-CONVERTING ENZYME 1; Short=AtRCE1 gi|39837445|emb|CAD59227.1| farnesylated-proteins converting enzyme-2 [Arabidopsis thaliana] gi|330254136|gb|AEC09230.1| CAAX prenyl protease 2 [Arabidopsis thaliana]

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/314 (62%), Positives = 237/314 (75%), Gaps = 3/314 (0%)

Query: 1   MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSI 60
           M  + E+ +S + A+  CV M L YV ILY PT+ILRLP  +S   ++IRRFICAAI ++
Sbjct: 1   MATDGES-ISMSLAVATCVAMALFYVLILYVPTVILRLPSASSYTEFMIRRFICAAICTV 59

Query: 61  ISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNS 120
            SL+F+A ILPI+SWE S +LGVYGIR DH+WQ  V+PL LTSL+YAGS+VLK   LL S
Sbjct: 60  ASLVFTAFILPIKSWEASYILGVYGIRKDHLWQGVVYPLLLTSLVYAGSLVLKLFTLLES 119

Query: 121 WTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLL 180
           W    N  G  S   I+    ++ A +   ASN+  WRNF+VAP+TEELVFR+CMIPLLL
Sbjct: 120 WKE--NGGGCSSFNYIRSFFQTIPASVLTSASNVSVWRNFIVAPVTEELVFRSCMIPLLL 177

Query: 181 CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFL 240
           C GF+INT IFLCPV FSLAHLNH  E+Y   N S L+AS+IVGLQLGYTV+FG YASFL
Sbjct: 178 CAGFRINTAIFLCPVLFSLAHLNHFREMYIRHNRSYLRASLIVGLQLGYTVIFGAYASFL 237

Query: 241 FIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDR 300
           FIRTGHLAAPL AHIFCNYMGLPVL+A  +GLVS AF+ G+V F+ LLFP+T+P +YND 
Sbjct: 238 FIRTGHLAAPLFAHIFCNYMGLPVLYANGKGLVSAAFLGGVVGFVLLLFPLTKPLMYNDS 297

Query: 301 TNNCRCLHGYCSWN 314
           TN+C C  GYC WN
Sbjct: 298 TNDCPCWLGYCLWN 311

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26453264|dbj|BAC43705.1| unknown protein [Arabidopsis thaliana] gi|28950887|gb|AAO63367.1| At2g36305 [Arabidopsis thaliana]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/314 (62%), Positives = 236/314 (75%), Gaps = 3/314 (0%)

Query: 1   MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSI 60
           M  + E+ +S + A+  CV M L YV ILY PT+ILRLP  +S   ++IRRFICAAI ++
Sbjct: 1   MATDGES-ISMSLAVATCVAMALFYVLILYVPTVILRLPSASSYTEFMIRRFICAAICTV 59

Query: 61  ISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNS 120
            SL+F+A ILPI+SWE S +LGVYGIR DH+WQ  V+PL LTSL+YAGS+VLK   LL S
Sbjct: 60  ASLVFTAFILPIKSWEASYILGVYGIRKDHLWQGVVYPLLLTSLVYAGSLVLKLFTLLES 119

Query: 121 WTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLL 180
           W    N  G  S   I+    ++ A +   ASN+  WRNF+VAP+TEELVFR+CMIPLLL
Sbjct: 120 WKE--NGGGCSSFNYIRSFFQTIPASVLTSASNVSVWRNFIVAPVTEELVFRSCMIPLLL 177

Query: 181 CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFL 240
           C GF+INT IFLCPV FSLAHLNH  E+Y   N S L+AS+IVGLQLGYTV+FG YASFL
Sbjct: 178 CAGFRINTAIFLCPVLFSLAHLNHFREMYIRHNRSYLRASLIVGLQLGYTVIFGAYASFL 237

Query: 241 FIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDR 300
           FIRTGHLAAPL AHIFCN MGLPVL+A  +GLVS AF+ G+V F+ LLFP+T+P +YND 
Sbjct: 238 FIRTGHLAAPLFAHIFCNCMGLPVLYANGKGLVSAAFLGGVVGFVLLLFPLTKPLMYNDS 297

Query: 301 TNNCRCLHGYCSWN 314
           TN+C C  GYC WN
Sbjct: 298 TNDCPCWLGYCLWN 311

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090659|ref|XP_002309046.1| predicted protein [Populus trichocarpa] gi|222855022|gb|EEE92569.1| predicted protein [Populus trichocarpa]

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/272 (67%), Positives = 218/272 (80%), Gaps = 2/272 (0%)

Query: 1   MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSI 60
           MEQET   +SK  A++AC  M   YV ILYAPTLILRLP P+SLK ++IRRFICA ISS 
Sbjct: 1   MEQETG--LSKPVAVIACATMAFLYVAILYAPTLILRLPAPSSLKEFMIRRFICATISSF 58

Query: 61  ISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNS 120
           +SL+F A++LP+R  E + +  VYGIR DH+WQA VFPL LT LMYAGS+V KSLLL++S
Sbjct: 59  MSLVFCAILLPLRRREATYLFRVYGIRLDHLWQAVVFPLSLTCLMYAGSLVFKSLLLVDS 118

Query: 121 WTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLL 180
           W   M+   G+SL CIK +L +  A + + ASN+LAWRN+VVAPLTEELVFRACMIPLLL
Sbjct: 119 WKEHMHQGEGISLNCIKDILQNFLAGLSSTASNVLAWRNYVVAPLTEELVFRACMIPLLL 178

Query: 181 CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFL 240
           CGGF+I  +I LCP+ FSLAHLNH MEIY  QN+SLLKA M+VGLQLGYTV+FG YASFL
Sbjct: 179 CGGFEIYVVILLCPILFSLAHLNHWMEIYGRQNYSLLKAFMVVGLQLGYTVIFGSYASFL 238

Query: 241 FIRTGHLAAPLIAHIFCNYMGLPVLFARNRGL 272
           FIRTGHL APL+AHIFCN+MGLPVLF R  G+
Sbjct: 239 FIRTGHLVAPLVAHIFCNFMGLPVLFVRRTGM 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823435|ref|XP_002879600.1| prenyl-dependent CAAX protease [Arabidopsis lyrata subsp. lyrata] gi|297325439|gb|EFH55859.1| prenyl-dependent CAAX protease [Arabidopsis lyrata subsp. lyrata]

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/314 (62%), Positives = 240/314 (76%), Gaps = 3/314 (0%)

Query: 1   MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSI 60
           M  + E+ +S + A+ ACV M L YV ILYAPT+ILRLP  +S   ++IRRFICAAI ++
Sbjct: 1   MAIDGES-ISMSLAVAACVAMALFYVLILYAPTVILRLPSASSYTEFMIRRFICAAICTV 59

Query: 61  ISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNS 120
            SL+F+A ILPI+SWE S +LGVYGIR DH+WQ  V PL LTSL+YAGS+VLK LLLL  
Sbjct: 60  ASLVFTAFILPIKSWEASVILGVYGIRTDHLWQGVVCPLLLTSLVYAGSLVLKLLLLLE- 118

Query: 121 WTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLL 180
            +   N  G  S   I+    ++ A +   ASN+  WRNF+VAP+TEELVFRACMIPLLL
Sbjct: 119 -SLKENGGGCSSFDYIRSFFQTIPASVLTGASNVSVWRNFIVAPVTEELVFRACMIPLLL 177

Query: 181 CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFL 240
           C GF+I T IFLCPV FSLAHL+H  E+Y   N S L+AS+IVGLQLGYTV+FG YASFL
Sbjct: 178 CAGFRIYTAIFLCPVLFSLAHLSHFREMYIRHNRSYLRASLIVGLQLGYTVIFGAYASFL 237

Query: 241 FIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDR 300
           FIRTGHLAAPL AHIFCNYMGLPVL+A+ +GLVS AF+ G+V F+ LLFP+T+P +Y+DR
Sbjct: 238 FIRTGHLAAPLFAHIFCNYMGLPVLYAQGKGLVSAAFLGGVVGFVSLLFPLTKPLMYSDR 297

Query: 301 TNNCRCLHGYCSWN 314
           TN+C C  GYC WN
Sbjct: 298 TNDCPCWLGYCLWN 311

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302746505|gb|ADL62865.1| farnesylated protein-converting enzyme 2 [Prunus armeniaca]

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 171/262 (65%), Positives = 214/262 (81%)

Query: 9   VSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSAL 68
           VSKA A++AC  M L YV ILYAPTLILRLPPP S K+++IRRFICAAISS++S++ SAL
Sbjct: 20  VSKAVAVVACAAMALFYVAILYAPTLILRLPPPPSFKNFMIRRFICAAISSVVSVVVSAL 79

Query: 69  ILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNS 128
           +LP++S E S++LGVYGIR DH+WQA +FPL LT+LMY GS+VLKSLLL+++    MN  
Sbjct: 80  LLPMKSREASSLLGVYGIRMDHIWQAVIFPLTLTALMYGGSLVLKSLLLMSALREHMNFG 139

Query: 129 GGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINT 188
           GGLS   IK     + A   ++AS++L WR +VVAPLTEELVFRACM+PLLLCGGF+ +T
Sbjct: 140 GGLSFNNIKSFSKEIVACSRSIASDVLVWRTYVVAPLTEELVFRACMLPLLLCGGFQKST 199

Query: 189 IIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLA 248
           +IFLCP+FFSLAHLNHL ++YS QN++L KA + +GLQLGYTVVFG YASFLFI+TGH  
Sbjct: 200 VIFLCPIFFSLAHLNHLKDVYSKQNYNLTKAFLAIGLQLGYTVVFGSYASFLFIQTGHFL 259

Query: 249 APLIAHIFCNYMGLPVLFARNR 270
           AP +AH FCN+MGLPVL +R +
Sbjct: 260 APSVAHAFCNFMGLPVLVSRGK 281

Source: Prunus armeniaca

Species: Prunus armeniaca

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575655|ref|XP_002528727.1| protease U48 caax prenyl protease rce1, putative [Ricinus communis] gi|223531821|gb|EEF33639.1| protease U48 caax prenyl protease rce1, putative [Ricinus communis]

 Score =  321 bits (823), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 168/272 (61%), Positives = 196/272 (72%), Gaps = 25/272 (9%)

Query: 1   MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSI 60
           MEQET   +SK  A++AC  MT  YV ILYAPT+IL+LPPP+SLK ++IRRFICAAISSI
Sbjct: 1   MEQETG--LSKQVAVIACAAMTFYYVAILYAPTVILQLPPPSSLKEFMIRRFICAAISSI 58

Query: 61  ISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNS 120
           +S+I  A ILPI S E S + GVYGIR DH+WQA VFPL LTSLMYAGS  LK  LL++S
Sbjct: 59  VSVILCAFILPIPSMEASYLFGVYGIRLDHIWQAVVFPLSLTSLMYAGSFALKLFLLVDS 118

Query: 121 WTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLL 180
           W    N  GG+S   I ++  +    MF+ ASN+L WRN+VVAPLTEELVFRACMIPLLL
Sbjct: 119 WKEHAN--GGISFDSINLLFQNFITWMFSTASNVLVWRNYVVAPLTEELVFRACMIPLLL 176

Query: 181 CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFL 240
           CGG KI+ IIFLCPV FSLAHLNH MEIY   N+SLLKASM+V                 
Sbjct: 177 CGGLKISAIIFLCPVLFSLAHLNHWMEIYIRHNYSLLKASMVV----------------- 219

Query: 241 FIRTGHLAAPLIAHIFCNYMGLPVLFARNRGL 272
               GHL APL+AHIFCN+MGLPV+ AR  G+
Sbjct: 220 ----GHLLAPLVAHIFCNFMGLPVVLARRTGM 247

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	314
TAIR|locus:504956028	311	FACE2 "farnesylated protein-co	0.968	0.977	0.584	2.3e-94
FB|FBgn0029121	302	Sras "severas" [Drosophila mel	0.452	0.470	0.424	1.9e-35
ZFIN|ZDB-GENE-041008-116	321	rce1a "RCE1 homolog, prenyl pr	0.668	0.654	0.375	2e-33
UNIPROTKB|F1RUV3	329	RCE1 "Uncharacterized protein"	0.646	0.617	0.387	4.1e-33
UNIPROTKB|J9P1S2	488	RCE1 "Uncharacterized protein"	0.665	0.428	0.384	6.7e-33
UNIPROTKB|Q9Y256	329	RCE1 "CAAX prenyl protease 2"	0.646	0.617	0.383	8.5e-33
MGI|MGI:1336895	329	Rce1 "RCE1 homolog, prenyl pro	0.649	0.620	0.376	1.8e-32
UNIPROTKB|G3V8J7	329	Rce1 "Ras and a-factor-convert	0.649	0.620	0.376	2.9e-32
UNIPROTKB|E9PKA7	206	RCE1 "CAAX prenyl protease 2"	0.445	0.679	0.46	1e-29
ZFIN|ZDB-GENE-091204-277	305	rce1b "RCE1 homolog, prenyl pr	0.627	0.645	0.378	3.4e-29

TAIR|locus:504956028 FACE2 "farnesylated protein-converting enzyme 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
 Identities = 179/306 (58%), Positives = 214/306 (69%)

Query:     9 VSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLXXXXXXXXXXXXXXXXXXXX 68
             +S + A+  CV M L YV ILY PT+ILRLP  +S   ++                    
Sbjct:     8 ISMSLAVATCVAMALFYVLILYVPTVILRLPSASSYTEFMIRRFICAAICTVASLVFTAF 67

Query:    69 XXPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNS 128
               PI+SWE S +LGVYGIR DH+WQ  V+PL LTSL+YAGS+VLK   LL SW    N  
Sbjct:    68 ILPIKSWEASYILGVYGIRKDHLWQGVVYPLLLTSLVYAGSLVLKLFTLLESWKE--NGG 125

Query:   129 GGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINT 188
             G  S   I+    ++ A +   ASN+  WRNF+VAP+TEELVFR+CMIPLLLC GF+INT
Sbjct:   126 GCSSFNYIRSFFQTIPASVLTSASNVSVWRNFIVAPVTEELVFRSCMIPLLLCAGFRINT 185

Query:   189 IIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLA 248
              IFLCPV FSLAHLNH  E+Y   N S L+AS+IVGLQLGYTV+FG YASFLFIRTGHLA
Sbjct:   186 AIFLCPVLFSLAHLNHFREMYIRHNRSYLRASLIVGLQLGYTVIFGAYASFLFIRTGHLA 245

Query:   249 APLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLH 308
             APL AHIFCNYMGLPVL+A  +GLVS AF+ G+V F+ LLFP+T+P +YND TN+C C  
Sbjct:   246 APLFAHIFCNYMGLPVLYANGKGLVSAAFLGGVVGFVLLLFPLTKPLMYNDSTNDCPCWL 305

Query:   309 GYCSWN 314
             GYC WN
Sbjct:   306 GYCLWN 311

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0004175 "endopeptidase activity" evidence=IMP;IDA

GO:0016485 "protein processing" evidence=IDA

GO:0080120 "CAAX-box protein maturation" evidence=IGI

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0034613 "cellular protein localization" evidence=IGI

FB|FBgn0029121 Sras "severas" [Drosophila melanogaster (taxid:7227)]

 Score = 304 (112.1 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
 Identities = 65/153 (42%), Positives = 103/153 (67%)

Query:   155 LAW-RNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQN 213
             + W RN V+APL+EE VFRACM+PL+L   F     +F+ P+FF +AHL+H+ E  S   
Sbjct:   147 IIWVRNHVIAPLSEEFVFRACMMPLIL-QSFSPLVAVFITPLFFGVAHLHHIAERLSLG- 204

Query:   214 FSLLKASMIVGL-QLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVL---FARN 269
                L  ++++GL Q  YT +FG+Y++FLF RTGH+ AP++ H FCN+MGLP L   + ++
Sbjct:   205 -VELSTALLIGLFQFIYTTLFGFYSAFLFARTGHVMAPILVHAFCNHMGLPDLQDLWQQD 263

Query:   270 --RGLVSVA-FVAGMVAFLWLLFPITRPDLYND 299
               R +V++  ++AG V +++L+   T P +Y++
Sbjct:   264 LWRRVVAIILYLAGFVGWMFLVPLATDPSIYDN 296

GO:0004222 "metalloendopeptidase activity" evidence=ISS;NAS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0006508 "proteolysis" evidence=NAS

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-041008-116 rce1a "RCE1 homolog, prenyl protein peptidase (S. cerevisiae) a" [Danio rerio (taxid:7955)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 87/232 (37%), Positives = 128/232 (55%)

Query:    79 NVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKI 138
             ++  + GIR + +  A + PL LT +++ G ++   L +   W        G+ +  +  
Sbjct:    95 SLFALMGIRLEGLIPAIILPLLLTMVLFLGPLI--QLAMDCPW----GFIDGMKV-VVDP 147

Query:   139 VLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVF 196
               WSL         + + W RN VVAPLTEELVFRACM+P+L+ C G   +T IF CP+F
Sbjct:   148 CFWSL-------CLSDMRWLRNQVVAPLTEELVFRACMLPMLVPCAG--PSTAIFTCPLF 198

Query:   197 FSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIF 256
             F +AH +H++E+   +  ++    +    Q  YT VFG Y +F+FIRTGHL  P++ H F
Sbjct:   199 FGVAHFHHVIELLRFRQGTVSGIFLSAVFQFSYTAVFGAYTAFIFIRTGHLVGPVLCHSF 258

Query:   257 CNYMGLPVL---FARNRGLVSVAFVA-GMVAFLWLLFPITRPDLYNDRTNNC 304
             CNYMG P L      ++ L  + F   G+V FL L+FP+T P  Y   T  C
Sbjct:   259 CNYMGFPALNTALDHSQRLTILFFYGLGVVLFLLLIFPMTDPHFYGLPTPVC 310

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1RUV3 RCE1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 88/227 (38%), Positives = 130/227 (57%)

Query:    78 SNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIK 137
             +++L + G R + ++ AA+ PL LT +++ G ++  S          M+ S  L+ G +K
Sbjct:    99 TSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLS----------MDCSCDLADG-LK 147

Query:   138 IVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPV 195
             +VL     + +A     + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+
Sbjct:   148 VVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPL 202

Query:   196 FFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHI 255
             FF +AH +H+ E    +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H 
Sbjct:   203 FFGVAHFHHIFEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHS 262

Query:   256 FCNYMGLPVLFA-----RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 297
             FCNYMG P + A     + R L++  +  G+  FL LL P+T P LY
Sbjct:   263 FCNYMGFPAVCAALEHPQRRPLLA-GYALGVGLFLLLLQPLTDPKLY 308

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|J9P1S2 RCE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 90/234 (38%), Positives = 131/234 (55%)

Query:    71 PIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGG 130
             P+    TS +L + G R + ++ AA+ PL LT +++ G ++  S+        D+  + G
Sbjct:   252 PVAQPGTS-LLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDL--ADG 304

Query:   131 LSLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINT 188
             L     K+VL     + +A     + W RN V+APLTEELVFRACM+P+L  C G  +  
Sbjct:   305 L-----KVVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGP 354

Query:   189 IIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLA 248
              +F CP+FF +AH +H+ E    +  S+    +    Q  YT VFG Y +FLFIRTGHL 
Sbjct:   355 AVFTCPLFFGVAHFHHIFEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLI 414

Query:   249 APLIAHIFCNYMGLPVLFA-----RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 297
              P++ H FCNYMG P + A     + R L++  +  G+  FL LL P+T P LY
Sbjct:   415 GPVLCHSFCNYMGFPAVCAALEHPQRRPLLA-GYALGVGLFLLLLQPLTDPKLY 467

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q9Y256 RCE1 "CAAX prenyl protease 2" [Homo sapiens (taxid:9606)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 87/227 (38%), Positives = 130/227 (57%)

Query:    78 SNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIK 137
             +++L + G R + ++ AA+ PL LT +++ G ++  S+        D+  + GL     K
Sbjct:    99 TSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDL--ADGL-----K 147

Query:   138 IVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPV 195
             +VL     + +A     + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+
Sbjct:   148 VVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCMG--LGPAVFTCPL 202

Query:   196 FFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHI 255
             FF +AH +H++E    +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H 
Sbjct:   203 FFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHS 262

Query:   256 FCNYMGLPVLFA-----RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 297
             FCNYMG P + A     + R L++  +  G+  FL LL P+T P LY
Sbjct:   263 FCNYMGFPAVCAALEHPQRRPLLA-GYALGVGLFLLLLQPLTDPKLY 308

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071586 "CAAX-box protein processing" evidence=IMP

GO:0004197 "cysteine-type endopeptidase activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006508 "proteolysis" evidence=TAS

GO:0004222 "metalloendopeptidase activity" evidence=TAS

MGI|MGI:1336895 Rce1 "RCE1 homolog, prenyl protein peptidase (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 85/226 (37%), Positives = 127/226 (56%)

Query:    78 SNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIK 137
             +++L + G R + ++ AA+ PL LT +++ G ++  S+        D+ +  GL     K
Sbjct:    99 TSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDLTD--GL-----K 147

Query:   138 IVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPV 195
             +VL     + +A     + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+
Sbjct:   148 VVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPL 202

Query:   196 FFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHI 255
             FF +AH +H++E    +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H 
Sbjct:   203 FFGVAHFHHIIEQLRFRQSSVGSIFVSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHS 262

Query:   256 FCNYMGLPVLFAR----NRGLVSVAFVAGMVAFLWLLFPITRPDLY 297
             FCNYMG P + A      +  +   +  G+  FL LL P+T P LY
Sbjct:   263 FCNYMGFPAVCAALEHPQKWPLLAGYALGVGLFLLLLQPLTDPKLY 308

GO:0004197 "cysteine-type endopeptidase activity" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0071586 "CAAX-box protein processing" evidence=ISO

UNIPROTKB|G3V8J7 Rce1 "Ras and a-factor-converting enzyme 1 homolog (S. cerevisiae), isoform CRA_b" [Rattus norvegicus (taxid:10116)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 85/226 (37%), Positives = 126/226 (55%)

Query:    78 SNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIK 137
             +++L + G R + ++ AA+ PL LT +++ G +    + L      D+ +  GL     K
Sbjct:    99 TSLLTLMGFRLEGIFPAALLPLLLTMILFLGPL----MQLCMDCPCDLTD--GL-----K 147

Query:   138 IVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPV 195
             +VL     + +A     + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+
Sbjct:   148 VVL---APRSWARRLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPL 202

Query:   196 FFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHI 255
             FF +AH +H++E    +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H 
Sbjct:   203 FFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHS 262

Query:   256 FCNYMGLPVLFAR----NRGLVSVAFVAGMVAFLWLLFPITRPDLY 297
             FCNYMG P + A      +  +   +  G+  FL LL P+T P LY
Sbjct:   263 FCNYMGFPAVCAALEHPQKWPLLAGYALGVGLFLLLLQPLTDPKLY 308

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E9PKA7 RCE1 "CAAX prenyl protease 2" [Homo sapiens (taxid:9606)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 69/150 (46%), Positives = 93/150 (62%)

Query:   155 LAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQ 212
             + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H++E    +
Sbjct:    39 MRWLRNQVIAPLTEELVFRACMLPMLAPCMG--LGPAVFTCPLFFGVAHFHHIIEQLRFR 96

Query:   213 NFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA----- 267
               S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A     
Sbjct:    97 QSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHP 156

Query:   268 RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 297
             + R L++  +  G+  FL LL P+T P LY
Sbjct:   157 QRRPLLA-GYALGVGLFLLLLQPLTDPKLY 185

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-091204-277 rce1b "RCE1 homolog, prenyl protein peptidase (S. cerevisiae) b" [Danio rerio (taxid:7955)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 83/219 (37%), Positives = 117/219 (53%)

Query:    85 GIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLR 144
             GIR +    AAV PL LT +++ G +   ++        D+    GL+  C     WS +
Sbjct:    86 GIRLEGFVPAAVLPLTLTMVLFLGPLTQLAVESPRGLFHDVK--AGLN--CQS---WSKQ 138

Query:   145 AQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHL 202
              +        L W RN VVAPLTEE VFRAC+IP+L+ C G    + IF+ P+FF +AH 
Sbjct:   139 VKD-------LKWLRNHVVAPLTEEFVFRACIIPMLVPCTG--PTSAIFISPLFFGVAHF 189

Query:   203 NHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGL 262
             +H++E       ++    +    Q  YT VFG Y +F+FIRTGHL  P++ H FCN MG 
Sbjct:   190 HHIIEQLRFGQDTVFDILICAAFQFTYTSVFGVYTAFIFIRTGHLVGPVLCHSFCNRMGF 249

Query:   263 P----VLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLY 297
             P    VL    + L+ + +  G++ F  LLFP T P  Y
Sbjct:   250 PAIGSVLEHPQKSLILLFYQLGVLLFFILLFPFTDPTFY 288

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GW19	FACE2_ARATH	3, ., 4, ., 2, 2, ., -	0.6242	0.9904	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.22	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	314
pfam02517	93	pfam02517, Abi, CAAX protease self-immunity	4e-08

>gnl|CDD|217080 pfam02517, Abi, CAAX protease self-immunity

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 19/107 (17%)

Query: 154 ILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQN 213
           +L     ++AP+ EEL+FR  ++P L    F     I +  + F L HL +         
Sbjct: 6   LLLLLLALLAPIGEELLFRGFLLPRLR-KRFWPLLAILISSLLFGLLHLPNGP------- 57

Query: 214 FSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYM 260
                      L      + G    +L++RTG L A ++ H   N +
Sbjct: 58  -----------LAFLSAFLLGLVLGWLYLRTGSLWAAILLHALNNLL 93

Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity. Length = 93

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	314
KOG4130	291	consensus Prenyl protein protease [Posttranslation	100.0
PF02517	91	Abi: CAAX protease self-immunity; InterPro: IPR003	99.67
TIGR03008	222	pepcterm_CAAX CAAX prenyl protease-related protein	99.51
COG1266	226	Predicted metal-dependent membrane protease [Gener	99.45
COG4449	827	Predicted protease of the Abi (CAAX) family [Gener	95.47
PF13367	191	PrsW-protease: Protease prsW family	81.39

>KOG4130 consensus Prenyl protein protease [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.8e-63  Score=450.02  Aligned_cols=272  Identities=32%  Similarity=0.532  Sum_probs=236.3

Q ss_pred             cCCHHHHHHHHHHHHhheeEEeeccCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHhcccccchh---hhhhhcc
Q 021320            8 YVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSALILPIRSWET---SNVLGVY   84 (314)
Q Consensus         8 ~i~~~~a~~~~~~~a~sYV~sLY~~~~~~~r~~p~~~~~~i~rR~~~v~~~~~~s~~~~~~~l~~~~~~~---~~~l~~l   84 (314)
                      .+.+.+++..|+.++++||+|+|+|+..++|||||+|    |||+.+|++++..|+++++++.++.....   ......+
T Consensus         2 ~~~~~ssff~~lyla~sYv~ply~~s~~lnRdhP~tI----krRf~svlivss~~~flv~f~~s~ellgi~pg~~~p~ln   77 (291)
T KOG4130|consen    2 RMLQFSSFFVCLYLAISYVGPLYAWSQPLNRDHPRTI----KRRFQSVLIVSSSNPFLVPFLQSQELLGIIPGYYAPLLN   77 (291)
T ss_pred             CceeeeHHHHHHHHHHHheeeeeecCCccCCCCcHHH----HHHHHHHHHHHhhchHHHHHHhhhhhhccCcCccccccc
Confidence            3456678999999999999999999988888888777    78999999999999999999876433211   1345678


Q ss_pred             ccccchhhHHHHHHHHHHHHHhhhHHHHHHHHhhcccccCCCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 021320           85 GIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAP  164 (314)
Q Consensus        85 Gi~~~~~~~a~~~~l~Lt~iLf~GPl~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~w~~~~~~~~~l~~~~~~rn~vvaP  164 (314)
                      |++.+|++++.++|+.+|++||+||++|-.++..           +.+. .+..+||      ++++.|++++||.|+||
T Consensus        78 ~frfeg~~~avlk~lllt~tLflGPl~~v~m~~~-----------~~r~-~fil~~~------~~cf~nii~~RN~iiaP  139 (291)
T KOG4130|consen   78 GFRFEGFVKAVLKPLLLTLTLFLGPLLDVVMYHL-----------LNRK-SFILEDW------YHCFLNIIWFRNFIIAP  139 (291)
T ss_pred             ceeccchHHHHHHHHHHHHHHHhhhhhheeeecc-----------ccch-hccHHHH------HHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999999998664321           1121 2335677      88999999999999999


Q ss_pred             hHHHHHHHHhhHHHHhcCCCCCceehhhhHHHHHHhhccchHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021320          165 LTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRT  244 (314)
Q Consensus       165 i~EElvFRg~i~~~l~~~~~~~~~ailissllFglaH~~~~~e~~~~~~~~~~~a~~~~~~Q~~yt~lfG~~~~~ly~rT  244 (314)
                      ++||++||+||++..++..++..++++.+|++||+||.||++|+...+.++...+++++.||+.||++||+|.+++|+||
T Consensus       140 LtEElvfracmlp~~l~~~~s~l~avF~~PLfFGvAH~HHiyEqL~~g~~~~~~ilL~t~fQfsYTtlFG~yTaflF~rT  219 (291)
T KOG4130|consen  140 LTEELVFRACMLPTYLNLIQSSLQAVFWQPLFFGVAHAHHIYEQLQEGSMTTVSILLTTCFQFSYTTLFGGYTAFLFVRT  219 (291)
T ss_pred             chHHHHHHHHHHHHHHHhhhcchhhHHHhhHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999999999999986668999999999999999999999999977668888999999999999999999999999999


Q ss_pred             CCchHHHHHHHHhhhhchhhhhh------cchhHHHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 021320          245 GHLAAPLIAHIFCNYMGLPVLFA------RNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRT  301 (314)
Q Consensus       245 gsL~~~il~H~~~N~mg~P~~~~------~~~~~~~~~~v~G~v~f~~~L~~lt~~~~y~~~~  301 (314)
                      ||+|.||++|+|||.||+|++.+      +||....+.|.+|+..|+.++.+.|+|+.|++.+
T Consensus       220 ghl~~~iLvHAfCN~MGfP~l~~~~~~~~~rri~a~v~~llgv~~fllllgl~t~~~~~d~lp  282 (291)
T KOG4130|consen  220 GHLWCPILVHAFCNIMGFPNLHFTVVDKKARRISALVSYLLGVYFFLLLLGLITDPDTYDTLP  282 (291)
T ss_pred             CCchHHHHHHHHHhhcCChhHHHHHcCcccchHHHHHHHHHHHHHHHHHhccccCchhhccCC
Confidence            99999999999999999999976      2344446779999999999999999999998864

>PF02517 Abi: CAAX protease self-immunity; InterPro: IPR003675 Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide is removed by one of the CAAX prenyl proteases)

Probab=99.67  E-value=2.2e-16  Score=123.63  Aligned_cols=86  Identities=33%  Similarity=0.527  Sum_probs=75.6

Q ss_pred             HHHHHHhhhhhHHHHHHHHhhHHHHhcCCCCCceehhhhHHHHHHhhccchHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 021320          155 LAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFG  234 (314)
Q Consensus       155 ~~~rn~vvaPi~EElvFRg~i~~~l~~~~~~~~~ailissllFglaH~~~~~e~~~~~~~~~~~a~~~~~~Q~~yt~lfG  234 (314)
                      ..+...+++|+.||++|||.+++.+.+ +.++..++++++++||+.|....                   .|+.+++++|
T Consensus         6 ~~~~~~~~~~~~EEl~fRg~l~~~l~~-~~~~~~a~~is~~~f~~~H~~~~-------------------~~~~~~~~~g   65 (91)
T PF02517_consen    6 FFLVMILIAPIAEELFFRGFLFNRLRR-RFNPWFAILISSLLFALWHLPNG-------------------PQFIYAFLFG   65 (91)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHhhh-------------------HHHHHHHHHH
Confidence            456778899999999999999999854 45678999999999999998761                   2367888999


Q ss_pred             HHHHHHHHHhCCchHHHHHHHHhhhh
Q 021320          235 WYASFLFIRTGHLAAPLIAHIFCNYM  260 (314)
Q Consensus       235 ~~~~~ly~rTgsL~~~il~H~~~N~m  260 (314)
                      +.++++|.||||+|+++++|+.+|.+
T Consensus        66 ~~~~~~~~~t~sl~~~i~~H~~~n~~   91 (91)
T PF02517_consen   66 LLFGYLYLRTGSLWAAIIAHALWNLV   91 (91)
T ss_pred             HHHHHHHHHcCChHHHHHHHHHHHcC
Confidence            99999999999999999999999974

The family contains the Q03530 from SWISSPROT CAAX prenyl protease []. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding []. While these proteins are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity []. This family also includes lysostaphin resistance protein A [].; GO: 0016020 membrane

>TIGR03008 pepcterm_CAAX CAAX prenyl protease-related protein

Probab=99.51  E-value=5.4e-14  Score=129.12  Aligned_cols=81  Identities=25%  Similarity=0.367  Sum_probs=67.4

Q ss_pred             HHHHhhhhhHHHHHHHHhhHHHHhcCCC-------CCceehhhhHHHHHHhhccchHHHHHhhhhhHHHHHHHHHHHHHH
Q 021320          157 WRNFVVAPLTEELVFRACMIPLLLCGGF-------KINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGY  229 (314)
Q Consensus       157 ~rn~vvaPi~EElvFRg~i~~~l~~~~~-------~~~~ailissllFglaH~~~~~e~~~~~~~~~~~a~~~~~~Q~~y  229 (314)
                      ....+++|+.||++|||++++.+.++++       ..+.++++||++||+.|..                       ...
T Consensus       121 ~~~~l~vpi~EElfFRG~l~~~l~~~~f~~~~~~~~~~~a~lisSllFal~H~~-----------------------~~~  177 (222)
T TIGR03008       121 AGATLVVPVMEELFWRSFLLRYLQQSDFESVPGGRFHWPSFLAVTLLFGLEHHL-----------------------IVA  177 (222)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHHHHHH-----------------------HHH
Confidence            3457889999999999999999854222       2457899999999999952                       224


Q ss_pred             HHHHHHHHHHHHHHhCCchHHHHHHHHhhhh
Q 021320          230 TVVFGWYASFLFIRTGHLAAPLIAHIFCNYM  260 (314)
Q Consensus       230 t~lfG~~~~~ly~rTgsL~~~il~H~~~N~m  260 (314)
                      +++.|+..+++|.||||++.||++|+.+|..
T Consensus       178 ~~l~Gli~~~l~~~tgsL~~~I~~H~~~N~l  208 (222)
T TIGR03008       178 GLIAGLAYNLLLLRTGSIMACILAHAVTNGL  208 (222)
T ss_pred             HHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence            5677999999999999999999999999985

The CAAX prenyl protease, in eukaryotes, catalyzes three covalent modifications, including cleavage and acylation, at the C-terminus of certain proteins in a process connected to protein sorting. This family describes a bacterial protein family homologous to one domain of the CAAX-processing enzyme. Members of this protein family are found in genomes that carry a predicted protein sorting system, PEP-CTERM/exosortase, usually in the vicinity of the EpsH homolog that is the hallmark of the system. The function of this protein is unknown, but it may relate to protein motification.

>COG1266 Predicted metal-dependent membrane protease [General function prediction only]

Probab=99.45  E-value=2.9e-13  Score=120.27  Aligned_cols=89  Identities=28%  Similarity=0.459  Sum_probs=76.5

Q ss_pred             HHHHHHHhhhhhHHHHHHHHhhHHHHhcCCCCCceehhhhHHHHHHhhccchHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 021320          154 ILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVF  233 (314)
Q Consensus       154 ~~~~rn~vvaPi~EElvFRg~i~~~l~~~~~~~~~ailissllFglaH~~~~~e~~~~~~~~~~~a~~~~~~Q~~yt~lf  233 (314)
                      ...+-..+.+|+.||++|||.+++.+. ++.+.+.+++++|++||+.|.....      .          ...+.+++.+
T Consensus       124 ~~~~~~~i~~~l~EEl~fRg~l~~~l~-~~~~~~~a~iissllFal~H~~~~~------~----------~~~~~~~~~~  186 (226)
T COG1266         124 LFFLVLLILAPLAEELLFRGYLLGALA-RRFGPLLAIIISSLLFALLHLPNGL------L----------LLYFLLYFIA  186 (226)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHH-HhcCcHHHHHHHHHHHHHHHhcccc------h----------HHHHHHHHHH
Confidence            344567889999999999999999974 5777789999999999999987621      0          1356788899


Q ss_pred             HHHHHHHHHHhCCchHHHHHHHHhhh
Q 021320          234 GWYASFLFIRTGHLAAPLIAHIFCNY  259 (314)
Q Consensus       234 G~~~~~ly~rTgsL~~~il~H~~~N~  259 (314)
                      |...+++|.||||++.|+..|+.+|.
T Consensus       187 gli~~~~~~~t~~l~~~i~~H~~~N~  212 (226)
T COG1266         187 GLILGLLYLRTGSLWVPILLHALINL  212 (226)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence            99999999999999999999999997

>COG4449 Predicted protease of the Abi (CAAX) family [General function prediction only]

Probab=95.47  E-value=0.0062  Score=61.78  Aligned_cols=98  Identities=21%  Similarity=0.212  Sum_probs=70.0

Q ss_pred             HHHHHhhhhhHHHHHHHHhhHHHHhcCCCCCceehhhhH--HHHHHhhccchHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 021320          156 AWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCP--VFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVF  233 (314)
Q Consensus       156 ~~rn~vvaPi~EElvFRg~i~~~l~~~~~~~~~ailiss--llFglaH~~~~~e~~~~~~~~~~~a~~~~~~Q~~yt~lf  233 (314)
                      .+|.+++-.+.||++||..+++--.. +.-+|..+....  ++|-+-|..++..+| .+|.+.   ++.-.| +.-|.+.
T Consensus       712 iL~vIl~PAl~EElvFRvvLlP~P~E-~r~~W~tl~a~~~l~LfvLyHplnA~T~y-~rg~Pv---Ff~PiF-L~ltglL  785 (827)
T COG4449         712 ILTVILIPALGEELVFRVVLLPGPGE-GRRPWVTLGAATGLVLFVLYHPLNALTFY-PRGAPV---FFRPIF-LLLTGLL  785 (827)
T ss_pred             hhhheehhhccccceeEEEecCCCCc-cccchHhHHHHHHHHHHHHhhhhhhhhcc-ccCCcc---eeccHH-HHHHHHH
Confidence            35777888899999999999886542 323455554443  489999998887776 444442   111112 4457788


Q ss_pred             HHHHHHHHHHhCCchHHHHHHHHhhh
Q 021320          234 GWYASFLFIRTGHLAAPLIAHIFCNY  259 (314)
Q Consensus       234 G~~~~~ly~rTgsL~~~il~H~~~N~  259 (314)
                      |+-.+..|.-|||+|+.+++|-..=.
T Consensus       786 GL~Ctvty~vT~SlW~iV~lHW~vVv  811 (827)
T COG4449         786 GLGCTVTYRVTGSLWPIVLLHWAVVV  811 (827)
T ss_pred             hhhhhhhHHhccchHHHHHHHHHHHH
Confidence            99999999999999999999976433

>PF13367 PrsW-protease: Protease prsW family

Probab=81.39  E-value=22  Score=31.33  Aligned_cols=108  Identities=18%  Similarity=0.172  Sum_probs=60.7

Q ss_pred             HHHHHhhhhhHHHHHHHHhhHHHH--hcCCC-CCceehh---hhHHHHHHhhccchHHHHHhh-------h--hhHHHHH
Q 021320          156 AWRNFVVAPLTEELVFRACMIPLL--LCGGF-KINTIIF---LCPVFFSLAHLNHLMEIYSAQ-------N--FSLLKAS  220 (314)
Q Consensus       156 ~~rn~vvaPi~EElvFRg~i~~~l--~~~~~-~~~~ail---issllFglaH~~~~~e~~~~~-------~--~~~~~a~  220 (314)
                      .+...+.+|++||.+==-.++-..  .++++ ++.-.++   .+++=|++..--...-....+       +  ..+.+.+
T Consensus        43 ~~~~~~~a~~~EE~~K~l~v~~~~~~~~~~~~~~~d~~~~g~a~GlGFa~~En~~Y~~~~~~~~~~~~~~~~~~~~~R~~  122 (191)
T PF13367_consen   43 LWGAFLIAPLVEEFAKLLPVLLLLLLRRRRFDEPMDGLVYGAAVGLGFAIMENILYILNAAEDNGGSVQGGLSTAILRGI  122 (191)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHhhHhhcCcchhhhhhhHHHHHHHHHHHHHHHHHhhhcccchhhhHHHHHHHHHH
Confidence            346678899999986322222222  12222 3333332   466777766543322111000       0  1123444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh---------CCchHHHHHHHHhhhhchh
Q 021320          221 MIVGLQLGYTVVFGWYASFLFIRT---------GHLAAPLIAHIFCNYMGLP  263 (314)
Q Consensus       221 ~~~~~Q~~yt~lfG~~~~~ly~rT---------gsL~~~il~H~~~N~mg~P  263 (314)
                      ........+|.+.|...++...+.         +-+..+++.|+++|.....
T Consensus       123 ~~~~~H~~~t~i~g~~l~~~~~~~~~~~~~~~~~~~~~a~~lH~~~N~~~~~  174 (191)
T PF13367_consen  123 TSVPGHALFTAIFGYGLGLAKRRRKRGFRLALLLGFLLAVLLHGLWNFPLSL  174 (191)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            555677889999998777766221         2467899999999996654

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00