Citrus Sinensis ID: 021482

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLICH
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHccccccccEEEEEEccccccHHHHHHHHHHHHccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHccHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHHHccccEEEEEcccccccccccEEEccccccccccccccccccHHHHccccccccccccEEEEccccccccHHHHHHHHHHcHHHHccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHccEEEEEccccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHccccHHEEEEEEEcccccccHHHHHHHHHHHccccccEEEEEEcccccccHHHccccccHHHHHHHHHHHHcccccEEccccccccccccccccccccHHHHHHccHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHccccEEEEEEEccccccccccEEEEcccccccccHHHHHHHHHHHHHHccccccccccEEEEccccccccHHHHHHHHHHHHHHHccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mrpirlpepptqtmgvpeifAAGAYSVIRRAVVigngypgsenQCVGLVRalglsdkhvlyrvtrprgginewlhwlpvsvHKKLEYVIRQICGYSrllsaargekpvchplenggnvglssVLEADVRQIVTMARETyekdgpllvvasgrdTISIASSIKrlasdnvfvvqiqhprvhlnrfdlvitprhdyypltpegqekIPQFLRrwitpceppdghvvlttgALHQIDSAALRSAASAwheefaplpkplvvvnvggptgccrygSDLAKQLTAHLLNVLVSCGSirisfsmrtPEKVLQQLLICH
Flexible Loop (DISEMBL)
mrpirlpepptqtmgvpEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPlenggnvglssvlEADVRQIVTMAretyekdgpllvVASGRDTISIASSIKRLASDNVFVVQIQHprvhlnrfdlvitPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLICH
Low Complexity Region (SEG)
MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLICH
Disordered region (IsUnstruct)
***************VPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLIC*
Disordered Region (DISOPRED)
*********************AGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLIC*
Disordered Region (DISEMBL)
MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLICH
Disordered Region (DISPRO)
****RLPEP*TQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLICH
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLICH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
Q9ZE28	354	Uncharacterized protein R	yes	no	0.528	0.466	0.298	8e-08

>sp|Q9ZE28|Y120_RICPR Uncharacterized protein RP120 OS=Rickettsia prowazekii (strain Madrid E) GN=RP120 PE=4 SV=1

 Score = 58.2 bits (139), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 19/184 (10%)

Query: 134 MARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHD 193
           + ++  +K  P +++ +GR T  +A  +K+   +N+ +VQI  P +  N FD +I P HD
Sbjct: 57  LLQDIIDKLPPDMIITAGRRTAVLAFYLKK-KFENIKLVQIMQPNLPYNIFDAIILPYHD 115

Query: 194 YYPLTPEGQEKIPQFLRRWITPCEPPD-----------GHVVLTTGALHQIDSAALRSAA 242
           Y  L   G  KI    +   + C+  +             ++   GAL+ I   A  SAA
Sbjct: 116 YRDLLYCGPAKI--LSKNIKSHCKVLNYSSRQHDIEKMMKIIPINGALNNI--TAKFSAA 171

Query: 243 SAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSI--RISFSMRT 300
           S   ++  P  K    V +GG      +  D+A  L + LLN + S  +I   ISFS RT
Sbjct: 172 SLELQKHYPHLKQFTAVIIGGNNKRFSFNEDIA-ILFSSLLNKIYSNQAIPFFISFSRRT 230

Query: 301 PEKV 304
           P+ V
Sbjct: 231 PQIV 234


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.138    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,661,911
Number of Sequences: 539616
Number of extensions: 5425369
Number of successful extensions: 11173
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11172
Number of HSP's gapped (non-prelim): 2
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Rickettsia prowazekii (strain Madrid E) (taxid: 272947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
255565697	419	conserved hypothetical protein [Ricinus	0.955	0.711	0.779	1e-135
224132286	424	predicted protein [Populus trichocarpa]	0.971	0.714	0.759	1e-131
225464890	420	PREDICTED: uncharacterized protein RP120	0.983	0.730	0.769	1e-129
224104897	424	predicted protein [Populus trichocarpa]	0.971	0.714	0.746	1e-129
18420465	427	uncharacterized protein [Arabidopsis tha	0.974	0.711	0.715	1e-128
297812363	427	hypothetical protein ARALYDRAFT_910225 [	0.974	0.711	0.715	1e-128
449443460	425	PREDICTED: uncharacterized protein RP120	0.974	0.715	0.730	1e-127
356541390	492	PREDICTED: uncharacterized protein RP120	0.974	0.617	0.699	1e-126
356544742	427	PREDICTED: uncharacterized protein RP120	0.974	0.711	0.689	1e-123
449462938	423	PREDICTED: uncharacterized protein RP120	0.974	0.718	0.676	1e-117

>gi|255565697|ref|XP_002523838.1| conserved hypothetical protein [Ricinus communis] gi|223536926|gb|EEF38564.1| conserved hypothetical protein [Ricinus communis]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 237/304 (77%), Positives = 265/304 (87%), Gaps = 6/304 (1%)

Query: 1   MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVL 60
           MRPIRLPEPP+ TMGVPEIF  GA SVIRRAVVIGNG+PGSENQ +GLVRALGLSD HVL
Sbjct: 1   MRPIRLPEPPSPTMGVPEIFETGANSVIRRAVVIGNGFPGSENQSLGLVRALGLSDNHVL 60

Query: 61  YRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGL 120
           YRVTRPRGG+N+WLHWLPVS+HKKL+Y++RQ   Y       R +    H + NG  VGL
Sbjct: 61  YRVTRPRGGVNDWLHWLPVSLHKKLDYIVRQFYYY-----WTRKKLAPSHSV-NGAAVGL 114

Query: 121 SSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVH 180
           S+VLEAD++ IV MAR+++EKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPR  
Sbjct: 115 STVLEADLKHIVNMARDSFEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRSS 174

Query: 181 LNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRS 240
           LNRFDLVITP HDYYPLTP+ QE++P+FLR+WITP EPPDGHVVLT GALHQID AALR 
Sbjct: 175 LNRFDLVITPHHDYYPLTPQAQEQVPRFLRKWITPREPPDGHVVLTVGALHQIDFAALRG 234

Query: 241 AASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRT 300
           AASAWH+EFAPLPKPL+VVN+GGPTGCCRYG+DLAKQLTA LL+VL  CGS+RISFS RT
Sbjct: 235 AASAWHDEFAPLPKPLLVVNIGGPTGCCRYGTDLAKQLTASLLSVLDGCGSVRISFSNRT 294

Query: 301 PEKV 304
           PEKV
Sbjct: 295 PEKV 298

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132286|ref|XP_002328231.1| predicted protein [Populus trichocarpa] gi|222837746|gb|EEE76111.1| predicted protein [Populus trichocarpa]

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/304 (75%), Positives = 264/304 (86%), Gaps = 1/304 (0%)

Query: 1   MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVL 60
           M+PIRLPEPP+ TMGVPEIF  GAYSVIRRAVVIGNG+PGSENQ +GLVRALGL DKHVL
Sbjct: 1   MKPIRLPEPPSPTMGVPEIFENGAYSVIRRAVVIGNGFPGSENQSLGLVRALGLYDKHVL 60

Query: 61  YRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGL 120
           +RVTRPRGGINEWLHWLP+S+HK L Y+IR+I  Y RL+ A+R  +    P E G NVGL
Sbjct: 61  FRVTRPRGGINEWLHWLPISLHKLLYYIIRRIYSYLRLI-ASRRRRLSPLPSEKGRNVGL 119

Query: 121 SSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVH 180
           SS+LEAD ++IV MARE+YEKDGPLLVVASGRDTIS+ASSIKRLAS+ VF+VQIQHPR  
Sbjct: 120 SSILEADSKRIVNMARESYEKDGPLLVVASGRDTISVASSIKRLASEKVFLVQIQHPRSD 179

Query: 181 LNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRS 240
           L+RFDLV+TP HDYYPLTP+ QE++P+FL+RWITP EPPD HVVLT GALHQID AALRS
Sbjct: 180 LSRFDLVVTPHHDYYPLTPQAQEQVPRFLQRWITPREPPDEHVVLTVGALHQIDFAALRS 239

Query: 241 AASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRT 300
           AAS WH+EFAPLPKPL+VVN+GGP+  CRYG+DLAKQL   + NVLVSCGS+RI FS RT
Sbjct: 240 AASTWHDEFAPLPKPLLVVNIGGPSCHCRYGTDLAKQLCTFVTNVLVSCGSVRIFFSNRT 299

Query: 301 PEKV 304
           PEKV
Sbjct: 300 PEKV 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464890|ref|XP_002273670.1| PREDICTED: uncharacterized protein RP120 [Vitis vinifera]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/312 (76%), Positives = 272/312 (87%), Gaps = 5/312 (1%)

Query: 1   MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVL 60
           MRPIRLPEPP  ++GVPEIF  GAYSVIRRAV+IGNG+PGSENQ +GLVRALGL+DK VL
Sbjct: 1   MRPIRLPEPPGPSLGVPEIFEGGAYSVIRRAVIIGNGFPGSENQSIGLVRALGLADKQVL 60

Query: 61  YRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGL 120
           YRVTRPRGGINEWLHWLPVS+HKKL+Y+IRQ+     LL   R  K +  P+ENGG+VGL
Sbjct: 61  YRVTRPRGGINEWLHWLPVSLHKKLDYIIRQL-----LLLTVRRRKLMPVPMENGGSVGL 115

Query: 121 SSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVH 180
           SSVLEADV+QIVTMA ETYEK+GPLLVVASGRDTISIASSIK+LA++NVFVVQIQHPR  
Sbjct: 116 SSVLEADVKQIVTMASETYEKEGPLLVVASGRDTISIASSIKKLAAENVFVVQIQHPRSQ 175

Query: 181 LNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRS 240
           L+RFDLV+TP HDYYPLTP+ Q++IP+ LRRWITP EPPD HVVLT GALHQIDS+ALRS
Sbjct: 176 LHRFDLVVTPHHDYYPLTPQAQKQIPRCLRRWITPLEPPDRHVVLTVGALHQIDSSALRS 235

Query: 241 AASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRT 300
           AASAWH+EFAPLPKPL+VVN+GGPT  CRYG DLAKQL+A L  VLVSCGS+RISFS RT
Sbjct: 236 AASAWHDEFAPLPKPLLVVNIGGPTSHCRYGVDLAKQLSACLHGVLVSCGSVRISFSERT 295

Query: 301 PEKVLQQLLICH 312
           PEKV   ++  H
Sbjct: 296 PEKVSNVIVKEH 307

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104897|ref|XP_002313610.1| predicted protein [Populus trichocarpa] gi|222850018|gb|EEE87565.1| predicted protein [Populus trichocarpa]

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/304 (74%), Positives = 261/304 (85%), Gaps = 1/304 (0%)

Query: 1   MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVL 60
           MRPIRLPEPP+ T+GVPEIF  G YSVIRRAVVIGNG PGSENQ +GL+ ALGL+D HVL
Sbjct: 1   MRPIRLPEPPSPTLGVPEIFENGGYSVIRRAVVIGNGIPGSENQSLGLIHALGLADNHVL 60

Query: 61  YRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGL 120
           YRVTRP GGINEWL WLPVS+HK L ++I +I  YSR +  +RG+K    P ENGG+VGL
Sbjct: 61  YRVTRPSGGINEWLRWLPVSLHKILYHIIMRIYSYSRFI-VSRGKKLAPLPSENGGSVGL 119

Query: 121 SSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVH 180
           SS+LEAD +QIV MARE+YEKDGPLLVVASGRDTISIASSIKRLAS+ VF+VQIQHPR  
Sbjct: 120 SSILEADSKQIVNMARESYEKDGPLLVVASGRDTISIASSIKRLASEKVFLVQIQHPRSD 179

Query: 181 LNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRS 240
           L+RFDLV+TPRHDYY LTP+ QE+IP+ +R+WITP E PD HVVLT GALHQID AAL S
Sbjct: 180 LSRFDLVVTPRHDYYALTPQAQEQIPRIIRKWITPHETPDQHVVLTVGALHQIDFAALHS 239

Query: 241 AASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRT 300
           AAS WH+EFAPLPKPL+VVN+GGPT  CRYG++LA+QL+A L NVLVSCGS+RISFS RT
Sbjct: 240 AASTWHDEFAPLPKPLLVVNIGGPTCRCRYGTELAQQLSAFLTNVLVSCGSVRISFSNRT 299

Query: 301 PEKV 304
           P+KV
Sbjct: 300 PKKV 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420465|ref|NP_568417.1| uncharacterized protein [Arabidopsis thaliana] gi|16649091|gb|AAL24397.1| Unknown protein [Arabidopsis thaliana] gi|22136260|gb|AAM91208.1| unknown protein [Arabidopsis thaliana] gi|195183710|dbj|BAG66280.1| mitochondrial fission protein [Arabidopsis thaliana] gi|332005632|gb|AED93015.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/306 (71%), Positives = 262/306 (85%), Gaps = 2/306 (0%)

Query: 1   MRPIRLPEPPTQTMGVPEIFA-AGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHV 59
           MRPI LP+PP+ + GVP+IF   G+++V+RRAVVIGNG+PGSENQC+GLVRALGLSD H+
Sbjct: 1   MRPILLPDPPSLSTGVPDIFEQGGSHNVVRRAVVIGNGFPGSENQCIGLVRALGLSDNHL 60

Query: 60  LYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCH-PLENGGNV 118
           LYRVTRP+GG+NEWLHWLPV  HKKL++++R I  YSRL+  ++  K +   P ENGGNV
Sbjct: 61  LYRVTRPKGGLNEWLHWLPVGFHKKLDFILRHIYLYSRLMLGSKQSKYISSVPSENGGNV 120

Query: 119 GLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPR 178
           GL+S+LEADV+ IV +AR+TYEKDGPL+V+A GRDTISIASSI+RLAS+NVFVVQIQHPR
Sbjct: 121 GLASILEADVKGIVNLARQTYEKDGPLIVIACGRDTISIASSIRRLASENVFVVQIQHPR 180

Query: 179 VHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAAL 238
            HLNRFD+VITPRHDYYPLT E QE++P+F+R WITP EPP  HVVLTTGALHQID A+L
Sbjct: 181 SHLNRFDMVITPRHDYYPLTLEAQEQVPRFMRSWITPREPPQDHVVLTTGALHQIDYASL 240

Query: 239 RSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSM 298
           R AASAWH+EFA LPKPLVVVN+G P   CRYG+DLAKQLT  LLNVL +CGS+RI+ S 
Sbjct: 241 RKAASAWHDEFAALPKPLVVVNIGWPRSNCRYGADLAKQLTDSLLNVLATCGSVRITLSY 300

Query: 299 RTPEKV 304
           +TP KV
Sbjct: 301 KTPAKV 306

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812363|ref|XP_002874065.1| hypothetical protein ARALYDRAFT_910225 [Arabidopsis lyrata subsp. lyrata] gi|297319902|gb|EFH50324.1| hypothetical protein ARALYDRAFT_910225 [Arabidopsis lyrata subsp. lyrata]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/306 (71%), Positives = 261/306 (85%), Gaps = 2/306 (0%)

Query: 1   MRPIRLPEPPTQTMGVPEIFA-AGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHV 59
           MRPI LP+PP+ + GVP+IF   GA +V+RRAVVIGNG+PGSENQC+GLVRALGL++ H+
Sbjct: 1   MRPILLPDPPSLSTGVPDIFEQGGAQNVVRRAVVIGNGFPGSENQCIGLVRALGLANNHL 60

Query: 60  LYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCH-PLENGGNV 118
           LYRVTRP+GGINEWLHWLPV  HKKL++++R I  YSRL+  ++  K +   P ENGGNV
Sbjct: 61  LYRVTRPKGGINEWLHWLPVGFHKKLDFILRHIYLYSRLMLGSKQSKYISSVPSENGGNV 120

Query: 119 GLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPR 178
           GL+S+LEADV+ IV MAR+TYEKDGPL+V+A GRDTISIASSI+RLAS+NVFVVQI+HPR
Sbjct: 121 GLASILEADVKSIVNMARQTYEKDGPLVVIACGRDTISIASSIRRLASENVFVVQIKHPR 180

Query: 179 VHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAAL 238
            HLNRFD+VITPRHDYYPLT E QE++P+F+R WITP EPP  HVVLTTGALHQID A+L
Sbjct: 181 SHLNRFDMVITPRHDYYPLTLEAQEQVPRFMRSWITPREPPQDHVVLTTGALHQIDYASL 240

Query: 239 RSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSM 298
           R AASAWH+EFA LPKPLVVVN+G P   CRYG+DLAKQLT  LLNVL +CGS+RI+ S 
Sbjct: 241 RKAASAWHDEFAALPKPLVVVNIGWPRSNCRYGADLAKQLTDSLLNVLATCGSVRIALSY 300

Query: 299 RTPEKV 304
           +TP KV
Sbjct: 301 KTPAKV 306

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443460|ref|XP_004139495.1| PREDICTED: uncharacterized protein RP120-like [Cucumis sativus] gi|449492789|ref|XP_004159101.1| PREDICTED: uncharacterized protein RP120-like [Cucumis sativus]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/304 (73%), Positives = 257/304 (84%)

Query: 1   MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVL 60
           MRPIRL EP + TM   EIF  G Y VIRRAVVIGNG P +ENQC+GLV+ALGL+DKHVL
Sbjct: 1   MRPIRLREPSSPTMAKAEIFEGGVYGVIRRAVVIGNGSPCAENQCIGLVQALGLADKHVL 60

Query: 61  YRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGL 120
           YRVTRPRGGIN+WLHWLPVS+HKKL+Y++  I  Y+R+L  ++G K V    ENGG+ GL
Sbjct: 61  YRVTRPRGGINDWLHWLPVSLHKKLDYIMTLIGVYTRVLLRSKGRKLVPLSSENGGSTGL 120

Query: 121 SSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVH 180
           S +LEAD++ IV+M RETYEK GPLLVVASGRDTI+I SSI+RL S+NVFVVQIQHPR+H
Sbjct: 121 SCILEADLKHIVSMVRETYEKSGPLLVVASGRDTITITSSIRRLVSENVFVVQIQHPRLH 180

Query: 181 LNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRS 240
           LNRFDLVITP HDYYPLTP+ +E++P+F+R+WITP EPPD  VVLT GALHQID AALRS
Sbjct: 181 LNRFDLVITPHHDYYPLTPQAKEQVPRFIRKWITPREPPDQRVVLTVGALHQIDFAALRS 240

Query: 241 AASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRT 300
           AASAWH+ FAPLPKPL+VVN+GGPT  CRYG DLAKQL   LL+VL SCGS+RISFS RT
Sbjct: 241 AASAWHDVFAPLPKPLLVVNIGGPTSRCRYGVDLAKQLVTGLLSVLASCGSVRISFSDRT 300

Query: 301 PEKV 304
           PEKV
Sbjct: 301 PEKV 304

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541390|ref|XP_003539160.1| PREDICTED: uncharacterized protein RP120-like [Glycine max]

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 214/306 (69%), Positives = 262/306 (85%), Gaps = 2/306 (0%)

Query: 1   MRPIRLPEPPTQTM--GVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKH 58
           MR I+LPEPP+ T   G P+IF +G ++ +RRA+VIGNG+  SENQ VGLVRALGLSDKH
Sbjct: 1   MRRIQLPEPPSPTSRSGTPDIFESGVHTFVRRAIVIGNGFAASENQSVGLVRALGLSDKH 60

Query: 59  VLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNV 118
           VLYR+TRP+GGINEWL WLPVS+HKK++Y++R ICGYS+L+  ++ +K V  P ENG   
Sbjct: 61  VLYRITRPKGGINEWLQWLPVSLHKKIDYIVRMICGYSQLMLKSQEKKLVPLPSENGVGA 120

Query: 119 GLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPR 178
           GL +VLEADV++IV+ ARETYEK+GPLLVVA GRDTIS ASSIKRLAS+N FVVQIQ+PR
Sbjct: 121 GLLAVLEADVKEIVSFARETYEKEGPLLVVACGRDTISTASSIKRLASENAFVVQIQNPR 180

Query: 179 VHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAAL 238
           +HLNRFD+VITP+HDYYPLTPEGQ+++P FLR WITP +PPD HVVLT GALHQID +++
Sbjct: 181 LHLNRFDMVITPKHDYYPLTPEGQKQVPWFLRSWITPRDPPDCHVVLTMGALHQIDFSSI 240

Query: 239 RSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSM 298
           RS A++WH+EFA +P+PL+VVN+GGPT  CRYG DLAKQL A LL+VL SCGS+RISFS 
Sbjct: 241 RSVAASWHDEFAHVPRPLLVVNIGGPTRNCRYGVDLAKQLAASLLSVLASCGSVRISFSE 300

Query: 299 RTPEKV 304
           RTP+KV
Sbjct: 301 RTPQKV 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544742|ref|XP_003540806.1| PREDICTED: uncharacterized protein RP120-like [Glycine max]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/306 (68%), Positives = 261/306 (85%), Gaps = 2/306 (0%)

Query: 1   MRPIRLPEPPTQT--MGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKH 58
           MR I+LPEPP+ T   G P+IF +G ++ +RRAVVIGNG+  SENQ VGLVRALGLSDKH
Sbjct: 1   MRRIQLPEPPSPTGRSGTPDIFESGVHTFVRRAVVIGNGFAASENQSVGLVRALGLSDKH 60

Query: 59  VLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNV 118
           VLYRVTRP+ GINEWL WLP+S+HKK++Y++R I GYS+L+  ++ +K +  P ENG + 
Sbjct: 61  VLYRVTRPKAGINEWLQWLPISLHKKIDYIVRMIRGYSQLMLKSQEKKLMPSPSENGVSA 120

Query: 119 GLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPR 178
           GL +VLEADV++IV+ A ETYEK+GPLLVVA GRDTIS ASSIKRLAS+NVFVVQIQHPR
Sbjct: 121 GLLAVLEADVKEIVSFAHETYEKEGPLLVVACGRDTISTASSIKRLASENVFVVQIQHPR 180

Query: 179 VHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAAL 238
           +HL  FD+VITP+HDYYPLTPEGQE++P+FL+ WITP +PPD HVVLT GALHQID +++
Sbjct: 181 LHLKGFDMVITPKHDYYPLTPEGQEQVPRFLQSWITPRDPPDCHVVLTMGALHQIDFSSI 240

Query: 239 RSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSM 298
           RS A++WH+EFA +P+PL+VVN+GGPT  CRYG DLAK+L A LLNVL SCGS+RISFS+
Sbjct: 241 RSVAASWHDEFAHVPRPLLVVNIGGPTRNCRYGVDLAKELAASLLNVLASCGSVRISFSV 300

Query: 299 RTPEKV 304
           RTP+KV
Sbjct: 301 RTPQKV 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462938|ref|XP_004149192.1| PREDICTED: uncharacterized protein RP120-like [Cucumis sativus]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 239/309 (77%), Gaps = 5/309 (1%)

Query: 1   MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVL 60
           MRPIRLPEPP  + GVPEIF    Y VIRRA+VIGNG+PG+ENQC+GLVRALGLS +H L
Sbjct: 1   MRPIRLPEPPNGSFGVPEIFDGRIYGVIRRAIVIGNGFPGAENQCLGLVRALGLSGRHSL 60

Query: 61  YRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGL 120
           YRV RPRGG N WLHWLPVSVHKKL+   +QI G S      +   P+          GL
Sbjct: 61  YRVMRPRGGTNTWLHWLPVSVHKKLDSFFKQIFGDSSRKVEGKNGMPLMTK-----KTGL 115

Query: 121 SSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVH 180
           S +LEAD +QI   ARET++ DGPLLV+ASGRDTIS+ASSIKR A +NVFVVQIQHPR  
Sbjct: 116 SDILEADAKQIAKEARETFDMDGPLLVIASGRDTISVASSIKRFAPENVFVVQIQHPRSR 175

Query: 181 LNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRS 240
           L+RFDLVITPRHDYYPLTP  +++IP  LRRWITP EPP  +VVLT GALHQ D AALR+
Sbjct: 176 LDRFDLVITPRHDYYPLTPHARQQIPWLLRRWITPREPPGKNVVLTVGALHQADFAALRT 235

Query: 241 AASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRT 300
           AASAWH E A LPKPL+VVN+GGP+  CRYG DLAKQL + L NVL SCGS+RISFS RT
Sbjct: 236 AASAWHNELASLPKPLLVVNIGGPSSNCRYGVDLAKQLASMLQNVLWSCGSVRISFSRRT 295

Query: 301 PEKVLQQLL 309
           PEKV + L+
Sbjct: 296 PEKVSKILV 304

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
TAIR|locus:2176332	427	ELM1 "ELONGATED MITOCHONDRIA 1	0.974	0.711	0.715	4.1e-120
TAIR|locus:2160737	404	AT5G06180 "AT5G06180" [Arabido	0.692	0.534	0.585	1.2e-85

TAIR|locus:2176332 ELM1 "ELONGATED MITOCHONDRIA 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
 Identities = 219/306 (71%), Positives = 262/306 (85%)

Query:     1 MRPIRLPEPPTQTMGVPEIFA-AGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHV 59
             MRPI LP+PP+ + GVP+IF   G+++V+RRAVVIGNG+PGSENQC+GLVRALGLSD H+
Sbjct:     1 MRPILLPDPPSLSTGVPDIFEQGGSHNVVRRAVVIGNGFPGSENQCIGLVRALGLSDNHL 60

Query:    60 LYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCH-PLENGGNV 118
             LYRVTRP+GG+NEWLHWLPV  HKKL++++R I  YSRL+  ++  K +   P ENGGNV
Sbjct:    61 LYRVTRPKGGLNEWLHWLPVGFHKKLDFILRHIYLYSRLMLGSKQSKYISSVPSENGGNV 120

Query:   119 GLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPR 178
             GL+S+LEADV+ IV +AR+TYEKDGPL+V+A GRDTISIASSI+RLAS+NVFVVQIQHPR
Sbjct:   121 GLASILEADVKGIVNLARQTYEKDGPLIVIACGRDTISIASSIRRLASENVFVVQIQHPR 180

Query:   179 VHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAAL 238
              HLNRFD+VITPRHDYYPLT E QE++P+F+R WITP EPP  HVVLTTGALHQID A+L
Sbjct:   181 SHLNRFDMVITPRHDYYPLTLEAQEQVPRFMRSWITPREPPQDHVVLTTGALHQIDYASL 240

Query:   239 RSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSM 298
             R AASAWH+EFA LPKPLVVVN+G P   CRYG+DLAKQLT  LLNVL +CGS+RI+ S 
Sbjct:   241 RKAASAWHDEFAALPKPLVVVNIGWPRSNCRYGADLAKQLTDSLLNVLATCGSVRITLSY 300

Query:   299 RTPEKV 304
             +TP KV
Sbjct:   301 KTPAKV 306

GO:0005634 "nucleus" evidence=ISM

GO:0000266 "mitochondrial fission" evidence=IMP

GO:0005741 "mitochondrial outer membrane" evidence=IDA

TAIR|locus:2160737 AT5G06180 "AT5G06180" [Arabidopsis thaliana (taxid:3702)]

 Score = 662 (238.1 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
 Identities = 137/234 (58%), Positives = 169/234 (72%)

Query:    74 LHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEAD-VRQIV 132
             L WLP+S++K++   I  IC     LS             N    G+++V E D  +QI 
Sbjct:    69 LQWLPISLYKRIHRFISTICAG---LSI------------NA--TGITNVFEVDDAKQIA 111

Query:   133 TMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRH 192
              MAR+T+EK+GPLLVVASG DTIS+ASSI+RLA +NVFVVQ+QHPR HL RFDLVITP+H
Sbjct:   112 AMARKTFEKNGPLLVVASGSDTISVASSIRRLAMENVFVVQVQHPRSHLERFDLVITPQH 171

Query:   193 DYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPL 252
             DY+ LTPEG+ +IP FLR W+TP E P  +V LTTGALH  D++ LR+A S W  EFA L
Sbjct:   172 DYFSLTPEGKRQIPFFLRPWVTPREHPGRNVFLTTGALHYADASTLRNATSEWKNEFASL 231

Query:   253 PKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQ 306
             PKPLVVVN+GGPT  C YG DLAKQL   L ++L SCGS+RISFS RTP+KV++
Sbjct:   232 PKPLVVVNIGGPTRNCLYGVDLAKQLCGMLQSILWSCGSLRISFSRRTPKKVVE 285

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	312
pfam06258	308	pfam06258, Mito_fiss_Elm1, Mitochondrial fission E	1e-50
COG3660	329	COG3660, COG3660, Predicted nucleoside-diphosphate	3e-23

>gnl|CDD|218962 pfam06258, Mito_fiss_Elm1, Mitochondrial fission ELM1

 Score =  169 bits (430), Expect = 1e-50
 Identities = 82/271 (30%), Positives = 109/271 (40%), Gaps = 74/271 (27%)

Query: 39  PGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRL 98
            G ENQ +GL  ALGL     L  V      + +   WLP                    
Sbjct: 1   AGHENQALGLAEALGL--PFELREVR-----VRKPWRWLP-------------------- 33

Query: 99  LSAARGEKPVCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIA 158
                                    L A +  I+       E   P LV+ +GR T  + 
Sbjct: 34  -----------------------RRLPAPLWAILGPFAPALEPPWPDLVIGAGRQTHPLL 70

Query: 159 SSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEP 218
             ++RL+      VQI  PR+ L RFDLVI P HD                        P
Sbjct: 71  RLLRRLSGGKTKTVQIMDPRLPLGRFDLVIAPEHDG----------------------VP 108

Query: 219 PDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQL 278
           P  +V+LT GALH++    L  AA+AW  E A LP+P V V VGGP+   R+ +D A++L
Sbjct: 109 PGPNVLLTPGALHRVTPQRLAEAAAAW-PELAALPRPRVAVLVGGPSKHFRWDADAARRL 167

Query: 279 TAHLLNVLVSCG-SIRISFSMRTPEKVLQQL 308
              L  +L + G S+ I+ S RTPE     L
Sbjct: 168 LEQLQALLAAYGGSLLITTSRRTPEAAEAAL 198

In plants, this family is involved in mitochondrial fission. It binds to dynamin-related proteins and plays a role in their relocation from the cytosol to mitochondrial fission sites. Its function in bacteria is unknown. Length = 308

>gnl|CDD|226186 COG3660, COG3660, Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

 Score = 97.6 bits (243), Expect = 3e-23
 Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 29/173 (16%)

Query: 141 KDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPE 200
           +  P L++ +GR T  +A  +K+     + VVQIQ PR+  N FDLVI P HD+      
Sbjct: 68  EQRPDLIITAGRRTAPLAFYLKK-KFGGIKVVQIQDPRLPYNHFDLVIVPYHDW------ 120

Query: 201 GQEKIPQFLRRWITPCEPPDGHVVLT-TGALHQIDS---AALRSAASAWHEEFAPLPKPL 256
                               G  +L   G+ H + S   AALR A     +   PLP+  
Sbjct: 121 -------------REELSDQGPNILPINGSPHNVTSQRLAALREAF----KHLLPLPRQR 163

Query: 257 VVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCG-SIRISFSMRTPEKVLQQL 308
           V V VGG      +  D A Q  + L+ +L + G S  ISFS RTP+ V   L
Sbjct: 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSIL 216

Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	100.0
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	100.0
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	84.1
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	82.61
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	80.96

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=100.00  E-value=3.5e-50  Score=384.20  Aligned_cols=201  Identities=33%  Similarity=0.495  Sum_probs=174.0

Q ss_pred             ccchhhHHHHHHHhCC--CcccceeEeeccCCCccccccccchhhhhhhHHHHHHhhcchhhhhhccCCCCcccCCCCCC
Q 021482           39 PGSENQCVGLVRALGL--SDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGG  116 (312)
Q Consensus        39 aG~~nQ~~GLaeALg~--~~~~~~~~~~~p~~~~~~~~~~Lp~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~p~~~~~~~  116 (312)
                      |||+|||+|||+|||+  ++++   +.+.++.+|    +|+|..+.   ..+ .                          
T Consensus         1 ~Gh~~Q~~GLa~aL~~~~~~~~---~~v~~~~~~----~~lp~~~~---~~~-~--------------------------   43 (311)
T PF06258_consen    1 PGHENQSLGLAEALGRLTPYEI---KRVDVRRPW----RWLPRLLP---APL-R--------------------------   43 (311)
T ss_pred             CchHHHHHHHHHHhcCccCcce---eEeccccch----hhcccccc---chH-H--------------------------
Confidence            7999999999999999  6665   457777776    55543221   000 0                          


Q ss_pred             CCCCcchhhhhHHHHHHhhhhccCCCCCcEEEEecCccHHHHHHHHHHhCCCceEEEEcCCCCCCCCccEEeeccCCCCC
Q 021482          117 NVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYP  196 (312)
Q Consensus       117 ~~G~~~~l~~d~~~~~~~~~~~~~~p~PdLvIsaGr~T~~~~~~lrr~~gg~~~~V~i~~P~~~~~~FDlVi~P~HD~~~  196 (312)
                           .+..        ...+.++++||||||||||+|+++++++||++||++++||||+|+++.+.||+||+|+||++ 
T Consensus        44 -----~~~~--------~~~~~~~~~~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~P~~~~~~FDlvi~p~HD~~-  109 (311)
T PF06258_consen   44 -----ALLK--------PFSPALEPPWPDLIISAGRRTAPAALALRRASGGRTKTVQIMDPRLPPRPFDLVIVPEHDRL-  109 (311)
T ss_pred             -----Hhhh--------cccccccCCCCcEEEECCCchHHHHHHHHHHcCCCceEEEEcCCCCCccccCEEEECcccCc-
Confidence                 0000        00124567999999999999999999999999999999999999999999999999999998 


Q ss_pred             CCccccccchhhhhcccCCCCCCCCcEEEecCCCccCCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCCCCcccCHHHHH
Q 021482          197 LTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAK  276 (312)
Q Consensus       197 l~~~~~~~~p~~~~~~~~~~~~~~~NVl~t~Galh~vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk~~~~~~~~a~  276 (312)
                                           ++++||+.|.|+||++|++.|++++++|+++|+++++|+++|||||+|++|.|++++++
T Consensus       110 ---------------------~~~~Nvl~t~ga~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~  168 (311)
T PF06258_consen  110 ---------------------PRGPNVLPTLGAPNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAE  168 (311)
T ss_pred             ---------------------CCCCceEecccCCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHH
Confidence                                 48999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH-cCCeEEEEcCCCCcHHHHHHHhhc
Q 021482          277 QLTAHLLNVLV-SCGSIRISFSMRTPEKVLQQLLIC  311 (312)
Q Consensus       277 ~L~~~l~~l~~-~~~sl~ITtSRRTP~~~~~~L~~~  311 (312)
                      +|+++|.++++ .+++|+||||||||++++++|++.
T Consensus       169 ~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~  204 (311)
T PF06258_consen  169 RLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALREL  204 (311)
T ss_pred             HHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHh
Confidence            99999999998 567999999999999999999763

The function of this family is unknown.

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-44  Score=337.29  Aligned_cols=216  Identities=29%  Similarity=0.400  Sum_probs=173.1

Q ss_pred             eEEEEEcCCCccchhhHHHHHHHhCC-CcccceeEeeccCCCccccccccchhhhhhhHHHHHHhhcchhhhhhccCCCC
Q 021482           29 RRAVVIGNGYPGSENQCVGLVRALGL-SDKHVLYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKP  107 (312)
Q Consensus        29 ~~~wVLsDG~aG~~nQ~~GLaeALg~-~~~~~~~~~~~p~~~~~~~~~~Lp~~~~~~~~~~~r~~~~~~~~~~~~~~~~~  107 (312)
                      +++|+++||++|++.||+|||+.|-. .+..   .++.+    +.+ ..||..++                       ++
T Consensus         1 ~ki~aisD~RtGnt~QaiaLa~~l~r~eytt---k~l~~----~~l-~~lP~~wl-----------------------~~   49 (329)
T COG3660           1 MKIWAISDGRTGNTHQAIALAEQLTRSEYTT---KLLEY----NNL-AKLPNFWL-----------------------AY   49 (329)
T ss_pred             CceEEeecCCCccHHHHHHHHHHhhccceEE---EEeec----ccc-ccCchhhh-----------------------hc
Confidence            47999999999999999999999975 3433   23322    211 33333211                       11


Q ss_pred             cccCCCCCCCCCCcchhhhhHHHHHHhhhhccCCCCCcEEEEecCccHHHHHHHHHHhCCCceEEEEcCCCCCCCCccEE
Q 021482          108 VCHPLENGGNVGLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLV  187 (312)
Q Consensus       108 ~p~~~~~~~~~G~~~~l~~d~~~~~~~~~~~~~~p~PdLvIsaGr~T~~~~~~lrr~~gg~~~~V~i~~P~~~~~~FDlV  187 (312)
                      +|.+.       ++..|+.-.        +-....+|||||+|||+|+++++.+||.++| .++||||+|++|.+.||+|
T Consensus        50 yp~~~-------~~~l~~~~~--------~r~p~~~Pdl~I~aGrrta~l~~~lkk~~~~-~~vVqI~~Prlp~~~fDlv  113 (329)
T COG3660          50 YPIHI-------LRELFGPRL--------SRKPEQRPDLIITAGRRTAPLAFYLKKKFGG-IKVVQIQDPRLPYNHFDLV  113 (329)
T ss_pred             CccHh-------HHHhhcCcc--------ccCccCCCceEEecccchhHHHHHHHHhcCC-ceEEEeeCCCCCcccceEE
Confidence            22211       133332211        1122358999999999999999999999998 8999999999999999999


Q ss_pred             eeccCCCCCCCccccccchhhhhcccCCCCCCCCcEEEecCCCccCCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCCCC
Q 021482          188 ITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGC  267 (312)
Q Consensus       188 i~P~HD~~~l~~~~~~~~p~~~~~~~~~~~~~~~NVl~t~Galh~vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk~  267 (312)
                      |+|+||...+                  ....++|++...|++|+||+++|+..+++++..+ ++++++|||||||+|+.
T Consensus       114 ivp~HD~~~~------------------~s~~~~Nilpi~Gs~h~Vt~~~lAa~~e~~~~~~-p~~rq~vAVlVGg~nk~  174 (329)
T COG3660         114 IVPYHDWREE------------------LSDQGPNILPINGSPHNVTSQRLAALREAFKHLL-PLPRQRVAVLVGGNNKA  174 (329)
T ss_pred             eccchhhhhh------------------hhccCCceeeccCCCCcccHHHhhhhHHHHHhhC-CCCCceEEEEecCCCCC
Confidence            9999998721                  1125999999999999999999999999987666 99999999999999999


Q ss_pred             cccCHHHHHHHHHHHHHHHH-cCCeEEEEcCCCCcHHHHHHHhh
Q 021482          268 CRYGSDLAKQLTAHLLNVLV-SCGSIRISFSMRTPEKVLQQLLI  310 (312)
Q Consensus       268 ~~~~~~~a~~L~~~l~~l~~-~~~sl~ITtSRRTP~~~~~~L~~  310 (312)
                      |.|.+|.+.+++..+...++ .|++++||+|||||+.+.++|+.
T Consensus       175 f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~  218 (329)
T COG3660         175 FVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKN  218 (329)
T ss_pred             CccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHh
Confidence            99999999999999999887 78999999999999999999875

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=84.10  E-value=32  Score=32.96  Aligned_cols=28  Identities=11%  Similarity=0.184  Sum_probs=24.4

Q ss_pred             eeEEEEEcCCCc-cchhhHHHHHHHhCCC
Q 021482           28 IRRAVVIGNGYP-GSENQCVGLVRALGLS   55 (312)
Q Consensus        28 ~~~~wVLsDG~a-G~~nQ~~GLaeALg~~   55 (312)
                      ..|+.|+|++.= ||..=+.+|+++|...
T Consensus         4 ~~rili~t~~~G~GH~~~a~al~~~l~~~   32 (380)
T PRK13609          4 NPKVLILTAHYGNGHVQVAKTLEQTFRQK   32 (380)
T ss_pred             CCeEEEEEcCCCchHHHHHHHHHHHHHhc
Confidence            458999999987 8999999999999754

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=82.61  E-value=26  Score=34.13  Aligned_cols=26  Identities=19%  Similarity=0.357  Sum_probs=23.4

Q ss_pred             eEEEEEcCCCccchhhHHHHHHHhCC
Q 021482           29 RRAVVIGNGYPGSENQCVGLVRALGL   54 (312)
Q Consensus        29 ~~~wVLsDG~aG~~nQ~~GLaeALg~   54 (312)
                      +++++.+-|--||..=+++||+.|.-
T Consensus         2 ~~i~~~~GGTGGHi~Pala~a~~l~~   27 (352)
T PRK12446          2 KKIVFTGGGSAGHVTPNLAIIPYLKE   27 (352)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHHHHh
Confidence            47888999999999999999999974

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=80.96  E-value=51  Score=31.16  Aligned_cols=30  Identities=17%  Similarity=0.231  Sum_probs=25.1

Q ss_pred             eEEEEEcCCCccchhhHHHHHHHhCCC-ccc
Q 021482           29 RRAVVIGNGYPGSENQCVGLVRALGLS-DKH   58 (312)
Q Consensus        29 ~~~wVLsDG~aG~~nQ~~GLaeALg~~-~~~   58 (312)
                      +++.+++.|.-||+.|+.-||++|.-. +++
T Consensus         2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev   32 (357)
T PRK00726          2 KKILLAGGGTGGHVFPALALAEELKKRGWEV   32 (357)
T ss_pred             cEEEEEcCcchHhhhHHHHHHHHHHhCCCEE
Confidence            578899999999999999999999754 444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	91.86

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=91.86  E-value=0.64  Score=43.37  Aligned_cols=25  Identities=12%  Similarity=0.256  Sum_probs=21.4

Q ss_pred             eEEEEEcCCCccchhhHHHHHHHhC
Q 021482           29 RRAVVIGNGYPGSENQCVGLVRALG   53 (312)
Q Consensus        29 ~~~wVLsDG~aG~~nQ~~GLaeALg   53 (312)
                      .+|++.+-|-.||.+-|++||++|-
T Consensus         3 ~~i~i~~GGTgGHi~palala~~L~   27 (365)
T 3s2u_A            3 GNVLIMAGGTGGHVFPALACAREFQ   27 (365)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCHHHHHHHHHHHHHHH
Confidence            4677777788899999999999994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00