Citrus Sinensis ID: 021496

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
Protein Sequence
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNEDQNLESGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNFNNCRHFCRHGCFYLLTIERVFFVQEHVN
Secondary Structure (PSIPRED)
ccccccccEEEEEEEccccHHHHHHHcccEEEcccccccccccccccEEEEEccccccccccccccccEEEEcccccccHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccccccccccccccccccccccEEEcccccHHEEccEEEEEEcccccHHHHHHHHHHHcccccccccEEEEccccccccccccccEEEEccccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccHHHHcccEEEEEEEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cccEEcccEEEEEEcccccccHHHHHHcccccccccEEEEccccccEEEEEcccccccccccccccccEEEEEccccccHHHHHHHHHHcccHHHHHEEccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHccccccccccccccccccccccccEEEEcccccEEEEccEEEEEcccEccHHHHHHHHHHHHHHHHccccEEEEccccccccccccccEEEEEccccccccHcHccHHHHHHHcHHccccccHHHHHHHHHHHHHHHHHHccccHHHHccccEEEEEEHHHEEEEHccc
Coil and Loop (DISEMBL)
masiwtlqfhslyfphrvSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVrdsassnedqnlesgkvavaadtktkdpVAKFQETlislppvafVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRsrynrpgsvedlvrrgqlrsdrrgisrplkyedpfnnplvkvgksnstmemcgkvyrlapitltkeQQTIHQKRRsrayqwkrptiflkegdlippdvdpdtvrwipanhpfattandidedlaqnnvyqkqgvpfRIRAEHEALQKKLEALQNFNncrhfcrhGCFYLLTIERVFFVQEHVN
Flexible Loop (DISEMBL)
masiwtlqfhslyfpHRVSSTVAKLRTEFTlsqgrlslnrwstnrKFQLKAVrdsassnedqnlesgkvavaadtktkdPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVrrsrynrpgsvedlvrrgqlrsdrrgisrplkyedpfnnplvkvgksnstmeMCGKVYRLapitltkeqqtihqkrrsrayqwkrptiflkegdlippdVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNFNNCRHFCRHGCFYLLTIERVFFVQEHVN
Low Complexity Region (SEG)
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNEDQNLESGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNFNNCRHFCRHGCFYLLTIERVFFVQEHVN
Disordered region (IsUnstruct)
***IWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTN************************************VAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYN***********************************V*******TMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNFNNCRHFCRHGCFYLLTIERVFFVQ****
Disordered Region (DISOPRED)
**SIWTLQFHSLYFPHRV************LSQGRLSLNRWSTNRKF************************************FQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRA***********************************YEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITL****************QWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEH*******EALQNFNNCRHFCRHGCFYLLTIERVFFVQEHV*
Disordered Region (DISEMBL)
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLK***************SGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTK*************YQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNFNNCRHFCRHGCFYLLTIERVFFVQEHVN
Disordered Region (DISPRO)
*ASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSA*******L*SGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRS******SV********LRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNFNNCRHFCRHGCFYLLTIERVFFVQEH**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNEDQNLESGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNFNNCRHFCRHGCFYLLTIERVFFVQEHVN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
255539300	358	conserved hypothetical protein [Ricinus	0.807	0.701	0.676	3e-96
449455623	358	PREDICTED: uncharacterized protein LOC10	0.906	0.787	0.606	8e-96
225457624	335	PREDICTED: uncharacterized protein LOC10	0.884	0.820	0.633	2e-95
15218043	349	multiple chloroplast division site 1 [Ar	0.897	0.799	0.613	2e-92
8886939	364	F2D10.35 [Arabidopsis thaliana]	0.906	0.774	0.596	3e-91
297845062	351	hypothetical protein ARALYDRAFT_472319 [	0.906	0.803	0.591	8e-91
224083354	269	predicted protein [Populus trichocarpa]	0.649	0.750	0.787	1e-83
224065649	252	predicted protein [Populus trichocarpa]	0.594	0.734	0.821	2e-82
356508508	361	PREDICTED: uncharacterized protein LOC10	0.816	0.703	0.597	5e-80
363807146	363	uncharacterized protein LOC100812404 [Gl	0.800	0.685	0.578	3e-79

>gi|255539300|ref|XP_002510715.1| conserved hypothetical protein [Ricinus communis] gi|223551416|gb|EEF52902.1| conserved hypothetical protein [Ricinus communis]

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 180/266 (67%), Positives = 208/266 (78%), Gaps = 15/266 (5%)

Query: 17  RVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNEDQNLESGKVAVAADTK 76
           R+S    ++R EF LS  ++ LNR  TN    L+A + S +  ED+            T 
Sbjct: 41  RLSPKFMEIRREFVLSHYQIKLNRSFTN---PLRASKGSVNPTEDEQ-----------TP 86

Query: 77  TKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRP-G 135
           T   + KFQ  + +LPPV FV +R + S+  I L ++TAFLVI +R ++VR++RY RP G
Sbjct: 87  TVSSLDKFQAIISTLPPVVFVRRRQSGSNIIIWLCVATAFLVIALRVYVVRKTRYRRPPG 146

Query: 136 SVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQ 195
           SV DLVRRGQLRSDRRGIS PLKY+DPFNNPLVKVGKSNST+EMCGKVYRLAP+TLTKEQ
Sbjct: 147 SVADLVRRGQLRSDRRGISMPLKYDDPFNNPLVKVGKSNSTVEMCGKVYRLAPVTLTKEQ 206

Query: 196 QTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNN 255
           Q IHQKRRSRAYQWKRPTIFLKEGD IPPDVDPDTVRWIPANHPFATTA+DIDEDLAQ N
Sbjct: 207 QAIHQKRRSRAYQWKRPTIFLKEGDSIPPDVDPDTVRWIPANHPFATTASDIDEDLAQTN 266

Query: 256 VYQKQGVPFRIRAEHEALQKKLEALQ 281
           VYQK GVPFRI+AEHEALQ+KLEALQ
Sbjct: 267 VYQKHGVPFRIQAEHEALQRKLEALQ 292

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455623|ref|XP_004145552.1| PREDICTED: uncharacterized protein LOC101205591 [Cucumis sativus] gi|449485086|ref|XP_004157065.1| PREDICTED: uncharacterized protein LOC101232095 [Cucumis sativus]

 Score =  356 bits (913), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 180/297 (60%), Positives = 218/297 (73%), Gaps = 15/297 (5%)

Query: 1   MASIWTLQFHSLYFPHRV-------SSTVAKLRTEF---TLSQGRLSLN--RWSTNRKFQ 48
           MA  WTLQ HSL F   V        S +++L        +  G L+ N  R      F 
Sbjct: 1   MAPNWTLQLHSLSFQPYVWVRKPPALSAISQLGIGSKWDGIRYGHLNCNSDRSRIGGNFV 60

Query: 49  LKAVRDSASSNEDQNLESGKVAVAADTKT---KDPVAKFQETLISLPPVAFVMKRHTRSS 105
           +K+   SAS++   N+E  ++ + + T +   +D + K QE +IS PP  F+M + TR+ 
Sbjct: 61  VKSGEGSASTDSGGNVEGDEIVLKSGTGSVASEDYIGKMQEMIISSPPGVFLMNKCTRNG 120

Query: 106 FAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNN 165
            AIG  + TA L IV R +++R+SR +  GSV DLVRRGQLRSDRRGIS+PLKY DPFNN
Sbjct: 121 LAIGFCVVTACLAIVARVYLMRKSRNSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 180

Query: 166 PLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPD 225
           PLVKV KSNS++EMCGKVYRLAP+TLTKE+Q IHQKRRSRAYQWKRPT+FLKEGD IPPD
Sbjct: 181 PLVKVDKSNSSVEMCGKVYRLAPVTLTKEEQNIHQKRRSRAYQWKRPTMFLKEGDSIPPD 240

Query: 226 VDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN 282
           VDPDT+RWIPANHPFATTA+DIDEDLAQNNVYQK GVPFRI+AEHEALQ+KLEALQ+
Sbjct: 241 VDPDTIRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKLEALQS 297

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457624|ref|XP_002274365.1| PREDICTED: uncharacterized protein LOC100261560 [Vitis vinifera] gi|297745587|emb|CBI40752.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 185/292 (63%), Positives = 220/292 (75%), Gaps = 17/292 (5%)

Query: 1   MASIWTLQFHSLY-------FPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVR 53
           MA +W  QFHS+        + H +SS + + R E  LS  R +  +  T R F  +A+ 
Sbjct: 1   MALVWNPQFHSISSQPSICGWKHGISSNILEHRRELGLSYSRYNWVQQRTARSFLFRALS 60

Query: 54  DSASSNEDQNLESGKVAVAADTKT---KDPVAKFQETLISLPPVAFVMKRHTRSSFAIGL 110
            SA+S+ED+        V  +T+    K+ + K QET+ S PPV FVMK+    +FAIGL
Sbjct: 61  KSANSDEDK-------VVKTETEINGWKNSIGKLQETIKSFPPVVFVMKKDVGINFAIGL 113

Query: 111 SLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKV 170
            ++T  LV+ VR ++ R+   +RPGSV DLVRRGQLRSDRRGIS PLKYEDPFNNPLVKV
Sbjct: 114 CVATTILVVAVRVYVARKVSSSRPGSVADLVRRGQLRSDRRGISSPLKYEDPFNNPLVKV 173

Query: 171 GKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDT 230
           GKSNST+EMCGKVYRLAP+TLTKEQQ IHQKRRSRAYQWKRPT+FLKEGD IP DVDPDT
Sbjct: 174 GKSNSTVEMCGKVYRLAPVTLTKEQQAIHQKRRSRAYQWKRPTMFLKEGDSIPSDVDPDT 233

Query: 231 VRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN 282
           VRWIPANHPFATTA++IDE LAQNNVYQK GVPFRI+AEHEALQ+KLEALQ+
Sbjct: 234 VRWIPANHPFATTASEIDEGLAQNNVYQKHGVPFRIQAEHEALQRKLEALQS 285

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218043|ref|NP_173507.1| multiple chloroplast division site 1 [Arabidopsis thaliana] gi|26452945|dbj|BAC43549.1| unknown protein [Arabidopsis thaliana] gi|29824121|gb|AAP04021.1| unknown protein [Arabidopsis thaliana] gi|332191908|gb|AEE30029.1| multiple chloroplast division site 1 [Arabidopsis thaliana]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 184/300 (61%), Positives = 229/300 (76%), Gaps = 21/300 (7%)

Query: 1   MASIWTLQFHSLYFPHRVSSTV--AKLRTEFTLSQGR---LSLN--RWSTNRKFQLKAVR 53
           MASI +LQFHSL     + S++  AKL+   +L   R   ++LN  ++ T   F  KA+ 
Sbjct: 1   MASIDSLQFHSLC---NLQSSIGRAKLQNPSSLVIFRRRPVNLNWVQFETKGSFVCKAIG 57

Query: 54  DSASSNED-QNLESGK--VAVAADTKTKDP------VAKFQETLISLPPVAFVMKRHTRS 104
           DS++ +ED QN +S    V V A T++  P      +++F+  + +LPPV F+MK+ + +
Sbjct: 58  DSSTPDEDIQNTQSDDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLPPVVFLMKKCSVN 117

Query: 105 SFAIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DRRGISRPLKYEDP 162
           S  IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DRRGIS+ L YEDP
Sbjct: 118 SIWIGVCITATVLVAAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDRRGISKSLNYEDP 177

Query: 163 FNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLI 222
           FNNP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWKRPTIFLKEGD I
Sbjct: 178 FNNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSI 237

Query: 223 PPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN 282
           PPDVDPDTVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEHEA+QKKLEALQN
Sbjct: 238 PPDVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQN 297

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8886939|gb|AAF80625.1|AC069251_18 F2D10.35 [Arabidopsis thaliana]

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 186/312 (59%), Positives = 228/312 (73%), Gaps = 30/312 (9%)

Query: 1   MASIWTLQFHSL------YFPHRVSSTV--------AKLRTEFTLSQGR---LSLN--RW 41
           MASI +LQFHSL        P   SS          AKL+   +L   R   ++LN  ++
Sbjct: 1   MASIDSLQFHSLCNLQVKIEPISSSSLTLIPSSIGRAKLQNPSSLVIFRRRPVNLNWVQF 60

Query: 42  STNRKFQLKAVRDSASSNED-QNLESGK--VAVAADTKTKDP------VAKFQETLISLP 92
            T   F  KA+ DS++ +ED QN +S    V V A T++  P      +++F+  + +LP
Sbjct: 61  ETKGSFVCKAIGDSSTPDEDIQNTQSDDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLP 120

Query: 93  PVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DR 150
           PV F+MK+ + +S  IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DR
Sbjct: 121 PVVFLMKKCSVNSIWIGVCITATVLVAAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDR 180

Query: 151 RGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWK 210
           RGIS+ L YEDPFNNP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWK
Sbjct: 181 RGISKSLNYEDPFNNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWK 240

Query: 211 RPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEH 270
           RPTIFLKEGD IPPDVDPDTVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEH
Sbjct: 241 RPTIFLKEGDSIPPDVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEH 300

Query: 271 EALQKKLEALQN 282
           EA+QKKLEALQN
Sbjct: 301 EAMQKKLEALQN 312

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845062|ref|XP_002890412.1| hypothetical protein ARALYDRAFT_472319 [Arabidopsis lyrata subsp. lyrata] gi|297336254|gb|EFH66671.1| hypothetical protein ARALYDRAFT_472319 [Arabidopsis lyrata subsp. lyrata]

 Score =  339 bits (870), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 177/299 (59%), Positives = 225/299 (75%), Gaps = 17/299 (5%)

Query: 1   MASIWTLQFHSLY-FPHRVSSTVAKLRTEFTLSQGR-LSLN--RWSTNRKFQLKAVRDSA 56
           MASI +LQFHSL      +  T  ++ +   + + R ++LN  ++ T R+F  KA+ +S+
Sbjct: 1   MASIDSLQFHSLCNLQSSIGRTKLQIPSSLVIFRRRPVNLNWVQFETKRRFACKAIDNSS 60

Query: 57  SSNED-QNLESGK--VAVAADTKTKD--------PVAKFQETLISLPPVAFVMKRHTRSS 105
           + +E+ QN ++    V V A T   D         V++F+  + + PP+ FVMK+ + +S
Sbjct: 61  TPDEEIQNTQNDNNVVVVTAATAQSDIIPHDSEYSVSRFRSMITTFPPLVFVMKKCSGNS 120

Query: 106 FAIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DRRGISRPLKYEDPF 163
             IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DRRGIS+ L YEDPF
Sbjct: 121 IWIGICITATVLVAAIRAYVVRKSRDNQRAGSVTDLVRRGQLRSGDRRGISKSLNYEDPF 180

Query: 164 NNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIP 223
           NNP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWKRPTIFLKEGD IP
Sbjct: 181 NNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSIP 240

Query: 224 PDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN 282
           PDVDP+TVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEHEA+QKKLEALQN
Sbjct: 241 PDVDPETVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQN 299

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083354|ref|XP_002306994.1| predicted protein [Populus trichocarpa] gi|222856443|gb|EEE93990.1| predicted protein [Populus trichocarpa]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 159/202 (78%), Positives = 180/202 (89%)

Query: 81  VAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDL 140
           ++KFQ  + +LPP  FVMKR   S+F I L ++TAFLV+ VR ++VR+SR +RPGSV DL
Sbjct: 1   ISKFQGMITTLPPFVFVMKRGAGSNFVIWLCIATAFLVVSVRVYMVRKSRPSRPGSVADL 60

Query: 141 VRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQ 200
           VRRGQLRSDRRGIS PLKYEDPFNNPLVKVGKSNST+E+ GKVY LAP+TLT+EQQ IHQ
Sbjct: 61  VRRGQLRSDRRGISSPLKYEDPFNNPLVKVGKSNSTIEIFGKVYHLAPVTLTEEQQAIHQ 120

Query: 201 KRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQ 260
           +RRSRAYQWKRPTIFLKEGD +PPDVDPDTVRWIP NHPFATTA+DIDEDLAQNNVYQK 
Sbjct: 121 RRRSRAYQWKRPTIFLKEGDPVPPDVDPDTVRWIPTNHPFATTASDIDEDLAQNNVYQKH 180

Query: 261 GVPFRIRAEHEALQKKLEALQN 282
           GVPFRI+AEHEALQ+KLEALQN
Sbjct: 181 GVPFRIKAEHEALQRKLEALQN 202

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065649|ref|XP_002301902.1| predicted protein [Populus trichocarpa] gi|222843628|gb|EEE81175.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 152/185 (82%), Positives = 170/185 (91%)

Query: 98  MKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPL 157
           M+R + S+F I L ++TAFLV+ VR ++VR+SR +RPGSV DLVRRGQLRSDRRGIS PL
Sbjct: 1   MRRASGSNFVIWLCVATAFLVVAVRVYVVRKSRQSRPGSVADLVRRGQLRSDRRGISSPL 60

Query: 158 KYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLK 217
           KYEDPFNNPLVKV KSNST+EMCGKVYRLAP+TLTK+QQ IHQ+RRSRAYQWKRPTIFLK
Sbjct: 61  KYEDPFNNPLVKVSKSNSTVEMCGKVYRLAPVTLTKDQQAIHQRRRSRAYQWKRPTIFLK 120

Query: 218 EGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKL 277
           EGD IPP+VDPDTVRWIPANHPFATTA+DIDEDLAQNNVYQK GVPFRI+AEHEALQ+KL
Sbjct: 121 EGDSIPPNVDPDTVRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKL 180

Query: 278 EALQN 282
           E LQN
Sbjct: 181 ETLQN 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508508|ref|XP_003522998.1| PREDICTED: uncharacterized protein LOC100793031 [Glycine max]

 Score =  303 bits (777), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 171/286 (59%), Positives = 199/286 (69%), Gaps = 32/286 (11%)

Query: 1   MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSAS-SN 59
           MAS+WTL F SL            LR    +S+   S             A R+  S  N
Sbjct: 1   MASVWTLHFRSL-----------SLRPCLYISRSNSST------------ATRNCISIRN 37

Query: 60  EDQNLESGKVAVAADTKTKDPVAKFQETLI---SLPPVAFVMKRHTRSSFAIGLSLSTAF 116
              N  SG   +  D+     + KF   L+   ++PP  F++ R+   +F I + ++   
Sbjct: 38  GISNWRSGTQQLKHDSINS--ITKFHHQLVNSVAIPP--FLLNRNGGGNFPIWVCVAVVV 93

Query: 117 LVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNST 176
           LV+ VR  +V R +  RPGSV DLVRRGQLRSDRRGISRPLKYEDPFNNP VKVGKS+ST
Sbjct: 94  LVVAVRVRVVSRKK-ERPGSVADLVRRGQLRSDRRGISRPLKYEDPFNNPFVKVGKSDST 152

Query: 177 MEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPA 236
           +EMCGKVYRLAP+TLT+EQQ  HQKRR RAYQWKRPTIFL+EGDL+PPDVDPDTVRWIPA
Sbjct: 153 VEMCGKVYRLAPVTLTQEQQATHQKRRLRAYQWKRPTIFLREGDLVPPDVDPDTVRWIPA 212

Query: 237 NHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN 282
           NHPFATTA D+DEDLAQNNVYQK GVPFRI+AEHEALQKKLEALQN
Sbjct: 213 NHPFATTATDLDEDLAQNNVYQKHGVPFRIQAEHEALQKKLEALQN 258

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807146|ref|NP_001242343.1| uncharacterized protein LOC100812404 [Glycine max] gi|255635109|gb|ACU17912.1| unknown [Glycine max]

 Score =  301 bits (771), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 169/292 (57%), Positives = 197/292 (67%), Gaps = 43/292 (14%)

Query: 1   MASIWTLQFHSL------YFPHRVSSTVAKLRTEFTLSQGRLSL-NRWSTNRKFQLKAVR 53
           MAS+WTL F SL      Y     SS   +          R+S+ NR S  R    +   
Sbjct: 1   MASVWTLHFRSLSLRPCLYISSNCSSAATR---------NRISIRNRISNWRSCAQQLKH 51

Query: 54  DSASSNEDQNLESGKVAVAADTKTKDPVAKFQETLI---SLPPVAFVMKRHTRSSFAIGL 110
           DS +S                      + KF   L+   ++PP  F++ ++  S+F I +
Sbjct: 52  DSINS----------------------ITKFHHQLVHSVTIPP--FLLNQNGGSNFPIWV 87

Query: 111 SLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKV 170
            ++   LV+ VR  +V   +  RPGSV DLVRRGQLRSDRRGISRPLKYEDPFNNP VKV
Sbjct: 88  CVAVVVLVVAVRMRVVVSRKKERPGSVADLVRRGQLRSDRRGISRPLKYEDPFNNPFVKV 147

Query: 171 GKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDT 230
           GKS+ST+EMCGKVYRLAPITLT+EQQ  HQKRR RAYQWKRPTIFL+EGD +PPDVDPDT
Sbjct: 148 GKSDSTVEMCGKVYRLAPITLTQEQQATHQKRRLRAYQWKRPTIFLREGDSVPPDVDPDT 207

Query: 231 VRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN 282
           VRWIPANHPFATTA D+DEDLAQNNVYQK G PFRI+AEHEALQKKLEALQN
Sbjct: 208 VRWIPANHPFATTATDLDEDLAQNNVYQKHGAPFRIQAEHEALQKKLEALQN 259

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
TAIR|locus:2030512	349	MCD1 "AT1G20830" [Arabidopsis	0.903	0.805	0.617	6.9e-86

TAIR|locus:2030512 MCD1 "AT1G20830" [Arabidopsis thaliana (taxid:3702)]

 Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
 Identities = 184/298 (61%), Positives = 227/298 (76%)

Query:     1 MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGR---LSLN--RWSTNRKFQLKAVRDS 55
             MASI +LQFHSL    + S   AKL+   +L   R   ++LN  ++ T   F  KA+ DS
Sbjct:     1 MASIDSLQFHSLC-NLQSSIGRAKLQNPSSLVIFRRRPVNLNWVQFETKGSFVCKAIGDS 59

Query:    56 ASSNED-QNLESGK--VAVAADTKTKDP------VAKFQETLISLPPVAFVMKRHTRSSF 106
             ++ +ED QN +S    V V A T++  P      +++F+  + +LPPV F+MK+ + +S 
Sbjct:    60 STPDEDIQNTQSDDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLPPVVFLMKKCSVNSI 119

Query:   107 AIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DRRGISRPLKYEDPFN 164
              IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DRRGIS+ L YEDPFN
Sbjct:   120 WIGVCITATVLVAAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDRRGISKSLNYEDPFN 179

Query:   165 NPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPP 224
             NP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWKRPTIFLKEGD IPP
Sbjct:   180 NPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSIPP 239

Query:   225 DVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN 282
             DVDPDTVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEHEA+QKKLEALQN
Sbjct:   240 DVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQN 297


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.134   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      311       311   0.00080  116 3  11 22  0.49    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  221 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.06u 0.12s 27.18t   Elapsed:  00:00:01
  Total cpu time:  27.06u 0.12s 27.18t   Elapsed:  00:00:01
  Start:  Thu May  9 22:04:33 2013   End:  Thu May  9 22:04:34 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0010020 "chloroplast fission" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	311
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 5e-06
 Identities = 53/357 (14%), Positives = 90/357 (25%), Gaps = 107/357 (29%)

Query: 10  HSLYFPHRVSSTVAKLRTEFTLSQGRLSL----NRWSTN--RKFQL----------KAVR 53
           HS     R+ S  A+LR           L    N  +      F L          K V 
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 54  DSASSNEDQNLESGKVAVA-ADTKTKDPVAKFQETLIS-LPPVAFVMKRHTRSSFAIGLS 111
           D  S+    ++     ++     + K  + K+ +     LP         T +   +  S
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV-----LTTNPRRL--S 331

Query: 112 LSTAFLVIVVRAFIVRRSRYNRPG----------SVEDL----VRR-----GQLRSDRRG 152
           +    +    R  +     +              S+  L     R+              
Sbjct: 332 IIAESI----RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH- 386

Query: 153 ISRPL--------KYEDPFN--NPLVKVGKSNSTMEMCGKVYRLAPITL-----TKEQQT 197
           I   L           D     N L K   S    +       +  I L      + +  
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHK--YSLVEKQPKESTISIPSIYLELKVKLENEYA 444

Query: 198 IHQKRRSRAYQWKRPTIFLKEGDLIPPDVDP---------------------------DT 230
           +H+      Y   +        DLIPP +D                            D 
Sbjct: 445 LHRSIVDH-YNIPKT---FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD- 499

Query: 231 VRWIPANHPFATTA----NDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNF 283
            R++       +TA      I   L Q   Y+       I       ++ + A+ +F
Sbjct: 500 FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY-----ICDNDPKYERLVNAILDF 551

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00