Citrus Sinensis ID: 021577

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Protein Sequence
MDGRKNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVAQWSCPRPREK
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHcEEEEccEEEEcccccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHccccccEEEEcccHHHHHHHHHHHHHHccccccccccEEEEEEEcccHHHHHHHHcccEEEccccccHHHHHHccccccccccEEEccEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcEEEEEccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEcccccccHHHHHHHHHccccEcEEccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEHHHHHHHHHHHHHHHHEEcccccccHHEEEcccccccccEEEcccEEEEccHHEEcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mdgrknpafvpewnledVRTTFLKcvgwqteetldpincpyhyycdstypgnyppaVDVLVLVYTAVSYLATLLLMVVDMvssrgpassfsqskrfllpsgpfsLPIILLMLAkghrinsvfplscvgpaILQLVYISALtfdfganenikYAFFEASTVSGILHASLYLDSVILPYYTGFDALVsssfsgecvscvcrkevLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDslylatnsppeQYLLRAAAFGGVFVLICLHLLKKACNKVaqwscprprek
Flexible Loop (DISEMBL)
mdgrknpafvpewnledvRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGECVSCVCRKEVLVVGGKLvtyrgwsvttslvvgtlCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACnkvaqwscprprek
Low Complexity Region (SEG)
MDGRKNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVAQWSCPRPREK
Disordered region (IsUnstruct)
********FVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATLLLMVVDMV*************RFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVAQWSC******
Disordered Region (DISOPRED)
******P**VPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATLLLMVVD****************FLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVA***C******
Disordered Region (DISEMBL)
MDGRKNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATLLLMVVDMVSS********QSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVA**********
Disordered Region (DISPRO)
*****NPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATLLLMVVDMVSSR*********KRFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVAQWSCPR****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDGRKNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVAQWSCPRPREK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
255548129	313	conserved hypothetical protein [Ricinus	0.980	0.971	0.660	1e-117
225453686	325	PREDICTED: uncharacterized protein LOC10	0.922	0.88	0.697	1e-115
224128089	308	predicted protein [Populus trichocarpa]	0.954	0.961	0.645	1e-108
357438849	324	hypothetical protein MTR_1g038260 [Medic	0.948	0.907	0.589	1e-101
449445746	305	PREDICTED: uncharacterized protein LOC10	0.896	0.911	0.588	8e-91
449523387	306	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.9	0.911	0.567	2e-87
255645961	231	unknown [Glycine max]	0.7	0.939	0.666	1e-80
42569841	310	uncharacterized protein [Arabidopsis tha	0.935	0.935	0.516	3e-72
29648963	310	hypothetical protein [Arabidopsis thalia	0.935	0.935	0.516	3e-72
357438855	322	hypothetical protein MTR_1g038290 [Medic	0.777	0.748	0.484	1e-71

>gi|255548129|ref|XP_002515121.1| conserved hypothetical protein [Ricinus communis] gi|223545601|gb|EEF47105.1| conserved hypothetical protein [Ricinus communis]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/306 (66%), Positives = 244/306 (79%), Gaps = 2/306 (0%)

Query: 5   KNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVY 64
           +NPAF PEW +ED+RTTF KCV WQ EETLDPINCPYHY+CDS YPGNYPP VD LV ++
Sbjct: 9   QNPAFQPEWAVEDIRTTFFKCVRWQVEETLDPINCPYHYFCDSNYPGNYPPYVDFLVFLF 68

Query: 65  TAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPL 124
              SYLATL++MV+D+  SR   +  S+SKRFLLPSGP SLPIILL LAKG+R NS+FPL
Sbjct: 69  ATSSYLATLVIMVIDI--SRKAGACLSRSKRFLLPSGPVSLPIILLALAKGYRTNSIFPL 126

Query: 125 SCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDAL 184
           SC GPAILQL+ +SAL FD G +++I+YA +EAST+SGILHASLYLDS+ILPYYTGFDAL
Sbjct: 127 SCTGPAILQLLQVSALAFDHGVDKDIRYAIYEASTISGILHASLYLDSIILPYYTGFDAL 186

Query: 185 VSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITA 244
           VSS+FSGEC SCVCR+EVLVVGG+LV YRGWS+TT  VVG LC RI+ R+    K ++ A
Sbjct: 187 VSSTFSGECQSCVCRREVLVVGGRLVDYRGWSITTFSVVGALCSRIICRMTGEKKRRMMA 246

Query: 245 IMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVAQWSC 304
           I  LLESLS+I I  D +YL   +PPEQ +LR AAFG V VLICLHL+KK  +++ QW+ 
Sbjct: 247 IKFLLESLSWILITLDCIYLTRKAPPEQSMLRIAAFGSVLVLICLHLIKKLSSQITQWNL 306

Query: 305 PRPREK 310
            + +  
Sbjct: 307 AQEKSN 312

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453686|ref|XP_002268979.1| PREDICTED: uncharacterized protein LOC100242133 [Vitis vinifera]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/291 (69%), Positives = 239/291 (82%), Gaps = 5/291 (1%)

Query: 5   KNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVY 64
           + PAF PEW LE+VR TF KCV WQ EET+DPINCPYHY+CDSTYPGNYPP VD+L+L++
Sbjct: 9   EKPAFQPEWALENVRMTFFKCVRWQVEETMDPINCPYHYFCDSTYPGNYPPVVDILLLLF 68

Query: 65  TAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPL 124
              SYL  L+   +++   R    SF Q++R+LLP+GP SLP+ILL LAKG RIN++FPL
Sbjct: 69  ATASYLGILVFTAMEISGGR----SFHQTRRYLLPTGPVSLPVILLALAKGRRINTIFPL 124

Query: 125 SCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDAL 184
           S VGPAILQL++ISAL FD  A+ +IKYAFFEAST+SGILHASLYLDSVILPYYTGFDAL
Sbjct: 125 SSVGPAILQLLHISALAFDTEADSDIKYAFFEASTISGILHASLYLDSVILPYYTGFDAL 184

Query: 185 VSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKITA 244
           VSS+FSGEC+SCVCRKEVLVVGG LV+YRGWS TT LVVGTLCLRI+ RL   +K K T 
Sbjct: 185 VSSTFSGECISCVCRKEVLVVGGMLVSYRGWSATTFLVVGTLCLRIICRLTADDKGKTTI 244

Query: 245 -IMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKK 294
            I S+LESL ++ I  DSLYL  NSPPE+ LL +AAFGGVFVLICLH+L+K
Sbjct: 245 FIKSVLESLCWMLITMDSLYLTKNSPPERSLLHSAAFGGVFVLICLHVLRK 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128089|ref|XP_002320241.1| predicted protein [Populus trichocarpa] gi|222861014|gb|EEE98556.1| predicted protein [Populus trichocarpa]

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/299 (64%), Positives = 235/299 (78%), Gaps = 3/299 (1%)

Query: 4   RKNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLV 63
           R++ AF  EW  EDV+  F KCV WQ E+T+DPINCPYHYYCDSTYPGN+PP VDVL  +
Sbjct: 4   RRDLAFRSEWPSEDVQAIFFKCVRWQVEDTMDPINCPYHYYCDSTYPGNHPPYVDVLAFL 63

Query: 64  YTAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFP 123
           +T   YL TL +MVVD +S RG  +   +SKR+L PSGP SLP+ILL+LAKG RIN+VFP
Sbjct: 64  FTTALYLVTLAIMVVD-ISRRG-RTYLRESKRYLQPSGPVSLPLILLVLAKGSRINTVFP 121

Query: 124 LSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDA 183
           LSC GPAILQL+ +SALTFD    ++++YAF +AST+SGILHASLYLDS+ILPYYTGFDA
Sbjct: 122 LSCFGPAILQLLQVSALTFDSRIEKDVRYAFLQASTISGILHASLYLDSIILPYYTGFDA 181

Query: 184 LVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAKIT 243
           LVSS+FSGEC +CVCRKEVLVVGG+L+ YRGWS+TT LV+G LC RI+ R+   NK+KI 
Sbjct: 182 LVSSTFSGECPTCVCRKEVLVVGGRLIRYRGWSLTTFLVIGVLCSRILCRVTGENKSKIM 241

Query: 244 AIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVAQW 302
           +I +LLESL  I I  D +YL   S PEQ L+R AAFGGV VLICL ++KK   ++ QW
Sbjct: 242 SIKTLLESLGLILITVDCIYLIRRS-PEQSLMRIAAFGGVLVLICLQMIKKMSAQMIQW 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438849|ref|XP_003589701.1| hypothetical protein MTR_1g038260 [Medicago truncatula] gi|357519495|ref|XP_003630036.1| hypothetical protein MTR_8g091100 [Medicago truncatula] gi|355478749|gb|AES59952.1| hypothetical protein MTR_1g038260 [Medicago truncatula] gi|355524058|gb|AET04512.1| hypothetical protein MTR_8g091100 [Medicago truncatula]

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 175/297 (58%), Positives = 232/297 (78%), Gaps = 3/297 (1%)

Query: 5   KNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVY 64
           KNP F P W+LE++  TF KC+ WQ EET+D INCPYHY CD TYP NY  ++D+LVL++
Sbjct: 9   KNPTFQPGWDLEEIHATFFKCISWQMEETMDAINCPYHYVCDKTYPPNYHLSIDILVLLF 68

Query: 65  TAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPL 124
           T +SY  TL +++++++S +G    FS SKRF LPSGP SLP+I+L+  KG++IN++FPL
Sbjct: 69  TTISYFLTLFIVIMNIISRKGTIF-FSLSKRFFLPSGPISLPLIILIFGKGNQINTIFPL 127

Query: 125 SCVGPAILQLVYISALTFDFGAN-ENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDA 183
           SC+GPAIL LV ISAL+FD  A+ ++I+Y FF ASTVSGILHASLYLDS++LPYYTGFDA
Sbjct: 128 SCIGPAILLLVLISALSFDNEADYKDIQYTFFAASTVSGILHASLYLDSIVLPYYTGFDA 187

Query: 184 LVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAK-I 242
           L+SS+ SGEC +CVCRKE LVVGGKLV Y+GWS+TT  VV  LCLRI+ +++  N  K +
Sbjct: 188 LMSSTLSGECATCVCRKEALVVGGKLVKYKGWSMTTFFVVSVLCLRIICKIFGENVGKFV 247

Query: 243 TAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKV 299
           + I  L+E  S+I I  D +YL   SPPE+ +LR  AFGG+F+LI LH+LK+AC+++
Sbjct: 248 SMIKVLMERFSWILISLDCVYLIAKSPPEKVMLRVVAFGGIFLLILLHVLKEACSQI 304

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445746|ref|XP_004140633.1| PREDICTED: uncharacterized protein LOC101220906 [Cucumis sativus]

 Score =  339 bits (870), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 166/282 (58%), Positives = 213/282 (75%), Gaps = 4/282 (1%)

Query: 14  NLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATL 73
            L + R  F KC  WQ EETLD  +CP+HYYCD+ YPG+YPPA+D+LVL++TA +YL+TL
Sbjct: 6   TLSNTRLIFFKCTRWQLEETLDKFSCPFHYYCDTIYPGDYPPAIDLLVLIFTATTYLSTL 65

Query: 74  LLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQ 133
           L M++DM S+RG    F Q K+FLLPSGPFSLP+ L +LAKGHRIN++FPL  +GP ILQ
Sbjct: 66  LFMLLDMSSNRG-KFCFDQPKKFLLPSGPFSLPVFLFVLAKGHRINTLFPLFLMGPPILQ 124

Query: 134 LVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGEC 193
           L+YISALTFD GA+++IKY FFEAST+SGILHASL LD VILPYYTG DAL+ S+FSGEC
Sbjct: 125 LIYISALTFDNGADKDIKYVFFEASTMSGILHASLNLDFVILPYYTGLDALIGSNFSGEC 184

Query: 194 VSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKA--KITAIMSLLES 251
            SCVCR   LVVGG+ V+YRGWS TT ++V  LC+RIV R+   N+   K+ A+  LLE 
Sbjct: 185 TSCVCRNAPLVVGGRFVSYRGWSSTTFVIVCVLCMRIVSRV-AGNEVVRKVVALKWLLEG 243

Query: 252 LSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLK 293
           L ++ I  D +YL+ N   E+  L+   +G VF L+ +H++K
Sbjct: 244 LGWVLITWDCVYLSANLGAERRELQGVVYGCVFGLVFIHVIK 285

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449523387|ref|XP_004168705.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230302 [Cucumis sativus]

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 160/282 (56%), Positives = 208/282 (73%), Gaps = 3/282 (1%)

Query: 14  NLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYLATL 73
            L + R  F KC  WQ EETLD  +CP+HYYCD+ YPG+YPPA+D+LVL++TA +YL+TL
Sbjct: 6   TLSNTRLIFFKCTRWQLEETLDKFSCPFHYYCDTIYPGDYPPAIDLLVLIFTATTYLSTL 65

Query: 74  LLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSCVGPAILQ 133
           L M++DM S+RG        +   +PSGPFSLP+ L +LAKGHRIN++FPL  +GP ILQ
Sbjct: 66  LFMLLDMSSNRGKFCFDXNPRSSFVPSGPFSLPVFLFVLAKGHRINTLFPLFLMGPPILQ 125

Query: 134 LVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVSSSFSGEC 193
           L+YISALTFD GA+++IKY FFEAST+SGILHASL LD VILPYYTG DAL+ S+FSGEC
Sbjct: 126 LIYISALTFDNGADKDIKYVFFEASTMSGILHASLNLDFVILPYYTGLDALIGSNFSGEC 185

Query: 194 VSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKA--KITAIMSLLES 251
            SCVCR   LVVGG+ V+YRGWS TT ++V  LC+RIV R+   N+   K+ A+  LLE 
Sbjct: 186 TSCVCRNAPLVVGGRFVSYRGWSSTTFVIVCVLCMRIVSRV-AGNEVVRKVVALKWLLEG 244

Query: 252 LSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLK 293
           L ++ I  D +YL+ N   E+  L+   +G VF L+ +H++K
Sbjct: 245 LGWVLITWDCVYLSANLGAERRELQGVVYGCVFGLVFIHVIK 286

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645961|gb|ACU23469.1| unknown [Glycine max]

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/219 (66%), Positives = 175/219 (79%), Gaps = 2/219 (0%)

Query: 7   PAFVPEWNLED-VRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYT 65
           P   P W+L+D +  TF KC+ WQ EETLD +NCPYHY+CD TYP NYP  VD+LVL++T
Sbjct: 11  PTIQPGWDLDDEIHATFFKCISWQVEETLDTVNCPYHYFCDKTYPSNYPLVVDILVLLFT 70

Query: 66  AVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLS 125
           A SY  TL ++V+DM S RG      QSKRFLLPSGP SLP+I+L  AKG +IN++FPL+
Sbjct: 71  AASYFVTLAILVMDMSSGRGRIF-LCQSKRFLLPSGPISLPLIILPFAKGPQINTIFPLN 129

Query: 126 CVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALV 185
           C+GPAIL +V ISAL+FD  A+++ KY FF ASTVSGILHASLYLDSV+LPYYTGFDAL+
Sbjct: 130 CIGPAILLMVLISALSFDNAADKDFKYTFFVASTVSGILHASLYLDSVVLPYYTGFDALM 189

Query: 186 SSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVG 224
           SS+FSGEC SCVCRKE L VGGKLV YRGWS+TT L+ G
Sbjct: 190 SSTFSGECASCVCRKEALFVGGKLVRYRGWSMTTFLLWG 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42569841|ref|NP_181692.2| uncharacterized protein [Arabidopsis thaliana] gi|50058893|gb|AAT69191.1| hypothetical protein At2g41610 [Arabidopsis thaliana] gi|330254913|gb|AEC10007.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/298 (51%), Positives = 211/298 (70%), Gaps = 8/298 (2%)

Query: 12  EWNLE-DVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYL 70
           EW ++ D + TF KC  WQ E+TLDPINCP+HY+CDS Y G+YP   DVLV  +  V+YL
Sbjct: 4   EWEMDSDRKKTFFKCTKWQFEDTLDPINCPFHYFCDSIYAGDYPQITDVLVFFFVTVTYL 63

Query: 71  ATLLLMVVDMVSSRGPASSFSQSKR----FLLPSGPFSLPIILLMLAKGHRINSVFPLSC 126
            TL+++V  ++S R   +           +LLPSGP SLP+I+L+LAKG RIN++FP+S 
Sbjct: 64  TTLIVVVRKVISRRRRENDDDGDDDKARRYLLPSGPISLPLIILILAKGQRINTLFPISI 123

Query: 127 VGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVS 186
            GPAILQLV +S L F+    +   + FFEAST+SGILHASLYLD+VILPYYTGFDALV+
Sbjct: 124 FGPAILQLVQLSVLLFENNIEKEASFVFFEASTISGILHASLYLDAVILPYYTGFDALVT 183

Query: 187 SSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRL--YEANKAKITA 244
           S+FSG C SC+CRKE L+VGGK+V+YRGWS TT LVVG L LRI+ +L   E    ++  
Sbjct: 184 STFSGVCKSCICRKEPLIVGGKIVSYRGWSSTTFLVVGVLFLRIICKLCKEEGINKRVLV 243

Query: 245 IMSLLESLSFIFIIKDSLYLATNSPPEQ-YLLRAAAFGGVFVLICLHLLKKACNKVAQ 301
           + ++++ L+ + +I+D +YLA  SP E+  L R   FG + +LIC++++ K C  V++
Sbjct: 244 VKNVVQGLTLLVLIRDCVYLAVMSPVEEPILFRVFVFGFLLLLICVYVITKVCCLVSR 301

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|29648963|gb|AAO86833.1| hypothetical protein [Arabidopsis thaliana]

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/298 (51%), Positives = 211/298 (70%), Gaps = 8/298 (2%)

Query: 12  EWNLE-DVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYL 70
           EW ++ D + TF KC  WQ E+TLDPINCP+HY+CDS Y G+YP   DVLV  +  V+YL
Sbjct: 4   EWEMDSDRKKTFFKCTKWQFEDTLDPINCPFHYFCDSIYAGDYPQITDVLVFFFVTVTYL 63

Query: 71  ATLLLMVVDMVSSRGPASSFSQSKR----FLLPSGPFSLPIILLMLAKGHRINSVFPLSC 126
            TL+++V  ++S R   +           +LLPSGP SLP+I+L+LAKG RIN++FP+S 
Sbjct: 64  TTLIVVVRKVISRRRRENDDDGDDDKARRYLLPSGPISLPLIILILAKGQRINTLFPISI 123

Query: 127 VGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVS 186
            GPAILQLV +S L F+    +   + FFEAST+SGILHASLYLD+VILPYYTGFDALV+
Sbjct: 124 FGPAILQLVQLSVLLFENNIEKEASFVFFEASTISGILHASLYLDAVILPYYTGFDALVT 183

Query: 187 SSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRL--YEANKAKITA 244
           S+FSG C SC+CRKE L+VGGK+V+YRGWS TT LVVG L LRI+ +L   E    ++  
Sbjct: 184 STFSGVCKSCICRKEPLIVGGKIVSYRGWSSTTFLVVGVLFLRIICKLCKEEGINKRVLV 243

Query: 245 IMSLLESLSFIFIIKDSLYLATNSPPEQ-YLLRAAAFGGVFVLICLHLLKKACNKVAQ 301
           + ++++ L+ + +I+D +YLA  SP E+  L R   FG + +LIC++++ K C  V++
Sbjct: 244 VKNVVQGLTLLVLIRDCVYLAVMSPVEEPILFRVFVFGFLLLLICVYVITKVCCLVSR 301

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438855|ref|XP_003589704.1| hypothetical protein MTR_1g038290 [Medicago truncatula] gi|355478752|gb|AES59955.1| hypothetical protein MTR_1g038290 [Medicago truncatula]

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/297 (48%), Positives = 184/297 (61%), Gaps = 56/297 (18%)

Query: 5   KNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVY 64
           KNP F P W+LE++  TF KC+ WQ +ET D INCPYHY CD TYP N            
Sbjct: 60  KNPTFQPGWDLEEIHATFFKCISWQMQETKDTINCPYHYVCDKTYPPN------------ 107

Query: 65  TAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINSVFPL 124
                                                 + L I +L    G++IN++FPL
Sbjct: 108 --------------------------------------YHLSIDIL----GNQINTIFPL 125

Query: 125 SCVGPAILQLVYISALTFDFGAN-ENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDA 183
           SC+GPAIL LV ISAL+FD  A+ ++I+Y FF ASTVSGILHASLYLDS+ L YYTGFDA
Sbjct: 126 SCIGPAILLLVLISALSFDNEADYKDIQYTFFAASTVSGILHASLYLDSIALAYYTGFDA 185

Query: 184 LVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKAK-I 242
           L+SS+ SGEC +CVCRKE L VGGKLV Y+GWS+TT  V   LCLRI+  ++  N  K +
Sbjct: 186 LMSSTLSGECATCVCRKEALAVGGKLVKYKGWSMTTFFVGSVLCLRIICTIFGENVGKFV 245

Query: 243 TAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKV 299
           + I  L+E  S+I I  D +YL   SPPE+ +LR  AFG +F+LI LH+LK+AC+++
Sbjct: 246 SMIKVLMERFSWILISLDCVYLIAKSPPERVMLRVVAFGCIFLLIVLHVLKEACSQI 302

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
TAIR|locus:2062678	310	AT2G41610 "AT2G41610" [Arabido	0.935	0.935	0.520	2.5e-81

TAIR|locus:2062678 AT2G41610 "AT2G41610" [Arabidopsis thaliana (taxid:3702)]

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 155/298 (52%), Positives = 216/298 (72%)

Query:    12 EWNLE-DVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYL 70
             EW ++ D + TF KC  WQ E+TLDPINCP+HY+CDS Y G+YP   DVLV  +  V+YL
Sbjct:     4 EWEMDSDRKKTFFKCTKWQFEDTLDPINCPFHYFCDSIYAGDYPQITDVLVFFFVTVTYL 63

Query:    71 ATLLLMVVDMVSSRGPASSFS----QSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSC 126
              TL+++V  ++S R   +       +++R+LLPSGP SLP+I+L+LAKG RIN++FP+S 
Sbjct:    64 TTLIVVVRKVISRRRRENDDDGDDDKARRYLLPSGPISLPLIILILAKGQRINTLFPISI 123

Query:   127 VGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVS 186
              GPAILQLV +S L F+    +   + FFEAST+SGILHASLYLD+VILPYYTGFDALV+
Sbjct:   124 FGPAILQLVQLSVLLFENNIEKEASFVFFEASTISGILHASLYLDAVILPYYTGFDALVT 183

Query:   187 SSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLY--EANKAKITA 244
             S+FSG C SC+CRKE L+VGGK+V+YRGWS TT LVVG L LRI+ +L   E    ++  
Sbjct:   184 STFSGVCKSCICRKEPLIVGGKIVSYRGWSSTTFLVVGVLFLRIICKLCKEEGINKRVLV 243

Query:   245 IMSLLESLSFIFIIKDSLYLATNSPPEQYLL-RAAAFGGVFVLICLHLLKKACNKVAQ 301
             + ++++ L+ + +I+D +YLA  SP E+ +L R   FG + +LIC++++ K C  V++
Sbjct:   244 VKNVVQGLTLLVLIRDCVYLAVMSPVEEPILFRVFVFGFLLLLICVYVITKVCCLVSR 301


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      310       310   0.00079  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  219 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.98u 0.11s 26.09t   Elapsed:  00:00:01
  Total cpu time:  25.98u 0.11s 26.09t   Elapsed:  00:00:01
  Start:  Fri May 10 02:04:46 2013   End:  Fri May 10 02:04:47 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00