Citrus Sinensis ID: 021608
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 310 | ||||||
| 255540939 | 395 | conserved hypothetical protein [Ricinus | 0.738 | 0.579 | 0.662 | 3e-84 | |
| 224124154 | 397 | predicted protein [Populus trichocarpa] | 0.748 | 0.584 | 0.659 | 1e-80 | |
| 18394662 | 399 | uncharacterized protein [Arabidopsis tha | 0.745 | 0.578 | 0.601 | 2e-71 | |
| 21617960 | 399 | unknown [Arabidopsis thaliana] | 0.745 | 0.578 | 0.597 | 1e-70 | |
| 356512445 | 399 | PREDICTED: uncharacterized protein LOC10 | 0.745 | 0.578 | 0.575 | 6e-70 | |
| 255635341 | 399 | unknown [Glycine max] | 0.745 | 0.578 | 0.570 | 5e-69 | |
| 297850280 | 399 | hypothetical protein ARALYDRAFT_472110 [ | 0.745 | 0.578 | 0.580 | 4e-68 | |
| 356562814 | 394 | PREDICTED: uncharacterized protein LOC10 | 0.745 | 0.586 | 0.549 | 5e-68 | |
| 449520752 | 393 | PREDICTED: uncharacterized protein LOC10 | 0.748 | 0.590 | 0.557 | 9e-67 | |
| 449448372 | 393 | PREDICTED: uncharacterized protein LOC10 | 0.748 | 0.590 | 0.549 | 6e-66 |
| >gi|255540939|ref|XP_002511534.1| conserved hypothetical protein [Ricinus communis] gi|223550649|gb|EEF52136.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/231 (66%), Positives = 190/231 (82%), Gaps = 2/231 (0%)
Query: 1 MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
M+LL+VITKA + + P Q E+PI+LN D++FLNLK E + +SL +PV+GWQ++E
Sbjct: 1 MSLLDVITKAASVNVEP--QSEYPIVLNSDDVFLNLKANAETPNPSSLASPVTGWQLAET 58
Query: 61 DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
D +LI+ GKKF+ KLKRKLKD N+F+KDEF GILNP+L+K+GEK+GIS ++ SD+GYTQ
Sbjct: 59 DVHLIELGKKFYCKLKRKLKDINHFNKDEFFGILNPFLEKMGEKIGISVGVSSSDNGYTQ 118
Query: 121 GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL 180
LIEK+GFLMGRDV LVLEAC+SL IW+LVETLI+ GLVD+S YSNLV L KRSDL
Sbjct: 119 VLIEKIGFLMGRDVTGLVLEACLSLEIWDLVETLIIKGLVDYSCYSNLVKNLVANKRSDL 178
Query: 181 LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEK 231
LCL +K++PDLG SELLCILKYFLCP K+AY +M +VR EWESQALLAIEK
Sbjct: 179 LCLSIKHAPDLGLSELLCILKYFLCPSKEAYSAMANVRKEWESQALLAIEK 229
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124154|ref|XP_002330118.1| predicted protein [Populus trichocarpa] gi|222871252|gb|EEF08383.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|18394662|ref|NP_564065.1| uncharacterized protein [Arabidopsis thaliana] gi|6730701|gb|AAF27096.1|AC011809_5 Unknown protein [Arabidopsis thaliana] gi|15810347|gb|AAL07061.1| unknown protein [Arabidopsis thaliana] gi|20465593|gb|AAM20279.1| unknown protein [Arabidopsis thaliana] gi|332191650|gb|AEE29771.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|21617960|gb|AAM67010.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356512445|ref|XP_003524929.1| PREDICTED: uncharacterized protein LOC100817544 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255635341|gb|ACU18024.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|297850280|ref|XP_002893021.1| hypothetical protein ARALYDRAFT_472110 [Arabidopsis lyrata subsp. lyrata] gi|297338863|gb|EFH69280.1| hypothetical protein ARALYDRAFT_472110 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356562814|ref|XP_003549663.1| PREDICTED: uncharacterized protein LOC100806052 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449520752|ref|XP_004167397.1| PREDICTED: uncharacterized protein LOC101225330 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449448372|ref|XP_004141940.1| PREDICTED: uncharacterized protein LOC101222166 [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 310 | ||||||
| TAIR|locus:2034969 | 399 | AT1G18850 "AT1G18850" [Arabido | 0.745 | 0.578 | 0.559 | 2.5e-83 |
| TAIR|locus:2034969 AT1G18850 "AT1G18850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 628 (226.1 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 132/236 (55%), Positives = 163/236 (69%)
Query: 1 MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
MTLLE I+ AVAN + SQ ++PI L+ D IF NLKP+LE + +LVNP+SGW ISE
Sbjct: 1 MTLLEAISNAVANQDKVDSQSDYPIPLSHDGIFANLKPKLENPNLGTLVNPISGWGISES 60
Query: 61 DTYLIDSGXXXXXXXXXXXXDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
D +ID G DTN F KDEF+ +L +L+KIGEKVGIS + G
Sbjct: 61 DVEVIDLGKKFSSKLKRKLKDTNGFVKDEFVKMLKQFLEKIGEKVGISEAESEMVLGDQA 120
Query: 121 G-----LIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATE 175
G L+EK GFLMGRDV+ LVL+ CISL +WELVE LI + LVDHSSYS LV+ L +
Sbjct: 121 GSEIQILVEKNGFLMGRDVSGLVLKGCISLEMWELVEILISNSLVDHSSYSYLVSNLVEK 180
Query: 176 KRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEK 231
+RSDLLC+ +K + DLG++ELL ILKYFLCP K+A +M VR EWESQA+LAIEK
Sbjct: 181 QRSDLLCVVIKEASDLGATELLSILKYFLCPSKEAISTMAKVREEWESQAMLAIEK 236
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.01290009 | hypothetical protein (397 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00