Citrus Sinensis ID: 021899

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
MYIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA
ccccccccccEEEEcccccccccccccEEEEEcccEEEEccEEEEEEccccccccccccccccEEEEcccccccHHHHHHHHcccccEEEEccccccccEEEEEcccccccccccEEEcccccccccHHHHHHHcccccccccccHHHEEcccccccccccccccccccccccccccccccHHHHHHccccccccccccEEEccccccccEEEEEEEEccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHccc
cccEEEcHHHHHHHHHcccccccccccEEEEcEccEEEEccEEEEEEccccHHHccHHHHcccEEEEcccccccHHHHHHHHcccccEEEEccccccccEccccccHHHccccccEEEcccHHHHHHHHHHHHHHHHHcEEEEEEEEEEccccccEccccccccccHHHcEcccccEEEcccHHHHHHHHcHHHcccEEEEEEEccccccEEEEEEEEEcccccHHHHHHHHHHHHHccccccEEEEcccccHHHHccccccEEEEHHHcEEEEccEEEEEEEEcccHHHHHHHHHHHHHHHHHHc
MYIVYFEINMQTYMFKYDsvhgqwkhnelkvkdektllfgekpvavfgfrnpeeipwaktgAEYVVEstgvftdkdKAAAHLKGGAKKVVisapskdapmfvvgvnekeykpeldivsnascttnclaPLAKVIHDKFGIVEGLMTTVHSITatqktvdgpsmkdwrggraasfniipsstgaaKAVGKVlpalngkltgmsfrvptvdvSVVDLTVRLEKEATYEEIKNAIKEESEGKLKgilgyteedvvstdfvgdsrssifdaKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA
MYIVYFEINMQTYMFKYDSVHGQWKHNElkvkdektlLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKvvisapskdaPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSItatqktvdgpsmkDWRGGRAASFNIIPSSTGAAKAVGKVLPALNgkltgmsfrvptvdvsvVDLTVrlekeatyeeiknaikeesegklkGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA
MYIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTdkdkaaahlkggakkVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA
*YIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDG**MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIK****GKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHM*****
MYIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT**
MYIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA
MYIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA
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MYIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query306 2.2.26 [Sep-21-2011]
P25858338 Glyceraldehyde-3-phosphat yes no 0.977 0.884 0.906 1e-159
P09094326 Glyceraldehyde-3-phosphat N/A no 0.973 0.914 0.906 1e-159
P34783360 Glyceraldehyde-3-phosphat N/A no 0.986 0.838 0.890 1e-159
P04796338 Glyceraldehyde-3-phosphat N/A no 0.977 0.884 0.889 1e-157
P25861337 Glyceraldehyde-3-phosphat N/A no 0.983 0.893 0.893 1e-157
Q9FX54338 Glyceraldehyde-3-phosphat yes no 0.977 0.884 0.889 1e-157
P34921338 Glyceraldehyde-3-phosphat N/A no 0.980 0.887 0.88 1e-156
Q42671337 Glyceraldehyde-3-phosphat N/A no 0.983 0.893 0.867 1e-155
P26518341 Glyceraldehyde-3-phosphat N/A no 0.983 0.882 0.877 1e-154
Q7FAH2337 Glyceraldehyde-3-phosphat yes no 0.983 0.893 0.870 1e-154
>sp|P25858|G3PC1_ARATH Glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic OS=Arabidopsis thaliana GN=GAPC1 PE=1 SV=2 Back     alignment and function desciption
 Score =  561 bits (1447), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 271/299 (90%), Positives = 284/299 (94%)

Query: 5   YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEY 64
           +      TYMFKYDSVHGQWKHNELK+KDEKTLLFGEKPV VFG RNPE+IPWA+ GA+Y
Sbjct: 39  FITTEYMTYMFKYDSVHGQWKHNELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADY 98

Query: 65  VVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTT 124
           VVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNE EYK +LDIVSNASCTT
Sbjct: 99  VVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTT 158

Query: 125 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAA 184
           NCLAPLAKVI+D+FGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAA
Sbjct: 159 NCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAA 218

Query: 185 KAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGIL 244
           KAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEK ATY+EIK AIKEESEGKLKGIL
Sbjct: 219 KAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKGIL 278

Query: 245 GYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAK 303
           GYTE+DVVSTDFVGD+RSSIFDAKAGIALS  FVKLVSWYDNEWGYSSRV+DLIVHM+K
Sbjct: 279 GYTEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHMSK 337

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 2
>sp|P09094|G3PC_TOBAC Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1 Back     alignment and function description
>sp|P34783|G3P_ATRNU Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1 Back     alignment and function description
>sp|P04796|G3PC_SINAL Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2 Back     alignment and function description
>sp|P25861|G3PC_ANTMA Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1 Back     alignment and function description
>sp|Q9FX54|G3PC2_ARATH Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic OS=Arabidopsis thaliana GN=GAPC2 PE=1 SV=1 Back     alignment and function description
>sp|P34921|G3PC_DIACA Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1 Back     alignment and function description
>sp|Q42671|G3PC_CRAPL Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1 Back     alignment and function description
>sp|P26518|G3PC_MAGLI Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1 Back     alignment and function description
>sp|Q7FAH2|G3PC2_ORYSJ Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query306
418731090337 glyceraldehyde 3-phosphate dehydrogenase 0.983 0.893 0.900 1e-160
386870483337 glyceraldehyde 3-phosphate dehydrogenase 0.973 0.884 0.912 1e-159
4539543337 glyceraldehyde-3-phosphate dehydrogenase 0.983 0.893 0.900 1e-159
224110772341 predicted protein [Populus trichocarpa] 0.986 0.885 0.900 1e-159
74419004341 glyceraldehyde-3-phosphate dehydrogenase 0.986 0.885 0.900 1e-159
157042763340 glyceraldehyde 3-phosphate dehydrogenase 0.973 0.876 0.912 1e-158
257815169337 NAD-dependent glyceraldehyde 3-P dehydro 0.983 0.893 0.893 1e-158
297828898338 glyceraldehyde-3-phosphate dehydrogenase 0.977 0.884 0.906 1e-157
15229231338 glyceraldehyde-3-phosphate dehydrogenase 0.977 0.884 0.906 1e-157
166706338 cystolic glyceraldehyde-3-phosphate dehy 0.977 0.884 0.906 1e-157
>gi|418731090|gb|AFX67011.1| glyceraldehyde 3-phosphate dehydrogenase [Solanum tuberosum] Back     alignment and taxonomy information
 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 271/301 (90%), Positives = 291/301 (96%)

Query: 5   YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEY 64
           +  ++  TYMFKYDSVHGQWKH+ELKVKDEKTLLFGEK V VFGFRNPEEIPWA+TGA+Y
Sbjct: 37  FISVDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKAVTVFGFRNPEEIPWAQTGADY 96

Query: 65  VVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTT 124
           +VESTGVFTDKDKAAAHLKGGAKKV+ISAPSKDAPMFVVGVNEKEYKPEL+IVSNASCTT
Sbjct: 97  IVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKPELNIVSNASCTT 156

Query: 125 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAA 184
           NCLAPLAKVI+D+FGIVEGLMTTVHSITATQKTVDGPS KDWRGGRAASFNIIPSSTGAA
Sbjct: 157 NCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAA 216

Query: 185 KAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGIL 244
           KAVGKVLPALNGKLTGM+FRVPTVDVSVVDLTVRLEKEATY+EIK AIKEESEGKLKGIL
Sbjct: 217 KAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEATYDEIKAAIKEESEGKLKGIL 276

Query: 245 GYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304
           GYTE+DVVSTDFVGD+RSSIFDAKAGIALSKNFVKLV+WYDNEWGYS+RV+DLI+HM+  
Sbjct: 277 GYTEDDVVSTDFVGDNRSSIFDAKAGIALSKNFVKLVAWYDNEWGYSTRVVDLIIHMSSV 336

Query: 305 Q 305
           Q
Sbjct: 337 Q 337

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|386870483|gb|AFJ42572.1| glyceraldehyde 3-phosphate dehydrogenase [Sesamum indicum] Back     alignment and taxonomy information
>gi|4539543|emb|CAB39974.1| glyceraldehyde-3-phosphate dehydrogenase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|224110772|ref|XP_002315632.1| predicted protein [Populus trichocarpa] gi|118481113|gb|ABK92510.1| unknown [Populus trichocarpa] gi|118486257|gb|ABK94970.1| unknown [Populus trichocarpa] gi|222864672|gb|EEF01803.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|74419004|gb|ABA03227.1| glyceraldehyde-3-phosphate dehydrogenase [Populus maximowiczii x Populus nigra] Back     alignment and taxonomy information
>gi|157042763|gb|ABV02033.1| glyceraldehyde 3-phosphate dehydrogenase [Nicotiana langsdorffii x Nicotiana sanderae] Back     alignment and taxonomy information
>gi|257815169|gb|ACV69976.1| NAD-dependent glyceraldehyde 3-P dehydrogenase [Solanum chacoense] Back     alignment and taxonomy information
>gi|297828898|ref|XP_002882331.1| glyceraldehyde-3-phosphate dehydrogenase C subunit [Arabidopsis lyrata subsp. lyrata] gi|297328171|gb|EFH58590.1| glyceraldehyde-3-phosphate dehydrogenase C subunit [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15229231|ref|NP_187062.1| glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Arabidopsis thaliana] gi|20455492|sp|P25858.2|G3PC1_ARATH RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic gi|6721173|gb|AAF26801.1|AC016829_25 glyceraldehyde-3-phosphate dehydrogenase C subunit (GapC) [Arabidopsis thaliana] gi|15529286|gb|AAK97737.1| AT3g04120/T6K12_26 [Arabidopsis thaliana] gi|16974417|gb|AAL31134.1| AT3g04120/T6K12_26 [Arabidopsis thaliana] gi|22655270|gb|AAM98225.1| unknown protein [Arabidopsis thaliana] gi|110741920|dbj|BAE98901.1| glyceraldehyde-3-phosphate dehydrogenase C subunit [Arabidopsis thaliana] gi|332640518|gb|AEE74039.1| glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|166706|gb|AAA32794.1| cystolic glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] gi|166710|gb|AAA32796.1| glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query306
TAIR|locus:2103085338 GAPC1 "glyceraldehyde-3-phosph 0.954 0.863 0.876 2.3e-135
TAIR|locus:2010007338 GAPC2 "glyceraldehyde-3-phosph 0.954 0.863 0.859 3e-133
TAIR|locus:2032810420 GAPCP-2 "glyceraldehyde-3-phos 0.983 0.716 0.708 1.8e-110
TAIR|locus:2206435422 GAPCP-1 "glyceraldehyde-3-phos 0.983 0.713 0.705 7.8e-110
UNIPROTKB|P80534363 P80534 "Glyceraldehyde-3-phosp 0.977 0.823 0.641 6.5e-106
CGD|CAL0005657335 TDH3 [Candida albicans (taxid: 0.954 0.871 0.687 3.2e-104
UNIPROTKB|Q5ADM7335 TDH3 "Glyceraldehyde-3-phospha 0.954 0.871 0.687 3.2e-104
ASPGD|ASPL0000009927336 gpdA [Emericella nidulans (tax 0.980 0.892 0.652 1.4e-103
UNIPROTKB|G4NCH2336 MGG_01084 "Glyceraldehyde-3-ph 0.970 0.883 0.665 4.2e-102
UNIPROTKB|Q5R2J2333 GAPDH "Glyceraldehyde-3-phosph 0.977 0.897 0.654 6.9e-102
TAIR|locus:2103085 GAPC1 "glyceraldehyde-3-phosphate dehydrogenase C subunit 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1326 (471.8 bits), Expect = 2.3e-135, P = 2.3e-135
 Identities = 256/292 (87%), Positives = 268/292 (91%)

Query:    12 TYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGV 71
             TYMFKYDSVHGQWKHNELK+KDEKTLLFGEKPV VFG RNPE+IPWA+ GA+YVVESTGV
Sbjct:    46 TYMFKYDSVHGQWKHNELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGV 105

Query:    72 FTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLA 131
             FT               VVISAPSKDAPMFVVGVNE EYK +LDIVSNASCTTNCLAPLA
Sbjct:   106 FTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLA 165

Query:   132 KVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL 191
             KVI+D+FGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL
Sbjct:   166 KVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL 225

Query:   192 PALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDV 251
             PALNGKLTGMSFRVPTVDVSVVDLTVRLEK ATY+EIK AIKEESEGKLKGILGYTE+DV
Sbjct:   226 PALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDV 285

Query:   252 VSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAK 303
             VSTDFVGD+RSSIFDAKAGIALS  FVKLVSWYDNEWGYSSRV+DLIVHM+K
Sbjct:   286 VSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHMSK 337
GO:0000166 "nucleotide binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006006 "glucose metabolic process" evidence=IEA
GO:0006096 "glycolysis" evidence=ISS;RCA;IDA;TAS
GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA
GO:0050661 "NADP binding" evidence=IEA
GO:0051287 "NAD binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005739 "mitochondrion" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IEP;IDA
GO:0005740 "mitochondrial envelope" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA;TAS
GO:0006094 "gluconeogenesis" evidence=RCA;TAS
GO:0042542 "response to hydrogen peroxide" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP;RCA
GO:0009507 "chloroplast" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0008886 "glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity" evidence=IDA
GO:0010154 "fruit development" evidence=IMP
GO:0048316 "seed development" evidence=IMP
GO:0005507 "copper ion binding" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=RCA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009060 "aerobic respiration" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0004365 "glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity" evidence=TAS
GO:0009408 "response to heat" evidence=IEP
GO:0009744 "response to sucrose stimulus" evidence=IEP
TAIR|locus:2010007 GAPC2 "glyceraldehyde-3-phosphate dehydrogenase C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032810 GAPCP-2 "glyceraldehyde-3-phosphate dehydrogenase of plastid 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206435 GAPCP-1 "glyceraldehyde-3-phosphate dehydrogenase of plastid 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P80534 P80534 "Glyceraldehyde-3-phosphate dehydrogenase, muscle" [Jaculus orientalis (taxid:48868)] Back     alignment and assigned GO terms
CGD|CAL0005657 TDH3 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ADM7 TDH3 "Glyceraldehyde-3-phosphate dehydrogenase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ASPGD|ASPL0000009927 gpdA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NCH2 MGG_01084 "Glyceraldehyde-3-phosphate dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R2J2 GAPDH "Glyceraldehyde-3-phosphate dehydrogenase" [Pelodiscus sinensis (taxid:13735)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P34923G3PC_PHYPA1, ., 2, ., 1, ., 1, 20.80820.95090.8508N/Ano
Q7FAH2G3PC2_ORYSJ1, ., 2, ., 1, ., 1, 20.87040.98360.8931yesno
Q42671G3PC_CRAPL1, ., 2, ., 1, ., 1, 20.86710.98360.8931N/Ano
P08477G3PC2_HORVU1, ., 2, ., 1, ., 1, 20.84710.98360.9868N/Ano
P0CN74G3P_CRYNJ1, ., 2, ., 1, ., 1, 20.71610.98030.8849yesno
P0CN75G3P_CRYNB1, ., 2, ., 1, ., 1, 20.71610.98030.8849N/Ano
P29497G3P_COCHE1, ., 2, ., 1, ., 1, 20.70900.97050.8813N/Ano
P04796G3PC_SINAL1, ., 2, ., 1, ., 1, 20.88960.97710.8846N/Ano
A2YQT7G3PC_ORYSI1, ., 2, ., 1, ., 1, 20.84050.98360.8931N/Ano
P53430G3P_MONPU1, ., 2, ., 1, ., 1, 20.70190.98030.8902N/Ano
P17730G3P2_TRIKO1, ., 2, ., 1, ., 1, 20.69200.98030.8875N/Ano
P09317G3P_USTMA1, ., 2, ., 1, ., 1, 20.70230.97050.8813N/Ano
Q12552G3P_ASPNG1, ., 2, ., 1, ., 1, 20.68870.98030.8928yesno
Q00640G3P_ERYGR1, ., 2, ., 1, ., 1, 20.68790.96730.8757N/Ano
P26518G3PC_MAGLI1, ., 2, ., 1, ., 1, 20.87780.98360.8826N/Ano
P26519G3PC_PETCR1, ., 2, ., 1, ., 1, 20.86570.97380.8869N/Ano
Q9HFX1G3P_AJECA1, ., 2, ., 1, ., 1, 20.67880.98030.8902N/Ano
P26517G3PC1_HORVU1, ., 2, ., 1, ., 1, 20.83380.98360.8931N/Ano
Q43247G3PC3_MAIZE1, ., 2, ., 1, ., 1, 20.85380.98360.8931N/Ano
P34783G3P_ATRNU1, ., 2, ., 1, ., 1, 20.89070.98690.8388N/Ano
Q9HGY7G3P_ASPOR1, ., 2, ., 1, ., 1, 20.68660.97050.8786yesno
Q8X1X3G3P_PARBA1, ., 2, ., 1, ., 1, 20.67880.98360.8905N/Ano
P34924G3PC_PINSY1, ., 2, ., 1, ., 1, 20.85040.98360.8852N/Ano
P34922G3PC_PEA1, ., 2, ., 1, ., 1, 20.86620.97710.8846N/Ano
Q9FX54G3PC2_ARATH1, ., 2, ., 1, ., 1, 20.88960.97710.8846yesno
P34921G3PC_DIACA1, ., 2, ., 1, ., 1, 20.880.98030.8875N/Ano
Q9UR38G3P_LENED1, ., 2, ., 1, ., 1, 20.69230.97050.8813N/Ano
Q5R2J2G3P_PELSI2, ., 6, ., 9, 9, ., -0.68770.97710.8978N/Ano
Q8NK47G3P_RHIMI1, ., 2, ., 1, ., 1, 20.70900.96730.8809N/Ano
Q0J8A4G3PC1_ORYSJ1, ., 2, ., 1, ., 1, 20.84050.98360.8931nono
P25861G3PC_ANTMA1, ., 2, ., 1, ., 1, 20.89360.98360.8931N/Ano
P09094G3PC_TOBAC1, ., 2, ., 1, ., 1, 20.90600.97380.9141N/Ano
Q96UF2G3P2_MUCCL1, ., 2, ., 1, ., 1, 20.71420.95420.8639N/Ano
Q09054G3PC2_MAIZE1, ., 2, ., 1, ., 1, 20.83380.98360.8931N/Ano
Q6CCU7G3P_YARLI1, ., 2, ., 1, ., 1, 20.71280.98030.8875yesno
P56649G3P_PANVR1, ., 2, ., 1, ., 1, 20.68870.98030.9009N/Ano
Q39769G3PC_GINBI1, ., 2, ., 1, ., 1, 20.86660.98030.8823N/Ano
Q6K5G8G3PC3_ORYSJ1, ., 2, ., 1, ., 1, 20.86370.98360.8931nono
Q41595G3PC_TAXBA1, ., 2, ., 1, ., 1, 20.89410.95750.8617N/Ano
P26521G3PC_RANAC1, ., 2, ., 1, ., 1, 20.86040.98360.8905N/Ano
P26520G3PC_PETHY1, ., 2, ., 1, ., 1, 20.86370.98360.8931N/Ano
P28844G3P_COCLU1, ., 2, ., 1, ., 1, 20.70230.97050.8813N/Ano
P20445G3P_EMENI1, ., 2, ., 1, ., 1, 20.68870.98030.8928yesno
Q6BMK0G3P_DEBHA1, ., 2, ., 1, ., 1, 20.73190.94440.8626yesno
P17878G3PC_MESCR1, ., 2, ., 1, ., 1, 20.84380.98360.8931N/Ano
P00357G3P_HOMAM1, ., 2, ., 1, ., 1, 20.69200.98030.9009N/Ano
Q96UF1G3P3_MUCCL1, ., 2, ., 1, ., 1, 20.70230.96730.8731N/Ano
Q9P8C0G3P_PHANO1, ., 2, ., 1, ., 1, 20.70560.97050.8813N/Ano
P08735G3PC1_MAIZE1, ., 2, ., 1, ., 1, 20.83050.98360.8931N/Ano
P25858G3PC1_ARATH1, ., 2, ., 1, ., 1, 20.90630.97710.8846yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.2.1.120.979
3rd Layer1.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_X0484
SubName- Full=Putative uncharacterized protein; (341 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.00080776
RecName- Full=Phosphoglycerate kinase; EC=2.7.2.3; (402 aa)
•  • •• 0.955
grail3.0154005402
phosphoglycerate kinase (EC-2.7.7.2 2.7.2.3) (402 aa)
•  • •• 0.954
estExt_fgenesh4_pm.C_LG_VIII0335
phosphoglycerate kinase (481 aa)
•  • •• 0.945
estExt_fgenesh4_pm.C_LG_X0655
phosphoglycerate kinase (481 aa)
•  • •• 0.944
estExt_Genewise1_v1.C_LG_IV0988
hypothetical protein (256 aa)
••   •• 0.928
grail3.0049021504
RecName- Full=Triosephosphate isomerase; EC=5.3.1.1; (254 aa)
••   •• 0.927
estExt_fgenesh4_pg.C_LG_I1744
triose-phosphate isomerase (EC-5.3.1.1) (255 aa)
••   •• 0.927
estExt_Genewise1_v1.C_LG_X2172
RecName- Full=Triosephosphate isomerase; EC=5.3.1.1; (256 aa)
••   •• 0.925
eugene3.00091331
RecName- Full=Triosephosphate isomerase; EC=5.3.1.1; (264 aa)
••   •• 0.921
estExt_Genewise1_v1.C_LG_IX1362
RecName- Full=Triosephosphate isomerase; EC=5.3.1.1; (315 aa)
••   •• 0.911

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query306
PLN02358338 PLN02358, PLN02358, glyceraldehyde-3-phosphate deh 0.0
PLN02272421 PLN02272, PLN02272, glyceraldehyde-3-phosphate deh 0.0
TIGR01534326 TIGR01534, GAPDH-I, glyceraldehyde-3-phosphate deh 1e-158
PTZ00023337 PTZ00023, PTZ00023, glyceraldehyde-3-phosphate deh 1e-158
COG0057335 COG0057, GapA, Glyceraldehyde-3-phosphate dehydrog 1e-157
PRK15425331 PRK15425, gapA, glyceraldehyde-3-phosphate dehydro 1e-129
PTZ00434361 PTZ00434, PTZ00434, cytosolic glyceraldehyde 3-pho 1e-126
PRK07729343 PRK07729, PRK07729, glyceraldehyde-3-phosphate deh 1e-115
PRK07403337 PRK07403, PRK07403, glyceraldehyde-3-phosphate deh 1e-104
PLN03096395 PLN03096, PLN03096, glyceraldehyde-3-phosphate deh 1e-102
PLN02237442 PLN02237, PLN02237, glyceraldehyde-3-phosphate deh 1e-102
pfam02800157 pfam02800, Gp_dh_C, Glyceraldehyde 3-phosphate deh 1e-95
PRK08955334 PRK08955, PRK08955, glyceraldehyde-3-phosphate deh 1e-84
PRK08289477 PRK08289, PRK08289, glyceraldehyde-3-phosphate deh 2e-82
PRK13535336 PRK13535, PRK13535, erythrose 4-phosphate dehydrog 6e-79
TIGR01532325 TIGR01532, E4PD_g-proteo, erythrose-4-phosphate de 1e-72
PTZ00353342 PTZ00353, PTZ00353, glycosomal glyceraldehyde-3-ph 1e-48
pfam00044148 pfam00044, Gp_dh_N, Glyceraldehyde 3-phosphate deh 9e-48
smart00846149 smart00846, Gp_dh_N, Glyceraldehyde 3-phosphate de 1e-45
COG0136334 COG0136, Asd, Aspartate-semialdehyde dehydrogenase 9e-09
TIGR01296338 TIGR01296, asd_B, aspartate-semialdehyde dehydroge 2e-05
TIGR00978341 TIGR00978, asd_EA, aspartate-semialdehyde dehydrog 0.003
>gnl|CDD|165999 PLN02358, PLN02358, glyceraldehyde-3-phosphate dehydrogenase Back     alignment and domain information 
 Score =  540 bits (1392), Expect = 0.0
 Identities = 267/292 (91%), Positives = 282/292 (96%)

Query: 12  TYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGV 71
           TYMFKYDSVHGQWKH+ELKVKD+KTLLFGEKPV VFG RNPE+IPW + GA++VVESTGV
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGV 105

Query: 72  FTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLA 131
           FTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNE EYK +LDIVSNASCTTNCLAPLA
Sbjct: 106 FTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLA 165

Query: 132 KVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL 191
           KVI+D+FGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL
Sbjct: 166 KVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL 225

Query: 192 PALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDV 251
           P+LNGKLTGMSFRVPTVDVSVVDLTVRLEK ATY+EIK AIKEESEGKLKGILGYTE+DV
Sbjct: 226 PSLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDV 285

Query: 252 VSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAK 303
           VSTDFVGD+RSSIFDAKAGIALS  FVKLVSWYDNEWGYSSRV+DLIVHM+K
Sbjct: 286 VSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHMSK 337

Length = 338
>gnl|CDD|177912 PLN02272, PLN02272, glyceraldehyde-3-phosphate dehydrogenase Back     alignment and domain information
>gnl|CDD|233453 TIGR01534, GAPDH-I, glyceraldehyde-3-phosphate dehydrogenase, type I Back     alignment and domain information
>gnl|CDD|173322 PTZ00023, PTZ00023, glyceraldehyde-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|223135 COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185323 PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase A; Provisional Back     alignment and domain information
>gnl|CDD|185614 PTZ00434, PTZ00434, cytosolic glyceraldehyde 3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|236079 PRK07729, PRK07729, glyceraldehyde-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|180962 PRK07403, PRK07403, glyceraldehyde-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|215572 PLN03096, PLN03096, glyceraldehyde-3-phosphate dehydrogenase A; Provisional Back     alignment and domain information
>gnl|CDD|215131 PLN02237, PLN02237, glyceraldehyde-3-phosphate dehydrogenase B Back     alignment and domain information
>gnl|CDD|217235 pfam02800, Gp_dh_C, Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Back     alignment and domain information
>gnl|CDD|169599 PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|236219 PRK08289, PRK08289, glyceraldehyde-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|184122 PRK13535, PRK13535, erythrose 4-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|130595 TIGR01532, E4PD_g-proteo, erythrose-4-phosphate dehydrogenase Back     alignment and domain information
>gnl|CDD|173546 PTZ00353, PTZ00353, glycosomal glyceraldehyde-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|215675 pfam00044, Gp_dh_N, Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Back     alignment and domain information
>gnl|CDD|214851 smart00846, Gp_dh_N, Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Back     alignment and domain information
>gnl|CDD|223214 COG0136, Asd, Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233347 TIGR01296, asd_B, aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) Back     alignment and domain information
>gnl|CDD|233220 TIGR00978, asd_EA, aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 306
PTZ00434361 cytosolic glyceraldehyde 3-phosphate dehydrogenase 100.0
PRK15425331 gapA glyceraldehyde-3-phosphate dehydrogenase A; P 100.0
PTZ00023337 glyceraldehyde-3-phosphate dehydrogenase; Provisio 100.0
PRK07403337 glyceraldehyde-3-phosphate dehydrogenase; Reviewed 100.0
PLN02272421 glyceraldehyde-3-phosphate dehydrogenase 100.0
PLN02358338 glyceraldehyde-3-phosphate dehydrogenase 100.0
PLN02237442 glyceraldehyde-3-phosphate dehydrogenase B 100.0
PLN03096395 glyceraldehyde-3-phosphate dehydrogenase A; Provis 100.0
PRK07729343 glyceraldehyde-3-phosphate dehydrogenase; Validate 100.0
PRK08955334 glyceraldehyde-3-phosphate dehydrogenase; Validate 100.0
PRK13535336 erythrose 4-phosphate dehydrogenase; Provisional 100.0
PTZ00353342 glycosomal glyceraldehyde-3-phosphate dehydrogenas 100.0
TIGR01534327 GAPDH-I glyceraldehyde-3-phosphate dehydrogenase, 100.0
PRK08289477 glyceraldehyde-3-phosphate dehydrogenase; Reviewed 100.0
COG0057335 GapA Glyceraldehyde-3-phosphate dehydrogenase/eryt 100.0
TIGR01532325 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas 100.0
KOG0657285 consensus Glyceraldehyde 3-phosphate dehydrogenase 100.0
PF02800157 Gp_dh_C: Glyceraldehyde 3-phosphate dehydrogenase, 100.0
TIGR01546333 GAPDH-II_archae glyceraldehyde-3-phosphate dehydro 100.0
PRK06901322 aspartate-semialdehyde dehydrogenase; Provisional 100.0
COG0136334 Asd Aspartate-semialdehyde dehydrogenase [Amino ac 100.0
TIGR01745366 asd_gamma aspartate-semialdehyde dehydrogenase, ga 100.0
PRK04207341 glyceraldehyde-3-phosphate dehydrogenase; Provisio 100.0
TIGR01296339 asd_B aspartate-semialdehyde dehydrogenase (peptid 100.0
PRK06728347 aspartate-semialdehyde dehydrogenase; Provisional 100.0
PRK14874334 aspartate-semialdehyde dehydrogenase; Provisional 100.0
PRK06598369 aspartate-semialdehyde dehydrogenase; Reviewed 100.0
PF00044151 Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase, 100.0
smart00846149 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, 100.0
PRK08040336 putative semialdehyde dehydrogenase; Provisional 99.97
PRK05671336 aspartate-semialdehyde dehydrogenase; Reviewed 99.96
PLN02383344 aspartate semialdehyde dehydrogenase 99.96
TIGR00978341 asd_EA aspartate-semialdehyde dehydrogenase (non-p 99.94
PRK08664349 aspartate-semialdehyde dehydrogenase; Reviewed 99.93
PRK00436343 argC N-acetyl-gamma-glutamyl-phosphate reductase; 99.89
TIGR01850346 argC N-acetyl-gamma-glutamyl-phosphate reductase, 99.86
PLN02968381 Probable N-acetyl-gamma-glutamyl-phosphate reducta 99.84
KOG4777361 consensus Aspartate-semialdehyde dehydrogenase [Am 99.81
PRK11863313 N-acetyl-gamma-glutamyl-phosphate reductase; Provi 99.75
TIGR01851310 argC_other N-acetyl-gamma-glutamyl-phosphate reduc 99.68
PF02774184 Semialdhyde_dhC: Semialdehyde dehydrogenase, dimer 99.32
PRK08300302 acetaldehyde dehydrogenase; Validated 99.29
TIGR03215285 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati 98.9
COG0002349 ArgC Acetylglutamate semialdehyde dehydrogenase [A 98.84
PF01118121 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi 97.75
KOG4354340 consensus N-acetyl-gamma-glutamyl-phosphate reduct 97.2
smart00859122 Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin 96.15
COG4569310 MhpF Acetaldehyde dehydrogenase (acetylating) [Sec 93.66
PF03447117 NAD_binding_3: Homoserine dehydrogenase, NAD bindi 82.77
>PTZ00434 cytosolic glyceraldehyde 3-phosphate dehydrogenase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.8e-110  Score=791.19  Aligned_cols=300  Identities=58%  Similarity=0.947  Sum_probs=289.9

Q ss_pred             cCCChhHHhhhhhcccccccCCCccEEE--------eCceeEEECCEeEEEE-eccCCCCCCCccCCccEEEEecCCCCC
Q 021899            4 VYFEINMQTYMFKYDSVHGQWKHNELKV--------KDEKTLLFGEKPVAVF-GFRNPEEIPWAKTGAEYVVESTGVFTD   74 (306)
Q Consensus         4 ~~~~~~~~ayll~yDS~hg~~~~~~v~~--------~~g~~l~~~g~~i~v~-~~~~~~~~~w~~~gvdiV~e~tG~~~s   74 (306)
                      |++++++|+|||||||+||+|+ ++|++        +++ .|.+||++|.++ +++||+++||+++|+|||+||||.|.+
T Consensus        40 ~~~~~~~~ayLlkyDS~hG~~~-~~v~~~~~~~~~~~~~-~l~ing~~I~~~~~~~dP~~ipW~~~gvD~ViE~TG~f~t  117 (361)
T PTZ00434         40 MSTNAEYFAYQMKYDTVHGRPK-YTVETTKSSPSVKTDD-VLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTD  117 (361)
T ss_pred             CCCChhheeeeeeeecCCCCcC-CceeecccccccccCC-EEEECCEEEEEEEecCChhhCchhhcCCCEEEeCceeecc
Confidence            5689999999999999999999 89998        666 999999999986 999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEeeCCCCC-CCeEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHH-hhhcCeeEEEEeeeecc
Q 021899           75 KDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSI  151 (306)
Q Consensus        75 ~e~a~~h~~aGakkvvIsaps~d-~p~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L-~~~fgI~~~~~tT~ha~  151 (306)
                      ++.+++|+++||||||||+|++| .|+||+|||++.|++ .++||||+|||||||||++|+| ||+|||++++|||+|||
T Consensus       118 ~~~a~~Hl~~GAKkViiSAP~~d~~~t~V~GVN~~~y~~~~~~IiSnASCTTNcLAP~~kvL~~~~fGI~~g~mTTVHay  197 (361)
T PTZ00434        118 KLAAEGHLKGGAKKVVISAPASGGAKTIVMGVNQHEYSPTEHHVVSNASCTTNCLAPIVHVLTKEGFGIETGLMTTIHSY  197 (361)
T ss_pred             HHHHhhhhhcCCCEEEECCCCCCCCceEEEcCChHHcCcccCcEEECCChHHHhhHHHHHHhhcCCcceEEEEEEEEecc
Confidence            99999999999999999999987 689999999999997 5889999999999999999999 79999999999999999


Q ss_pred             CCccccccCCCccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHH
Q 021899          152 TATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNA  231 (306)
Q Consensus       152 t~~q~~~D~~~~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~  231 (306)
                      |++|+++|+++++||||+|++++||||++||++|++++|+|||+||++|+++||||++||++||+|+++|++++||||++
T Consensus       198 T~~Q~~~D~~~~kD~Rr~Raaa~nIIPtsTGAAkAv~~VlP~L~GKl~G~a~RVPt~nvS~vDLt~~l~k~~t~eein~a  277 (361)
T PTZ00434        198 TATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDAA  277 (361)
T ss_pred             cCCcccccCcCcccccccccccccCccCCcchhhhhceeccccCCceeeEEEecccCcEeEEEEEEEeCCCCCHHHHHHH
Confidence            99999999997799999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCcccccccccCcceEeeccCCCCceeEEeCCCceeec----CCeEEEEEEeCCCchhHhhHHHHHHHHhhhc
Q 021899          232 IKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALS----KNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ  305 (306)
Q Consensus       232 l~~a~~~~lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~----~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~  305 (306)
                      |+++++++|||||+|+|+|+||+||+|++||+|||+.+|.+++    ++++|+++||||||||||||+||+.||.+.+
T Consensus       278 ~k~aa~~~lkgIl~y~~~plVS~Df~g~~~Ssi~D~~~t~v~~~~~~~~~vKv~~WYDNEwGys~Rl~dl~~~~~~~~  355 (361)
T PTZ00434        278 IKRASQTYMKGILGFTDDELVSADFINDNRSSIYDSKATLQNNLPGERRFFKIVSWYDNEWGYSHRVVDLVRYMAAKD  355 (361)
T ss_pred             HHHhhhccccCcccccCCCccccccCCCCCCeEEEhhhCeEeccCCCCCEEEEEEEecCchHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999996    4899999999999999999999999998653

>PRK15425 gapA glyceraldehyde-3-phosphate dehydrogenase A; Provisional Back     alignment and domain information
>PTZ00023 glyceraldehyde-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK07403 glyceraldehyde-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PLN02272 glyceraldehyde-3-phosphate dehydrogenase Back     alignment and domain information
>PLN02358 glyceraldehyde-3-phosphate dehydrogenase Back     alignment and domain information
>PLN02237 glyceraldehyde-3-phosphate dehydrogenase B Back     alignment and domain information
>PLN03096 glyceraldehyde-3-phosphate dehydrogenase A; Provisional Back     alignment and domain information
>PRK07729 glyceraldehyde-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK08955 glyceraldehyde-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PTZ00353 glycosomal glyceraldehyde-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01534 GAPDH-I glyceraldehyde-3-phosphate dehydrogenase, type I Back     alignment and domain information
>PRK08289 glyceraldehyde-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>COG0057 GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase Back     alignment and domain information
>KOG0657 consensus Glyceraldehyde 3-phosphate dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02800 Gp_dh_C: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; InterPro: IPR020829 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis [] by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate Back     alignment and domain information
>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II Back     alignment and domain information
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional Back     alignment and domain information
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial Back     alignment and domain information
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) Back     alignment and domain information
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional Back     alignment and domain information
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional Back     alignment and domain information
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed Back     alignment and domain information
>PF00044 Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; InterPro: IPR020828 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis [] by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate Back     alignment and domain information
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Back     alignment and domain information
>PRK08040 putative semialdehyde dehydrogenase; Provisional Back     alignment and domain information
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed Back     alignment and domain information
>PLN02383 aspartate semialdehyde dehydrogenase Back     alignment and domain information
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) Back     alignment and domain information
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed Back     alignment and domain information
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated Back     alignment and domain information
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form Back     alignment and domain information
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase Back     alignment and domain information
>KOG4777 consensus Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional Back     alignment and domain information
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form Back     alignment and domain information
>PF02774 Semialdhyde_dhC: Semialdehyde dehydrogenase, dimerisation domain; InterPro: IPR012280 This domain contains N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate Back     alignment and domain information
>PRK08300 acetaldehyde dehydrogenase; Validated Back     alignment and domain information
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating) Back     alignment and domain information
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate Back     alignment and domain information
>KOG4354 consensus N-acetyl-gamma-glutamyl-phosphate reductase [Amino acid transport and metabolism] Back     alignment and domain information
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain Back     alignment and domain information
>COG4569 MhpF Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query306
3e5r_O337 Crystal Structure And Functional Analysis Of Glycer 1e-142
3e6a_O336 Crystal Structure And Functional Analysis Of Glycer 1e-142
1ihx_A333 Crystal Structure Of Two D-Glyceraldehyde-3-Phospha 1e-113
1gpd_G334 Studies Of Asymmetry In The Three-Dimensional Struc 1e-113
4gpd_1333 The Structure Of Lobster Apo-D-Glyceraldehyde-3-Pho 1e-113
1szj_G333 Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydr 1e-113
1dss_G333 Structure Of Active-Site Carboxymethylated D-Glycer 1e-112
1znq_O338 Crsytal Structure Of Human Liver Gapdh Length = 338 1e-110
1u8f_O335 Crystal Structure Of Human Placental Glyceraldehyde 1e-110
4iq8_A340 Crystal Structure Of Glyceraldehyde-3-phosphate Deh 1e-109
3pym_A332 Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Res 1e-109
1j0x_O332 Crystal Structure Of The Rabbit Muscle Glyceraldehy 1e-108
3gpd_R334 Twinning In Crystals Of Human Skeletal Muscle D-Gly 1e-108
2i5p_O342 Crystal Structure Of Glyceraldehyde-3-Phosphate Deh 1e-108
3h9e_B346 Crystal Structure Of Human Sperm-Specific Glycerald 1e-104
2vyn_D334 Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotet 1e-103
1gad_O330 Comparison Of The Structures Of Wild Type And A N31 1e-103
1s7c_A331 Crystal Structure Of Mes Buffer Bound Form Of Glyce 1e-103
1gae_O330 Comparison Of The Structures Of Wild Type And A N31 1e-102
2vyn_A331 Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotet 1e-102
2b4r_O345 Crystal Structure Of Glyceraldehyde-3-Phosphate Deh 2e-99
1vsu_A359 Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate 2e-99
1ywg_O337 The Structure Of Glyceraldehyde-3-Phosphate Dehydro 2e-99
3cps_A354 Crystal Structure Of Cryptosporidium Parvum Glycera 2e-99
3cif_A359 Crystal Structure Of C153s Mutant Glyceraldehyde 3- 2e-97
1dc4_A330 Structural Analysis Of Glyceraldehyde 3-Phosphate D 4e-94
3sth_A361 Crystal Structure Of Glyceraldehyde-3-Phosphate Deh 1e-90
2x0n_A359 Structure Of Glycosomal Glyceraldehyde-3-Phosphate 1e-90
1k3t_A359 Structure Of Glycosomal Glyceraldehyde-3-Phosphate 5e-89
3dmt_C359 Structure Of Glycosomal Glyceraldehyde-3-Phosphate 1e-87
1a7k_A360 Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase 1e-85
1gyp_A358 Crystal Structure Of Glycosomal Glyceraldehyde-3-Ph 1e-85
1gd1_O334 Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydr 1e-75
1dbv_O334 Glyceraldehyde-3-Phosphate Dehydrogenase Mutant Wit 2e-75
3dbv_O334 Glyceraldehyde-3-Phosphate Dehydrogenase Mutant Wit 2e-75
1npt_O334 Glyceraldehyde-3-Phosphate Dehydrogenase Mutant Wit 2e-74
1nq5_O334 Glyceraldehyde-3-Phosphate Dehydrogenase Mutant Wit 2e-74
1hdg_O332 The Crystal Structure Of Holo-glyceraldehyde-3-phos 1e-72
3doc_A335 Crystal Structure Of Trka Glyceraldehyde-3-Phosphat 1e-71
3hja_A356 Crystal Structure Of Glyceraldehyde-3-Phosphate Deh 2e-69
2ep7_A342 Structural Study Of Project Id Aq_1065 From Aquifex 1e-66
2pkq_O368 Crystal Structure Of The Photosynthetic A2b2-Glycer 2e-65
3l0d_A356 Crystal Structure Of Glyceraldehyde-3-phosphate Deh 6e-65
3gnq_A344 Crystal Structure Of Glyceraldehyde-3-Phosphate Deh 2e-63
1nbo_O337 The Dual Coenzyme Specificity Of Photosynthetic Gly 3e-63
1rm3_O337 Crystal Structure Of Mutant T33a Of Photosynthetic 3e-63
2pkr_O365 Crystal Structure Of (A+cte)4 Chimeric Form Of Phot 3e-63
1rm5_O337 Crystal Structure Of Mutant S188a Of Photosynthetic 6e-63
1jn0_O335 Crystal Structure Of The Non-Regulatory A4 Isoform 6e-63
1cer_O331 Determinants Of Enzyme Thermostability Observed In 7e-63
1vc2_A331 Crystal Structure Of Glyceraldehyde 3-Phosphate Deh 2e-62
4dib_A345 The Crystal Structure Of Glyceraldehyde-3-Phosphate 1e-61
2g82_O331 High Resolution Structures Of Thermus Aquaticus Gly 2e-61
2d2i_A380 Crystal Structure Of Nadp-Dependent Glyceraldehyde- 7e-60
3b1j_A339 Crystal Structure Of Dehydrogenese Length = 339 8e-60
1obf_O335 The Crystal Structure Of Glyceraldehyde 3-Phosphate 1e-57
3k2b_A337 Crystal Structure Of Photosynthetic A4 Isoform Glyc 3e-57
3k73_Q336 Crystal Structure Of Phosphate Bound Holo Glycerald 2e-54
3vaz_P344 Crystal Structure Of Staphylococcal Gapdh1 In A Hex 2e-54
3lvf_P338 Crystal Structure Of Holo Glyceraldehyde-3-Phosphat 2e-54
3lc7_O339 Crystal Structure Of Apo Glyceraldehyde-3-Phosphate 2e-54
3lc1_P336 Crystal Structure Of H178n Mutant Of Glyceraldehyde 1e-53
3hq4_R336 Crystal Structure Of C151s Mutant Of Glyceraldehyde 3e-53
3k9q_Q336 Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde 4e-53
3ksd_Q336 Crystal Structure Of C151s+h178n Mutant Of Glyceral 3e-52
2xf8_A338 Structure Of The D-Erythrose-4-Phosphate Dehydrogen 3e-48
2x5j_O339 Crystal Structure Of The Apoform Of The D-Erythrose 4e-48
2x5k_O339 Structure Of An Active Site Mutant Of The D-Erythro 1e-45
>pdb|3E5R|O Chain O, Crystal Structure And Functional Analysis Of Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza Sativa Length = 337 Back     alignment and structure 
Iteration: 1

 Score =  501 bits (1290), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 239/301 (79%), Positives = 262/301 (87%)
Query: 5   YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEY 64
           +   +  TYMFKYD+VHGQWKH+++K+KD KTLL GEKPV VFG RNP+EIPWA+ GAEY
Sbjct: 37  FITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEY 96
Query: 65  VVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTT 124
           VVESTGVFT               VVISAPSKDAPMFV GVNE +Y  ++DIVSNASCTT
Sbjct: 97  VVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTT 156
Query: 125 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAA 184
           NCLAPLAKVIHD FGI+EGLMTTVH+ITATQKTVDGPS KDWRGGRAASFNIIPSSTGAA
Sbjct: 157 NCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAA 216
Query: 185 KAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGIL 244
           KAVGKVLP LNGKLTGMSFRVPTVDVSVVDLTVR+EK A+Y+ IK+AIK  SEGKLKGI+
Sbjct: 217 KAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGII 276
Query: 245 GYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304
           GY EED+VSTDFVGDSRSSIFDAKAGIAL+ NFVKLV+WYDNEWGYS+RVIDLI HMAKT
Sbjct: 277 GYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKT 336
Query: 305 Q 305
           Q
Sbjct: 337 Q 337
>pdb|3E6A|O Chain O, Crystal Structure And Functional Analysis Of Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza Sativa Length = 336 Back     alignment and structure
>pdb|1IHX|A Chain A, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate Dehydrogenase Complexes: A Case Of Asymmetry Length = 333 Back     alignment and structure
>pdb|1GPD|G Chain G, Studies Of Asymmetry In The Three-Dimensional Structure Of Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase Length = 334 Back     alignment and structure
>pdb|4GPD|1 Chain 1, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate Dehydrogenase At 3.0 Angstroms Resolution Length = 333 Back     alignment and structure
>pdb|1SZJ|G Chain G, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase From Palinurus Versicolor Refined 2.0 Angstrom Resolution Length = 333 Back     alignment and structure
>pdb|1DSS|G Chain G, Structure Of Active-Site Carboxymethylated D-Glyceraldehyde-3- Phosphate Dehydrogenase From Palinurus Versicolor Length = 333 Back     alignment and structure
>pdb|1ZNQ|O Chain O, Crsytal Structure Of Human Liver Gapdh Length = 338 Back     alignment and structure
>pdb|1U8F|O Chain O, Crystal Structure Of Human Placental Glyceraldehyde-3- Phosphate Dehydrogenase At 1.75 Resolution Length = 335 Back     alignment and structure
>pdb|4IQ8|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate Dehydrogenase 3 From Saccharomyces Cerevisiae Length = 340 Back     alignment and structure
>pdb|3PYM|A Chain A, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution Length = 332 Back     alignment and structure
>pdb|1J0X|O Chain O, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3- Phosphate Dehydrogenase (Gapdh) Length = 332 Back     alignment and structure
>pdb|3GPD|R Chain R, Twinning In Crystals Of Human Skeletal Muscle D-Glyceraldehyde-3- Phosphate Dehydrogenase Length = 334 Back     alignment and structure
>pdb|2I5P|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Isoform 1 From K. Marxianus Length = 342 Back     alignment and structure
>pdb|2VYN|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer Length = 334 Back     alignment and structure
>pdb|1GAD|O Chain O, Comparison Of The Structures Of Wild Type And A N313t Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate Dehydrogenases: Implication For Nad Binding And Cooperativity Length = 330 Back     alignment and structure
>pdb|1S7C|A Chain A, Crystal Structure Of Mes Buffer Bound Form Of Glyceraldehyde 3- Phosphate Dehydrogenase From Escherichia Coli Length = 331 Back     alignment and structure
>pdb|1GAE|O Chain O, Comparison Of The Structures Of Wild Type And A N313t Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate Dehydrogenases: Implication For Nad Binding And Cooperativity Length = 330 Back     alignment and structure
>pdb|2VYN|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer Length = 331 Back     alignment and structure
>pdb|2B4R|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Plasmodium Falciparum At 2.25 Angstrom Resolution Reveals Intriguing Extra Electron Density In The Active Site Length = 345 Back     alignment and structure
>pdb|1VSU|A Chain A, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate Dehydrogenase From Cryptosporidium Parvum Length = 359 Back     alignment and structure
>pdb|1YWG|O Chain O, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Plasmodium Falciparum Length = 337 Back     alignment and structure
>pdb|3CPS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Glyceraldehyde-3-Phosphate Dehydrogenase Length = 354 Back     alignment and structure
>pdb|3CIF|A Chain A, Crystal Structure Of C153s Mutant Glyceraldehyde 3-Phosphate Dehydrogenase From Cryptosporidium Parvum Length = 359 Back     alignment and structure
>pdb|1DC4|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate Dehydrogenase From Escherichia Coli: Direct Evidence For Substrate Binding And Cofactor-Induced Conformational Changes Length = 330 Back     alignment and structure
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Toxoplasma Gondii Length = 361 Back     alignment and structure
>pdb|2X0N|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase From Trypanosoma Brucei Determined From Laue Data Length = 359 Back     alignment and structure
>pdb|1K3T|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase From Trypanosoma Cruzi Complexed With Chalepin, A Coumarin Derivative Inhibitor Length = 359 Back     alignment and structure
>pdb|3DMT|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase From Trypanosoma Cruzi In Complex With The Irreversible Iodoacetate Inhibitor Length = 359 Back     alignment and structure
>pdb|1A7K|A Chain A, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A Monoclinic Crystal Form Length = 360 Back     alignment and structure
>pdb|1GYP|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase From Leishmania Mexicana: Implications For Structure-Based Drug Design And A New Position For The Inorganic Phosphate Binding Site Length = 358 Back     alignment and structure
>pdb|1GD1|O Chain O, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Stearothermophilus At 1.8 Angstroms Resolution Length = 334 Back     alignment and structure
>pdb|1DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp 32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188 Replaced By Ser Complexed With Nad+ Length = 334 Back     alignment and structure
>pdb|3DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu 33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188 Replaced By Ser Complexed With Nad+ Length = 334 Back     alignment and structure
>pdb|1NPT|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys 149 Replaced By Ala Complexed With Nad+ Length = 334 Back     alignment and structure
>pdb|1NQ5|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys 149 Replaced By Ser Complexed With Nad+ Length = 334 Back     alignment and structure
>pdb|1HDG|O Chain O, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate Dehydrogenase From The Hyperthermophilic Bacterium Thermotoga Maritima At 2.5 Angstroms Resolution Length = 332 Back     alignment and structure
>pdb|3DOC|A Chain A, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate Dehydrogenase From Brucella Melitensis Length = 335 Back     alignment and structure
>pdb|3HJA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Borrelia Burgdorferi Length = 356 Back     alignment and structure
>pdb|2EP7|A Chain A, Structural Study Of Project Id Aq_1065 From Aquifex Aeolicus Vf5 Length = 342 Back     alignment and structure
>pdb|2PKQ|O Chain O, Crystal Structure Of The Photosynthetic A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase, Complexed With Nadp Length = 368 Back     alignment and structure
>pdb|3L0D|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate Dehydrogenase From Bartonella Henselae With Bound Nad Length = 356 Back     alignment and structure
>pdb|3GNQ|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase, Type I From Burkholderia Pseudomallei Length = 344 Back     alignment and structure
>pdb|1NBO|O Chain O, The Dual Coenzyme Specificity Of Photosynthetic Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By The Crystal Structure Of A4 Isoform Complexed With Nad Length = 337 Back     alignment and structure
>pdb|1RM3|O Chain O, Crystal Structure Of Mutant T33a Of Photosynthetic Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform, Complexed With Nadp Length = 337 Back     alignment and structure
>pdb|2PKR|O Chain O, Crystal Structure Of (A+cte)4 Chimeric Form Of Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase, Complexed With Nadp Length = 365 Back     alignment and structure
>pdb|1RM5|O Chain O, Crystal Structure Of Mutant S188a Of Photosynthetic Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform, Complexed With Nadp Length = 337 Back     alignment and structure
>pdb|1JN0|O Chain O, Crystal Structure Of The Non-Regulatory A4 Isoform Of Spinach Chloroplast Glyceraldehyde-3-Phosphate Dehydrogenase Complexed With Nadp Length = 335 Back     alignment and structure
>pdb|1CER|O Chain O, Determinants Of Enzyme Thermostability Observed In The Molecular Structure Of Thermus Aquaticus D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5 Angstroms Resolution Length = 331 Back     alignment and structure
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate Dehydrogenase From Thermus Thermophilus Hb8 Length = 331 Back     alignment and structure
>pdb|4DIB|A Chain A, The Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Anthracis Str. Sterne Length = 345 Back     alignment and structure
>pdb|2G82|O Chain O, High Resolution Structures Of Thermus Aquaticus Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's Loop Motion In Catalysis Length = 331 Back     alignment and structure
>pdb|2D2I|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3- Phosphate Dehydrogenase From Synechococcus Sp. Complexed With Nadp+ Length = 380 Back     alignment and structure
>pdb|3B1J|A Chain A, Crystal Structure Of Dehydrogenese Length = 339 Back     alignment and structure
>pdb|1OBF|O Chain O, The Crystal Structure Of Glyceraldehyde 3-Phosphate Dehydrogenase From Alcaligenes Xylosoxidans At 1.7 Resolution. Length = 335 Back     alignment and structure
>pdb|3K2B|A Chain A, Crystal Structure Of Photosynthetic A4 Isoform Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With Nad, From Arabidopsis Thaliana Length = 337 Back     alignment and structure
>pdb|3K73|Q Chain Q, Crystal Structure Of Phosphate Bound Holo Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252 At 2.5 Angstrom Resolution Length = 336 Back     alignment and structure
>pdb|3VAZ|P Chain P, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal Space Group Length = 344 Back     alignment and structure
>pdb|3LVF|P Chain P, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin Resistant Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution Length = 338 Back     alignment and structure
>pdb|3LC7|O Chain O, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicllin Resistant Staphylococcus Aureus (Mrsa252) Length = 339 Back     alignment and structure
>pdb|3LC1|P Chain P, Crystal Structure Of H178n Mutant Of Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1) From Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.0 Angstrom Resolution. Length = 336 Back     alignment and structure
>pdb|3HQ4|R Chain R, Crystal Structure Of C151s Mutant Of Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1) Complexed With Nad From Staphylococcus Aureus Mrsa252 At 2.2 Angstrom Resolution Length = 336 Back     alignment and structure
>pdb|3K9Q|Q Chain Q, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde 3-Phosphate Dehydrogenase 1 From Methicillin Resistant Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom Resolution Length = 336 Back     alignment and structure
>pdb|3KSD|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2 Angstrom Resolution Length = 336 Back     alignment and structure
>pdb|2XF8|A Chain A, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase From E.Coli In Complex With A Nad Cofactor Analog (3- Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate Anion Length = 338 Back     alignment and structure
>pdb|2X5J|O Chain O, Crystal Structure Of The Apoform Of The D-Erythrose-4-Phosphate Dehydrogenase From E. Coli Length = 339 Back     alignment and structure
>pdb|2X5K|O Chain O, Structure Of An Active Site Mutant Of The D-Erythrose-4-Phosphate Dehydrogenase From E. Coli Length = 339 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query306
3e5r_O337 PP38, glyceraldehyde-3-phosphate dehydrogenase, cy 0.0
3pym_A332 GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 0.0
1gad_O330 D-glyceraldehyde-3-phosphate dehydrogenase; oxidor 0.0
3h9e_O346 Glyceraldehyde-3-phosphate dehydrogenase, testis-; 0.0
3cps_A354 Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g 0.0
2b4r_O345 Glyceraldehyde-3-phosphate dehydrogenase; SGPP, st 0.0
1u8f_O335 GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l 0.0
3ids_C359 GAPDH, glyceraldehyde-3-phosphate dehydrogenase, g 0.0
3cmc_O334 GAPDH, glyceraldehyde-3-phosphate dehydrogenase; m 0.0
1rm4_O337 Glyceraldehyde 3-phosphate dehydrogenase A; rossma 0.0
2g82_O331 GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G 0.0
3lvf_P338 GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 0.0
4dib_A345 GAPDH, glyceraldehyde 3-phosphate dehydrogenase; n 0.0
2d2i_A380 Glyceraldehyde 3-phosphate dehydrogenase; rossmann 0.0
3hja_A356 GAPDH, glyceraldehyde-3-phosphate dehydrogenase; n 0.0
3b1j_A339 Glyceraldehyde 3-phosphate dehydrogenase (NADP+); 0.0
2ep7_A342 GAPDH, glyceraldehyde-3-phosphate dehydrogenase; o 1e-180
1hdg_O332 Holo-D-glyceraldehyde-3-phosphate dehydrogenase; o 1e-179
3doc_A335 Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, 1e-169
2x5j_O339 E4PDH, D-erythrose-4-phosphate dehydrogenase; oxid 1e-162
1obf_O335 Glyceraldehyde 3-phosphate dehydrogenase; glycolyt 1e-159
1cf2_P337 Protein (glyceraldehyde-3-phosphate dehydrogenase) 1e-111
2yyy_A343 Glyceraldehyde-3-phosphate dehydrogenase; glyceral 2e-89
2czc_A334 Glyceraldehyde-3-phosphate dehydrogenase; glycolys 2e-84
1b7g_O340 Protein (glyceraldehyde 3-phosphate dehydrogenase; 5e-54
2ep5_A350 350AA long hypothetical aspartate-semialdehyde deh 2e-06
1ys4_A354 Aspartate-semialdehyde dehydrogenase; oxidoreducta 8e-05
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O Length = 337 Back     alignment and structure
 Score =  620 bits (1602), Expect = 0.0
 Identities = 252/293 (86%), Positives = 274/293 (93%)

Query: 13  YMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVF 72
           YMFKYD+VHGQWKH+++K+KD KTLL GEKPV VFG RNP+EIPWA+ GAEYVVESTGVF
Sbjct: 45  YMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVF 104

Query: 73  TDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAK 132
           TDK+KAAAHLKGGAKKVVISAPSKDAPMFV GVNE +Y  ++DIVSNASCTTNCLAPLAK
Sbjct: 105 TDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAK 164

Query: 133 VIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLP 192
           VIHD FGI+EGLMTTVH+ITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP
Sbjct: 165 VIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLP 224

Query: 193 ALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVV 252
            LNGKLTGMSFRVPTVDVSVVDLTVR+EK A+Y+ IK+AIK  SEGKLKGI+GY EED+V
Sbjct: 225 DLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLV 284

Query: 253 STDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ 305
           STDFVGDSRSSIFDAKAGIAL+ NFVKLV+WYDNEWGYS+RVIDLI HMAKTQ
Sbjct: 285 STDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O* Length = 332 Back     alignment and structure
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A* Length = 330 Back     alignment and structure
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D* Length = 346 Back     alignment and structure
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A* Length = 354 Back     alignment and structure
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O* Length = 345 Back     alignment and structure
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1 Length = 335 Back     alignment and structure
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A* Length = 359 Back     alignment and structure
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O* Length = 334 Back     alignment and structure
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O* Length = 337 Back     alignment and structure
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A* Length = 331 Back     alignment and structure
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O* Length = 338 Back     alignment and structure
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis} Length = 345 Back     alignment and structure
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A Length = 380 Back     alignment and structure
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31} Length = 356 Back     alignment and structure
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A* Length = 339 Back     alignment and structure
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus} Length = 342 Back     alignment and structure
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 Length = 332 Back     alignment and structure
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A* Length = 335 Back     alignment and structure
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O* Length = 339 Back     alignment and structure
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A* Length = 335 Back     alignment and structure
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1 Length = 337 Back     alignment and structure
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii} Length = 343 Back     alignment and structure
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1 Length = 334 Back     alignment and structure
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 Length = 340 Back     alignment and structure
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} Length = 350 Back     alignment and structure
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} Length = 354 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query306
3h9e_O346 Glyceraldehyde-3-phosphate dehydrogenase, testis-; 100.0
3pym_A332 GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 100.0
3v1y_O337 PP38, glyceraldehyde-3-phosphate dehydrogenase, cy 100.0
4dib_A345 GAPDH, glyceraldehyde 3-phosphate dehydrogenase; n 100.0
3doc_A335 Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, 100.0
3ids_C359 GAPDH, glyceraldehyde-3-phosphate dehydrogenase, g 100.0
3lvf_P338 GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 100.0
3hja_A356 GAPDH, glyceraldehyde-3-phosphate dehydrogenase; n 100.0
1obf_O335 Glyceraldehyde 3-phosphate dehydrogenase; glycolyt 100.0
2b4r_O345 Glyceraldehyde-3-phosphate dehydrogenase; SGPP, st 100.0
2ep7_A342 GAPDH, glyceraldehyde-3-phosphate dehydrogenase; o 100.0
2g82_O331 GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G 100.0
2d2i_A380 Glyceraldehyde 3-phosphate dehydrogenase; rossmann 100.0
1rm4_O337 Glyceraldehyde 3-phosphate dehydrogenase A; rossma 100.0
3b1j_A339 Glyceraldehyde 3-phosphate dehydrogenase (NADP+); 100.0
3cmc_O334 GAPDH, glyceraldehyde-3-phosphate dehydrogenase; m 100.0
1hdg_O332 Holo-D-glyceraldehyde-3-phosphate dehydrogenase; o 100.0
3cps_A354 Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g 100.0
1gad_O330 D-glyceraldehyde-3-phosphate dehydrogenase; oxidor 100.0
3e5r_O337 PP38, glyceraldehyde-3-phosphate dehydrogenase, cy 100.0
1u8f_O335 GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l 100.0
2x5j_O339 E4PDH, D-erythrose-4-phosphate dehydrogenase; oxid 100.0
2yyy_A343 Glyceraldehyde-3-phosphate dehydrogenase; glyceral 100.0
2yv3_A331 Aspartate-semialdehyde dehydrogenase; aspartate pa 100.0
2r00_A336 Aspartate-semialdehyde dehydrogenase; conformation 100.0
2hjs_A340 USG-1 protein homolog; aspartate-semialdehyde dehy 100.0
1cf2_P337 Protein (glyceraldehyde-3-phosphate dehydrogenase) 100.0
1t4b_A367 Aspartate-semialdehyde dehydrogenase; asadh, HOSR, 100.0
2czc_A334 Glyceraldehyde-3-phosphate dehydrogenase; glycolys 100.0
1b7g_O340 Protein (glyceraldehyde 3-phosphate dehydrogenase; 100.0
3uw3_A377 Aspartate-semialdehyde dehydrogenase; structural g 100.0
3pzr_A370 Aspartate-semialdehyde dehydrogenase; NADP, oxidor 100.0
3pwk_A366 Aspartate-semialdehyde dehydrogenase; NADP binding 100.0
3tz6_A344 Aspartate-semialdehyde dehydrogenase; asadh, ASD, 100.0
2ep5_A350 350AA long hypothetical aspartate-semialdehyde deh 100.0
1xyg_A359 Putative N-acetyl-gamma-glutamyl-phosphate reduct; 100.0
4dpk_A359 Malonyl-COA/succinyl-COA reductase; dinucleotide b 100.0
4dpl_A359 Malonyl-COA/succinyl-COA reductase; dinucleotide b 100.0
2ozp_A345 N-acetyl-gamma-glutamyl-phosphate reductase; amino 99.98
1ys4_A354 Aspartate-semialdehyde dehydrogenase; oxidoreducta 99.98
3hsk_A381 Aspartate-semialdehyde dehydrogenase; candida albi 99.97
3dr3_A337 N-acetyl-gamma-glutamyl-phosphate reductase; csgid 99.97
2nqt_A352 N-acetyl-gamma-glutamyl-phosphate reductase; apopr 99.95
1vkn_A351 N-acetyl-gamma-glutamyl-phosphate reductase; TM178 99.9
1nvm_B312 Acetaldehyde dehydrogenase (acylating), 4-hydroxy- 97.4
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D* Back     alignment and structure
Probab=100.00  E-value=6.6e-114  Score=818.35  Aligned_cols=303  Identities=62%  Similarity=1.018  Sum_probs=296.9

Q ss_pred             cccCCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHH
Q 021899            2 YIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAH   81 (306)
Q Consensus         2 ~~~~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h   81 (306)
                      +-|+.|+++|+|||||||+||+|+ ++|+++++ +|.|||++|+|+++++|+++||+++|+||||||||.|+++|+|+.|
T Consensus        37 nDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~h  114 (346)
T 3h9e_O           37 NDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDH  114 (346)
T ss_dssp             ECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSSGGGCCGGGGTSCEEEECSSSCCSHHHHHHH
T ss_pred             eCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecCChhhCCcccccccEEEEeccccCCHHHHHHH
Confidence            457899999999999999999999 99999988 9999999999999999999999999999999999999999999999


Q ss_pred             HhCCCCeEEeeCCCCCCCeEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccC
Q 021899           82 LKGGAKKVVISAPSKDAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDG  160 (306)
Q Consensus        82 ~~aGakkvvIsaps~d~p~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~  160 (306)
                      +++||||||||+||+|+||||||||++.|++ +++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+
T Consensus       115 l~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg  194 (346)
T 3h9e_O          115 ISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDG  194 (346)
T ss_dssp             HHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSC
T ss_pred             HHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHHHHHHHHHHhCeeEEEEeeeeeccCccccccC
Confidence            9999999999999999999999999999997 789999999999999999999999999999999999999999999999


Q ss_pred             CCccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcc
Q 021899          161 PSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKL  240 (306)
Q Consensus       161 ~~~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~l  240 (306)
                      ++++|||++|++++||||++||++|+++||+|||+||++|+|+||||++||++||+|+++|++++|||+++|+++++++|
T Consensus       195 ~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~l  274 (346)
T 3h9e_O          195 PSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPM  274 (346)
T ss_dssp             CCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTT
T ss_pred             CCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEcccccceeEEEEEEECCcCCHHHHHHHHHHhccCcc
Confidence            98899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhhcC
Q 021899          241 KGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA  306 (306)
Q Consensus       241 kgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~~  306 (306)
                      ||||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+++++
T Consensus       275 kgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~~~~  340 (346)
T 3h9e_O          275 AGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYMFSRDA  340 (346)
T ss_dssp             TTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCceeEEcCCeEeeccCCCCCceeEcccccEEecCCEEEEEEEECCCcchHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999999999999999999999999999999999998653
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O* Back     alignment and structure
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O Back     alignment and structure
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis} Back     alignment and structure
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A* Back     alignment and structure
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A* Back     alignment and structure
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O* Back     alignment and structure
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31} Back     alignment and structure
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A* Back     alignment and structure
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O* Back     alignment and structure
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus} Back     alignment and structure
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A* Back     alignment and structure
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A Back     alignment and structure
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O* Back     alignment and structure
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A* Back     alignment and structure
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O* Back     alignment and structure
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A* Back     alignment and structure
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A* Back     alignment and structure
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O Back     alignment and structure
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1 Back     alignment and structure
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O* Back     alignment and structure
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii} Back     alignment and structure
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} Back     alignment and structure
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* Back     alignment and structure
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* Back     alignment and structure
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} Back     alignment and structure
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A Back     alignment and structure
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A Back     alignment and structure
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A Back     alignment and structure
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} Back     alignment and structure
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A Back     alignment and structure
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* Back     alignment and structure
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* Back     alignment and structure
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} Back     alignment and structure
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} Back     alignment and structure
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} Back     alignment and structure
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A Back     alignment and structure
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A Back     alignment and structure
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 306
d1u8fo2164 d.81.1.1 (O:152-315) Glyceraldehyde-3-phosphate de 1e-94
d3cmco2163 d.81.1.1 (O:149-312) Glyceraldehyde-3-phosphate de 3e-91
d1rm4a2163 d.81.1.1 (A:149-312) Glyceraldehyde-3-phosphate de 7e-90
d1obfo2162 d.81.1.1 (O:153-314) Glyceraldehyde-3-phosphate de 1e-82
d2g82a2162 d.81.1.1 (A:149-310) Glyceraldehyde-3-phosphate de 3e-80
d1k3ta2169 d.81.1.1 (A:165-333) Glyceraldehyde-3-phosphate de 3e-76
d1dssg1169 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosp 1e-45
d1u8fo1169 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosp 4e-45
d1rm4a1172 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosp 2e-43
d1hdgo1169 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosp 2e-40
d1cf2o2165 d.81.1.1 (O:139-303) Glyceraldehyde-3-phosphate de 1e-39
d1gado1166 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosp 4e-39
d1b7go2162 d.81.1.1 (O:139-300) Glyceraldehyde-3-phosphate de 2e-38
d3cmco1171 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosp 4e-37
d1k3ta1190 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosp 1e-35
d2b4ro1166 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosp 1e-34
d1cf2o1171 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosp 2e-34
d2g82a1168 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosp 2e-30
d1obfo1173 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosp 5e-29
d2czca2172 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosp 5e-29
d1b7go1178 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosp 7e-24
d2czca1162 d.81.1.1 (A:140-301) Glyceraldehyde-3-phosphate de 2e-07
>d1u8fo2 d.81.1.1 (O:152-315) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} Length = 164 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: GAPDH-like
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

 Score =  275 bits (704), Expect = 1e-94
 Identities = 126/164 (76%), Positives = 140/164 (85%)

Query: 122 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSST 181
           CTTNCLAPLAKVIHD FGIVEGLMTTVH+ITATQKTVDGPS K WR GR A  NIIP+ST
Sbjct: 1   CTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPAST 60

Query: 182 GAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLK 241
           GAAKAVGKV+P LNGKLTGM+FRVPT +VSVVDLT RLEK A Y++IK  +K+ SEG LK
Sbjct: 61  GAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLK 120

Query: 242 GILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYD 285
           GILGYTE  VVS+DF  D+ SS FDA AGIAL+ +FVKL+SWYD
Sbjct: 121 GILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYD 164
>d3cmco2 d.81.1.1 (O:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Length = 163 Back     information, alignment and structure
>d1rm4a2 d.81.1.1 (A:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 163 Back     information, alignment and structure
>d1obfo2 d.81.1.1 (O:153-314) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} Length = 162 Back     information, alignment and structure
>d2g82a2 d.81.1.1 (A:149-310) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} Length = 162 Back     information, alignment and structure
>d1k3ta2 d.81.1.1 (A:165-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} Length = 169 Back     information, alignment and structure
>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} Length = 169 Back     information, alignment and structure
>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} Length = 169 Back     information, alignment and structure
>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 172 Back     information, alignment and structure
>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} Length = 169 Back     information, alignment and structure
>d1cf2o2 d.81.1.1 (O:139-303) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} Length = 165 Back     information, alignment and structure
>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} Length = 166 Back     information, alignment and structure
>d1b7go2 d.81.1.1 (O:139-300) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 162 Back     information, alignment and structure
>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Length = 171 Back     information, alignment and structure
>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} Length = 190 Back     information, alignment and structure
>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 166 Back     information, alignment and structure
>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} Length = 171 Back     information, alignment and structure
>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} Length = 168 Back     information, alignment and structure
>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} Length = 173 Back     information, alignment and structure
>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 172 Back     information, alignment and structure
>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 178 Back     information, alignment and structure
>d2czca1 d.81.1.1 (A:140-301) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 162 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query306
d3cmco2163 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1u8fo2164 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1rm4a2163 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d2g82a2162 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1k3ta2169 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1obfo2162 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1dssg1169 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d3cmco1171 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1gado1166 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1u8fo1169 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d2g82a1168 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d2b4ro1166 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1k3ta1190 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1rm4a1172 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1hdgo1169 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1obfo1173 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 100.0
d1cf2o2165 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 99.95
d1mb4a2222 Aspartate beta-semialdehyde dehydrogenase {Vibrio 99.93
d1t4ba2221 Aspartate beta-semialdehyde dehydrogenase {Escheri 99.93
d1b7go1178 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 99.93
d1b7go2162 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 99.92
d2hjsa2190 Usg-1 protein homolog PA3116 {Pseudomonas aerugino 99.91
d1cf2o1171 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 99.91
d2czca2172 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 99.9
d2gz1a2202 Aspartate beta-semialdehyde dehydrogenase {Strepto 99.9
d2czca1162 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 99.75
d2gz1a1154 Aspartate beta-semialdehyde dehydrogenase {Strepto 99.53
d2hjsa1144 Usg-1 protein homolog PA3116 {Pseudomonas aerugino 99.44
d1nvmb1157 Acetaldehyde dehydrogenase (acylating) {Pseudomona 99.15
d1mb4a1147 Aspartate beta-semialdehyde dehydrogenase {Vibrio 98.87
d1vkna1176 N-acetyl-gamma-glutamyl-phosphate reductase ArgC { 98.62
d2cvoa1183 Putative semialdehyde dehydrogenase {Rice (Oryza s 98.54
d1t4ba1146 Aspartate beta-semialdehyde dehydrogenase {Escheri 98.53
d2g17a1179 N-acetyl-gamma-glutamyl-phosphate reductase ArgC { 98.38
d2g17a2155 N-acetyl-gamma-glutamyl-phosphate reductase ArgC { 97.57
d2cvoa2165 Putative semialdehyde dehydrogenase {Rice (Oryza s 96.91
d1vkna2163 N-acetyl-gamma-glutamyl-phosphate reductase ArgC { 95.85
>d3cmco2 d.81.1.1 (O:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: GAPDH-like
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=100.00  E-value=2.4e-63  Score=424.32  Aligned_cols=163  Identities=59%  Similarity=0.917  Sum_probs=161.8

Q ss_pred             hhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCccccccccccccccccCCCChhHHHHhhhcccCCceEEE
Q 021899          122 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGM  201 (306)
Q Consensus       122 CtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~  201 (306)
                      ||||||||++|+||++|||++++|||+||||++|+++|+++ +||||+|++++||||++||++|++++|+|||+||++|+
T Consensus         1 CTTNclaP~~kvl~~~fgI~~g~mTTvHa~T~~Q~l~D~~~-~d~Rr~Raa~~niIPtsTgAakav~~vlP~L~gkl~g~   79 (163)
T d3cmco2           1 CTTNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGM   79 (163)
T ss_dssp             HHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEE
T ss_pred             ChhHHHHHHHHHHHhhcCeeEEEEEeeccccCcccCCCCCC-cchhccchHhhCCCCccccHHHHHHHhhHHhCCCcceE
Confidence            99999999999999999999999999999999999999987 89999999999999999999999999999999999999


Q ss_pred             EEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEE
Q 021899          202 SFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLV  281 (306)
Q Consensus       202 avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~  281 (306)
                      ++||||++||++||+++++|++++|+|+++|+++++++|||||+|+|||+||+||+|++||+|||+.+|.+++|+++|++
T Consensus        80 a~RVPt~~vS~vDlt~~l~k~~t~e~in~~~k~as~~~lkgil~~t~~plVSsDf~g~~~SsI~D~~~t~v~~~~~vKv~  159 (163)
T d3cmco2          80 AMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVV  159 (163)
T ss_dssp             EEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEE
T ss_pred             EEecCCCcceeEEEEEEecCcCCHHHHHHHHHHHhcCCccCcceeeecccchhhccCCCccEEEEcccCEEECCCEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeC
Q 021899          282 SWYD  285 (306)
Q Consensus       282 ~WyD  285 (306)
                      +|||
T Consensus       160 aWYD  163 (163)
T d3cmco2         160 SWYD  163 (163)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9998
>d1u8fo2 d.81.1.1 (O:152-315) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} Back     information, alignment and structure
>d1rm4a2 d.81.1.1 (A:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d2g82a2 d.81.1.1 (A:149-310) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1k3ta2 d.81.1.1 (A:165-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1obfo2 d.81.1.1 (O:153-314) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} Back     information, alignment and structure
>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Back     information, alignment and structure
>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} Back     information, alignment and structure
>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1cf2o2 d.81.1.1 (O:139-303) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} Back     information, alignment and structure
>d1mb4a2 d.81.1.1 (A:133-354) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1t4ba2 d.81.1.1 (A:134-354) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1b7go2 d.81.1.1 (O:139-300) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2hjsa2 d.81.1.1 (A:130-319) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} Back     information, alignment and structure
>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2gz1a2 d.81.1.1 (A:128-329) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2czca1 d.81.1.1 (A:140-301) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2g17a2 d.81.1.1 (A:154-308) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2cvoa2 d.81.1.1 (A:219-383) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1vkna2 d.81.1.1 (A:145-307) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure