Citrus Sinensis ID: 022528

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGPQESE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccHHHHHHHHHHcccccEEEEEEEccccccEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHcccccccccccccccccccccEEEEEEccccccccEEEEEcccccccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHcccccEEEEccccccHHHHcccccccEHHHcccccccEEEEEEccccHHHHHHHHHHHHHHHccccccEEEEcccHHHcccccccccccHHHHHHHHHHHHccEEEEEEEcccccccEEEEEEcccccccc
Coil and Loop (DISEMBL)
mplssnsaialptvpipvpsiprrqancRKFSIKcsnenfsgqriitfspyrrkhscltnsvssdgnnsinvdvpfpsdysELLDQAKMAAELAVKDGMKLMEIEfptagldsvpgdseggiemtGSMRLICEFCdlfvtpekvtrtriffpeanevkFARKSVFegasfkldyltkpsffedfgfteKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGEldrirsgyypsffypkLAALSKTLFPVMETIYYIHNfkgrnggtlfrflegpqese
Flexible Loop (DISEMBL)
mplssnsaialptvpipvpsiprRQANCRKFSikcsnenfsgqRIITFSPYRRKHSCLTnsvssdgnnsiNVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVtrtriffpeanevkfarkSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRflegpqese
Low Complexity Region (SEG)
MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGPQESE
Disordered region (IsUnstruct)
************************QANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLT************VDVPF***Y*ELLDQAKMAAELAVKDGMKLMEIEFPTAG***********IEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFL*******
Disordered Region (DISOPRED)
***************************************************************************FPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGF************EDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGPQ***
Disordered Region (DISEMBL)
MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGPQESE
Disordered Region (DISPRO)
***********PTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGP****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGPQESE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
225427403	322	PREDICTED: uncharacterized protein LOC10	0.952	0.872	0.703	1e-109
356496430	324	PREDICTED: uncharacterized protein LOC10	0.962	0.876	0.694	1e-107
224071439	260	predicted protein [Populus trichocarpa]	0.769	0.873	0.823	1e-104
255557645	316	conserved hypothetical protein [Ricinus	0.779	0.727	0.783	1e-100
449456759	336	PREDICTED: uncharacterized protein LOC10	0.952	0.836	0.647	1e-100
109289908	338	hypothetical protein SBB1_14t00013 [Sola	0.779	0.680	0.722	6e-97
357146418	322	PREDICTED: uncharacterized protein LOC10	0.972	0.891	0.654	1e-96
113208412	338	hypothetical protein SBB1_21t00009 [Sola	0.786	0.686	0.716	1e-96
224034407	324	unknown [Zea mays] gi|413926746|gb|AFW66	0.949	0.864	0.646	9e-95
18422955	316	uncharacterized protein [Arabidopsis tha	0.789	0.737	0.743	4e-94

>gi|225427403|ref|XP_002263777.1| PREDICTED: uncharacterized protein LOC100265501 [Vitis vinifera] gi|296088391|emb|CBI37382.3| unnamed protein product [Vitis vinifera]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/290 (70%), Positives = 229/290 (78%), Gaps = 9/290 (3%)

Query: 9   IALPTVPI------PVPSIPRRQA-NCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNS 61
           + L T+PI      P+PS+   +  +CR F +K  + +F G +I  F    R      NS
Sbjct: 1   MTLSTIPIASRISIPIPSLQNPKVLSCRSFQVK-KDGSFCGPKIAAFK-MSRNLEFKANS 58

Query: 62  VSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGG 121
           VS D + S+  +VPFPSDYSE+L+QAK A ELA+KD  +LMEIEFPTAGL+SVPGD EGG
Sbjct: 59  VSGDSSASVGFNVPFPSDYSEILEQAKEATELALKDKKQLMEIEFPTAGLESVPGDGEGG 118

Query: 122 IEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFF 181
           IEMTGSM+LI EFCD+F+ PEK TRTRIFFPEANEVKFAR+S F GASFKLDYLTKPS F
Sbjct: 119 IEMTGSMQLIREFCDIFINPEKATRTRIFFPEANEVKFARQSAFGGASFKLDYLTKPSLF 178

Query: 182 EDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELD 241
           EDFGF  KVKMADRVK EDELFLVAYPYFNVNEMLVVEELY EAV NTA KLIIFNGELD
Sbjct: 179 EDFGFVTKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYNEAVVNTARKLIIFNGELD 238

Query: 242 RIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGP 291
           RIRSGYYP FFYPKLAAL+K+L P MET+YYIHNFKGR GGTLFR   GP
Sbjct: 239 RIRSGYYPPFFYPKLAALTKSLLPKMETVYYIHNFKGRKGGTLFRCYPGP 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496430|ref|XP_003517071.1| PREDICTED: uncharacterized protein LOC100805878 [Glycine max]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/288 (69%), Positives = 226/288 (78%), Gaps = 4/288 (1%)

Query: 6   NSAIALPTVPIPVPSIPRRQ-ANCRKFSIKCSNE-NFSGQRIITFSPYRRKHSCLTNSVS 63
           +S + L   PI  PS+P    A    FS+K        G    + +P  RK +  T SVS
Sbjct: 4   SSTMILSNSPIASPSLPTSTGAKLETFSLKNDGVIRIRGATASSVAPRIRKTA--TCSVS 61

Query: 64  SDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIE 123
            DGN S+  DVPFP+DYSELL+QA++AA+LA+KD  +LMEIEFPTAGL SVPGD EGGIE
Sbjct: 62  KDGNASVETDVPFPADYSELLEQARVAADLAIKDNRQLMEIEFPTAGLGSVPGDGEGGIE 121

Query: 124 MTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFED 183
           MT SM+LI EFCD F++ EK TRTRIFFPEA+EV FAR+SVF G SFKLDYLTKPSFFED
Sbjct: 122 MTESMQLIREFCDRFISSEKATRTRIFFPEASEVDFARQSVFSGCSFKLDYLTKPSFFED 181

Query: 184 FGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRI 243
           FGF EK+KM+DRVK  DELFLV YPYFNVNE+LVVEELYKEAV NT  KLIIFNGELDRI
Sbjct: 182 FGFVEKIKMSDRVKTGDELFLVGYPYFNVNEILVVEELYKEAVLNTERKLIIFNGELDRI 241

Query: 244 RSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGP 291
           RSGYYPSFFYPKLAAL+KT  P+MET+YYIHNFKGRNGGTLFR   GP
Sbjct: 242 RSGYYPSFFYPKLAALTKTFLPMMETVYYIHNFKGRNGGTLFRCYPGP 289

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071439|ref|XP_002303460.1| predicted protein [Populus trichocarpa] gi|222840892|gb|EEE78439.1| predicted protein [Populus trichocarpa]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/227 (82%), Positives = 201/227 (88%)

Query: 67  NNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTG 126
           ++S+  DVPFP DY ELLDQAK A ELA +D  +LMEIEFPTAGL+SVPGD EGGIEMTG
Sbjct: 2   SSSVEFDVPFPRDYEELLDQAKKATELAWEDNKQLMEIEFPTAGLESVPGDGEGGIEMTG 61

Query: 127 SMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGF 186
           SM+LI EFCD FV+PEK TRTRIFFPEANEVKFAR+S FEG+S KLDYLTKPSFFEDFGF
Sbjct: 62  SMQLIREFCDRFVSPEKTTRTRIFFPEANEVKFARQSAFEGSSLKLDYLTKPSFFEDFGF 121

Query: 187 TEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSG 246
            EKVKM DRVK EDELFLVAYPYFNVNEMLVVEELYKEAV  TA KLIIFNGELDRIRSG
Sbjct: 122 VEKVKMTDRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVETARKLIIFNGELDRIRSG 181

Query: 247 YYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGPQE 293
           YYPSFFYPKLA+L KTLFP+MET+YYIHNFKGRNGGTLFR   GP +
Sbjct: 182 YYPSFFYPKLASLLKTLFPLMETVYYIHNFKGRNGGTLFRCYPGPWQ 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557645|ref|XP_002519852.1| conserved hypothetical protein [Ricinus communis] gi|223540898|gb|EEF42456.1| conserved hypothetical protein [Ricinus communis]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/231 (78%), Positives = 199/231 (86%), Gaps = 1/231 (0%)

Query: 62  VSSDGNNS-INVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEG 120
           VS +G++S +  DVP P DY ELL QAK A +LA+KDG +LMEIEFPTAGL+SVPGD EG
Sbjct: 52  VSRNGSSSSVESDVPLPRDYEELLVQAKKATDLALKDGKQLMEIEFPTAGLESVPGDGEG 111

Query: 121 GIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSF 180
           GIEMT SM+LI +FCD FV+PEK  RTR+FFPEANEVKFAR+S F G+S KLDYLTKPSF
Sbjct: 112 GIEMTESMQLIRQFCDRFVSPEKAARTRVFFPEANEVKFARESAFGGSSLKLDYLTKPSF 171

Query: 181 FEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGEL 240
           FEDFGF EK+KM DRVK EDELFLVAYPYFNVNEMLVVEELY EAV NT  K+IIFNGEL
Sbjct: 172 FEDFGFVEKIKMTDRVKPEDELFLVAYPYFNVNEMLVVEELYNEAVVNTTRKMIIFNGEL 231

Query: 241 DRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGP 291
           DRIRSGYYPSFFYPKLA+L KTLFPVMET+YYIHNFKGR GGTLFR   GP
Sbjct: 232 DRIRSGYYPSFFYPKLASLLKTLFPVMETVYYIHNFKGRKGGTLFRCYPGP 282

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456759|ref|XP_004146116.1| PREDICTED: uncharacterized protein LOC101209709 [Cucumis sativus] gi|449509516|ref|XP_004163611.1| PREDICTED: uncharacterized LOC101209709 [Cucumis sativus]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/301 (64%), Positives = 221/301 (73%), Gaps = 20/301 (6%)

Query: 4   SSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSC---LTN 60
           +S+S IA   +P+P P +      C + S + ++ +     +  F P R        L+N
Sbjct: 9   ASSSTIATAVLPLPSPKLA-----CFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSN 63

Query: 61  SVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEG 120
             SS  N S ++DVPFP DYS+LL+QAK A E A+ D  +LMEIEFPTAGL+SVPGD EG
Sbjct: 64  RQSS--NASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGEG 121

Query: 121 GIEMTGSMRLICEFCDLFVTPEKVTRTRI----------FFPEANEVKFARKSVFEGASF 170
           GIEMT SM+LI +FCD F+ P K TRTR+          FFPEANEVKFAR + FEG SF
Sbjct: 122 GIEMTESMQLIRQFCDCFIDPLKATRTRVTVSIKENHIQFFPEANEVKFARNTAFEGVSF 181

Query: 171 KLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTA 230
           KLDYLTKPSFFEDFGF EKVKMADRVK EDELFLVAYPYFNVNEMLVVEELYKEAV NT 
Sbjct: 182 KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTT 241

Query: 231 WKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEG 290
            KLIIFNGELDRIRSGYYP FFYPKLAAL KTLFP MET+YYIHNFKG+ GG LFR   G
Sbjct: 242 RKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPG 301

Query: 291 P 291
           P
Sbjct: 302 P 302

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|109289908|gb|AAP45177.2| hypothetical protein SBB1_14t00013 [Solanum bulbocastanum]

 Score =  360 bits (923), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 187/259 (72%), Positives = 199/259 (76%), Gaps = 29/259 (11%)

Query: 61  SVSSDGNNSINVDVPFPSDYSELLDQ----------------------------AKMAAE 92
           S S D   SI  DVPFP DY+ELL Q                            AK A E
Sbjct: 47  SCSGDRAASIGFDVPFPKDYTELLQQVFILFAFSPLKIGGRGSGNGGGITREIKAKEATE 106

Query: 93  LAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFP 152
           LA+KD  +LMEIEFPTAGL SVPGD EGGIEMTGS++LI EFCDL V PEK T+TRIFFP
Sbjct: 107 LALKDNRQLMEIEFPTAGLGSVPGDGEGGIEMTGSIQLIREFCDLLVIPEKATKTRIFFP 166

Query: 153 EANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNV 212
           EANEVKFAR+S+F GASFKLDYLTKPSFFEDFGFTEKVKMADRVK EDELF+VAYPYFNV
Sbjct: 167 EANEVKFARQSIFGGASFKLDYLTKPSFFEDFGFTEKVKMADRVKPEDELFIVAYPYFNV 226

Query: 213 NEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYY 272
           NEMLVVEELY+ AV NT+ KLIIFNGELDRIRS  YP FFYPKLAALSKTLFP MET+YY
Sbjct: 227 NEMLVVEELYQAAVLNTSRKLIIFNGELDRIRSD-YPPFFYPKLAALSKTLFPKMETVYY 285

Query: 273 IHNFKGRNGGTLFRFLEGP 291
           IHNFKGRNGG LFR   GP
Sbjct: 286 IHNFKGRNGGVLFRCYPGP 304

Source: Solanum bulbocastanum

Species: Solanum bulbocastanum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357146418|ref|XP_003573985.1| PREDICTED: uncharacterized protein LOC100843789 [Brachypodium distachyon]

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 191/292 (65%), Positives = 211/292 (72%), Gaps = 5/292 (1%)

Query: 1   MPLSSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRK-HSCLT 59
           M ++++ +I+ PT      S+P +Q     F I  S+    G   +     R   H C  
Sbjct: 1   MAMATSYSISNPTF-TSKSSLPNKQVPNWIFPIISSDNGSGGMFTLARRSLRAGFHVC-- 57

Query: 60  NSVSSDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSE 119
            +V+ D N        FPSDY+ELL QAK AAE A KDG +L+EIEFPTAGL SVPGD E
Sbjct: 58  -AVTGDQNTRNVFSANFPSDYTELLLQAKDAAESAFKDGKQLLEIEFPTAGLQSVPGDGE 116

Query: 120 GGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPS 179
           GGIEMTGSM LI EFCD FV  EK TRTRIFFPEANEV FAR+S FEG S KLDYLTKPS
Sbjct: 117 GGIEMTGSMLLIREFCDRFVPAEKTTRTRIFFPEANEVTFARQSAFEGCSLKLDYLTKPS 176

Query: 180 FFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGE 239
            FEDFGFT KVKMADRV+ EDE+FLVAYPYFNVNEMLVVEELYKEAV NT  K+IIFNGE
Sbjct: 177 LFEDFGFTTKVKMADRVQPEDEIFLVAYPYFNVNEMLVVEELYKEAVVNTDRKMIIFNGE 236

Query: 240 LDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGP 291
           LDRIRSGYYP FFYPKLA LSKT  P MET+YYIHNFKG  GG LFR   GP
Sbjct: 237 LDRIRSGYYPPFFYPKLAELSKTFLPKMETVYYIHNFKGSKGGALFRCYPGP 288

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|113208412|gb|ABI34553.1| hypothetical protein SBB1_21t00009 [Solanum bulbocastanum]

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 187/261 (71%), Positives = 200/261 (76%), Gaps = 29/261 (11%)

Query: 61  SVSSDGNNSINVDVPFPSDYSELLDQ----------------------------AKMAAE 92
           S S D   SI  DVPFP DY+ELL Q                            AK A E
Sbjct: 47  SCSGDRAASIGFDVPFPKDYTELLQQVFILFAFSPLKIGGWGSRNRGGITREIKAKEATE 106

Query: 93  LAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFP 152
           LA+KD  +LMEIEFPTAGL SVPGD EGGIEMTGS++LI EFCDL V PEK T+TRIFFP
Sbjct: 107 LALKDNRQLMEIEFPTAGLGSVPGDGEGGIEMTGSIQLIREFCDLLVIPEKATKTRIFFP 166

Query: 153 EANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNV 212
           EANEVKFAR+S+F GASFKLDYLTKPSFFEDFGFTEKVKMADRVK EDELF+VAYPYFNV
Sbjct: 167 EANEVKFARQSIFGGASFKLDYLTKPSFFEDFGFTEKVKMADRVKPEDELFIVAYPYFNV 226

Query: 213 NEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFYPKLAALSKTLFPVMETIYY 272
           NEMLVVEELY+ AV NT+ KLIIFNGELDRIRS  YP FFYPKLAALSKTLFP MET+YY
Sbjct: 227 NEMLVVEELYQAAVLNTSRKLIIFNGELDRIRSD-YPPFFYPKLAALSKTLFPKMETVYY 285

Query: 273 IHNFKGRNGGTLFRFLEGPQE 293
           IHNFKGRNGG LFR   GP +
Sbjct: 286 IHNFKGRNGGVLFRCYPGPWK 306

Source: Solanum bulbocastanum

Species: Solanum bulbocastanum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224034407|gb|ACN36279.1| unknown [Zea mays] gi|413926746|gb|AFW66678.1| hypothetical protein ZEAMMB73_267474 [Zea mays]

 Score =  352 bits (904), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 183/283 (64%), Positives = 213/283 (75%), Gaps = 3/283 (1%)

Query: 4   SSNSAIALPTVPIPVPSIPRRQANCRKFSIKCSNENFSGQRIITFSPYRRKHSCLTNSVS 63
           +S  ++A P +    P + ++ +N    +I  SN N +G  + T +  + ++     +V+
Sbjct: 5   TSYGSMANPPITSRTPFLSKQASNWIPATI--SNGNGTGG-MFTVASRKSRNGFQFCAVT 61

Query: 64  SDGNNSINVDVPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIE 123
            D  +    DV FPSDY+ELL QAK AAE A KDG +L+EIEFPTAGL +VPGD EGG E
Sbjct: 62  GDPGSRNVSDVNFPSDYTELLTQAKEAAESAFKDGKQLLEIEFPTAGLQTVPGDGEGGNE 121

Query: 124 MTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFED 183
           MTGSM LI EFCD FV  EK TRTR+FFPEANEV FAR+S FEG S KLDYLTKPS FED
Sbjct: 122 MTGSMLLIREFCDRFVPAEKATRTRVFFPEANEVSFARQSAFEGCSLKLDYLTKPSLFED 181

Query: 184 FGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRI 243
           FGFT KVKMADRVK +DE FLVAYPYFNVNEMLVVEELYKEAV  T+ KLIIFNGELDRI
Sbjct: 182 FGFTTKVKMADRVKPQDETFLVAYPYFNVNEMLVVEELYKEAVVGTSRKLIIFNGELDRI 241

Query: 244 RSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFR 286
           RSGYYP+FFYPKLA LSKT  P ++T+YYIHNFKG  GGTLFR
Sbjct: 242 RSGYYPAFFYPKLAELSKTFLPKLDTVYYIHNFKGAKGGTLFR 284

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18422955|ref|NP_568702.1| uncharacterized protein [Arabidopsis thaliana] gi|14326508|gb|AAK60299.1|AF385707_1 AT5g48790/K24G6_12 [Arabidopsis thaliana] gi|18700216|gb|AAL77718.1| AT5g48790/K24G6_12 [Arabidopsis thaliana] gi|332008342|gb|AED95725.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  350 bits (899), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 174/234 (74%), Positives = 192/234 (82%), Gaps = 1/234 (0%)

Query: 61  SVSSDGNNSINVD-VPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSE 119
           SVS   NN+ +VD VPFP DY EL++QAK A E+A+KD  +LMEIEFPT+GL SVPGD E
Sbjct: 51  SVSGGYNNNTSVDNVPFPRDYVELINQAKEAVEMALKDEKQLMEIEFPTSGLASVPGDGE 110

Query: 120 GGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPS 179
           G  EMT S+ +I EFCD  + PEK   TRIFFPEANEVKFA+K+VF G  FKLDYLTKPS
Sbjct: 111 GATEMTESINMIREFCDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPS 170

Query: 180 FFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGE 239
            FEDFGF E+VKMADRVK EDELFLVAYPYFNVNEMLVVEELYKEAV NT  KLIIFNGE
Sbjct: 171 LFEDFGFFERVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTDRKLIIFNGE 230

Query: 240 LDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGPQE 293
           LDRIRSGYYP FFYPKLAAL+KTL P MET+YYIHNFKG+ GG LFR   GP +
Sbjct: 231 LDRIRSGYYPKFFYPKLAALTKTLLPKMETVYYIHNFKGQKGGVLFRCYPGPWQ 284

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
TAIR|locus:2156504	316	AT5G48790 "AT5G48790" [Arabido	0.783	0.731	0.75	1.2e-88

TAIR|locus:2156504 AT5G48790 "AT5G48790" [Arabidopsis thaliana (taxid:3702)]

 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 174/232 (75%), Positives = 191/232 (82%)

Query:    61 SVSSDGNNSINVD-VPFPSDYSELLDQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSE 119
             SVS   NN+ +VD VPFP DY EL++QAK A E+A+KD  +LMEIEFPT+GL SVPGD E
Sbjct:    51 SVSGGYNNNTSVDNVPFPRDYVELINQAKEAVEMALKDEKQLMEIEFPTSGLASVPGDGE 110

Query:   120 GGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPS 179
             G  EMT S+ +I EFCD  + PEK   TRIFFPEANEVKFA+K+VF G  FKLDYLTKPS
Sbjct:   111 GATEMTESINMIREFCDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPS 170

Query:   180 FFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGE 239
              FEDFGF E+VKMADRVK EDELFLVAYPYFNVNEMLVVEELYKEAV NT  KLIIFNGE
Sbjct:   171 LFEDFGFFERVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTDRKLIIFNGE 230

Query:   240 LDRIRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGP 291
             LDRIRSGYYP FFYPKLAAL+KTL P MET+YYIHNFKG+ GG LFR   GP
Sbjct:   231 LDRIRSGYYPKFFYPKLAALTKTLLPKMETVYYIHNFKGQKGGVLFRCYPGP 282


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      295       295   0.00092  115 3  11 22  0.37    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  199 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.07u 0.13s 24.20t   Elapsed:  00:00:02
  Total cpu time:  24.07u 0.13s 24.20t   Elapsed:  00:00:02
  Start:  Fri May 10 04:30:33 2013   End:  Fri May 10 04:30:35 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0015979 "photosynthesis" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00038743001	SubName- Full=Chromosome chr2 scaffold_97, whole genome shotgun sequence; (322 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00026253001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (330 aa)				•					0.438
	GSVIVG00011932001	SubName- Full=Chromosome undetermined scaffold_2569, whole genome shotgun sequence; (393 aa)				•					0.428
	GSVIVG00037644001	SubName- Full=Chromosome chr9 scaffold_90, whole genome shotgun sequence; (395 aa)				•					0.427
	GSVIVG00024719001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (396 aa)				•					0.423
	GSVIVG00020753001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (448 aa)				•					0.419
	GSVIVG00023298001	SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (264 aa)				•					0.415
	GSVIVG00017591001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (399 aa)				•					0.405
	GSVIVG00020113001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (218 aa)				•					0.404
	GSVIVG00014438001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (180 aa)				•					0.404
	GSVIVG00025052001	SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (226 aa)				•					0.403

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	295
pfam09353	205	pfam09353, DUF1995, Domain of unknown function (DU	5e-23

>gnl|CDD|220198 pfam09353, DUF1995, Domain of unknown function (DUF1995)

 Score = 93.5 bits (233), Expect = 5e-23
 Identities = 49/213 (23%), Positives = 76/213 (35%), Gaps = 44/213 (20%)

Query: 76  FPSDYSELLDQAKMAAELAVKDGMK--LMEIEFPTAGLDSVPGDSEGGIEMTGSMRLICE 133
            P+D  E  +QAK A   A+KDG     +E+ FP   L            M  ++RL   
Sbjct: 1   LPADLEEAEEQAKEALLAALKDGKTRLQVELRFPGLKL------------MPLALRLARA 48

Query: 134 FCDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMA 193
                   E+  R  + FP+A     AR+  +   +FK+  L+     ED          
Sbjct: 49  LA------EEGRRLLVVFPDAGAAALARRD-WGDLAFKILSLSDRKLSEDESKI------ 95

Query: 194 DRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKLIIFNGELDRIRSGYYPSFFY 253
                +D L LVA    ++ E+  + EL           +I+ N  L+   +        
Sbjct: 96  -----DDILILVAPQPSDLEEVEALCELAGGRP------VIMLNPRLE--DAAAVG--IG 140

Query: 254 PKLAALSKTLFPVMETIYYIHNFKGRNGGTLFR 286
                  +      E  YY+   +   GG LFR
Sbjct: 141 SVARERRRRFLSTWEVAYYLRPLER--GGALFR 171

This family of proteins are functionally uncharacterized. Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
PF09353	209	DUF1995: Domain of unknown function (DUF1995); Int	100.0
PLN02842	505	nucleotide kinase	100.0

>PF09353 DUF1995: Domain of unknown function (DUF1995); InterPro: IPR018962 This family of proteins are functionally uncharacterised

Probab=100.00  E-value=6.8e-43  Score=311.19  Aligned_cols=180  Identities=31%  Similarity=0.486  Sum_probs=148.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHcCCce--EEEeecCCCCCCCCCCCCCcccccchHHHHHHHHhhcCCCCCCceEEEEecC
Q 022528           76 FPSDYSELLDQAKMAAELAVKDGMKL--MEIEFPTAGLDSVPGDSEGGIEMTGSMRLICEFCDLFVTPEKVTRTRIFFPE  153 (295)
Q Consensus        76 ~P~sy~e~v~QA~~Av~~AL~DG~~l--lEVEFP~~~~~s~~Gd~eg~ie~n~~~~lar~f~~~f~~~~~g~rvri~FPD  153 (295)
                      ||.||+|++.||++|+++||+||.+|  |||+||.+    .+          ..++++++|++.|.  +.+++++++|||
T Consensus         1 lP~s~~ea~~qA~~Av~~Al~~g~~r~~ve~~fP~l----~~----------~~~~la~~~~~~l~--~~~~~~~~~~pd   64 (209)
T PF09353_consen    1 LPSSLEEAVEQAAEAVQAALEDGDSRQLVELEFPGL----NP----------SNMPLAREFARKLA--ASGRRVRVVFPD   64 (209)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEECCCc----ch----------hHHHHHHHHHHHHH--hcCceEEEEcCC
Confidence            79999999999999999999988766  99999855    11          22788888888885  467999999999


Q ss_pred             hHHHHHHHhhhcCCCeeeeeccCCCCcccccCCcccccccccCCCCCeEEEEEecCCCchhHHHHHHHHHHhhhCCCeeE
Q 022528          154 ANEVKFARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVNEMLVVEELYKEAVFNTAWKL  233 (295)
Q Consensus       154 ~~eaalAr~~~f~g~~f~ld~l~k~s~~~~~G~~~r~~~~drv~~eDeifVvv~P~~s~~El~~VEkl~e~~~~~~~rPl  233 (295)
                      ++|+++|+ +.|++.++++.++.+.....           +. ...|+++|||+|..  .|+..+|++|+.   ..+||+
T Consensus        65 ~g~~alA~-~~~~~~~~~~~~l~~~~~~~-----------~~-~~~~~~~vvv~p~~--~~l~~~e~~~~~---~~~rpv  126 (209)
T PF09353_consen   65 AGEAALAR-RDWGDGSFKIASLDDWSSSE-----------DE-SKFDDILVVVAPSP--QELDDVEKLCEA---AGGRPV  126 (209)
T ss_pred             hHHHHHHh-ccccCCCeEEeeccCccccc-----------cc-cccCCEEEEEECCh--hhHHHHHHHHHh---cCCCeE
Confidence            99999999 58898988886554421100           00 01179999999854  899999999999   677999


Q ss_pred             EEEccchhhhh-cCCCCCccchHHHHHHHhhccCcceEEEEeecCCCCceeEEeecCCCCcC
Q 022528          234 IIFNGELDRIR-SGYYPSFFYPKLAALSKTLFPVMETIYYIHNFKGRNGGTLFRFLEGPQES  294 (295)
Q Consensus       234 Vl~N~eLd~vR-~gy~p~~F~p~~r~L~~rFLs~fe~VYYlrn~~g~~~GaLFR~YPGpWQv  294 (295)
                      ||||++||++| .|   .+|.+  |++|++||++||+||||||+.....|+|||||||||||
T Consensus       127 vl~Np~l~~~~~~g---~g~~~--r~~~~~Fl~~fe~vY~l~~l~~~~~gal~r~yP~~Wqv  183 (209)
T PF09353_consen  127 VLLNPQLEDVRSVG---FGFPG--RKLRERFLSSFETVYYLRPLRISGNGALFRCYPGPWQV  183 (209)
T ss_pred             EEEecccccCCccc---ccccc--HHHHHHHHhhceEEEEEEeeccCCcEEEEEeCCCCcEE
Confidence            99999999999 55   34444  99999999999999999999654469999999999997

>PLN02842 nucleotide kinase

Probab=100.00  E-value=5.1e-34  Score=284.96  Aligned_cols=172  Identities=16%  Similarity=0.115  Sum_probs=143.9

Q ss_pred             HHHHHHHHHHHHcCCceEEEeecCCCCCCCCCCCCCcccccch---------HHHHHHHHhhcCCCCCCceEEEEecC-h
Q 022528           85 DQAKMAAELAVKDGMKLMEIEFPTAGLDSVPGDSEGGIEMTGS---------MRLICEFCDLFVTPEKVTRTRIFFPE-A  154 (295)
Q Consensus        85 ~QA~~Av~~AL~DG~~llEVEFP~~~~~s~~Gd~eg~ie~n~~---------~~lar~f~~~f~~~~~g~rvri~FPD-~  154 (295)
                      .+|.+||++||+||++||+||+-.+             |+|.+         |+|+|+|+..|.  +.|+++||+||| +
T Consensus       245 ~~~~~a~~~a~~~g~~r~~~~~~~p-------------el~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~kv~~~~~~  309 (505)
T PLN02842        245 DDVLQATQRAVNDGRTRLKVEINIP-------------ELNPEMDVYRIGTLMELVRVLALSFA--DDGKRVKVCVQGSM  309 (505)
T ss_pred             HHHHHHHHHHHhCCcceEEEEEecC-------------ccccccccccchhHHHHHHHHHHHHh--hcCCceEEEecCCc
Confidence            4789999999999999988876666             44443         789999999995  789999999999 9


Q ss_pred             HHHHH--------------HHhhhcCCCeeeeeccCCCCcccccCCcccccccccCCCCCeEEEEEecCCCch---hHHH
Q 022528          155 NEVKF--------------ARKSVFEGASFKLDYLTKPSFFEDFGFTEKVKMADRVKLEDELFLVAYPYFNVN---EMLV  217 (295)
Q Consensus       155 ~eaal--------------Ar~~~f~g~~f~ld~l~k~s~~~~~G~~~r~~~~drv~~eDeifVvv~P~~s~~---El~~  217 (295)
                      |+++|              |+ .+|++.+|+=++      .+--++++     ++++++|++||+|.|.. .+   |+++
T Consensus       310 g~~~~~~~~~~~~~~~~~~~~-~dw~~~~~~~~~------~~~~~~~~-----~~~~~~d~~~i~v~P~~-~v~~~~~~~  376 (505)
T PLN02842        310 GEGALAGMPLQLAGTRKILEF-MDWGDYGAKGTF------VKIGAIGA-----KEVDEEDDMFILVAPQN-AVGNCIIDD  376 (505)
T ss_pred             chhHhccCccccccchhhhhh-cccccccccccc------eeeccccc-----CCCCCCCcEEEEEcCCc-cccccchHH
Confidence            99999              99 799998873322      11133444     56789999999999964 24   9999


Q ss_pred             HHHHHHHhhhCCCeeEEEEccchhhh----hcC-CCCCccchHHHHHHHhhccCcceEEEEeecCCC-----CceeEEee
Q 022528          218 VEELYKEAVFNTAWKLIIFNGELDRI----RSG-YYPSFFYPKLAALSKTLFPVMETIYYIHNFKGR-----NGGTLFRF  287 (295)
Q Consensus       218 VEkl~e~~~~~~~rPlVl~N~eLd~v----R~g-y~p~~F~p~~r~L~~rFLs~fe~VYYlrn~~g~-----~~GaLFR~  287 (295)
                      ||++|+.   +++||+||+||+|+++    .+| |.       +|++|++|+++||+|||+||+...     -.|||+|+
T Consensus       377 ~e~~~~~---~~~rpvillnp~LeD~~~~vGig~~~-------~R~~R~~f~~t~~~~Y~~~~l~~~~~~~~~~gal~~~  446 (505)
T PLN02842        377 LQAMTTA---AGKRPVILVNPRLKDLPGSSGIMQTM-------GREQRLEYAASFENCYSFRLLYYAGTQYPIMGALRMS  446 (505)
T ss_pred             HHHHHHH---hCCCeEEEECCcccccccccchhHHH-------HHHHHHHHHHHhhheeEEEeccccccccccceeeeec
Confidence            9999999   9999999999999996    366 64       699999999999999999998432     23999999


Q ss_pred             cCCCCcC
Q 022528          288 LEGPQES  294 (295)
Q Consensus       288 YPGpWQv  294 (295)
                      ||++||+
T Consensus       447 yp~~w~l  453 (505)
T PLN02842        447 YPYRYEL  453 (505)
T ss_pred             CCCCeeE
Confidence            9999996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	295
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 35/297 (11%), Positives = 83/297 (27%), Gaps = 86/297 (28%)

Query: 43  QRIITFSPYRRKHSCLTNSVS--SDGNNSINVDVPFPSDYSEL---LDQAKMAAELAVKD 97
           Q  +    Y  +   L N     +  N      V     Y +L   L + + A  + + D
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYN------VSRLQPYLKLRQALLELRPAKNVLI-D 156

Query: 98  GMK------L---------MEIEFP------TAGLDSVPGDSEGGIEMTGSM--RLICEF 134
           G+       +         ++ +             + P      +EM   +  ++   +
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV---LEMLQKLLYQIDPNW 213

Query: 135 CDLFVTPEKVTRTRIFFPEANEVKFARKSVFEGASFK-----LDYLTKPSFFEDFGF--- 186
                  +  +  ++     + ++   + + +   ++     L  +     +  F     
Sbjct: 214 TSR---SDHSSNIKL---RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK 267

Query: 187 ----TEKVKMAD--------RVKLED-----------ELFLVAYPYFNVNEMLVVEELYK 223
               T   ++ D         + L+             L L    Y +       ++L +
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL---KYLDCR----PQDLPR 320

Query: 224 EAVFNTAWKLIIFNGELDR---IRSGYYPSFFYPKLAALSKTLFPVMETIYYIHNFK 277
           E +     +L I   E  R        +      KL  + ++   V+E   Y   F 
Sbjct: 321 EVLTTNPRRLSII-AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00