Citrus Sinensis ID: 022548

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MESNPPQPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRNAVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVWGN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEcccccccccccccccc
Coil and Loop (DISEMBL)
mesnppqppasspppkpweragaasgptpfkppsagntsdvvessgtanpgeivsasdrtatvnrnavgrplpsrpweqnygstsyggtnnyggygstmnynsslgsgmygsygggtyggglygggmygnsmyrggygglygssgmygggmynsgfggpmggygmgmggpyggaqdpndpygapssppgfWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGiktkpkkvngpngpplpgpnnmhgnqnflegpkaapgeawdnvwgn
Flexible Loop (DISEMBL)
mesnppqppasspppkpWERAGAASGPTPFKPPSAGNTSDVVESSGTanpgeivsasdrtatvnrnavgrplpsrpweqnYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGiktkpkkvngpnGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVWGN
Low Complexity Region (SEG)
MEsnppqppasspppkpWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRNAVGRPLPSRPWEQnygstsyggtnnyggygstmnynsslgsgmygsygggtyggglygggmygnsmyrggygglygssgmygggmynsgfggpmggygmgmggpyggAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPKKVngpngpplpgpnnmhgnQNFLEGPKAAPGEAWDNVWGN
Disordered region (IsUnstruct)
*************************************************************************************YGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGM***********************GFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGIK********************************************
Disordered Region (DISOPRED)
****************************************************************************************TNNYGGYGSTMNYNSS************************************************************************************GFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGI*************************************AWD*VWG*
Disordered Region (DISEMBL)
**************************PTPFK****************ANPGEIVSASDRTATVNRNAVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVWGN
Disordered Region (DISPRO)
********************************************************************GRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPKK****NGPPLP*************GPKAAPG**W******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MESNPPQPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRNAVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVWGN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	295	2.2.26 [Sep-21-2011]
Q9SRR0	304	Peroxisomal membrane prot	yes	no	0.406	0.394	0.720	1e-46

>sp|Q9SRR0|PEX13_ARATH Peroxisomal membrane protein 13 OS=Arabidopsis thaliana GN=PEX13 PE=1 SV=1

 Score =  187 bits (474), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/129 (72%), Positives = 108/129 (83%), Gaps = 9/129 (6%)

Query: 174 AQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRS 233
           +QDPNDP+  P SPPGFWIS LRVMQG VNFFGR+++LIDQNTQAFH+FM+ALLQLFDR 
Sbjct: 178 SQDPNDPFNQPPSPPGFWISFLRVMQGAVNFFGRVAMLIDQNTQAFHMFMSALLQLFDRG 237

Query: 234 GMLYGELARFVLRLLGIKTKPKKV----NGPNGPPLPGPNNMHGNQNFLEGPK-AAP--G 286
           GMLYGELARFVLR+LG++T+P+K+     GPNG  LP P+  HGNQN+LEGPK AAP  G
Sbjct: 238 GMLYGELARFVLRMLGVRTRPRKMQQPPQGPNG--LPLPHQPHGNQNYLEGPKTAAPGGG 295

Query: 287 EAWDNVWGN 295
             WDNVWGN
Sbjct: 296 GGWDNVWGN 304


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.138    0.438 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,370,392
Number of Sequences: 539616
Number of extensions: 8415656
Number of successful extensions: 77009
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 1181
Number of HSP's that attempted gapping in prelim test: 35576
Number of HSP's gapped (non-prelim): 15471
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)

Involved in PTS1- and PTS2-dependent protein import into peroxisomes. Acts as a docking factor on peroxisomal membranes. Required for the proper targeting of PEX7 to the peroxisome. Required for the export/release of receptors on the peroxisome membrane.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
356556979	297	PREDICTED: uncharacterized protein LOC10	0.952	0.946	0.760	2e-95
449468866	298	PREDICTED: uncharacterized protein LOC10	0.983	0.973	0.71	2e-88
356550402	301	PREDICTED: uncharacterized protein LOC10	0.952	0.933	0.746	1e-83
255637426	301	unknown [Glycine max]	0.952	0.933	0.743	1e-82
356538873	280	PREDICTED: uncharacterized protein LOC10	0.922	0.971	0.737	3e-80
171988286	299	peroxisome biogenesis factor 13 [Nicotia	0.972	0.959	0.671	4e-78
448872688	284	putative peroxisome biogenesis factor 13	0.935	0.971	0.686	1e-74
116792570	295	unknown [Picea sitchensis]	0.925	0.925	0.560	7e-64
357112636	269	PREDICTED: uncharacterized protein LOC10	0.857	0.940	0.546	1e-58
255641843	216	unknown [Glycine max]	0.688	0.939	0.757	9e-58

>gi|356556979|ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788885 [Glycine max]

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 225/296 (76%), Positives = 245/296 (82%), Gaps = 15/296 (5%)

Query: 7   QPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRN 66
           QP A+SPPPKPWE+AG++SGP PFKPPSAGNTSDVVE+SGTA PGEIVS+SDR+A VNRN
Sbjct: 6   QPQANSPPPKPWEQAGSSSGPAPFKPPSAGNTSDVVEASGTAKPGEIVSSSDRSAAVNRN 65

Query: 67  AVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGG 126
            +GRP+PSRPWEQNYG+++YGG      YGSTMNYNS  GSGMYGS  GG  GG      
Sbjct: 66  TLGRPVPSRPWEQNYGNSTYGG------YGSTMNYNSGYGSGMYGSSYGGLGGGMYGSSY 119

Query: 127 MYG---NSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGA 183
             G   NSMYRGGYGGL+GSSGMYGGGMYNS  GGP+GGYGMG G    G QDPNDP+GA
Sbjct: 120 GGGMYGNSMYRGGYGGLHGSSGMYGGGMYNSALGGPIGGYGMGGGP--YGDQDPNDPFGA 177

Query: 184 PSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF 243
           P SPPGFWIS LRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF
Sbjct: 178 PPSPPGFWISVLRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF 237

Query: 244 VLRLLGIKTKPKKVN--GPNGPPL--PGPNNMHGNQNFLEGPKAAPGEAWDNVWGN 295
           VLRLLGI+TK KKV   GPNG PL  PGP+N  GN N++E PKAAP  +WDNVWGN
Sbjct: 238 VLRLLGIRTKSKKVYPPGPNGQPLLGPGPHNPSGNVNYIEAPKAAPSGSWDNVWGN 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468866|ref|XP_004152142.1| PREDICTED: uncharacterized protein LOC101221260 [Cucumis sativus] gi|449515057|ref|XP_004164566.1| PREDICTED: uncharacterized LOC101221260 [Cucumis sativus]

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 213/300 (71%), Positives = 235/300 (78%), Gaps = 10/300 (3%)

Query: 1   MESNPPQPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRT 60
           M+S PPQP AS+PPPKPWERAG +SG  PF+PPSAGNTSDVVE+SGTA PGEIVS+SDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  ATVNRNAVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGG 120
           A VNRN++GRP+P+RPWEQNYG+ SYGG    G YGSTMN +         S  GG   G
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGG----GAYGSTMNNSLYGSGMYGSSSYGGGMYG 116

Query: 121 GLYGGG-----MYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQ 175
           G   G        G      G  G+YG+SGMYGGGMYNSGFGGPMGGYGMGMGG   G Q
Sbjct: 117 GGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGG-PYGGQ 175

Query: 176 DPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGM 235
           DPNDPYG PSSPPGFW+S LRVM GVVNFFGRISILIDQNTQAFH+FMTALLQLFDRSGM
Sbjct: 176 DPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGM 235

Query: 236 LYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVWGN 295
           LYGELARFVLRLLGIKTKP+KV GP+G P+PG  + H +QN +EGPK AP  AWDNVW N
Sbjct: 236 LYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPN 295

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550402|ref|XP_003543576.1| PREDICTED: uncharacterized protein LOC100775500 [Glycine max]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 224/300 (74%), Positives = 244/300 (81%), Gaps = 19/300 (6%)

Query: 7   QPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRN 66
           QP A+SPPPKPWE+AG++SGP PFKPPSAGNTSDVVE+SGTA PGEIVS+SDR+A VNRN
Sbjct: 6   QPQANSPPPKPWEQAGSSSGPAPFKPPSAGNTSDVVEASGTAKPGEIVSSSDRSAAVNRN 65

Query: 67  AVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGG 126
            +GRP+P+RPWEQNYG+++YGG      YGSTMNYNS  GSGMYGS  GG  GG      
Sbjct: 66  TLGRPVPTRPWEQNYGNSTYGG------YGSTMNYNSGYGSGMYGSSYGGLGGGMYGSSY 119

Query: 127 MYG---NSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGA 183
             G   NSMYRGGYGG+YGSSGMYGGGMYNSG GGPMGGYGMG G    G QDPN+PYGA
Sbjct: 120 GGGMYGNSMYRGGYGGMYGSSGMYGGGMYNSGLGGPMGGYGMGGGP--YGEQDPNNPYGA 177

Query: 184 PSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF 243
           P SPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF
Sbjct: 178 PPSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF 237

Query: 244 VLRLLGIKTKPKKVN--------GPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVWGN 295
           VLRLLGIKTK KKV+         P   P PGP+N  GN N++E PKAAP  +WDNVWGN
Sbjct: 238 VLRLLGIKTKSKKVHPPGPNGQPLPGPGPGPGPHNPSGNVNYIEAPKAAPSGSWDNVWGN 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637426|gb|ACU19041.1| unknown [Glycine max]

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 223/300 (74%), Positives = 243/300 (81%), Gaps = 19/300 (6%)

Query: 7   QPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRN 66
           QP A+SPP KPWE+AG++SGP PFKPPSAGNTSDVVE+SGTA PGEIVS+SDR+A VNRN
Sbjct: 6   QPQANSPPLKPWEQAGSSSGPAPFKPPSAGNTSDVVEASGTAKPGEIVSSSDRSAAVNRN 65

Query: 67  AVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGG 126
            +GRP+P+RPWEQNYG+++YGG      YGSTMNYNS  GSGMYGS  GG  GG      
Sbjct: 66  TLGRPVPTRPWEQNYGNSTYGG------YGSTMNYNSGYGSGMYGSSYGGLGGGMYGSSY 119

Query: 127 MYG---NSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGA 183
             G   NSMYRGGYGG+YGSSGMYGGGMYNSG GGPMGGYGMG G    G QDPN+PYGA
Sbjct: 120 GGGMYGNSMYRGGYGGMYGSSGMYGGGMYNSGLGGPMGGYGMGGGP--YGEQDPNNPYGA 177

Query: 184 PSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF 243
           P SPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF
Sbjct: 178 PPSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF 237

Query: 244 VLRLLGIKTKPKKVN--------GPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVWGN 295
           VLRLLGIKTK KKV+         P   P PGP+N  GN N++E PKAAP  +WDNVWGN
Sbjct: 238 VLRLLGIKTKSKKVHPPGPNGQPLPGPGPGPGPHNPSGNVNYIEAPKAAPSGSWDNVWGN 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538873|ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820349 [Glycine max]

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 213/289 (73%), Positives = 235/289 (81%), Gaps = 17/289 (5%)

Query: 9   PASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRNAV 68
           P+ S PPKPWE+A ++SGP PFKPPSAG+TSDVVE+SGTA PGEIV ASD+TATVNRNA+
Sbjct: 3   PSVSAPPKPWEKAASSSGPAPFKPPSAGSTSDVVEASGTAKPGEIVPASDKTATVNRNAL 62

Query: 69  GRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMY 128
           GRPLP+RPWEQN GSTSYGG      YGSTMNYNS  GS        G    G       
Sbjct: 63  GRPLPTRPWEQNNGSTSYGG------YGSTMNYNSGYGSYGGVGGLYGGGMYG------- 109

Query: 129 GNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGAPSSPP 188
            +SMYRGGYGGLYGSSGMYGGGMYN GFGGPMGGYGMG GG   GA+DPN+PYG PSSPP
Sbjct: 110 -SSMYRGGYGGLYGSSGMYGGGMYNGGFGGPMGGYGMGGGG-PYGAEDPNNPYGVPSSPP 167

Query: 189 GFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLL 248
           GFWIS +RVMQGVVNFFGRIS+LIDQNTQAFH+FMTALLQLFDRSG+LYGELARFVLRLL
Sbjct: 168 GFWISFMRVMQGVVNFFGRISMLIDQNTQAFHMFMTALLQLFDRSGVLYGELARFVLRLL 227

Query: 249 GIKTKPKKVN--GPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVWGN 295
           GI+TKPKK+N  GP+G PLPG +N   NQNF+EG K AP  +WDNVW N
Sbjct: 228 GIRTKPKKINPPGPDGLPLPGQHNSSVNQNFIEGTKPAPSGSWDNVWEN 276

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|171988286|gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 204/304 (67%), Positives = 236/304 (77%), Gaps = 17/304 (5%)

Query: 1   MESNPPQPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRT 60
           M++ PPQP  +SPPPKPWERAG++SGPTPFKPPS+GNTSDVVE+SGTA PGEIVS ++R 
Sbjct: 1   MDNGPPQPSGNSPPPKPWERAGSSSGPTPFKPPSSGNTSDVVEASGTARPGEIVSTANRN 60

Query: 61  ATVNRNAVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGG 120
            TVN + + RP+P RPWEQ     +YG     GGY + MNYNS  G+GMYGS  GG YG 
Sbjct: 61  TTVNNSTLARPVPPRPWEQ---QQTYGS----GGYNTGMNYNSGYGTGMYGSSYGGGYGS 113

Query: 121 GLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGA------ 174
              G G+YGNSMYRGGYGGL G     GGGMYNSGFGG MGGYGMGMG    G       
Sbjct: 114 TY-GSGLYGNSMYRGGYGGLAGGGMYGGGGMYNSGFGGSMGGYGMGMGMGGMGGMGGMGG 172

Query: 175 ---QDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFD 231
              QDPN+P+GAPSSPPGFW+S + VMQGVV FFGR+++LIDQNTQAFH+ M+A+LQLFD
Sbjct: 173 FGDQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAMLQLFD 232

Query: 232 RSGMLYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDN 291
           RSGMLYGELARFVLRLLG+KTKP KV+ P    LPGP++ HGNQNF+EGPKAAP   WDN
Sbjct: 233 RSGMLYGELARFVLRLLGVKTKPNKVHPPGPGALPGPHHPHGNQNFIEGPKAAPSAGWDN 292

Query: 292 VWGN 295
           VWG+
Sbjct: 293 VWGD 296

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|448872688|gb|AGE46029.1| putative peroxisome biogenesis factor 13 [Elaeis guineensis]

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 204/297 (68%), Positives = 233/297 (78%), Gaps = 21/297 (7%)

Query: 1   MESNPPQPPASSPPPKPWERAGAASGP-TPFKPPSAGNTSDVVESSGTANPGEIVSASDR 59
           M SN P+P   +PPPKPWERA   SGP  PFKPPS+G+TSD+VE+SGTA PGE V +++R
Sbjct: 1   MGSNSPRP-GDAPPPKPWERATTTSGPPAPFKPPSSGSTSDIVEASGTAKPGEAVPSTER 59

Query: 60  TATVNRNAVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYG 119
           +   NRN +GRPLPSRPW+QNYG++       YGGYGS +NYNS  GSGMY SYGG    
Sbjct: 60  SVLPNRNTIGRPLPSRPWQQNYGTS-------YGGYGSNINYNSGYGSGMYSSYGGFGGS 112

Query: 120 GGLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPND 179
           GGLYG  MY       GYGGLYG+SGMY G MYNSGFGG MGGYGMGMGGPYG   DPN+
Sbjct: 113 GGLYGNNMYS------GYGGLYGNSGMYPGSMYNSGFGGAMGGYGMGMGGPYGNP-DPNN 165

Query: 180 PYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGE 239
           PYG PSSPPGFW+S +RVMQGVVNFFGRISILIDQNTQAFH+FM+ALLQLFDRSG+LYGE
Sbjct: 166 PYGPPSSPPGFWMSFIRVMQGVVNFFGRISILIDQNTQAFHMFMSALLQLFDRSGLLYGE 225

Query: 240 LARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGN-QNFLEGPKAAPGEAWDNVWGN 295
           LARFVLRLLGIKT+ +K        LPGP+   GN Q+++EGPKAA G +WDNVWGN
Sbjct: 226 LARFVLRLLGIKTRSRKHPQLEPGRLPGPD---GNGQHYIEGPKAATG-SWDNVWGN 278

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116792570|gb|ABK26417.1| unknown [Picea sitchensis]

 Score =  249 bits (637), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 167/298 (56%), Positives = 192/298 (64%), Gaps = 25/298 (8%)

Query: 11  SSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRNAVGR 70
           S PPPKPWER G++SGP+PF+PPS G+TS+VVESSG A  GE           NR+ +GR
Sbjct: 6   SVPPPKPWERVGSSSGPSPFRPPSTGSTSNVVESSGVAKIGESSDTERNVPLANRSTIGR 65

Query: 71  PLPSRPWEQNYGSTSYGG----TNNYGGYGSTMNYNSSLGSGMYGS-------YGGGTYG 119
           P+P+RPWEQ     +YGG    TN   GYGST NYNS  GSG+YGS        GG    
Sbjct: 66  PMPARPWEQGSYGGNYGGYGSMTNYNSGYGSTTNYNSGYGSGLYGSNNLYGGMGGGYGAM 125

Query: 120 GGLYGGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPND 179
            G YGGG+YGN+MYRGGYGG   S+   GG   N   G   G      G    G  DPND
Sbjct: 126 SGSYGGGLYGNNMYRGGYGG---SNAFGGGMYNNGMGGPMGGYGMGPGGPYDNGNGDPND 182

Query: 180 PYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGE 239
           P+G P S P FW S LRVM GVV FFGRISIL+DQNTQAFH FMTALLQLFDR+G+LYGE
Sbjct: 183 PFGGPPSAPSFWQSMLRVMHGVVTFFGRISILVDQNTQAFHFFMTALLQLFDRTGVLYGE 242

Query: 240 LARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGN----QNFLEGPKAAPGEAWDNVW 293
           LARFVLRLLGI+TKP+      GP  PGP  + G       ++E PK A G  W+NVW
Sbjct: 243 LARFVLRLLGIRTKPR------GPSRPGPKAIGGQGTPENYYIEEPKEAAG-GWENVW 293

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112636|ref|XP_003558114.1| PREDICTED: uncharacterized protein LOC100844206 [Brachypodium distachyon]

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/289 (54%), Positives = 186/289 (64%), Gaps = 36/289 (12%)

Query: 11  SSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVN-RNAVG 69
           ++PPPKPWER G +SGP PFKPPS G TSD+VE+SGTA PGE+VSA+   A +   N V 
Sbjct: 4   TNPPPKPWERVGTSSGPAPFKPPSGGTTSDIVEASGTAKPGEVVSAAQSNAALGVNNTVS 63

Query: 70  RPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYG 129
           RP+P RPW+Q  G   +G  N+YGGYG++  YNS  G G   S              +YG
Sbjct: 64  RPVPPRPWQQQQG---FG--NSYGGYGAS-TYNSYGGFGGASS-----------SSRLYG 106

Query: 130 NSMYRGGYGGLYGSSG---MYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGAPSS 186
           N+MY G  GG  GS G   MY G  Y++G G P GG GMG   PY   Q P D +G P+ 
Sbjct: 107 NNMYSGYGGGYGGSYGGSGMYAGSTYSNGIGNPYGGMGMG---PYN--QGP-DSFGPPAP 160

Query: 187 PPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLR 246
           PPGFW+S LRVM G+VNF GR++ LI QNTQAFH F+TALLQL D+SGMLY ELARFVLR
Sbjct: 161 PPGFWVSFLRVMHGIVNFSGRVAFLISQNTQAFHSFITALLQLCDKSGMLYSELARFVLR 220

Query: 247 LLGIKTKPKK--VNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDNVW 293
           LLG KTKPKK  V G   P   G       Q F+E PKA    +WDNVW
Sbjct: 221 LLGFKTKPKKGRVQGAESPSFKG-----SGQQFVEEPKA--NNSWDNVW 262

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255641843|gb|ACU21190.1| unknown [Glycine max]

 Score =  229 bits (585), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 162/214 (75%), Positives = 176/214 (82%), Gaps = 11/214 (5%)

Query: 7   QPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRTATVNRN 66
           QP A+SPPPKPWE+AG+ SGP PFKPPSAGNTSDVVE+SGTA PGEIVS+SDR+A VNRN
Sbjct: 6   QPQANSPPPKPWEQAGSPSGPAPFKPPSAGNTSDVVEASGTAKPGEIVSSSDRSAAVNRN 65

Query: 67  AVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGM---YGSYGGGTYGGGLY 123
            +GRP+PSRPW QNYG+++      YGGYGSTMNYNS  GSGM        GG   G  Y
Sbjct: 66  TLGRPVPSRPWGQNYGNST------YGGYGSTMNYNSGYGSGMYGSSYGGLGGGMYGSSY 119

Query: 124 GGGMYGNSMYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGAQDPNDPYGA 183
           GGGMYGNSMYRGGYGGL+GSSGMYGGGMYNS  GGP+GGYGMG G    G QDPNDP+GA
Sbjct: 120 GGGMYGNSMYRGGYGGLHGSSGMYGGGMYNSALGGPIGGYGMGGGP--YGDQDPNDPFGA 177

Query: 184 PSSPPGFWISALRVMQGVVNFFGRISILIDQNTQ 217
           P SPPGFWIS LRVMQGVVNFFGRISILIDQNTQ
Sbjct: 178 PPSPPGFWISVLRVMQGVVNFFGRISILIDQNTQ 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
TAIR|locus:2079621	304	PEX13 "AT3G07560" [Arabidopsis	0.413	0.401	0.653	7.8e-58

TAIR|locus:2079621 PEX13 "AT3G07560" [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
 Identities = 83/127 (65%), Positives = 97/127 (76%)

Query:   174 AQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRS 233
             +QDPNDP+  P SPPGFWIS LRVMQG VNFFGR+++LIDQNTQAFH+FM+ALLQLFDR 
Sbjct:   178 SQDPNDPFNQPPSPPGFWISFLRVMQGAVNFFGRVAMLIDQNTQAFHMFMSALLQLFDRG 237

Query:   234 GMLYGELARFVLRLLGIKTKPKKVXX--XXXXXXXXXXXXXXXQNFLEGPK-AAPGEA-- 288
             GMLYGELARFVLR+LG++T+P+K+                   QN+LEGPK AAPG    
Sbjct:   238 GMLYGELARFVLRMLGVRTRPRKMQQPPQGPNGLPLPHQPHGNQNYLEGPKTAAPGGGGG 297

Query:   289 WDNVWGN 295
             WDNVWGN
Sbjct:   298 WDNVWGN 304

GO:0005515 "protein binding" evidence=IPI

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA;IDA;IMP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP

GO:0006605 "protein targeting" evidence=RCA

GO:0006869 "lipid transport" evidence=RCA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0010351 "lithium ion transport" evidence=RCA

GO:0044265 "cellular macromolecule catabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SRR0	PEX13_ARATH	No assigned EC number	0.7209	0.4067	0.3947	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Sb02g003110.1 annotation not avaliable (277 aa) (Sorghum bicolor)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	295
PTZ00110	545	PTZ00110, PTZ00110, helicase; Provisional	7e-05
PTZ00110	545	PTZ00110, PTZ00110, helicase; Provisional	8e-05
PTZ00473	420	PTZ00473, PTZ00473, Plasmodium Vir superfamily; Pr	8e-04
COG5281	833	COG5281, COG5281, Phage-related minor tail protein	0.004

>gnl|CDD|240273 PTZ00110, PTZ00110, helicase; Provisional

 Score = 44.0 bits (104), Expect = 7e-05
 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 9/81 (11%)

Query: 77  WEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGG 136
              + GS S G +NNY  YG   + ++      YG+Y         YGG   G   Y GG
Sbjct: 6   GSSSNGSVSSGPSNNYNSYGPYPDSSNP-----YGNYQANHQDN--YGGFRPGYGNYSGG 58

Query: 137 YGGLYGSSGMYGGGMYNSGFG 157
           YGG +G +  YG         
Sbjct: 59  YGG-FGMNS-YGSSTLGKRLQ 77

Length = 545

>gnl|CDD|240273 PTZ00110, PTZ00110, helicase; Provisional

 Score = 43.6 bits (103), Expect = 8e-05
 Identities = 23/82 (28%), Positives = 27/82 (32%), Gaps = 14/82 (17%)

Query: 92  YGGYGSTMN----YNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGGYGGLYGSSGMY 147
               GS+ N       S     YG Y   +   G Y         ++  YGG     G Y
Sbjct: 2   RSTDGSSSNGSVSSGPSNNYNSYGPYPDSSNPYGNYQAN------HQDNYGGFRPGYGNY 55

Query: 148 GGGMYNSGFGGPMGGYGMGMGG 169
            GG    GFG  M  YG    G
Sbjct: 56  SGG--YGGFG--MNSYGSSTLG 73

Length = 545

>gnl|CDD|240430 PTZ00473, PTZ00473, Plasmodium Vir superfamily; Provisional

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 27/119 (22%), Positives = 30/119 (25%), Gaps = 8/119 (6%)

Query: 75  RPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYR 134
           R W      +      NYGG     N  S          G        YGG  YG S   
Sbjct: 305 RRWRNMGHDSRGPYNANYGG---QFNSRSGRTGSSESIRGFTYDSSTTYGGSSYGTSQTD 361

Query: 135 GGYGGLYGSSGMYGGGMYNSG--FGGPMGGYGMGMGGP-YGGAQDPNDPYGAPSSPPGF 190
                 YGS   +           GG   G      G   G +      Y  P    GF
Sbjct: 362 S--TSTYGSRSTFDSSTGGGSQSGGGSTYGGSSTFDGSSRGSSDSFGVSYFGPQQTVGF 418

Length = 420

>gnl|CDD|227606 COG5281, COG5281, Phage-related minor tail protein [Function unknown]

 Score = 38.1 bits (88), Expect = 0.004
 Identities = 33/152 (21%), Positives = 51/152 (33%), Gaps = 15/152 (9%)

Query: 96  GSTMNYNSSLGSGMYGSYGGGTYGGGLYGGGMYGNSMYRGGYGGLYGSSGM--YGGGMYN 153
            +       +GS      GG   GGG    G    S++    GG+YGS G+  Y GG+ +
Sbjct: 684 AALQIIVGLVGSAF----GGALSGGGSASTG--AGSVFHFAAGGVYGSGGLPEYAGGVVS 737

Query: 154 SGFGGPMGGYGMGMGGPYGGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILID 213
           S            MG     A  P D         G  ++A     G   F  +  + I 
Sbjct: 738 SPTVFTKAAGLGLMGEAGPEAILPLD--RGSDGKLG--VAAGMGGGGAAVFSPQYHVAIA 793

Query: 214 ---QNTQAFHLFMTALLQLFDRSGMLYGELAR 242
               N Q     + A++    R+   +  +  
Sbjct: 794 NDGTNGQIGPQALKAVVDRGARAAQDFMRIQG 825

Length = 833

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
KOG3875	362	consensus Peroxisomal biogenesis protein peroxin [	99.92
PF04088	158	Peroxin-13_N: Peroxin 13, N-terminal region; Inter	99.91
KOG3875	362	consensus Peroxisomal biogenesis protein peroxin [	97.51
KOG0921	1282	consensus Dosage compensation complex, subunit MLE	95.26
PF04088	158	Peroxin-13_N: Peroxin 13, N-terminal region; Inter	87.13

>KOG3875 consensus Peroxisomal biogenesis protein peroxin [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.92  E-value=2.8e-24  Score=203.76  Aligned_cols=80  Identities=21%  Similarity=0.322  Sum_probs=66.0

Q ss_pred             CCCCCCCC---CCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Q 022548          175 QDPNDPYG---APSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF--------  243 (295)
Q Consensus       175 ~DPn~pfg---e~ts~p~fwqstFq~IeSIV~AFG~fAqMLEST~~A~hsSF~AmlslaDr~G~L~g~Larf--------  243 (295)
                      ++|+++|+   |+++     +++||+|||||+||++|||||||||+|+|+||+|||+|+|||++||..|.+|        
T Consensus       101 ~np~srf~~~aeess-----r~aFQsIESiV~Av~siA~MLeST~~A~~~SFravi~Vae~F~rLKs~l~s~f~~fAl~r  175 (362)
T KOG3875|consen  101 TNPESRFGLPAEESS-----RGAFQSIESIVGAVGSIAQMLESTFMAVHNSFRAVISVAENFGRLKSSLGSFFGIFALFR  175 (362)
T ss_pred             cCcchhccccccccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55788886   5555     7888999999999999999999999999999999999999999999886555        


Q ss_pred             -HHHHhccccCCCCCCCC
Q 022548          244 -VLRLLGIKTKPKKVNGP  260 (295)
Q Consensus       244 -vlrlLg~~tk~r~~~~~  260 (295)
                       || +|+++++.+.+..|
T Consensus       176 ~lk-~lyR~~l~~L~l~~  192 (362)
T KOG3875|consen  176 RLK-ILYRLLLKMLKLSP  192 (362)
T ss_pred             HHH-HHHHHHHHHhCCCc
Confidence             33 45566666666544

>PF04088 Peroxin-13_N: Peroxin 13, N-terminal region; InterPro: IPR007223 Peroxin-13 is a component of the peroxisomal translocation machinery with Peroxin-14 and Peroxin-17

Probab=99.91  E-value=7.2e-25  Score=189.91  Aligned_cols=65  Identities=17%  Similarity=0.258  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHhccccCCCC
Q 022548          192 ISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGE---------LARFVLRLLGIKTKPKK  256 (295)
Q Consensus       192 qstFq~IeSIV~AFG~fAqMLEST~~A~hsSF~AmlslaDr~G~L~g~---------LarfvlrlLg~~tk~r~  256 (295)
                      |+|||+||+||+||++|||||||||+|+|+||+|||+|||||++||.+         |.||+|+|+.+.++.+.
T Consensus        25 r~tFq~IESIV~Afg~fAqMLESTy~AthsSF~a~v~VAeqF~~Lk~~lgs~l~ifal~R~lk~l~~kl~~~~~   98 (158)
T PF04088_consen   25 RATFQSIESIVGAFGGFAQMLESTYMATHSSFFAMVSVAEQFGRLKNTLGSILGIFALFRWLKWLYRKLLGRLR   98 (158)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            999999999999999999999999999999999999999999999988         56778888876665554

Both termini of Peroxin-13 are oriented to the cytosol. It is required for peroxisomal association of peroxin-14 []. The proteins also contain an SH3 domain (IPR001452 from INTERPRO).; GO: 0016560 protein import into peroxisome matrix, docking, 0005777 peroxisome, 0016021 integral to membrane

>KOG3875 consensus Peroxisomal biogenesis protein peroxin [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.51  E-value=0.0041  Score=60.77  Aligned_cols=47  Identities=26%  Similarity=0.386  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 022548          194 ALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGIKT  252 (295)
Q Consensus       194 tFq~IeSIV~AFG~fAqMLEST~~A~hsSF~AmlslaDr~G~L~g~LarfvlrlLg~~t  252 (295)
                      -|++|-+|++.|+++..+|.+-     +.++|++      .+|| +|-|+|||+|+++.
T Consensus       146 SFravi~Vae~F~rLKs~l~s~-----f~~fAl~------r~lk-~lyR~~l~~L~l~~  192 (362)
T KOG3875|consen  146 SFRAVISVAENFGRLKSSLGSF-----FGIFALF------RRLK-ILYRLLLKMLKLSP  192 (362)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHH------HHHH-HHHHHHHHHhCCCc
Confidence            3566666777777766665543     2333443      3446 88899999998763

>KOG0921 consensus Dosage compensation complex, subunit MLE [Transcription]

Probab=95.26  E-value=0.05  Score=59.63  Aligned_cols=8  Identities=63%  Similarity=1.111  Sum_probs=3.5

Q ss_pred             CCCCCCCc
Q 022548          104 SLGSGMYG  111 (295)
Q Consensus       104 ~Yg~~~yg  111 (295)
                      +||++.||
T Consensus      1202 GygsGGYG 1209 (1282)
T KOG0921|consen 1202 GYGSGGYG 1209 (1282)
T ss_pred             CcCCCCCC
Confidence            34444443

>PF04088 Peroxin-13_N: Peroxin 13, N-terminal region; InterPro: IPR007223 Peroxin-13 is a component of the peroxisomal translocation machinery with Peroxin-14 and Peroxin-17

Probab=87.13  E-value=1.7  Score=38.48  Aligned_cols=9  Identities=22%  Similarity=0.217  Sum_probs=6.9

Q ss_pred             CCCCCchHH
Q 022548          183 APSSPPGFW  191 (295)
Q Consensus       183 e~ts~p~fw  191 (295)
                      |++++++|.
T Consensus        21 eestr~tFq   29 (158)
T PF04088_consen   21 EESTRATFQ   29 (158)
T ss_pred             HHhhHHHHH
Confidence            778888884

Both termini of Peroxin-13 are oriented to the cytosol. It is required for peroxisomal association of peroxin-14 []. The proteins also contain an SH3 domain (IPR001452 from INTERPRO).; GO: 0016560 protein import into peroxisome matrix, docking, 0005777 peroxisome, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	295
3lvg_A	624	Clathrin heavy chain 1; SELF assembly, coated PIT,	2e-04

>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A Length = 624

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 9/36 (25%), Positives = 12/36 (33%)

Query: 132 MYRGGYGGLYGSSGMYGGGMYNSGFGGPMGGYGMGM 167
           M   G          +G G     +G P  G+G  M
Sbjct: 589 MLTAGPSVAVPPQAPFGYGYTAPAYGQPQPGFGYSM 624

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00