Citrus Sinensis ID: 022651

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
Protein Sequence
MSAIASSQNCSGQSMFRHCKTTARLIRNAKEIAPVTHLPTTPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIERCD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHcccccccccccccccccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccHHcccEEEEEEEccccccccHHHHHHHHHHcccccccccccEEEEEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEccEEccccccccccccccccccccccHHHHHHHcccccEEEEEcccccccccccccccccccccEEEccccEEEccccHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHccEEEEEEEcccccccccHHHHHHHHHcccccccccccEEEEEEEEcccccEEEEEEcccccccccccccccccccccccccHHHHccccccccEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEEccEEEcccccccccccccccEEEccccEEEEcHHHHHHcc
Coil and Loop (DISEMBL)
msaiassqncsgqsmfrHCKTTARLIRNakeiapvthlpttplsavssnVRTNivmnnnvvdphQLEAIFQKKRSLRSKIRKdlknmdpiqrsqedtaVQDIVLESSWFKASRNICAYIScaslrevdtSRIVSEILsnqtdgngqmrkklyvprvedknsnmrMLKISAVKDLVANSmnilepslldsdgnqcedvmqasepvdllilpglafdrsggrlgrgggYYDVFLKKYQKLAQEQKWKQPLLVALLYSLqlvdeesipvtpydvpvdalvsprgfipispvaiercd
Flexible Loop (DISEMBL)
msaiassqncsgqsmfRHCKTTARLIRNAKeiapvthlpttplsavsSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRSKirkdlknmdpiqrsqedtavqDIVLESSWFKASRNICAYISCASLREVDTSRIVSEilsnqtdgngqmrkklyvprvedknsnmRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDAlvsprgfipispvaiercd
Low Complexity Region (SEG)
MSAIASSQNCSGQSMFRHCKTTARLIRNAKEIAPVTHLPTTPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDrsggrlgrgggYYDVFLKKYQKLAQEQKWKQPllvallyslqlVDEESIPVTPYDVPVDALVSPRGFIPISPVAIERCD
Disordered region (IsUnstruct)
***************FRHCKTTARLIRNAKEIAPVTHLPTTPLSAVSSNVRTNIVMNNNVVDPHQLEAIF***************************AVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEIL***************************MLKISAVKDLVANSMNILE*************VMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAI****
Disordered Region (DISOPRED)
*************SMFRHCKTTARLIRNAKEIAPVTH*************************************SLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAI*R**
Disordered Region (DISEMBL)
**************MFRHCKTTARLIRNAKEIAPVTHLPTTPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIERCD
Disordered Region (DISPRO)
*******QNCSGQSMFRHCKTTARLIRNAKEIAPVTHLPTTPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAI*RCD
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSAIASSQNCSGQSMFRHCKTTARLIRNAKEIAPVTHLPTTPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIERCD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	294	2.2.26 [Sep-21-2011]
P49914	203	5-formyltetrahydrofolate	yes	no	0.642	0.931	0.295	9e-18
P80405	201	5-formyltetrahydrofolate	yes	no	0.625	0.915	0.307	1e-17
Q9D110	203	5-formyltetrahydrofolate	yes	no	0.625	0.906	0.283	3e-17
Q9XWE6	206	Probable 5-formyltetrahyd	yes	no	0.653	0.932	0.251	4e-14
P44905	187	Uncharacterized protein H	yes	no	0.615	0.967	0.289	2e-12
Q9P7W2	204	Probable 5-formyltetrahyd	yes	no	0.663	0.955	0.274	2e-12
Q8K9E3	199	Uncharacterized protein B	yes	no	0.622	0.919	0.247	2e-11
P0AC28	182	Uncharacterized protein Y	N/A	no	0.482	0.780	0.301	8e-11
P0AC29	182	Uncharacterized protein Y	N/A	no	0.482	0.780	0.301	8e-11
P40099	211	5-formyltetrahydrofolate	yes	no	0.636	0.886	0.271	2e-10

>sp|P49914|MTHFS_HUMAN 5-formyltetrahydrofolate cyclo-ligase OS=Homo sapiens GN=MTHFS PE=1 SV=2

 Score = 91.3 bits (225), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 116/213 (54%), Gaps = 24/213 (11%)

Query: 68  AIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREV 127
           A+   KRSLR ++++ L+ M   +R ++   +   V+  S ++ S+ I  ++S     E+
Sbjct: 5   AVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQD--EI 62

Query: 128 DTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD---LVANSMNILEP 184
           +T  I+ +I         Q  K  ++PR   ++++M M++I + ++   L   S NI +P
Sbjct: 63  ETEEIIKDIF--------QRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQP 114

Query: 185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKW 244
                +G+  E+ + ++  +DL+ +PGL FD+ G RLGRG GYYD +LK   +  Q Q+ 
Sbjct: 115 G----EGDVREEAL-STGGLDLIFMPGLGFDKHGNRLGRGKGYYDAYLK---RCLQHQEV 166

Query: 245 KQPLLVALLYSLQLVDEESIPVTPYDVPVDALV 277
           K P  +AL +  Q+  +  +PV   D+ VD ++
Sbjct: 167 K-PYTLALAFKEQICLQ--VPVNENDMKVDEVL 196

Contributes to tetrahydrofolate metabolism. Helps regulate carbon flow through the folate-dependent one-carbon metabolic network that supplies carbon for the biosynthesis of purines, thymidine and amino acids.
Homo sapiens (taxid: 9606)
EC: 6EC: .EC: 3EC: .EC: 3EC: .EC: 2

>sp|P80405|MTHFS_RABIT 5-formyltetrahydrofolate cyclo-ligase OS=Oryctolagus cuniculus GN=MTHFS PE=1 SV=1

 Score = 90.5 bits (223), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 24/208 (11%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           KRSLR+++++ L+ +   +R +    +   V+    ++ S+ I  ++S     E++T  I
Sbjct: 10  KRSLRAELKQRLRAISAEERLRCQRLLTQKVIAHRQYQKSQRISIFLSMPD--EIETEEI 67

Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISA---VKDLVANSMNILEPSLLDS 189
           + +I         Q  K  ++PR   ++++M M+K+++   +  L   S NI +PS  D+
Sbjct: 68  IKDIF--------QQGKVCFIPRYRLQSNHMDMVKLASADEISSLPKTSWNIHQPSESDT 119

Query: 190 DGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLL 249
                E+ + A+  +DL+ +PGL FDR+G RLGRG GYYD +L   Q+  Q+Q  K P  
Sbjct: 120 R----EEAL-ATGGLDLIFMPGLGFDRNGNRLGRGRGYYDTYL---QRCLQQQGAK-PYT 170

Query: 250 VALLYSLQLVDEESIPVTPYDVPVDALV 277
           +AL +  Q+  +  +PV   DV VD ++
Sbjct: 171 IALAFREQICPQ--VPVDDTDVSVDEVL 196

Contributes to tetrahydrofolate metabolism. Helps regulate carbon flow through the folate-dependent one-carbon metabolic network that supplies carbon for the biosynthesis of purines, thymidine and amino acids.

Oryctolagus cuniculus (taxid: 9986)

EC: 6

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9D110|MTHFS_MOUSE 5-formyltetrahydrofolate cyclo-ligase OS=Mus musculus GN=Mthfs PE=2 SV=2

 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 116/208 (55%), Gaps = 24/208 (11%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           KR LR+++++ L+ +   +R ++   +   V+  + ++ S+ I  ++S     EV+T  I
Sbjct: 10  KRGLRAELKQRLRALSAEERLRQSLLLTQKVIAHNQYQNSKRISIFLSMQD--EVETEVI 67

Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLV---ANSMNILEPSLLDS 189
           + +I            K  ++PR + ++++M M+++++ +++      S NI +P     
Sbjct: 68  IKDIFKQG--------KICFIPRYQFQSNHMDMVRLTSSEEIALLPKTSWNIHQPG---- 115

Query: 190 DGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLL 249
           +G+  E+ + ++  +DL+ LPGL FD+ G RLGRG GYYD +LK   +  Q Q+ K P  
Sbjct: 116 EGDVREEAL-STGGLDLIFLPGLGFDKDGNRLGRGKGYYDTYLK---RCVQHQEVK-PYT 170

Query: 250 VALLYSLQLVDEESIPVTPYDVPVDALV 277
           +AL +  Q+  +  IPV  +D+ VD ++
Sbjct: 171 MALAFKEQICPQ--IPVDEHDMKVDEVL 196

Contributes to tetrahydrofolate metabolism. Helps regulate carbon flow through the folate-dependent one-carbon metabolic network that supplies carbon for the biosynthesis of purines, thymidine and amino acids.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9XWE6|MTHFS_CAEEL Probable 5-formyltetrahydrofolate cyclo-ligase OS=Caenorhabditis elegans GN=Y106G6E.4 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 23/215 (10%)

Query: 66  LEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLR 125
           + AI + K  LR  ++  L  +   +  ++  AV + ++ES WF+ S+ +  Y+S +   
Sbjct: 1   MSAIKEVKSELRQFMKTLLGKISKEETQRQTEAVFEKIIESKWFQESKRLSVYVSTSG-- 58

Query: 126 EVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKI---SAVKDLVANSMNIL 182
           E+ T  I+ + L        +M K++++P+    ++ M M+++   +A  +L +    I 
Sbjct: 59  EIQTDSIIQKAL--------EMGKEVFIPQFTKGSTAMDMVRVPDQTAFDNLPSTLWGIR 110

Query: 183 EPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQ 242
           +P     +          + P+DL++ PG+AF   G R G G GYYD F   + K   E 
Sbjct: 111 QP-----EPKWKWQSYHETGPLDLILAPGVAFSPYGLRCGHGKGYYDRFFSTHHKHFPEN 165

Query: 243 KWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALV 277
               P  + L    Q++   +IP++  DV +D ++
Sbjct: 166 ---SPKKIGLALREQIIG--TIPISETDVELDEVI 195

Caenorhabditis elegans (taxid: 6239)

EC: 6

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 2

>sp|P44905|Y858_HAEIN Uncharacterized protein HI_0858 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0858 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 30/211 (14%)

Query: 71  QKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTS 130
           QK++ +R++IRK   N+  +Q+ Q + +V    L     + ++NI  Y S     E+ T 
Sbjct: 4   QKRQQIRTEIRKIRANLTALQQHQAEQSVTQHALNLIEQRQAKNIALYFSFDG--EISTK 61

Query: 131 RIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD--LVANSMNILEPSLLD 188
            ++  +            K +Y+P V    +   +L +  + D  +  N   I EP L  
Sbjct: 62  ALIQSLWMQ--------NKNVYLP-VLHPFTKHYLLFLRYLPDTPMKQNQFGIWEPKL-- 110

Query: 189 SDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPL 248
                 ++V+  +E +D+L  P +AFD+ G RLG GGG+YD  L+ +Q        K  +
Sbjct: 111 ----NVQNVLPLNE-LDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQN-------KSFI 158

Query: 249 LVALLYSLQLVDEESIPVTPYDVPV-DALVS 278
            V L Y  Q V  E++P   +DVP+ D LV 
Sbjct: 159 PVGLAYQCQQV--ENLPTEHWDVPLFDILVG 187

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

>sp|Q9P7W2|FTHC_SCHPO Probable 5-formyltetrahydrofolate cyclo-ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1703.08c PE=3 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 20/215 (9%)

Query: 72  KKRSLRSKIRKDLKNM-DPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTS 130
           KK  LR+ +   L  + D I  SQ  +  + +V    W K  +N+C Y++    +EV T 
Sbjct: 4   KKNQLRAILNSSLGKLADHIIDSQSISICKQVVELPEW-KRCKNVCLYMNMPK-KEVRTR 61

Query: 131 RIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKI-SAVKDLVANSMNILEPSLLDS 189
            ++        D   +  K +++P+    +  M M ++    + L  N   I EP+    
Sbjct: 62  CLI--------DVAFKEGKNVFIPKCIGSHV-MEMYQVFEKTESLTINKWGIAEPN---- 108

Query: 190 DGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLL 249
              +   +M      +L+I+PG+AFD    RLG G GYYD ++ KYQ  A +++ +  + 
Sbjct: 109 --GESRKIMDDETDCELIIVPGVAFDEKLSRLGHGKGYYDNYISKYQSWALQKESRANMF 166

Query: 250 -VALLYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
            V +    Q++    IP+   D  +DALV+P   I
Sbjct: 167 KVGICLKEQILPNREIPMDTRDQKLDALVTPEKVI 201

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 6

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 2

>sp|Q8K9E3|Y396_BUCAP Uncharacterized protein BUsg_396 OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=BUsg_396 PE=3 SV=1

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 27/210 (12%)

Query: 71  QKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTS 130
           Q ++ +RS IR    ++   ++  E   +       +    ++NI  ++S     E++T 
Sbjct: 7   QNRKEIRSYIRIVRNSVTLTKKYDESNKIVRTAFNCNIIYNAKNIACFLSFDG--EINTY 64

Query: 131 RIVSEILSNQTDGNGQMRKKLYVPRVEDKNS-NMRMLKISAVKDLVANSMNILEPSLLDS 189
            ++ ++  N         K +++P V    S  +  +  +    L  N  NIL+P     
Sbjct: 65  PLILKLWLNN--------KNVFLPIVSSSYSRKLFFVPFTCKSILYYNQYNILQPFY--- 113

Query: 190 DGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLL 249
                +D++  S+ +DL+I+P +AFD  G RLG GGG+YD FLK +++       K+ + 
Sbjct: 114 ---NMKDIILESD-LDLIIVPLVAFDCRGVRLGMGGGFYDQFLKNWER-------KKFIP 162

Query: 250 VALLYSLQLVDEESIPVTPYDVPVDALVSP 279
           + + Y  Q V+   IP  P+D+ +  +++P
Sbjct: 163 IGMAYDFQFVN--YIPRQPWDISLPIVLTP 190

Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804)

>sp|P0AC28|YGFA_ECOLI Uncharacterized protein YgfA OS=Escherichia coli (strain K12) GN=ygfA PE=1 SV=1

 Score = 67.8 bits (164), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 27/169 (15%)

Query: 112 SRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNS-NMRMLKISA 170
           +  +  ++S     E+DT  ++ ++         +  K++Y+P +   ++ N+  L    
Sbjct: 34  AHTVAVFLSFDG--ELDTQPLIEQLW--------RAGKRVYLPVLHPFSAGNLLFLNYHP 83

Query: 171 VKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDV 230
             +LV N + I EP L         DV+  S  +D+LI P +AFD  G RLG GGG+YD 
Sbjct: 84  QSELVMNRLKIHEPKL------DVRDVLPLSR-LDVLITPLVAFDEYGQRLGMGGGFYDR 136

Query: 231 FLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSP 279
            L+ +Q         QP  V   +  QLV  E +PV  +D+P+ A+V+P
Sbjct: 137 TLQNWQHYK-----TQP--VGYAHDCQLV--EKLPVEEWDIPLPAVVTP 176

Escherichia coli (strain K12) (taxid: 83333)

>sp|P0AC29|YGFA_ECO57 Uncharacterized protein YgfA OS=Escherichia coli O157:H7 GN=ygfA PE=3 SV=1

 Score = 67.8 bits (164), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 27/169 (15%)

Query: 112 SRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNS-NMRMLKISA 170
           +  +  ++S     E+DT  ++ ++         +  K++Y+P +   ++ N+  L    
Sbjct: 34  AHTVAVFLSFDG--ELDTQPLIEQLW--------RAGKRVYLPVLHPFSAGNLLFLNYHP 83

Query: 171 VKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDV 230
             +LV N + I EP L         DV+  S  +D+LI P +AFD  G RLG GGG+YD 
Sbjct: 84  QSELVMNRLKIHEPKL------DVRDVLPLSR-LDVLITPLVAFDEYGQRLGMGGGFYDR 136

Query: 231 FLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSP 279
            L+ +Q         QP  V   +  QLV  E +PV  +D+P+ A+V+P
Sbjct: 137 TLQNWQHYK-----TQP--VGYAHDCQLV--EKLPVEEWDIPLPAVVTP 176

Escherichia coli O157:H7 (taxid: 83334)

>sp|P40099|FTHC_YEAST 5-formyltetrahydrofolate cyclo-ligase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAU1 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 41/228 (17%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           K+ LR +I++ +  +D    + E   +   V        SR +  Y+S     EV T  I
Sbjct: 4   KQLLRRQIKRVINALDYDIIAAESHTISQAVRSLIASANSRRVACYMSMDK-GEVTTGEI 62

Query: 133 VSEILSNQTDGNGQMRKKLYVPRV------------EDKNSNM---RMLKISAVKDLVAN 177
           +  +     DG     +++++PR             ED + ++   RM  +  V+DL   
Sbjct: 63  IKNLFQ---DG-----QEVFLPRCTHTSESKHFKLREDHHPHLIFHRMSSLKMVRDLKPQ 114

Query: 178 S-MNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFD-RSGGRLGRGGGYYDVFLKKY 235
               + EP          E  ++ S+ +D++++PG+AFD ++G R+G G GYYD F ++Y
Sbjct: 115 GPYQLKEP----------EPHIEESDILDVVLVPGVAFDIKTGARMGHGAGYYDDFFQRY 164

Query: 236 QKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
           + L + QK   PLLV L    Q+     IP+  +D  +D +V   G I
Sbjct: 165 KILHEGQK---PLLVGLCLMEQVA--SPIPLEKHDYSMDCIVCGDGSI 207

Utilizes 5-formyltetrahydrofolate (folinic acid) as substrate in an alternative way of folate biosynthesis.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 6

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
359473400	294	PREDICTED: LOW QUALITY PROTEIN: probable	0.925	0.925	0.592	2e-84
255540841	292	5-formyltetrahydrofolate cyclo-ligase, p	0.884	0.890	0.590	1e-83
359491756	273	PREDICTED: 5-formyltetrahydrofolate cycl	0.816	0.879	0.654	8e-83
297734059	242	unnamed protein product [Vitis vinifera]	0.778	0.946	0.682	6e-82
350535903	273	5-formyltetrahydrofolate cycloligase [So	0.840	0.904	0.610	7e-80
224121584	276	5-formyltetrahydrofolate cyclo-ligase [P	0.772	0.822	0.653	7e-77
449477615	337	PREDICTED: 5-formyltetrahydrofolate cycl	0.908	0.792	0.557	3e-75
449441041	337	PREDICTED: 5-formyltetrahydrofolate cycl	0.908	0.792	0.553	1e-74
18416944	277	5-formyltetrahydrofolate cycloligase [Ar	0.928	0.985	0.564	2e-74
217072924	241	unknown [Medicago truncatula]	0.768	0.937	0.621	2e-73

>gi|359473400|ref|XP_003631296.1| PREDICTED: LOW QUALITY PROTEIN: probable 5-formyltetrahydrofolate cyclo-ligase-like [Vitis vinifera]

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 169/285 (59%), Positives = 210/285 (73%), Gaps = 13/285 (4%)

Query: 20  KTTARLIRNAKEIAPVTHLPT--TPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLR 77
           K    LI   + IA  T  P+  +P    SS+   +IV  +  +D  QL+AIFQ+KR LR
Sbjct: 9   KAKGLLISPPRTIALCTSFPSPLSPTVRCSSDSPPSIVTMSRGID-SQLDAIFQQKRILR 67

Query: 78  SKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEIL 137
           SKIR++LKNMD IQRS+ED A+Q IVL + WFK+S+++ AY+SCA+L+EVDTSRI+SE L
Sbjct: 68  SKIRRELKNMDLIQRSKEDDAIQSIVLVAPWFKSSKSLFAYVSCATLQEVDTSRILSECL 127

Query: 138 SNQTD-GNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCED 196
            +    G  ++RKKLYV  +ED+  NMRMLKIS++ DLVA+SMNILEP+ +D DGN+ ED
Sbjct: 128 CSPAKVGYTEVRKKLYVLHLEDRKCNMRMLKISSINDLVASSMNILEPAPVDCDGNERED 187

Query: 197 VMQASEPVDLLI---------LPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQP 247
            +QAS PVDL I         LPGLAFDRSG RLG  GGYYDVFLK YQ+L +E KWKQP
Sbjct: 188 ALQASNPVDLFIIPDNFSSVCLPGLAFDRSGRRLGHIGGYYDVFLKXYQELTKEWKWKQP 247

Query: 248 LLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIER 292
           LLVAL YSLQ+V E +I +TP D+PVDALVSP GFIPISP A+ER
Sbjct: 248 LLVALSYSLQVVGEGAIAITPIDIPVDALVSPSGFIPISPAALER 292

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540841|ref|XP_002511485.1| 5-formyltetrahydrofolate cyclo-ligase, putative [Ricinus communis] gi|223550600|gb|EEF52087.1| 5-formyltetrahydrofolate cyclo-ligase, putative [Ricinus communis]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 157/266 (59%), Positives = 201/266 (75%), Gaps = 6/266 (2%)

Query: 26  IRNAKEIAPVTHLPTT-PLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRSKIRKDL 84
           ++ A  I P+T  PTT P S +      +I  +         + IF++KR LRSK+RK L
Sbjct: 10  VKAAFMIWPLTFSPTTLPPSLLRPTATMSIAQHQTA----NFDEIFKQKRILRSKVRKSL 65

Query: 85  KNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSN-QTDG 143
           K+MDP  RS+ED A+Q +VLE+ WFK+S+  CAYISC++LREV+TS ++ EIL N + DG
Sbjct: 66  KSMDPSLRSEEDNAIQSLVLEAPWFKSSKTFCAYISCSALREVNTSVLLREILKNPEKDG 125

Query: 144 NGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEP 203
             Q  KKLYVPRVEDKNS+MRML IS++ DL+ANSMNILEP+ +D  GN+ EDV+QA++P
Sbjct: 126 CAQTPKKLYVPRVEDKNSHMRMLNISSMDDLIANSMNILEPAPIDGLGNKREDVLQANDP 185

Query: 204 VDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEES 263
           VDL +LPGLAF+R+G RLGRGGGYYD FL+KYQ+LA+E+ WKQPL V L YSLQ++DE  
Sbjct: 186 VDLFLLPGLAFERTGKRLGRGGGYYDTFLRKYQELARERNWKQPLFVGLSYSLQIMDEGV 245

Query: 264 IPVTPYDVPVDALVSPRGFIPISPVA 289
           IPVT +DV VDALV+P G IPISP A
Sbjct: 246 IPVTSHDVLVDALVTPSGMIPISPSA 271

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491756|ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase [Vitis vinifera]

 Score =  313 bits (801), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 163/249 (65%), Positives = 200/249 (80%), Gaps = 9/249 (3%)

Query: 51  RTNIVMNNNVVDPHQ-----LEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLE 105
           R+ + M NN    HQ     LEA+F++K+ LRS +RK LK MDP  RSQED AVQ+I+LE
Sbjct: 27  RSIVTMTNNT---HQSSNTHLEAVFKQKKILRSSVRKALKGMDPSSRSQEDNAVQNIILE 83

Query: 106 SSWFKASRNICAYISCASLREVDTSRIVSEILSNQT-DGNGQMRKKLYVPRVEDKNSNMR 164
           + WF++S+ +CAYISC+SLREVDTS+++SEIL N   DG+ QM KKLYVPRVEDKNS MR
Sbjct: 84  APWFRSSQRLCAYISCSSLREVDTSKVLSEILQNPAKDGHTQMGKKLYVPRVEDKNSYMR 143

Query: 165 MLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRG 224
           ML I+ + DL++NSMNILEP+ +D DGN+ EDVMQA++PVDLL+LPGLAFD+SG RLGRG
Sbjct: 144 MLNITHMDDLISNSMNILEPAPVDGDGNEREDVMQATDPVDLLLLPGLAFDKSGRRLGRG 203

Query: 225 GGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIP 284
           GGYYD FLK Y +L +E+ WKQPLLVAL YS+Q++DE  IPVTP DVPVDALVSP G IP
Sbjct: 204 GGYYDAFLKNYLELVKERNWKQPLLVALSYSVQIMDEGVIPVTPNDVPVDALVSPAGVIP 263

Query: 285 ISPVAIERC 293
           I+  A ERC
Sbjct: 264 ITTAAQERC 272

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734059|emb|CBI15306.3| unnamed protein product [Vitis vinifera]

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 157/230 (68%), Positives = 192/230 (83%), Gaps = 1/230 (0%)

Query: 65  QLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASL 124
            LEA+F++K+ LRS +RK LK MDP  RSQED AVQ+I+LE+ WF++S+ +CAYISC+SL
Sbjct: 12  HLEAVFKQKKILRSSVRKALKGMDPSSRSQEDNAVQNIILEAPWFRSSQRLCAYISCSSL 71

Query: 125 REVDTSRIVSEILSNQT-DGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILE 183
           REVDTS+++SEIL N   DG+ QM KKLYVPRVEDKNS MRML I+ + DL++NSMNILE
Sbjct: 72  REVDTSKVLSEILQNPAKDGHTQMGKKLYVPRVEDKNSYMRMLNITHMDDLISNSMNILE 131

Query: 184 PSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQK 243
           P+ +D DGN+ EDVMQA++PVDLL+LPGLAFD+SG RLGRGGGYYD FLK Y +L +E+ 
Sbjct: 132 PAPVDGDGNEREDVMQATDPVDLLLLPGLAFDKSGRRLGRGGGYYDAFLKNYLELVKERN 191

Query: 244 WKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIERC 293
           WKQPLLVAL YS+Q++DE  IPVTP DVPVDALVSP G IPI+  A ERC
Sbjct: 192 WKQPLLVALSYSVQIMDEGVIPVTPNDVPVDALVSPAGVIPITTAAQERC 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350535903|ref|NP_001234731.1| 5-formyltetrahydrofolate cycloligase [Solanum lycopersicum] gi|22087556|gb|AAM90961.1|AF516366_1 5-formyltetrahydrofolate cycloligase [Solanum lycopersicum]

 Score =  303 bits (775), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 155/254 (61%), Positives = 203/254 (79%), Gaps = 7/254 (2%)

Query: 40  TTPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAV 99
           T+P SA ++    +     N  D   L+ IF++K++LR  +++DLK+MDP  RS+ED A+
Sbjct: 26  TSPCSATAT---MSTAGEQNTSDTAHLDTIFKQKKALRLVVKRDLKSMDPTLRSEEDEAI 82

Query: 100 QDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDK 159
           Q IV+E+ WFKA + +CAYISC++LREVDTSRI+S ILS+ +    +MRKKL+VPRVED+
Sbjct: 83  QRIVMEAPWFKACKGLCAYISCSALREVDTSRILSHILSSHS----EMRKKLFVPRVEDR 138

Query: 160 NSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGG 219
           N NMRML IS+ +DL+ANSMNILEP+ LD++GN+ EDV+ A+EPVDLLILPGLAFD++G 
Sbjct: 139 NRNMRMLNISSTEDLIANSMNILEPAPLDAEGNEREDVLFANEPVDLLILPGLAFDKAGR 198

Query: 220 RLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSP 279
           RLGRGGGYYD FL +YQ+LA+++ WKQPL VAL YS+Q+VDE +IP+TP DV VDALVSP
Sbjct: 199 RLGRGGGYYDTFLSRYQELAEKRNWKQPLKVALSYSVQIVDEGTIPLTPNDVLVDALVSP 258

Query: 280 RGFIPISPVAIERC 293
            G IPISP A+E C
Sbjct: 259 SGVIPISPAALEFC 272

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121584|ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Populus trichocarpa] gi|222859293|gb|EEE96840.1| 5-formyltetrahydrofolate cyclo-ligase [Populus trichocarpa]

 Score =  293 bits (749), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 149/228 (65%), Positives = 192/228 (84%), Gaps = 1/228 (0%)

Query: 66  LEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLR 125
           L+ IF++K+ LRSK+RK LK+MDP  RSQED A+Q +VLE+ WFK+S+ +CAYI+C++LR
Sbjct: 46  LDGIFKQKQVLRSKVRKSLKSMDPSLRSQEDDAIQSLVLEAPWFKSSQRLCAYITCSALR 105

Query: 126 EVDTSRIVSEILSNQT-DGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEP 184
           EVDTS+++S+IL N T DG+ +  KKLYVPRVEDKNS+MRML IS++ DL+ANSM+ILEP
Sbjct: 106 EVDTSKLLSQILQNPTKDGSVENAKKLYVPRVEDKNSHMRMLNISSMDDLIANSMDILEP 165

Query: 185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKW 244
           + +D  GN  EDVMQA++PVDL +LPGLAFD+SG RLGRGGGYYD FL+KYQ+LA+E+ W
Sbjct: 166 APVDQHGNAREDVMQANDPVDLFLLPGLAFDKSGRRLGRGGGYYDTFLRKYQELAEERDW 225

Query: 245 KQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIER 292
           +QPLLVAL YSLQ++D+ +IPVT  D+PVD LVSP G IPIS  A+ R
Sbjct: 226 RQPLLVALSYSLQIIDDGAIPVTLNDLPVDVLVSPAGVIPISQAALNR 273

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449477615|ref|XP_004155072.1| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase-like [Cucumis sativus]

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 161/289 (55%), Positives = 207/289 (71%), Gaps = 22/289 (7%)

Query: 21  TTARLIRNAKEIAPVT------HLPTT-------PLSAVSSNVRTNIVMNNNVVDPH--- 64
           + A ++RN K + P+       H+ ++       PLS  SS      +  N  + P    
Sbjct: 51  SEAPMLRNYKPLLPIAANSLFNHIQSSAFQQSLPPLSRFSSGYPK--MATNESIKPENED 108

Query: 65  QLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASL 124
           QL+ IF +KR LRS +RK LK MDP  RSQED  +Q IVLE+ WFK+S+ +CAY+SC++L
Sbjct: 109 QLKHIFDQKRVLRSSVRKALKAMDPSFRSQEDNVIQSIVLEAPWFKSSQRLCAYVSCSAL 168

Query: 125 REVDTSRIVSEILSNQ-TDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILE 183
           REVDTSR++SEIL +   DG+    KK+YVPRVEDKNS+MRM  IS + DL+ANSMNILE
Sbjct: 169 REVDTSRLLSEILQHPPKDGHS---KKIYVPRVEDKNSHMRMFNISRMDDLIANSMNILE 225

Query: 184 PSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQK 243
           P+ +D DGN+ EDVMQ  +P+DL +LPGLAFD+SG RLGRGGGYYD FLKKYQ+LA+ + 
Sbjct: 226 PAPVDGDGNEREDVMQTKDPIDLFLLPGLAFDKSGRRLGRGGGYYDTFLKKYQELAKARN 285

Query: 244 WKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIER 292
           WKQPLLVAL YS+Q++DE  IP+TP DV VDALVSP G IPIS   +++
Sbjct: 286 WKQPLLVALSYSVQIMDEGIIPLTPNDVLVDALVSPSGVIPISSAGLDK 334

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441041|ref|XP_004138292.1| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase-like [Cucumis sativus]

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 160/289 (55%), Positives = 206/289 (71%), Gaps = 22/289 (7%)

Query: 21  TTARLIRNAKEIAPVT------HLPTT-------PLSAVSSNVRTNIVMNNNVVDPH--- 64
           + A ++RN K + P+       H+ ++       PLS  SS      +  N  + P    
Sbjct: 51  SEAPMLRNYKPLLPIAANSLFNHIQSSAFQQSLPPLSRFSSGYPK--MATNESIKPENED 108

Query: 65  QLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASL 124
           QL+ IF +KR LRS +RK LK MDP  RSQED  +Q IVLE+ WFK+S+ +CAY+SC++L
Sbjct: 109 QLKHIFDQKRVLRSSVRKALKAMDPSFRSQEDNVIQSIVLEAPWFKSSQRLCAYVSCSAL 168

Query: 125 REVDTSRIVSEILSNQ-TDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILE 183
           REVDTSR++SEIL +   DG+    KK+YVPRVEDKNS+MRM  IS + DL+ANSMNILE
Sbjct: 169 REVDTSRLLSEILQHPPKDGHS---KKIYVPRVEDKNSHMRMFNISRMDDLIANSMNILE 225

Query: 184 PSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQK 243
           P+ +D DGN+ EDVMQ  +P+DL +LPGLAFD+SG RLGRGGGYYD FLK YQ+LA+ + 
Sbjct: 226 PAPVDGDGNEREDVMQTKDPIDLFLLPGLAFDKSGRRLGRGGGYYDTFLKNYQELAKARN 285

Query: 244 WKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIER 292
           WKQPLLVAL YS+Q++DE  IP+TP DV VDALVSP G IPIS   +++
Sbjct: 286 WKQPLLVALSYSVQIMDEGIIPLTPNDVLVDALVSPSGVIPISSAGLDK 334

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416944|ref|NP_568284.1| 5-formyltetrahydrofolate cycloligase [Arabidopsis thaliana] gi|22087553|gb|AAM90960.1|AF516365_1 5-formyltetrahydrofolate cycloligase [Arabidopsis thaliana] gi|21536640|gb|AAM60972.1| 5-formyltetrahydrofolate cyclo-ligase-like protein [Arabidopsis thaliana] gi|87116638|gb|ABD19683.1| At5g13050 [Arabidopsis thaliana] gi|332004461|gb|AED91844.1| 5-formyltetrahydrofolate cycloligase [Arabidopsis thaliana]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/280 (56%), Positives = 202/280 (72%), Gaps = 7/280 (2%)

Query: 12  GQSMFRHCKTTARLIRNAKEIAPVTHLPTTPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQ 71
           G  +F  C TT  L R+     P   +PT P+  +S   R  + M+    +  +L++IF+
Sbjct: 3   GARVF--CITTTALRRSPIFFFP--KIPTRPVFRLSPATRPIVAMSTTSKNQEELDSIFK 58

Query: 72  KKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSR 131
           +KR +RS +RK LK MDP  R+Q+D A+Q  VLE+ WFK+ + +CAYISC SL EVDTS+
Sbjct: 59  QKRVVRSTVRKSLKAMDPSLRTQQDEAIQKTVLEAPWFKSCKGLCAYISCKSLNEVDTSK 118

Query: 132 IVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDG 191
           I+SEIL    D N Q  KKLYVP VEDKNSNMRML IS ++DLVANSMNILEP+ +D+ G
Sbjct: 119 ILSEIL-QHPDSNTQ--KKLYVPWVEDKNSNMRMLHISHMEDLVANSMNILEPAPVDAQG 175

Query: 192 NQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVA 251
           N  EDV+QA EP+DL ILPGLAFDR G RLGRGGGYYD FLK+YQ  A+E+ W+ PL+VA
Sbjct: 176 NDREDVLQADEPIDLFILPGLAFDRCGRRLGRGGGYYDTFLKRYQDRAKEKGWRYPLMVA 235

Query: 252 LLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIE 291
           L YS Q++++ SIPVTP DV +DALV+P G +PI+P A E
Sbjct: 236 LSYSPQILEDGSIPVTPNDVLIDALVTPSGVVPITPRATE 275

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072924|gb|ACJ84822.1| unknown [Medicago truncatula]

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 143/230 (62%), Positives = 187/230 (81%), Gaps = 4/230 (1%)

Query: 65  QLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASL 124
           +L+AIF++K++LR+++RK LK +DP  RSQ+D A+QDI++ + WFK+SR +CAYISC++L
Sbjct: 15  ELDAIFKQKKALRTQVRKTLKAIDPSLRSQQDKAIQDIIVGAPWFKSSRGLCAYISCSAL 74

Query: 125 REVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEP 184
           REVDTS+++S IL     G+    KKLYVPRVEDKNS+MRML IS + DLVANSMNILEP
Sbjct: 75  REVDTSKLLSHILQPPPAGD----KKLYVPRVEDKNSHMRMLNISRIDDLVANSMNILEP 130

Query: 185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKW 244
           + +D+DGN  +DV+QA++PVD+++LPGLAFD+SG RLGRGGGYYD FLK Y+ LA+ + W
Sbjct: 131 TPVDADGNARQDVLQANDPVDIMLLPGLAFDKSGRRLGRGGGYYDTFLKNYRDLAETRNW 190

Query: 245 KQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVAIERCD 294
            QPLLVAL YS Q++D+  IPVT  D+PVDALVSP G IPIS  A +R D
Sbjct: 191 TQPLLVALSYSQQILDDGVIPVTSTDIPVDALVSPEGVIPISSAAFDRMD 240

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
TAIR|locus:2179827	277	5-FCL "5-formyltetrahydrofolat	0.911	0.967	0.512	9.4e-66
UNIPROTKB|F1NWN8	201	MTHFS "Uncharacterized protein	0.646	0.945	0.276	5.4e-15
FB|FBgn0085453	201	CG34424 [Drosophila melanogast	0.636	0.930	0.263	1.8e-14
UNIPROTKB|P49914	203	MTHFS "5-formyltetrahydrofolat	0.642	0.931	0.248	1.8e-11
RGD|1306876	203	Mthfs "5,10-methenyltetrahydro	0.625	0.906	0.254	2.3e-11
UNIPROTKB|P80405	201	MTHFS "5-formyltetrahydrofolat	0.642	0.940	0.258	3.9e-11
UNIPROTKB|E2RR20	203	MTHFS "Uncharacterized protein	0.517	0.748	0.247	6.7e-11
MGI|MGI:1340032	203	Mthfs "5, 10-methenyltetrahydr	0.625	0.906	0.240	1.9e-10
POMBASE|SPBC1703.08c	204	SPBC1703.08c "5-formyltetrahyd	0.663	0.955	0.251	9.8e-10
UNIPROTKB|Q1RMT3	201	MTHFS "5,10-methenyltetrahydro	0.642	0.940	0.225	4.6e-09

TAIR|locus:2179827 5-FCL "5-formyltetrahydrofolate cycloligase" [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 140/273 (51%), Positives = 182/273 (66%)

Query:    19 CKTTARLIRNAKEIAPVTHLPTTPLSAVSSNVRTNIVMNNNVVDPHQLEAIFQKKRSLRS 78
             C TT  L R+     P   +PT P+  +S   R  + M+    +  +L++IF++KR +RS
Sbjct:     8 CITTTALRRSPIFFFP--KIPTRPVFRLSPATRPIVAMSTTSKNQEELDSIFKQKRVVRS 65

Query:    79 KIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILS 138
              +RK LK MDP  R+Q+D A+Q  VLE+ WFK+ + +CAYISC SL EVDTS+I+SEIL 
Sbjct:    66 TVRKSLKAMDPSLRTQQDEAIQKTVLEAPWFKSCKGLCAYISCKSLNEVDTSKILSEILQ 125

Query:   139 NQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVM 198
             +  D N Q  KKLYVP VEDKNSNMRML IS ++DLVANSMNILEP+ +D+ GN  EDV+
Sbjct:   126 HP-DSNTQ--KKLYVPWVEDKNSNMRMLHISHMEDLVANSMNILEPAPVDAQGNDREDVL 182

Query:   199 QASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKWKQPXXXXXXXXXXX 258
             QA EP+DL ILPGLAFD           YYD FLK+YQ  A+E+ W+ P           
Sbjct:   183 QADEPIDLFILPGLAFDRCGRRLGRGGGYYDTFLKRYQDRAKEKGWRYPLMVALSYSPQI 242

Query:   259 VDEESIPVTPYDVPVDALVSPRGFIPISPVAIE 291
             +++ SIPVTP DV +DALV+P G +PI+P A E
Sbjct:   243 LEDGSIPVTPNDVLIDALVTPSGVVPITPRATE 275

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA;IGI;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0046653 "tetrahydrofolate metabolic process" evidence=IMP

UNIPROTKB|F1NWN8 MTHFS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 59/213 (27%), Positives = 104/213 (48%)

Query:    68 AIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREV 127
             A+   KR+LR+++R+ L+ +   ++ ++   +   V+  S ++ S+ I  ++S     E+
Sbjct:     5 ALGAAKRALRTELRQKLRALGAAEKQRQSRLLSRKVIGHSKYQESKRIAIFLSMPD--EI 62

Query:   128 DTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD---LVANSMNILEP 184
              T  I+ +I      G     K+ ++PR +  +++M MLK+S+ +D   L   S NIL+P
Sbjct:    63 QTEEIIKDIFKQ---G-----KECFIPRYKPHSNHMDMLKLSSAEDISSLTLTSWNILQP 114

Query:   185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKW 244
             S  D D  + E+ + A   +DL+ +PGL FD           YYD +L +  K    +  
Sbjct:   115 S--DDDSAR-EEAL-AGGGLDLIFMPGLGFDKKGNRLGRGKGYYDTYLGRCMKHPSGK-- 168

Query:   245 KQPXXXXXXXXXXXVDEESIPVTPYDVPVDALV 277
               P              ES+PVT  DV VD ++
Sbjct:   169 --PYTIALAFREQIC--ESVPVTENDVQVDEIL 197

GO:0005524 "ATP binding" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

FB|FBgn0085453 CG34424 [Drosophila melanogaster (taxid:7227)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 55/209 (26%), Positives = 104/209 (49%)

Query:    73 KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
             K +LR +++  LK +D    +++  AV   VL+S  F+ ++ +  Y+S AS  E+DT+ +
Sbjct:    10 KVALRKRMKDALKGIDAEAIARQSQAVTAKVLQSEIFRQAQRVSIYLSTAS--ELDTTAL 67

Query:   133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD---LVANSMNILEPSLLDS 189
             +SE+         ++ K ++VP  E   S M+M+++  +++   L     NI +P   ++
Sbjct:    68 LSEMF--------RLEKMVFVPTYE--GSRMKMVRLRGMEEYESLPLTKWNIKQPDFKEA 117

Query:   190 DGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKWKQPXX 249
                  ED M     +DL I+PG+AF            YYD FLK++   A++   K+   
Sbjct:   118 R----EDAMTNGHGIDLFIVPGVAFTRCGARMGHGMGYYDKFLKQH---AEKYPHKKISL 170

Query:   250 XXXXXXXXXVDEESIPVTPYDVPVDALVS 278
                      V  E +P+  +DV + ++++
Sbjct:   171 MALSLNEQIVSNEELPMESHDVRLHSVIT 199

GO:0005524 "ATP binding" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005829 "cytosol" evidence=ISS

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=ISS

UNIPROTKB|P49914 MTHFS "5-formyltetrahydrofolate cyclo-ligase" [Homo sapiens (taxid:9606)]

 Score = 159 (61.0 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 53/213 (24%), Positives = 100/213 (46%)

Query:    68 AIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREV 127
             A+   KRSLR ++++ L+ M   +R ++   +   V+  S ++ S+ I  ++S     E+
Sbjct:     5 AVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQD--EI 62

Query:   128 DTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD---LVANSMNILEP 184
             +T  I+ +I         Q  K  ++PR   ++++M M++I + ++   L   S NI +P
Sbjct:    63 ETEEIIKDIF--------QRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQP 114

Query:   185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKW 244
                  +G+  E+ +     +DL+ +PGL FD           YYD +LK+     Q Q+ 
Sbjct:   115 G----EGDVREEALSTGG-LDLIFMPGLGFDKHGNRLGRGKGYYDAYLKR---CLQHQEV 166

Query:   245 KQPXXXXXXXXXXXVDEESIPVTPYDVPVDALV 277
             K P             +  +PV   D+ VD ++
Sbjct:   167 K-PYTLALAFKEQICLQ--VPVNENDMKVDEVL 196

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

GO:0015942 "formate metabolic process" evidence=NAS

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IDA;NAS

GO:0005829 "cytosol" evidence=NAS

GO:0046653 "tetrahydrofolate metabolic process" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

RGD|1306876 Mthfs "5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)" [Rattus norvegicus (taxid:10116)]

 Score = 158 (60.7 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 53/208 (25%), Positives = 100/208 (48%)

Query:    73 KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
             KR LR+++++ L+ +   +R ++   +   V+  S ++ S+ I  ++S     E++T  I
Sbjct:    10 KRGLRAELKQRLRALGAEERLRQSHLLTQKVIAHSQYQNSKRISIFLSMQD--EIETEEI 67

Query:   133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD---LVANSMNILEPSLLDS 189
             + +I      G     K  ++PR +  +++M M++++A ++   L   S NI +P     
Sbjct:    68 IKDIFKQ---G-----KICFIPRYQFHSNHMDMVRLTAPEEVALLPKTSWNIHQPG---- 115

Query:   190 DGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKWKQPXX 249
             +G+  E+ +     +DL+ LPGL FD           YYD +LK+     Q QK K P  
Sbjct:   116 EGDVREEALSTGG-LDLIFLPGLGFDKDGNRLGRGKGYYDTYLKR---CVQHQKVK-PYT 170

Query:   250 XXXXXXXXXVDEESIPVTPYDVPVDALV 277
                        +  IPV  +D+ VD ++
Sbjct:   171 LALAFREQICPQ--IPVDEHDMKVDEVL 196

GO:0003674 "molecular_function" evidence=ND

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA;ISO

GO:0046653 "tetrahydrofolate metabolic process" evidence=ISO

UNIPROTKB|P80405 MTHFS "5-formyltetrahydrofolate cyclo-ligase" [Oryctolagus cuniculus (taxid:9986)]

 Score = 156 (60.0 bits), Expect = 3.9e-11, P = 3.9e-11
 Identities = 55/213 (25%), Positives = 102/213 (47%)

Query:    68 AIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREV 127
             A+   KRSLR+++++ L+ +   +R +    +   V+    ++ S+ I  ++S     E+
Sbjct:     5 AVSGAKRSLRAELKQRLRAISAEERLRCQRLLTQKVIAHRQYQKSQRISIFLSMPD--EI 62

Query:   128 DTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISA---VKDLVANSMNILEP 184
             +T  I+ +I         Q  K  ++PR   ++++M M+K+++   +  L   S NI +P
Sbjct:    63 ETEEIIKDIF--------QQGKVCFIPRYRLQSNHMDMVKLASADEISSLPKTSWNIHQP 114

Query:   185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKW 244
             S  +SD    E+ + A+  +DL+ +PGL FD           YYD +L   Q+  Q+Q  
Sbjct:   115 S--ESDTR--EEAL-ATGGLDLIFMPGLGFDRNGNRLGRGRGYYDTYL---QRCLQQQGA 166

Query:   245 KQPXXXXXXXXXXXVDEESIPVTPYDVPVDALV 277
             K P             +  +PV   DV VD ++
Sbjct:   167 K-PYTIALAFREQICPQ--VPVDDTDVSVDEVL 196

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=ISS

GO:0046653 "tetrahydrofolate metabolic process" evidence=ISS

UNIPROTKB|E2RR20 MTHFS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 154 (59.3 bits), Expect = 6.7e-11, P = 6.7e-11
 Identities = 42/170 (24%), Positives = 85/170 (50%)

Query:    68 AIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREV 127
             A+   KRSLR+++++ L+ M   +R ++   +   V+  S ++ S+ I  ++S     E+
Sbjct:     6 AVSSAKRSLRAELKQRLRAMSAEERLRQSRLLAQKVIAHSQYQKSKRISIFLSMHD--EI 63

Query:   128 DTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISA---VKDLVANSMNILEP 184
             +T  I+ +I         Q  K  ++PR + ++++M M+K+++   +  L   S NI +P
Sbjct:    64 ETEEIIRDIF--------QQGKTCFIPRYQFRSNHMDMVKLASPEEISSLPKTSWNIHQP 115

Query:   185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKK 234
                  +    E+ +     +DL+ +PGL FD           YYD +L++
Sbjct:   116 G----EDEVREEALSTGG-LDLIFMPGLGFDKHGNRLGRGRGYYDAYLRR 160

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1340032 Mthfs "5, 10-methenyltetrahydrofolate synthetase" [Mus musculus (taxid:10090)]

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 50/208 (24%), Positives = 101/208 (48%)

Query:    73 KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
             KR LR+++++ L+ +   +R ++   +   V+  + ++ S+ I  ++S     EV+T  I
Sbjct:    10 KRGLRAELKQRLRALSAEERLRQSLLLTQKVIAHNQYQNSKRISIFLSMQD--EVETEVI 67

Query:   133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVA---NSMNILEPSLLDS 189
             + +I      G     K  ++PR + ++++M M+++++ +++      S NI +P     
Sbjct:    68 IKDIFKQ---G-----KICFIPRYQFQSNHMDMVRLTSSEEIALLPKTSWNIHQPG---- 115

Query:   190 DGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKWKQPXX 249
             +G+  E+ +     +DL+ LPGL FD           YYD +LK+     Q Q+ K P  
Sbjct:   116 EGDVREEALSTGG-LDLIFLPGLGFDKDGNRLGRGKGYYDTYLKR---CVQHQEVK-PYT 170

Query:   250 XXXXXXXXXVDEESIPVTPYDVPVDALV 277
                        +  IPV  +D+ VD ++
Sbjct:   171 MALAFKEQICPQ--IPVDEHDMKVDEVL 196

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005542 "folic acid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=ISO

GO:0046653 "tetrahydrofolate metabolic process" evidence=ISO

POMBASE|SPBC1703.08c SPBC1703.08c "5-formyltetrahydrofolate cyclo-ligase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 148 (57.2 bits), Expect = 9.8e-10, P = 9.8e-10
 Identities = 54/215 (25%), Positives = 90/215 (41%)

Query:    72 KKRSLRSKIRKDL-KNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTS 130
             KK  LR+ +   L K  D I  SQ  +  + +V    W K  +N+C Y++    +EV T 
Sbjct:     4 KKNQLRAILNSSLGKLADHIIDSQSISICKQVVELPEW-KRCKNVCLYMNMPK-KEVRTR 61

Query:   131 RIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKI-SAVKDLVANSMNILEPSLLDS 189
              ++        +G     K +++P+    +  M M ++    + L  N   I EP+    
Sbjct:    62 CLIDVAFK---EG-----KNVFIPKCIGSHV-MEMYQVFEKTESLTINKWGIAEPN---- 108

Query:   190 DGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLA-QEQKWKQPX 248
                +   +M      +L+I+PG+AFD           YYD ++ KYQ  A Q++      
Sbjct:   109 --GESRKIMDDETDCELIIVPGVAFDEKLSRLGHGKGYYDNYISKYQSWALQKESRANMF 166

Query:   249 XXXXXXXXXXVDEESIPVTPYDVPVDALVSPRGFI 283
                       +    IP+   D  +DALV+P   I
Sbjct:   167 KVGICLKEQILPNREIPMDTRDQKLDALVTPEKVI 201

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISS;IDA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=ISS

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=ISS

UNIPROTKB|Q1RMT3 MTHFS "5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)" [Bos taurus (taxid:9913)]

 Score = 144 (55.7 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 48/213 (22%), Positives = 99/213 (46%)

Query:    68 AIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREV 127
             A+   KRSLR+++++ L+ +   +R ++   +   V   + ++ S+ +  ++S     E+
Sbjct:     6 AVSGAKRSLRAELKQRLRALSAEERLRQSHLLAQKVFTHNEYQKSKRVSIFLSMPD--EI 63

Query:   128 DTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVA---NSMNILEP 184
             +T  I+ +I         +  K  ++PR + ++++M M+K+++ +++      S NI +P
Sbjct:    64 ETEEIIKDIF--------RQGKTCFIPRYQLQSNHMDMVKLASPEEIALLPRTSWNIQQP 115

Query:   185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKW 244
                  +    E+ +     +DL+ +PGL FD           YYD +LK+     Q Q  
Sbjct:   116 G----EDEVLEEALSTGG-LDLIFVPGLGFDKQSNRLGRGKGYYDAYLKR---CLQSQDV 167

Query:   245 KQPXXXXXXXXXXXVDEESIPVTPYDVPVDALV 277
             K P             +  +PV   DV VD ++
Sbjct:   168 K-PYTLALAFKEQICLQ--VPVNENDVKVDEVL 197

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.3.3	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00000050001	SubName- Full=Chromosome chr17 scaffold_101, whole genome shotgun sequence; (287 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00011727001	SubName- Full=Chromosome undetermined scaffold_332, whole genome shotgun sequence; (300 aa)						•	•		0.925
	GSVIVG00031739001	SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (351 aa)						•			0.800
	GSVIVG00024726001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (594 aa)						•	•		0.473
	GSVIVG00012972001	SubName- Full=Chromosome undetermined scaffold_419, whole genome shotgun sequence; (221 aa)							•		0.406

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	294
PLN02812	211	PLN02812, PLN02812, 5-formyltetrahydrofolate cyclo	1e-112
TIGR02727	179	TIGR02727, MTHFS_bact, 5,10-methenyltetrahydrofola	5e-39
pfam01812	182	pfam01812, 5-FTHF_cyc-lig, 5-formyltetrahydrofolat	1e-36
COG0212	191	COG0212, COG0212, 5-formyltetrahydrofolate cyclo-l	1e-35
PRK10333	182	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo	3e-14

>gnl|CDD|178408 PLN02812, PLN02812, 5-formyltetrahydrofolate cyclo-ligase

 Score =  321 bits (826), Expect = e-112
 Identities = 139/218 (63%), Positives = 173/218 (79%), Gaps = 8/218 (3%)

Query: 67  EAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLRE 126
           + I ++K++LR ++R+ LK + P QR+QED A+Q  +LE  WFK+S+ +CAY+SCA LRE
Sbjct: 1   DEIREQKKALRKEVRRALKALSPEQRAQEDAAIQSRLLELPWFKSSKRLCAYVSCAKLRE 60

Query: 127 VDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAV-KDLVANSMNILEPS 185
           VDTS+I+SEIL N         K+LYVPRVEDKNSNMRML I+ +  DLVANSMNILEP+
Sbjct: 61  VDTSKILSEILQNP-------DKRLYVPRVEDKNSNMRMLHITDMADDLVANSMNILEPT 113

Query: 186 LLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWK 245
            +D+DGN  EDV+QA EP+DLL+LPGLAFDRSG RLGRGGGYYD FL KYQ+LA+E+ WK
Sbjct: 114 PVDADGNPREDVLQAPEPLDLLLLPGLAFDRSGRRLGRGGGYYDTFLSKYQELAKEKGWK 173

Query: 246 QPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
           QPLLVAL YS Q++DE S+PV   DV VDALV+P G I
Sbjct: 174 QPLLVALSYSPQILDEGSVPVDETDVLVDALVTPSGVI 211

Length = 211

>gnl|CDD|233985 TIGR02727, MTHFS_bact, 5,10-methenyltetrahydrofolate synthetase

 Score =  134 bits (340), Expect = 5e-39
 Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 32/209 (15%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLR-EVDTSR 131
           K+ LR K+ +  K +   +R    +A+   +L    +K ++ I  Y+    LR EVDT  
Sbjct: 1   KKELRKKLLEARKALSSAERKAASSAIAKRLLALIEWKNAKTIALYLP---LRGEVDTRP 57

Query: 132 IVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKI-SAVKDLVANSMNILEPSLLDSD 190
           ++ ++L           K++ +P+V+     M   +I S  + L      ILEP      
Sbjct: 58  LIEQLLKEG--------KRVALPKVDGDGKEMLFFRIWSPEQPLTKGPFGILEP-----V 104

Query: 191 GNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLV 250
           G+  E V    + +DL+I+PG+AFDR G RLG GGGYYD FL + + +           +
Sbjct: 105 GDLEEPV--PPDEIDLIIVPGVAFDRRGYRLGYGGGYYDRFLARLKGIT----------I 152

Query: 251 ALLYSLQLVDEESIPVTPYDVPVDALVSP 279
            L +  QLVDE  +P  P+DVPVDA+++ 
Sbjct: 153 GLAFDFQLVDE--LPREPHDVPVDAIITE 179

This enzyme, 5,10-methenyltetrahydrofolate synthetase, is also called 5-formyltetrahydrofolate cycloligase. Function of bacterial proteins in this family was inferred originally from the known activity of eukaryotic homologs. Recently, activity was shown explicitly for the member from Mycoplasma pneumonia. Members of this family from alpha- and gamma-proteobacteria, designated ygfA, are often found in an operon with 6S structural RNA, and show a similar pattern of high expression during stationary phase. The function may be to deplete folate to slow 1-carbon biosynthetic metabolism [Central intermediary metabolism, One-carbon metabolism]. Length = 179

>gnl|CDD|216717 pfam01812, 5-FTHF_cyc-lig, 5-formyltetrahydrofolate cyclo-ligase family

 Score =  128 bits (324), Expect = 1e-36
 Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 27/208 (12%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           K+ LR ++    + +   +R+    A+   +      + ++ +  Y+S     E+DT  +
Sbjct: 1   KQELRKQLLAKRRALSEEERAAASRALHQKLPSFVGAQKAKRVALYVSVK--GEIDTREL 58

Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD-LVANSMNILEPSLLDSDG 191
           +  +L        +  K + +PR    +  +  +     +  L +    + EP     + 
Sbjct: 59  IELLL--------EEGKLVLLPRPRPDSGLVVRITPYYPETGLPSGPYGLPEPI----EE 106

Query: 192 NQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVA 251
            Q E    A   +DL+++PG+AFDR G RLGRGGGYYD +L + Q          PL V 
Sbjct: 107 EQREL---ALNQIDLVLVPGVAFDRQGYRLGRGGGYYDRYLARLQ-------GHGPLTVG 156

Query: 252 LLYSLQLVDEESIPVTPYDVPVDALVSP 279
           L Y  QLV+   +P  P+DVPVD +V+ 
Sbjct: 157 LAYDEQLVER--LPQEPHDVPVDEIVTE 182

5-formyltetrahydrofolate cyclo-ligase or methenyl-THF synthetase EC:6.3.3.2 catalyzes the interchange of 5-formyltetrahydrofolate (5-FTHF) to 5-10-methenyltetrahydrofolate, this requires ATP and Mg2+. 5-FTHF is used in chemotherapy where it is clinically known as Leucovorin. Length = 182

>gnl|CDD|223290 COG0212, COG0212, 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]

 Score =  126 bits (318), Expect = 1e-35
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 27/211 (12%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           K +LR  + +    + P +R + D  +  ++      K ++ I  Y+      E+DT  +
Sbjct: 5   KSALRKLLLERRIALSPEERHEADQRIAKLLASLIEVKKAKTIALYVPFNG--EIDTRPL 62

Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGN 192
           + + L     G     K+L +P++ D            ++ L+ N   ILEP        
Sbjct: 63  IRQALR---RG-----KRLLLPKLRDYKLLFLRYIPDPLQPLIKNRFGILEP-----GEY 109

Query: 193 QCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVAL 252
             +        +DL+++P +AFD+ G RLG GGGYYD +L   +        ++   V +
Sbjct: 110 GRK---IPPPEIDLVLVPLVAFDKQGYRLGYGGGYYDRYLANLR-------GRKTPTVGI 159

Query: 253 LYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
            Y  QLVD   +P  P+DVP+DA+V+  G I
Sbjct: 160 AYDCQLVDH--LPREPHDVPLDAIVTEEGVI 188

Length = 191

>gnl|CDD|182385 PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional

 Score = 69.2 bits (169), Expect = 3e-14
 Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)

Query: 149 KKLYVPRVED-KNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLL 207
           K++Y+P +      N+  L      +LV N + I EP L         DV+  S  +D+L
Sbjct: 61  KRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKL------DVRDVLPLSR-LDVL 113

Query: 208 ILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVT 267
           I P +AFD  G RLG GGG+YD  L+ +Q         QP  V   +  QLV+   +PV 
Sbjct: 114 ITPLVAFDEYGQRLGMGGGFYDRTLQNWQ-----HYKTQP--VGYAHDCQLVE--KLPVE 164

Query: 268 PYDVPVDALVSP 279
            +D+P+ A+V+P
Sbjct: 165 EWDIPLPAVVTP 176

Length = 182

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	294
PLN02812	211	5-formyltetrahydrofolate cyclo-ligase	100.0
PRK10333	182	5-formyltetrahydrofolate cyclo-ligase family prote	100.0
PF01812	186	5-FTHF_cyc-lig: 5-formyltetrahydrofolate cyclo-lig	100.0
TIGR02727	181	MTHFS_bact 5,10-methenyltetrahydrofolate synthetas	100.0
KOG3093	200	consensus 5-formyltetrahydrofolate cyclo-ligase [C	100.0
COG0212	191	5-formyltetrahydrofolate cyclo-ligase [Coenzyme me	100.0
KOG4410	396	consensus 5-formyltetrahydrofolate cyclo-ligase [C	99.7

>PLN02812 5-formyltetrahydrofolate cyclo-ligase

Probab=100.00  E-value=4.1e-54  Score=385.45  Aligned_cols=205  Identities=66%  Similarity=1.078  Sum_probs=171.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q 022651           69 IFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMR  148 (294)
Q Consensus        69 ~~~~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~G  148 (294)
                      +.+.|++||++++++|++++++++...|.+|+++|.+++.|+++++|++|+|+++.+||||.+|++.+++        .|
T Consensus         3 ~~~~K~~lR~~~~~~R~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~~~~Evdt~~li~~~~~--------~g   74 (211)
T PLN02812          3 IREQKKALRKEVRRALKALSPEQRAQEDAAIQSRLLELPWFKSSKRLCAYVSCAKLREVDTSKILSEILQ--------NP   74 (211)
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHcChhhHhcCEEEEEEECCCCCCcCHHHHHHHHHH--------cC
Confidence            5678999999999999999999999999999999999999999999999999982239999999999998        89


Q ss_pred             -cEEEeeeEecCCCceEEEEcCCC-cccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCc
Q 022651          149 -KKLYVPRVEDKNSNMRMLKISAV-KDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGG  226 (294)
Q Consensus       149 -K~V~vP~v~~~~~~m~f~~~~~~-~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgG  226 (294)
                       |+|+||++.+.+..|.|+.|.+. ++|..|.|||+||.........+.+.+.....+|||||||||||++|+|||||||
T Consensus        75 ~k~v~lP~~~~~~~~m~f~~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~~~~~~~~iDliiVP~lafD~~G~RLG~GgG  154 (211)
T PLN02812         75 DKRLYVPRVEDKNSNMRMLHITDMADDLVANSMNILEPTPVDADGNPREDVLQAPEPLDLLLLPGLAFDRSGRRLGRGGG  154 (211)
T ss_pred             CcEEEEeEEecCCCeEEEEEeCCccccccCCCCCccCCCccccccccccccccCCCCCCEEEeCceEECCCCCcCcCCCc
Confidence             99999999765446999999986 7899999999999753111100001111356789999999999999999999999


Q ss_pred             chHHHHHHhhhhHhhhhccCceEEEEEccccccc--CCCCCCCCCcccCCEEEeCCceE
Q 022651          227 YYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVD--EESIPVTPYDVPVDALVSPRGFI  283 (294)
Q Consensus       227 YYDRfL~~~~~~~~~~~~~~~~~IGlaf~~Qivd--~~~lP~e~hDiplD~IITe~gvi  283 (294)
                      ||||||+.++.......+.++.+|||||++|+++  +  ||+|+||+|||+||||+|++
T Consensus       155 yYDR~L~~~~~~~~~~~~~~~~~igla~~~Q~~~~~~--iP~e~hD~~ld~iiTe~~vi  211 (211)
T PLN02812        155 YYDTFLSKYQELAKEKGWKQPLLVALSYSPQILDEGS--VPVDETDVLVDALVTPSGVI  211 (211)
T ss_pred             hHHHHHHHhhhhhccccCCCceEEEEeeheeeECCCC--CCCccccccCCEEEcCCcCC
Confidence            9999999875211001122466899999999999  8  99999999999999999974

>PRK10333 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional

Probab=100.00  E-value=3.9e-52  Score=364.87  Aligned_cols=180  Identities=28%  Similarity=0.485  Sum_probs=160.3

Q ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcEEEeeeEecC
Q 022651           80 IRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDK  159 (294)
Q Consensus        80 ~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~V~vP~v~~~  159 (294)
                      ++++|++|+++++...|++|+++|.+++.|+++++|++|+|++  +||||.+|++.+++        .||+|+||+|.+.
T Consensus         2 ~~~~R~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~--~Evdt~~li~~~~~--------~gk~v~lP~v~~~   71 (182)
T PRK10333          2 IRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFD--GELDTQPLIEQLWR--------AGKRVYLPVLHPF   71 (182)
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHhChhhhcCCEEEEEcCCC--CCcCHHHHHHHHHH--------CCCEEEEeEEecC
Confidence            5788999999999999999999999999999999999999998  69999999999998        8999999999764


Q ss_pred             -CCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchHHHHHHhhhh
Q 022651          160 -NSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKL  238 (294)
Q Consensus       160 -~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYDRfL~~~~~~  238 (294)
                       ...|.|+.+++.++|++|.|||+||....      .. ..+...+|+|||||||||++|+|||||||||||||+.++. 
T Consensus        72 ~~~~m~f~~~~~~~~l~~~~~gI~EP~~~~------~~-~~~~~~iDlviVP~laFD~~G~RLG~GgGyYDR~L~~~~~-  143 (182)
T PRK10333         72 SAGNLLFLNYHPQSELVMNRLKIHEPKLDV------RD-VLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQH-  143 (182)
T ss_pred             CCCEEEEEECCCCCccccCCCCCCCCCccc------cc-cCCcccCCEEEeCceEECCCCCcccCCcchHHHHHHHhcc-
Confidence             24599999999899999999999997421      01 1135678999999999999999999999999999998753 


Q ss_pred             HhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCceEec
Q 022651          239 AQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPI  285 (294)
Q Consensus       239 ~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gvi~~  285 (294)
                            .++.+|||||++|++++  ||+|+||+|||+||||+|++.+
T Consensus       144 ------~~~~~igla~~~Q~~~~--ip~e~hD~~ld~iiTe~~~~~~  182 (182)
T PRK10333        144 ------YKTQPVGYAHDCQLVEK--LPVEEWDIPLPAVVTPSKVWEW  182 (182)
T ss_pred             ------cCCcEEEEeeeeEEeCC--cCCCcccCcCCEEEeCCeEEeC
Confidence                  13458999999999999  9999999999999999999864

>PF01812 5-FTHF_cyc-lig: 5-formyltetrahydrofolate cyclo-ligase family; InterPro: IPR002698 5-formyltetrahydrofolate cyclo-ligase or methenyl-THF synthetase 6

Probab=100.00  E-value=1.1e-51  Score=361.44  Aligned_cols=183  Identities=34%  Similarity=0.651  Sum_probs=144.0

Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcEEE
Q 022651           73 KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLY  152 (294)
Q Consensus        73 K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~V~  152 (294)
                      |++||++++++|++|+++++...|+.|+++|.+++.++++++|++|+|++  +|+||.+|++.+++        .||+|+
T Consensus         1 K~~lR~~~~~~r~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~y~~~~--~Ev~t~~li~~~~~--------~gk~v~   70 (186)
T PF01812_consen    1 KKELRKEIRARRRALSPEERAEASQAICERLLALPEYRKAQTIALYLPMG--GEVDTRPLIERALK--------DGKRVY   70 (186)
T ss_dssp             HHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHCCHHHHCTSEEEE----T--TS---HHHHHHHHH--------TTCEEE
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhChhhhhhceEEEccCCC--CCCCHHHHHHHHHH--------cCCeEe
Confidence            89999999999999999999999999999999999999999999999998  69999999999999        999999


Q ss_pred             eeeEecCC---CceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchH
Q 022651          153 VPRVEDKN---SNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYD  229 (294)
Q Consensus       153 vP~v~~~~---~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYD  229 (294)
                      +|++..+.   ..|.|+.+...++|.+|.|||+||.....       .......+|||||||||||++|+||||||||||
T Consensus        71 lP~~~~~~~~~~~~~~~~~~~~~~l~~~~~gI~EP~~~~~-------~~~~~~~idlvlVP~lafd~~G~RLG~GgGyYD  143 (186)
T PF01812_consen   71 LPRVHPDDGRMRMMEFRRYDSDDPLEKGRFGIPEPDGESP-------PPDPPEEIDLVLVPGLAFDRNGNRLGYGGGYYD  143 (186)
T ss_dssp             EEEEETTCTEECEEEEEEESSCGCCEECETTCEEEESTCS-------EEGGGGG-SEEEEE-SEEETTSBEE-SSSTHHH
T ss_pred             cceecccccccceeEEeecCCcccccccccCccCCccccc-------cccccccCCEEEeCcEEECCCCCeEecCCCHHH
Confidence            99998865   24678888888999999999999975310       111123789999999999999999999999999


Q ss_pred             HHHHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeC
Q 022651          230 VFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSP  279 (294)
Q Consensus       230 RfL~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe  279 (294)
                      |||+.++.     ....+.+|||||++|++++  ||+|+||++||+||||
T Consensus       144 R~L~~~~~-----~~~~~~~igl~~~~q~~~~--iP~e~hD~~ld~iiTe  186 (186)
T PF01812_consen  144 RFLARLPP-----GRKKPLKIGLAFDFQIVDD--IPVEPHDIPLDAIITE  186 (186)
T ss_dssp             HHHHHHTS------SS--EEEEEE-GGGEES-------TTS-B-SEEEET
T ss_pred             hHHHhhhc-----ccCCCeEEEEeehhheeCC--CCCCcccccCCEEEcC
Confidence            99999864     1235789999999999998  9999999999999998

3.3.2 from EC catalyses the interchange of 5-formyltetrahydrofolate (5-FTHF) to 5-10-methenyltetrahydrofolate, this requires ATP and Mg2+ []. 5-FTHF is used in chemotherapy where it is clinically known as Leucovorin [].; GO: 0005524 ATP binding, 0030272 5-formyltetrahydrofolate cyclo-ligase activity, 0009396 folic acid-containing compound biosynthetic process; PDB: 1WKC_A 1SBQ_A 1U3G_A 1U3F_B 1YDM_B 1SOU_A 2JCB_B 3HY6_A 3HY4_A 3HXT_A ....

>TIGR02727 MTHFS_bact 5,10-methenyltetrahydrofolate synthetase

Probab=100.00  E-value=2.7e-50  Score=352.36  Aligned_cols=180  Identities=34%  Similarity=0.586  Sum_probs=159.0

Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcEEE
Q 022651           73 KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLY  152 (294)
Q Consensus        73 K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~V~  152 (294)
                      |++||++++++|++++.+++...|..|+++|.+++.|+++++|++|+|++  +|+||.+|++.+++        .||+|+
T Consensus         1 K~~lR~~~~~~r~~l~~~~~~~~~~~i~~~l~~~~~~~~~~~I~~Y~~~~--~E~~t~~li~~~~~--------~~k~v~   70 (181)
T TIGR02727         1 KKELRKKLLERRKALSSEERKAASEAIAKRLLALIEWKNAKTIALYLPLR--GEVDTRPLIEQLLK--------EGKRVA   70 (181)
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhChhhhcCCEEEEEcCCC--CCcCHHHHHHHHHH--------CCCEEE
Confidence            67899999999999999999999999999999999999999999999998  69999999999998        899999


Q ss_pred             eeeEecCC-CceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchHHH
Q 022651          153 VPRVEDKN-SNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVF  231 (294)
Q Consensus       153 vP~v~~~~-~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYDRf  231 (294)
                      ||++.+++ ..|.|..+...++|..+.|||+||....      ... ...+.+|+|||||||||++|+||||||||||||
T Consensus        71 lP~~~~~~~~~~~~~~~~~~~~l~~~~~gi~eP~~~~------~~~-~~~~~idlvivP~lafD~~G~RLG~GgGyYDR~  143 (181)
T TIGR02727        71 LPKVDPDGKEMLFFRIWSPSDLLTKGKFGILEPPGDS------TEP-VDPDEIDLIIVPGVAFDRRGYRLGYGGGYYDRF  143 (181)
T ss_pred             EEEEecCCCceeEEEecCCCCccccCCCCCCCCCCcc------cCc-CCcccCCEEEeCceEEcCCCccccCCcchHHHH
Confidence            99998654 2356667776668999999999997421      001 135678999999999999999999999999999


Q ss_pred             HHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeC
Q 022651          232 LKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSP  279 (294)
Q Consensus       232 L~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe  279 (294)
                      |+.++.        .+.+|||+|++|+++.  +|+|+||++||+||||
T Consensus       144 L~~~~~--------~~~~igv~~~~q~~~~--lp~e~~Di~ld~iiTe  181 (181)
T TIGR02727       144 LANLKG--------KTVVVGLAFDFQLVDE--LPREPHDVPVDAIITE  181 (181)
T ss_pred             HHhccc--------CCCEEEEEecceeeCc--cCCCccCccCCEEeCC
Confidence            998743        2348999999999999  9999999999999997

This enzyme, 5,10-methenyltetrahydrofolate synthetase, is also called 5-formyltetrahydrofolate cycloligase. Function of bacterial proteins in this family was inferred originally from the known activity of eukaryotic homologs. Recently, activity was shown explicitly for the member from Mycoplasma pneumonia. Members of this family from alpha- and gamma-proteobacteria, designated ygfA, are often found in an operon with 6S structural RNA, and show a similar pattern of high expression during stationary phase. The function may be to deplete folate to slow 1-carbon biosynthetic metabolism.

>KOG3093 consensus 5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]

Probab=100.00  E-value=3.5e-49  Score=339.77  Aligned_cols=196  Identities=39%  Similarity=0.670  Sum_probs=176.6

Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCC
Q 022651           67 EAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQ  146 (294)
Q Consensus        67 ~~~~~~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~  146 (294)
                      +.+...|+.||+.++..+++|+++.+.++|++|+++++++++|+++++|++|+||.+ +||+|..||+.+++        
T Consensus         2 ~~i~~~K~~LR~~lk~~L~ald~e~i~rQs~ai~~kV~e~~~fk~skrvs~YmSm~~-~Ev~T~~Ii~~~fq--------   72 (200)
T KOG3093|consen    2 DAISATKRLLRRQLKRSLGALDAEIIARQSEAISKKVLELPWFKNSKRVSIYMSMDK-GEVDTGEIIKEAFQ--------   72 (200)
T ss_pred             chHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHhhHHHHhcCceEEEEecCc-ccccHHHHHHHHHh--------
Confidence            457788999999999999999999999999999999999999999999999999996 69999999999999        


Q ss_pred             CCcEEEeeeEecCCCceEEEEcCCCccc---ccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeecc
Q 022651          147 MRKKLYVPRVEDKNSNMRMLKISAVKDL---VANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGR  223 (294)
Q Consensus       147 ~GK~V~vP~v~~~~~~m~f~~~~~~~~L---~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~  223 (294)
                      .||.||+|++...+..|.++++...+.+   ..+.|||++|.+.    ..+++.......+|||||||||||+.|.|||+
T Consensus        73 ~gK~vFiP~~~~~~s~m~Mvr~~~~e~~~~l~~t~w~i~qp~~~----~~re~~~~t~~~lDLiivPGvAFd~~g~RlGh  148 (200)
T KOG3093|consen   73 DGKEVFIPRCTHTSSKMDMVRIDHMEELESLPMTSWGIRQPKPG----GPREDALETGHPLDLIIVPGVAFDRKGARLGH  148 (200)
T ss_pred             cCCeEEeeeeecCCCceeEEEeCChHHHhhCcccccCCCCCCCC----CchhhhccCCCcceEEEecccccchhhhhccC
Confidence            9999999999877778999999887554   4578999999863    34566554445799999999999999999999


Q ss_pred             CCcchHHHHHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCC
Q 022651          224 GGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPR  280 (294)
Q Consensus       224 GgGYYDRfL~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~  280 (294)
                      |+||||+||.++....   .+.+|.+||||+.+|++.+  ||+++||+.||.||||+
T Consensus       149 GkGYYD~flkry~~~~---~~~kp~~vgL~l~EQI~~~--IPv~~~Dv~lD~vvt~~  200 (200)
T KOG3093|consen  149 GKGYYDDFLKRYQIHA---PEQKPLLVGLCLKEQILSE--IPVEEHDVKLDAVVTED  200 (200)
T ss_pred             CcchHHHHHHHHHHhc---cccCchhhhhhhhHhhccc--CCCCccceeeeEeecCC
Confidence            9999999999997642   5778999999999999998  99999999999999985

>COG0212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]

Probab=100.00  E-value=2.7e-47  Score=336.72  Aligned_cols=186  Identities=31%  Similarity=0.566  Sum_probs=167.9

Q ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcE
Q 022651           71 QKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKK  150 (294)
Q Consensus        71 ~~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~  150 (294)
                      +.|++||++++++|.+|++..+...+..+++++..++.+.++++|++|+|++  +|+||.++++.+|+        +||+
T Consensus         3 ~~K~~lR~~~~~~r~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ia~y~~~~--~E~~~~~l~~~~l~--------~gk~   72 (191)
T COG0212           3 ATKSALRKLLLERRIALSPEERHEADQRIAKLLASLIEVKKAKTIALYVPFN--GEIDTRPLIRQALR--------RGKR   72 (191)
T ss_pred             hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccccccccEEEEEeccC--CCCCcHHHHHHHHH--------cCCE
Confidence            5799999999999999999999999999999999999999999999999998  69999999999998        9999


Q ss_pred             EEeeeEecCCCceEEEEcCCC--cccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcch
Q 022651          151 LYVPRVEDKNSNMRMLKISAV--KDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYY  228 (294)
Q Consensus       151 V~vP~v~~~~~~m~f~~~~~~--~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYY  228 (294)
                      |++|++.+  ..+.|..+.+.  ..+..+.|||.||....   .   .+ .+ ..+|+||||+||||++|+|||||||||
T Consensus        73 l~lP~~~~--~~~~f~~~~~~~~~~~~~~~~gi~eP~~~~---~---~~-~~-~~iDlvlvP~Vafd~~G~RLG~GgGyY  142 (191)
T COG0212          73 LLLPKLRD--YKLLFLRYIPDPLQPLIKNRFGILEPGEYG---R---KI-PP-PEIDLVLVPLVAFDKQGYRLGYGGGYY  142 (191)
T ss_pred             EEEeEEEc--CcceeEEecCCCCcccccccccccCCCccC---C---cc-CC-CcCCEEEeCceeECCCCccccCCCchH
Confidence            99999986  34778888887  88899999999997532   1   11 12 678999999999999999999999999


Q ss_pred             HHHHHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCceEec
Q 022651          229 DVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPI  285 (294)
Q Consensus       229 DRfL~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gvi~~  285 (294)
                      ||||+.+.       ..++.+||++|++|++|.  +|.|+||+|||.||||++++.+
T Consensus       143 DR~la~~~-------~~~~~~ig~~~~~Q~v~~--lP~e~hDv~ld~ivt~~~~~~~  190 (191)
T COG0212         143 DRYLANLR-------GRKTPTVGIAYDCQLVDH--LPREPHDVPLDAIVTEEGVIRC  190 (191)
T ss_pred             HHHHHhhc-------cCCCCEEEEEEeeeeecc--CCCCcccCcccEEEeCCceEec
Confidence            99999885       135679999999999999  9999999999999999999876

>KOG4410 consensus 5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]

Probab=99.70  E-value=9.4e-17  Score=147.18  Aligned_cols=187  Identities=21%  Similarity=0.299  Sum_probs=137.8

Q ss_pred             hHHHHHHHHHHHHHHHHHhc----CCHHHHH------HHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHH
Q 022651           67 EAIFQKKRSLRSKIRKDLKN----MDPIQRS------QEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEI  136 (294)
Q Consensus        67 ~~~~~~K~~LRk~~~~~R~~----ls~~~r~------~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~a  136 (294)
                      .++...|..+|.+++....+    +++.-..      ..+.++|+.+.++..|+.|+.|-+-.      .-.+..+...+
T Consensus        28 qd~~~~k~~iR~q~W~~me~~n~a~~prpvhhRIPnFvGa~~Aa~~~a~ld~F~~Aq~vKVnp------D~pl~~~r~L~  101 (396)
T KOG4410|consen   28 QDIEPTKRSIRVQTWKKMEEGNVAIGPRPVHHRIPNFVGADKAAALFANLDEFKKAQHVKVNP------DRPLHEFRELA  101 (396)
T ss_pred             CCcchhHHHHHHHHHHHHhhcccccCCcchhhcCccccchHHHHHHhhhhHHHhhcceeecCC------CchHHHHHHHH
Confidence            46788899999999987543    3332211      24567788888999999999998753      22466677777


Q ss_pred             HhcCCCCCCCCCcEEEeeeEecCCCceEEEEcCCCcc-----ccc-------ccCCccCCCCCCCCCCccccccccCCCC
Q 022651          137 LSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD-----LVA-------NSMNILEPSLLDSDGNQCEDVMQASEPV  204 (294)
Q Consensus       137 l~~~~~~~~~~GK~V~vP~v~~~~~~m~f~~~~~~~~-----L~~-------g~~GI~EP~~~~~~~~~~~~~~~~~~~i  204 (294)
                      |.        ..|.+++|......  --|..++...+     +..       .+|+.  +..           ++.--.+
T Consensus       102 L~--------~~Ksll~PspRlrt--glf~kv~~~~~ate~i~~~c~tsqgv~ky~~--~IG-----------LDs~lkv  158 (396)
T KOG4410|consen  102 LL--------ADKSLLLPSPRLRT--GLFLKVDVLADATEEIKKECLTSQGVQKYRS--EIG-----------LDSGLKV  158 (396)
T ss_pred             hh--------cccceecCCchhhc--ceeeeeccCCCCcHHHHHHHHhhhhHHHhCc--ccc-----------cccCceE
Confidence            76        78999999875433  23556654311     111       12332  221           1122468


Q ss_pred             cEEEEeceeEeCCCCeeccCCcchHHHHHHhhhhHhhhhccCceEEEEEcccccccCCCCCC---CCCcccCCEEEeCCc
Q 022651          205 DLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPV---TPYDVPVDALVSPRG  281 (294)
Q Consensus       205 DLiIVPglAFD~~G~RLG~GgGYYDRfL~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~---e~hDiplD~IITe~g  281 (294)
                      |||+|..||+++.|+|||.|-||-|--...+..++  ...+++++|.++||||+||+  ||.   +.||+|||+|.||++
T Consensus       159 DlvViGSVavs~~G~RiGkGeGfAdLeygmli~mG--Ai~~~TpvVTiVHDcQvVD~--iP~el~~~hD~pVDiI~TPTr  234 (396)
T KOG4410|consen  159 DLVVIGSVAVSREGYRIGKGEGFADLEYGMLIEMG--AITPKTPVVTIVHDCQVVDS--IPPELFQKHDTPVDIIATPTR  234 (396)
T ss_pred             EEEEEeeEEecccceeeccCCchhhhhhHHHHHhc--ccCCCCceEEEEecceeecc--CCHHHHhhcCCCccEEeccce
Confidence            99999999999999999999999999999887765  34456778999999999999  996   589999999999999


Q ss_pred             eEecC
Q 022651          282 FIPIS  286 (294)
Q Consensus       282 vi~~~  286 (294)
                      +|+..
T Consensus       235 vI~t~  239 (396)
T KOG4410|consen  235 VIRTP  239 (396)
T ss_pred             EEecC
Confidence            99875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	294
3hxt_A	203	Structure Of Human Mthfs Length = 203		5e-11
1sou_A	194	Nmr Structure Of Aquifex Aeolicus 5,10- Methenyltet		1e-05

>pdb|3HXT|A Chain A, Structure Of Human Mthfs Length = 203

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 68  AIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREV 127
           A+   KRSLR ++++ L+ M   +R ++   +   V+  S ++ S+ I  ++S     E+
Sbjct: 5   AVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQD--EI 62
Query: 128 DTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD---LVANSMNILEP 184
           +T  I+ +I         Q  K  ++PR   ++++M M++I + ++   L   S NI +P
Sbjct: 63  ETEEIIKDIF--------QRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQP 114
Query: 185 SLLDSDGNQCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKK 234
                +G+  E+ + ++  +DL+ +PGL FD           YYD +LK+
Sbjct: 115 G----EGDVREEAL-STGGLDLIFMPGLGFDKHGNRLGRGKGYYDAYLKR 159

>pdb|1SOU|A Chain A, Nmr Structure Of Aquifex Aeolicus 5,10- Methenyltetrahydrofolate Synthetase: Northeast Structural Genomics Consortium Target Qr46 Length = 194

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 34/206 (16%)
Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           K  LR K+     N+   +R +    V   +     FK S+ +  Y  C    EVD + +
Sbjct: 3   KSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALY--CPIKGEVDLTPL 60
Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGN 192
             E+L           K+L +P+VE   + + + ++ +   L   +  I+EP        
Sbjct: 61  FPEVLKE---------KELILPKVE--GNEISLYRVHSPACLGVGAFGIMEP-------- 101
Query: 193 QCEDVMQASEPVDLLILPGLAFDXXXXXXXXXXXYYDVFLKKYQKLAQEQKWKQPXXXXX 252
             E      E VD + +PG+AFD           YYD  LK+ + L     +        
Sbjct: 102 -VEGERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRVKGLKVGVAYSFQVF--- 157
Query: 253 XXXXXXVDEESIPVTPYDVPVDALVS 278
                    E +P   +D+PVD LV+
Sbjct: 158 ---------ERLPRDAWDIPVDVLVT 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	294
3hy3_A	203	5-formyltetrahydrofolate cyclo-ligase; antifolate,	5e-61
1ydm_A	187	Hypothetical protein YQGN; northeast structural ge	4e-60
2jcb_A	200	5-formyltetrahydrofolate cyclo-ligase family PROT;	1e-59
1sou_A	194	5,10-methenyltetrahydrofolate synthetase; structur	3e-50
1wkc_A	184	HB8 TT1367 protein; structural genomics, riken str	1e-47
1sbq_A	189	H91_ORF164, 5,10-methenyltetrahydrofolate syntheta	2e-38

>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, ATP-binding, binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A Length = 203

 Score =  191 bits (488), Expect = 5e-61
 Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 24/220 (10%)

Query: 67  EAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLRE 126
            A+   KRSLR ++++ L+ M   +R ++   +   V+  S ++ S+ I  ++S     E
Sbjct: 4   AAVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQD--E 61

Query: 127 VDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKD---LVANSMNILE 183
           ++T  I+ +I         Q  K  ++PR   ++++M M++I + ++   L   S NI +
Sbjct: 62  IETEEIIKDIF--------QRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQ 113

Query: 184 PSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQK 243
           P     +G+  E+ +      DL+ +PGL FD+ G RLGRG GYYD +LK+  +     +
Sbjct: 114 PG----EGDVREEALSTGGL-DLIFMPGLGFDKHGNRLGRGKGYYDAYLKRCLQ----HQ 164

Query: 244 WKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
             +P  +AL +  Q+  +  +PV   D+ VD ++      
Sbjct: 165 EVKPYTLALAFKEQICLQ--VPVNENDMKVDEVLYEDSST 202

>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis} Length = 187

 Score =  188 bits (480), Expect = 4e-60
 Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 29/211 (13%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           K  LR K  + L  +      Q+   +   +     ++ +  I   IS     E+ T  +
Sbjct: 2   KSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISRGL--EIPTRPV 59

Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGN 192
           + +          +  K++ +P+       M+         L      +LEP        
Sbjct: 60  IEQAW--------EEGKQVCIPKCHPDTKKMQFRTYQTDDQLETVYAGLLEP-----VIE 106

Query: 193 QCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVAL 252
           + ++V      +DL+I+PG+ FD +G R+G GGGYYD +L +Y          +   V+L
Sbjct: 107 KTKEV--NPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEY----------EGKTVSL 154

Query: 253 LYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
           L   QL     +P  P+D+PV  L++    I
Sbjct: 155 LLECQLFAH--VPRLPHDIPVHKLITEDRII 183

>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family PROT; folate metabolism; HET: ADP; 1.6A {Bacillus anthracis} Length = 200

 Score =  187 bits (478), Expect = 1e-59
 Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 29/220 (13%)

Query: 64  HQLEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCAS 123
           H    + ++K  LR +I + + ++   + +     +   + E   +  ++ I   +S  +
Sbjct: 4   HHHHHVREEKLRLRKQIIEHMNSLSKERYTTLSEQIVFSLYEQKEWAEAKTIGITLSMEN 63

Query: 124 LREVDTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILE 183
             EV+T  I+ +          +  K++ VP+   +   M   +IS    L    MN+ E
Sbjct: 64  --EVNTYPIIEKAW--------KEGKRVVVPKCNKETRTMSFRQISNFDQLETVYMNLRE 113

Query: 184 PSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQK 243
           P          E+V   ++ +DL I+PG+A+   G R+G GGGYYD +L  Y        
Sbjct: 114 P-----IPALTEEV--NADEIDLQIVPGVAYTERGERIGYGGGYYDRYLVHY-------- 158

Query: 244 WKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
             +   ++L YS Q+V+   IPV P+D  V+ +++ +G +
Sbjct: 159 --KGKTLSLAYSFQMVEH--IPVEPFDKNVEKIITEKGTM 194

>1sou_A 5,10-methenyltetrahydrofolate synthetase; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Aquifex aeolicus} SCOP: c.124.1.6 Length = 194

 Score =  163 bits (416), Expect = 3e-50
 Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 34/211 (16%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           K  LR K+     N+   +R +    V   +     FK S+ +  Y       EVD + +
Sbjct: 3   KSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIKG--EVDLTPL 60

Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGN 192
             E+L           K+L +P+VE     + + ++ +   L   +  I+EP        
Sbjct: 61  FPEVLKE---------KELILPKVEGNE--ISLYRVHSPACLGVGAFGIMEPV------- 102

Query: 193 QCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVAL 252
             E      E VD + +PG+AFD  G RLG G GYYD  LK+           + L V +
Sbjct: 103 --EGERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRV----------KGLKVGV 150

Query: 253 LYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
            YS Q+ +   +P   +D+PVD LV+ +   
Sbjct: 151 AYSFQVFER--LPRDAWDIPVDVLVTEKNVR 179

>1wkc_A HB8 TT1367 protein; structural genomics, riken structural genomics/proteomi initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.124.1.6 Length = 184

 Score =  156 bits (397), Expect = 1e-47
 Identities = 53/215 (24%), Positives = 82/215 (38%), Gaps = 43/215 (20%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           K  LR + R   + +D    S+   AV   +L     +  R+I  Y       E++   +
Sbjct: 3   KAELRRRARAAWRRLDLKALSR---AVGAALLPWLRERGFRHILLYHPLPH--ELNLLPL 57

Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGN 192
           +                + Y+P+V  K      L +     L      +LEP+       
Sbjct: 58  ME-----------AYPARYYLPKVAGKG-----LTVHPFGPLAPGPFGLLEPT------- 94

Query: 193 QCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVAL 252
                       DL+++PGLAFDR G RLG G G+YD FLK+           +   V +
Sbjct: 95  --TPPEDPRVL-DLVVVPGLAFDREGYRLGHGQGFYDRFLKEV----------RAATVGV 141

Query: 253 LYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISP 287
           +    L     +P  P+DVPVD L +  G   +  
Sbjct: 142 VPQALLFPA--LPRDPWDVPVDHLATEAGVEAVKR 174

>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} SCOP: c.124.1.6 PDB: 1u3f_A* 1u3g_A* Length = 189

 Score =  133 bits (336), Expect = 2e-38
 Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 48/212 (22%)

Query: 69  IFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLES-SWFKASRNICAYISCASLREV 127
               K +LR +I +    +  I++S  D  +   ++   +     + I  Y    +  EV
Sbjct: 24  GHMDKNALRKQILQKRMALSTIEKSHLDQKINQKLVAFLTPKPCIKTIALYEPIKN--EV 81

Query: 128 DTSRIVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLL 187
                  E L          + +   P+V   ++ +           +    N  EP+ +
Sbjct: 82  TFVDFFFEFLKIN-------QIRAVYPKVI-SDTEI---------IFIDQETNTFEPNQI 124

Query: 188 DSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQP 247
           D                   ++P + F++   RLG G GYYD +L +          +Q 
Sbjct: 125 D-----------------CFLIPLVGFNKDNYRLGFGKGYYDRYLMQLT--------RQQ 159

Query: 248 LLVALLYSLQLVDEESIPVTPYDVPVDALVSP 279
             + + YS Q  D       P+DV +D +++ 
Sbjct: 160 PKIGIAYSFQKGD---FLADPWDVQLDLIIND 188

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	294
3hy3_A	203	5-formyltetrahydrofolate cyclo-ligase; antifolate,	100.0
2jcb_A	200	5-formyltetrahydrofolate cyclo-ligase family PROT;	100.0
1ydm_A	187	Hypothetical protein YQGN; northeast structural ge	100.0
1sou_A	194	5,10-methenyltetrahydrofolate synthetase; structur	100.0
1wkc_A	184	HB8 TT1367 protein; structural genomics, riken str	100.0
1sbq_A	189	H91_ORF164, 5,10-methenyltetrahydrofolate syntheta	100.0

>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, ATP-binding, binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A

Probab=100.00  E-value=4.7e-56  Score=394.23  Aligned_cols=196  Identities=30%  Similarity=0.539  Sum_probs=168.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCC
Q 022651           66 LEAIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNG  145 (294)
Q Consensus        66 ~~~~~~~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~  145 (294)
                      |+++...|++||++++++|++|+++++..+|++|+++|++++.|+++++|++|+|++  +||||.+|++.+|+       
T Consensus         3 ~~~~~~~K~~LR~~~~~~R~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~--~Evdt~~li~~~~~-------   73 (203)
T 3hy3_A            3 AAAVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQ--DEIETEEIIKDIFQ-------   73 (203)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTCHHHHHCSEEECCCCCT--TSCCCHHHHHHHHH-------
T ss_pred             hhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhCHhhhcCCEEEEEcCCC--CCcCHHHHHHHHHH-------
Confidence            667889999999999999999999999999999999999999999999999999998  69999999999999       


Q ss_pred             CCCcEEEeeeEecCCCceEEEEcCCCc---ccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeec
Q 022651          146 QMRKKLYVPRVEDKNSNMRMLKISAVK---DLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLG  222 (294)
Q Consensus       146 ~~GK~V~vP~v~~~~~~m~f~~~~~~~---~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG  222 (294)
                       .||+|+||++.+.+..|.|+.|.+++   .|.+|.|||+||....    ...+.+ ....+|||||||||||++|+|||
T Consensus        74 -~gk~v~lP~~~~~~~~m~~~~~~~~~~~~~L~~g~~GI~EP~~~~----~~~~~~-~~~~~DlvlVP~vaFD~~G~RLG  147 (203)
T 3hy3_A           74 -RGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGD----VREEAL-STGGLDLIFMPGLGFDKHGNRLG  147 (203)
T ss_dssp             -TTCEEEEEEEETTTTEEEEEEECCHHHHTTSCBCTTSCBCCCTTC----CCCBGG-GTTCCSEEEECCSEECTTCCEEC
T ss_pred             -CCCEEEEEEEecCCCeEEEEEeCChhhhhhccCCCCCCCCCCCcc----cccccc-CccCCCEEEeCCeEECCCCceec
Confidence             89999999998655579999999864   5789999999997421    111112 34579999999999999999999


Q ss_pred             cCCcchHHHHHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCce
Q 022651          223 RGGGYYDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGF  282 (294)
Q Consensus       223 ~GgGYYDRfL~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gv  282 (294)
                      ||||||||||+.++..    .+.++.+|||||++|++++  ||+|+||+|||+||||+|+
T Consensus       148 ~GgGyYDR~L~~~~~~----~~~~~~~igla~~~Q~~~~--lP~e~hDi~ld~iiTe~~~  201 (203)
T 3hy3_A          148 RGKGYYDAYLKRCLQH----QEVKPYTLALAFKEQICLQ--VPVNENDMKVDEVLYEDSS  201 (203)
T ss_dssp             SSSCHHHHHHHHHTTT----CSSCCEEEEECCGGGBCSC--CCCC--CCCCSEEECC---
T ss_pred             CCCchHHHHHHHhhhh----cCCCCeEEEEecHHhccCC--CCCCcccccCCEEEeCCCc
Confidence            9999999999987531    1345778999999999999  9999999999999999986

>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family PROT; folate metabolism; HET: ADP; 1.6A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-54  Score=385.14  Aligned_cols=187  Identities=27%  Similarity=0.496  Sum_probs=169.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCC
Q 022651           68 AIFQKKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQM  147 (294)
Q Consensus        68 ~~~~~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~  147 (294)
                      .+.+.|++||++++++|++|+++++..+|.+|+++|.+++.|+++++|++|+|++  +|+||.+|++.+|+        .
T Consensus         8 ~~~~~K~~LR~~~~~~R~~ls~~~~~~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~--~Evdt~~li~~~~~--------~   77 (200)
T 2jcb_A            8 HVREEKLRLRKQIIEHMNSLSKERYTTLSEQIVFSLYEQKEWAEAKTIGITLSME--NEVNTYPIIEKAWK--------E   77 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSHHHHHCSEEECCCCCT--TSCCCHHHHHHHHH--------T
T ss_pred             hhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhChhhhcCCEEEEECCCC--CCCCHHHHHHHHHH--------C
Confidence            4788999999999999999999999999999999999999999999999999998  69999999999999        8


Q ss_pred             CcEEEeeeEecCCCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcc
Q 022651          148 RKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGY  227 (294)
Q Consensus       148 GK~V~vP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGY  227 (294)
                      ||+|+||++...+..|.|+.|++.++|++|.|||+||....      ... .+...+|||||||||||++|+||||||||
T Consensus        78 gk~v~lP~~~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~------~~~-~~~~~iDlvlVP~vAfD~~G~RLG~GgGy  150 (200)
T 2jcb_A           78 GKRVVVPKCNKETRTMSFRQISNFDQLETVYMNLREPIPAL------TEE-VNADEIDLQIVPGVAYTERGERIGYGGGY  150 (200)
T ss_dssp             TCEEEEEEEETTTTEEEEEEESSGGGEEEEETTEEEECGGG------CEE-CCGGGCSEEECCCSEECTTSCEECSSSCH
T ss_pred             CCEEEEeEEEcCCCcEEEEEeCCCcccccCCCCCCCCCCcc------ccc-CCccCCCEEEECCeEECCCCCeeccCCch
Confidence            99999999976555799999999899999999999996421      001 13457899999999999999999999999


Q ss_pred             hHHHHHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCceE
Q 022651          228 YDVFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFI  283 (294)
Q Consensus       228 YDRfL~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gvi  283 (294)
                      |||||+.++          ..+|||+|++|++++  ||+|+||+|||+||||+|++
T Consensus       151 YDR~La~~~----------~~~igla~~~Q~v~~--lP~e~hDi~ld~iiTe~~~~  194 (200)
T 2jcb_A          151 YDRYLVHYK----------GKTLSLAYSFQMVEH--IPVEPFDKNVEKIITEKGTM  194 (200)
T ss_dssp             HHHHTTTCC----------SEEEEECCGGGBCSC--CCCCTTCCCCSEEEETTEEE
T ss_pred             HHHHHhhcC----------CCEEEEEehhhccCC--CCCCccCCcCCEEEECCeEE
Confidence            999998753          257999999999999  99999999999999999998

>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=5.2e-55  Score=382.98  Aligned_cols=186  Identities=26%  Similarity=0.435  Sum_probs=162.9

Q ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcEE
Q 022651           72 KKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKL  151 (294)
Q Consensus        72 ~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~V  151 (294)
                      .|++||++++++|++|+++++..+|.+|+++|.+++.|+++++|++|+|++  +|+||.+|++.+|+        .||+|
T Consensus         1 ~K~~lR~~~~~~r~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~y~~~~--~Evdt~~li~~~~~--------~gk~v   70 (187)
T 1ydm_A            1 MKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISRG--LEIPTRPVIEQAWE--------EGKQV   70 (187)
T ss_dssp             ---CHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHTCSEEECCCCCT--TSCCCHHHHHHHHH--------TTCEE
T ss_pred             CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhCHHhhhCCEEEEECCCC--CCCCHHHHHHHHHH--------CCCEE
Confidence            388999999999999999999999999999999999999999999999998  69999999999999        89999


Q ss_pred             EeeeEecCCCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchHHH
Q 022651          152 YVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVF  231 (294)
Q Consensus       152 ~vP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYDRf  231 (294)
                      +||++...+..|.|+.|++.++|++|.|||+||....      ... .+...+|||||||||||++|+||||||||||||
T Consensus        71 ~lP~~~~~~~~m~f~~~~~~~~L~~~~~gi~EP~~~~------~~~-~~~~~iDlvivP~vafD~~G~RLG~GgGyYDR~  143 (187)
T 1ydm_A           71 CIPKCHPDTKKMQFRTYQTDDQLETVYAGLLEPVIEK------TKE-VNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRY  143 (187)
T ss_dssp             EEECC---CCCCCEEECCCCTTHHHHHTTSCCCC--C------CCC-CCGGGCCEEECCCSEEETTSCEECCSCCSTTTG
T ss_pred             EEeEEecCCCcEEEEEeCCCCccCcCCCCCCCCCCcc------ccc-CCccCCCEEEeCCeEECCCCCcccCCccHHHHH
Confidence            9999864344699999999889999999999997421      001 123578999999999999999999999999999


Q ss_pred             HHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCceEecC
Q 022651          232 LKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPIS  286 (294)
Q Consensus       232 L~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gvi~~~  286 (294)
                      |+.++          ..+||++|++|++++  ||+|+||+|||+||||++++++.
T Consensus       144 L~~~~----------~~~igla~~~Q~~~~--lP~e~hD~~ld~iiTe~~~~~~~  186 (187)
T 1ydm_A          144 LSEYE----------GKTVSLLLECQLFAH--VPRLPHDIPVHKLITEDRIISCF  186 (187)
T ss_dssp             GGTCC----------SEEEEECCGGGEESC--CCCCTTCCCCSEEECSSCEEECC
T ss_pred             HHhCC----------CCEEEEEeHHHhcCC--CCCccccCcCCEEEECCcEEecc
Confidence            98753          257999999999998  99999999999999999999875

>1sou_A 5,10-methenyltetrahydrofolate synthetase; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Aquifex aeolicus} SCOP: c.124.1.6

Probab=100.00  E-value=2.6e-53  Score=374.55  Aligned_cols=183  Identities=30%  Similarity=0.507  Sum_probs=166.1

Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcEEE
Q 022651           73 KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLY  152 (294)
Q Consensus        73 K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~V~  152 (294)
                      |++||++++++|++++++++..+|.+|+++|.+++.|+++++|++|+|++  +|+||.+|++.+|+        . |+|+
T Consensus         3 K~~lR~~~~~~r~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~y~~~~--~Evdt~~li~~~~~--------~-k~v~   71 (194)
T 1sou_A            3 KSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIK--GEVDLTPLFPEVLK--------E-KELI   71 (194)
T ss_dssp             HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHCHHHHHCCEEEECCCCS--SCCCCGGGHHHHHH--------H-SEEE
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhChhhhcCCEEEEECCCC--CCCCHHHHHHHHHH--------c-CCEE
Confidence            89999999999999999999999999999999999999999999999998  69999999999998        8 9999


Q ss_pred             eeeEecCCCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchHHHH
Q 022651          153 VPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFL  232 (294)
Q Consensus       153 vP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYDRfL  232 (294)
                      ||++ . +..|.|+.|++.++|++|.|||+||...        .. .....+|||||||||||++|+|||||||||||||
T Consensus        72 lP~~-~-~~~m~f~~~~~~~~L~~g~~GI~EP~~~--------~~-~~~~~iDlvlvP~vafD~~G~RLG~GgGyYDR~L  140 (194)
T 1sou_A           72 LPKV-E-GNEISLYRVHSPACLGVGAFGIMEPVEG--------ER-VNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLL  140 (194)
T ss_dssp             EEEE-S-SSSEEEEEESSSCCCEECSSSCEECCSS--------EE-ECGGGCSEEEECCSCBCSSSCBCCSCCSSHHHHH
T ss_pred             EEEe-c-CCeeEEEEECCCCccCCCCCCCCCCCcc--------cc-CCCCCCCEEEECCeEECCCCceeccCCcHHHHHH
Confidence            9998 3 3469999999989999999999999630        01 1235789999999999999999999999999999


Q ss_pred             HHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCceEecCCcc
Q 022651          233 KKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPVA  289 (294)
Q Consensus       233 ~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gvi~~~~~~  289 (294)
                      +.++          +.+||+||++|++++  ||+|+||+|||+||||++++++....
T Consensus       141 ~~~~----------~~~igla~~~Q~v~~--lP~e~hDi~ld~iiTe~~~~~~~~~~  185 (194)
T 1sou_A          141 KRVK----------GLKVGVAYSFQVFER--LPRDAWDIPVDVLVTEKNVRRLRDGR  185 (194)
T ss_dssp             HHCC----------SEEEEECCGGGBCSC--CCCCSCCCCCSEEECSSCEEESCCCC
T ss_pred             HhcC----------CCEEEEEchHhccCC--CCCCcccccCCEEEECCeEEEecCCC
Confidence            9763          357999999999998  99999999999999999999987543

>1wkc_A HB8 TT1367 protein; structural genomics, riken structural genomics/proteomi initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.124.1.6

Probab=100.00  E-value=5.8e-51  Score=356.82  Aligned_cols=173  Identities=29%  Similarity=0.497  Sum_probs=149.2

Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcEEE
Q 022651           73 KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKLY  152 (294)
Q Consensus        73 K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~V~  152 (294)
                      |++||++++++|++++.++   .|.+|+++|.+++.|+++++|++|+|++  +|+||.+|++  |+        . |+|+
T Consensus         3 K~~lR~~~~~~r~~l~~~~---~s~~i~~~l~~~~~~~~a~~I~~y~~~~--~Evdt~~li~--~~--------~-k~v~   66 (184)
T 1wkc_A            3 KAELRRRARAAWRRLDLKA---LSRAVGAALLPWLRERGFRHILLYHPLP--HELNLLPLME--AY--------P-ARYY   66 (184)
T ss_dssp             HHHHHHHHHHHHHTSCHHH---HHHHHHHHHHHHHHHHTCCEEECCCCCT--TCCCCTTHHH--HS--------C-CEEE
T ss_pred             HHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhChhhhcCCEEEEECCCC--CCcCHHHHHH--hh--------c-CCEE
Confidence            8999999999999999987   7889999999999999999999999998  6999999999  76        8 9999


Q ss_pred             eeeEecCCCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchHHHH
Q 022651          153 VPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFL  232 (294)
Q Consensus       153 vP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYDRfL  232 (294)
                      ||++.++  .|.|+.|+   +|.+|.|||+|| ...        . .....+|||||||||||++|+|||||||||||||
T Consensus        67 lP~~~~~--~m~f~~~~---~L~~~~~gi~EP-~~~--------~-~~~~~iDlvlvP~vafD~~G~RLG~GgGyYDR~L  131 (184)
T 1wkc_A           67 LPKVAGK--GLTVHPFG---PLAPGPFGLLEP-TTP--------P-EDPRVLDLVVVPGLAFDREGYRLGHGQGFYDRFL  131 (184)
T ss_dssp             EEEEETT--EEEEEESC---CBC-------CB-CSC--------C-BCGGGCSEEEECCSEEETTSCEECCSSCHHHHHH
T ss_pred             EeEEeCC--ceEEEEec---ccCCCCCCCCCC-CCc--------c-CCCCCCCEEEECcEEECCCCCEeeCCccHHHHHH
Confidence            9998644  69999998   899999999999 321        0 1235789999999999999999999999999999


Q ss_pred             HHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCceEecCCc
Q 022651          233 KKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPV  288 (294)
Q Consensus       233 ~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gvi~~~~~  288 (294)
                      +.++          +.+||++|++|++++  ||+|+||++||+||||+++++++..
T Consensus       132 ~~~~----------~~~igl~~~~Q~~~~--lp~e~hD~~ld~iiT~~~~~~~~~~  175 (184)
T 1wkc_A          132 KEVR----------AATVGVVPQALLFPA--LPRDPWDVPVDHLATEAGVEAVKRP  175 (184)
T ss_dssp             HHCC----------SEEEEECCGGGEESC--CCCCTTCCCCSEEEETTEEEECCCC
T ss_pred             HhcC----------CCEEEEEchhhccCC--CCCccccCccCEEEECCEEEEcCCC
Confidence            9763          357999999999999  9999999999999999999999765

>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} SCOP: c.124.1.6 PDB: 1u3f_A* 1u3g_A*

Probab=100.00  E-value=6.2e-47  Score=332.71  Aligned_cols=161  Identities=23%  Similarity=0.410  Sum_probs=144.8

Q ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCcccc-CCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCc-
Q 022651           72 KKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFK-ASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRK-  149 (294)
Q Consensus        72 ~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~-~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK-  149 (294)
                      .|++||++++++|++++++++..+|.+|+++|++++.|+ ++++|++|+|++  +|+||.+|++.+|+        .|| 
T Consensus        27 ~K~~LR~~~~~~R~~l~~~~~~~~s~~i~~~L~~~~~~~~~a~~I~~Y~~~~--~Evdt~~li~~~~~--------~gk~   96 (189)
T 1sbq_A           27 DKNALRKQILQKRMALSTIEKSHLDQKINQKLVAFLTPKPCIKTIALYEPIK--NEVTFVDFFFEFLK--------INQI   96 (189)
T ss_dssp             CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTCTTCCEEECCCCCT--TSCCCCHHHHHHHH--------HTTC
T ss_pred             cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhHHhHhhCCEEEEECCCC--CCCCHHHHHHHHHH--------cCCC
Confidence            499999999999999999999999999999999999999 999999999998  69999999999998        899 


Q ss_pred             EEEeeeEecCCCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchH
Q 022651          150 KLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYD  229 (294)
Q Consensus       150 ~V~vP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYD  229 (294)
                      +|+||++..+ ..|.|+.|++.            |.              ....+|||||||||||++|+||||||||||
T Consensus        97 ~v~lP~~~~~-~~m~f~~~~~~------------~~--------------~~~~iDlvlVP~vAfD~~G~RLG~GgGyYD  149 (189)
T 1sbq_A           97 RAVYPKVISD-TEIIFIDQETN------------TF--------------EPNQIDCFLIPLVGFNKDNYRLGFGKGYYD  149 (189)
T ss_dssp             EEEEEEECSS-SCEEEECTTCC------------EE--------------CGGGCCEEEEECSEECTTCCEECCSSCHHH
T ss_pred             eEEEeEEccC-CceEEEEeCCC------------CC--------------CcccCCEEEECceEECCCCCEeecCCchHH
Confidence            9999999644 45999998754            21              123579999999999999999999999999


Q ss_pred             HHHHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCC
Q 022651          230 VFLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPR  280 (294)
Q Consensus       230 RfL~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~  280 (294)
                      |||+.++.        ++.+|||+|++|+++   ||+|+||+|||+||||+
T Consensus       150 R~La~~~~--------~~~~igla~~~Q~v~---lP~e~hDiplD~IiTe~  189 (189)
T 1sbq_A          150 RYLMQLTR--------QQPKIGIAYSFQKGD---FLADPWDVQLDLIINDE  189 (189)
T ss_dssp             HHGGGCCS--------CCCEEEEECGGGBCC---CCCCTTSCCCSEEEECC
T ss_pred             HHHHhcCC--------CCCEEEEechHheeC---CCCCcccCcCCEEEcCC
Confidence            99997632        356899999999987   99999999999999995

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	294
d1soua_	194	c.124.1.6 (A:) Hypothetical protein aq_1731 {Aquif	1e-22
d1wkca_	175	c.124.1.6 (A:) Hypothetical protein TTHA1611 {Ther	4e-22
d1sbqa_	164	c.124.1.6 (A:) 5,10-methenyltetrahydrofolate synth	9e-20

>d1soua_ c.124.1.6 (A:) Hypothetical protein aq_1731 {Aquifex aeolicus [TaxId: 63363]} Length = 194

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: Hypothetical protein aq 1731
species: Aquifex aeolicus [TaxId: 63363]

 Score = 90.3 bits (223), Expect = 1e-22
 Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRI 132
           K  LR K+     N+   +R +    V   +     FK S+ +  Y       EVD + +
Sbjct: 3   KSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIK--GEVDLTPL 60

Query: 133 VSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGN 192
             E           + K+  +   + + + + + ++ +   L   +  I+EP        
Sbjct: 61  FPE-----------VLKEKELILPKVEGNEISLYRVHSPACLGVGAFGIMEP-------- 101

Query: 193 QCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVAL 252
             E      E VD + +PG+AFD  G RLG G GYYD  L          K  + L V +
Sbjct: 102 -VEGERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLL----------KRVKGLKVGV 150

Query: 253 LYSLQLVDEESIPVTPYDVPVDALVSPRGFI 283
            YS Q+ +   +P   +D+PVD LV+ +   
Sbjct: 151 AYSFQVFER--LPRDAWDIPVDVLVTEKNVR 179

>d1wkca_ c.124.1.6 (A:) Hypothetical protein TTHA1611 {Thermus thermophilus [TaxId: 274]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: Hypothetical protein TTHA1611
species: Thermus thermophilus [TaxId: 274]

 Score = 88.7 bits (219), Expect = 4e-22
 Identities = 48/214 (22%), Positives = 75/214 (35%), Gaps = 43/214 (20%)

Query: 72  KKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSR 131
            K  LR + R   + +D    S+   AV   +L     +  R+I  Y             
Sbjct: 2   TKAELRRRARAAWRRLDLKALSR---AVGAALLPWLRERGFRHILLYHPL---------- 48

Query: 132 IVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDG 191
                     + N     + Y  R        + L +     L      +          
Sbjct: 49  --------PHELNLLPLMEAYPARYYLPKVAGKGLTVHPFGPLAPGPFGL---------- 90

Query: 192 NQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVA 251
            +     +    +DL+++PGLAFDR G RLG G G+YD FLK+           +   V 
Sbjct: 91  LEPTTPPEDPRVLDLVVVPGLAFDREGYRLGHGQGFYDRFLKEV----------RAATVG 140

Query: 252 LLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPI 285
           ++    L     +P  P+DVPVD L +  G   +
Sbjct: 141 VVPQALLFPA--LPRDPWDVPVDHLATEAGVEAV 172

>d1sbqa_ c.124.1.6 (A:) 5,10-methenyltetrahydrofolate synthetase homolog MPN348 {Mycoplasma pneumoniae [TaxId: 2104]} Length = 164

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: 5,10-methenyltetrahydrofolate synthetase homolog MPN348
species: Mycoplasma pneumoniae [TaxId: 2104]

 Score = 82.2 bits (202), Expect = 9e-20
 Identities = 36/208 (17%), Positives = 70/208 (33%), Gaps = 48/208 (23%)

Query: 73  KRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLES-SWFKASRNICAYISCASLREVDTSR 131
           K +LR +I +    +  I++S  D  +   ++   +     + I  Y    +  EV    
Sbjct: 3   KNALRKQILQKRMALSTIEKSHLDQKINQKLVAFLTPKPCIKTIALYEPIKN--EVTFVD 60

Query: 132 IVSEILSNQTDGNGQMRKKLYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDG 191
              E L        ++ +   V      ++ +                            
Sbjct: 61  FFFEFL--------KINQIRAVYPKVISDTEIIF-------------------------- 86

Query: 192 NQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVFLKKYQKLAQEQKWKQPLLVA 251
              E        +D  ++P + F++   RLG G GYYD +L +          +Q   + 
Sbjct: 87  IDQETNTFEPNQIDCFLIPLVGFNKDNYRLGFGKGYYDRYLMQL--------TRQQPKIG 138

Query: 252 LLYSLQLVDEESIPVTPYDVPVDALVSP 279
           + YS Q  D       P+DV +D +++ 
Sbjct: 139 IAYSFQKGD---FLADPWDVQLDLIIND 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	294
d1soua_	194	Hypothetical protein aq_1731 {Aquifex aeolicus [Ta	100.0
d1wkca_	175	Hypothetical protein TTHA1611 {Thermus thermophilu	100.0
d1sbqa_	164	5,10-methenyltetrahydrofolate synthetase homolog M	100.0

>d1soua_ c.124.1.6 (A:) Hypothetical protein aq_1731 {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: Hypothetical protein aq 1731
species: Aquifex aeolicus [TaxId: 63363]

Probab=100.00  E-value=1.5e-53  Score=373.79  Aligned_cols=183  Identities=31%  Similarity=0.509  Sum_probs=166.5

Q ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcEE
Q 022651           72 KKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKL  151 (294)
Q Consensus        72 ~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~V  151 (294)
                      .|++||++++++|++|+++++...|..|+++|.+++.|+++++|++|+|++  +||||.+|++.+++         +|+|
T Consensus         2 ~K~~lRk~~~~~R~~ls~~~~~~~s~~i~~~l~~~~~~~~~~~I~~Y~p~~--~Evdt~~li~~l~~---------~k~v   70 (194)
T d1soua_           2 LKSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIK--GEVDLTPLFPEVLK---------EKEL   70 (194)
T ss_dssp             CHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHCHHHHHCCEEEECCCCS--SCCCCGGGHHHHHH---------HSEE
T ss_pred             CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhHHhhcCCEEEEEeccc--ccCChHHHHHHHhh---------cccc
Confidence            389999999999999999999999999999999999999999999999998  69999999999886         4689


Q ss_pred             EeeeEecCCCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchHHH
Q 022651          152 YVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVF  231 (294)
Q Consensus       152 ~vP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYDRf  231 (294)
                      +||++.++  .|.|+.|.+.++|..|.|||+||...        +. ..+..+|+|||||||||++|+||||||||||||
T Consensus        71 ~lP~i~~~--~m~~~~~~~~~~l~~~~~gI~EP~~~--------~~-~~~~~iDlilVP~lafD~~G~RlG~G~GyYDR~  139 (194)
T d1soua_          71 ILPKVEGN--EISLYRVHSPACLGVGAFGIMEPVEG--------ER-VNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRL  139 (194)
T ss_dssp             EEEEESSS--SEEEEEESSSCCCEECSSSCEECCSS--------EE-ECGGGCSEEEECCSCBCSSSCBCCSCCSSHHHH
T ss_pred             cccccchh--ceeeeccCCCcccccccccccCCCcc--------cc-ccccccceehhhHHHHhhcCCccccCCEeHHHh
Confidence            99999754  59999999999999999999999642        11 134678999999999999999999999999999


Q ss_pred             HHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCceEecCCc
Q 022651          232 LKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPISPV  288 (294)
Q Consensus       232 L~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gvi~~~~~  288 (294)
                      |+.++          +.+|||+|++|+++.  +|+|+||++||+||||+|++++...
T Consensus       140 L~~~~----------~~~igl~~~~Q~~~~--ip~e~hD~~ld~iiTe~~i~~~~~~  184 (194)
T d1soua_         140 LKRVK----------GLKVGVAYSFQVFER--LPRDAWDIPVDVLVTEKNVRRLRDG  184 (194)
T ss_dssp             HHHCC----------SEEEEECCGGGBCSC--CCCCSCCCCCSEEECSSCEEESCCC
T ss_pred             hhccC----------CCEEEEEecceecCC--CCCCCcCeECCEEEEccceEEecCC
Confidence            98753          468999999999999  9999999999999999999999764

>d1wkca_ c.124.1.6 (A:) Hypothetical protein TTHA1611 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: Hypothetical protein TTHA1611
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.8e-50  Score=348.55  Aligned_cols=172  Identities=30%  Similarity=0.515  Sum_probs=145.1

Q ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCccccCCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcEE
Q 022651           72 KKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFKASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKKL  151 (294)
Q Consensus        72 ~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~V  151 (294)
                      .|++||++++++|++++.+   +.|++|+++|+++..++.+++|++|+|++  +||||.+|++.           .||+|
T Consensus         2 ~K~~lRk~~r~~r~~l~~~---~~s~~i~~~l~~~~~~~~~~~I~~Y~p~~--~Evdt~~li~~-----------~~k~v   65 (175)
T d1wkca_           2 TKAELRRRARAAWRRLDLK---ALSRAVGAALLPWLRERGFRHILLYHPLP--HELNLLPLMEA-----------YPARY   65 (175)
T ss_dssp             CHHHHHHHHHHHHHTSCHH---HHHHHHHHHHHHHHHHHTCCEEECCCCCT--TCCCCTTHHHH-----------SCCEE
T ss_pred             CHHHHHHHHHHHHhcCCHH---HHHHHHHHHHHHHHHhcCCCEEEEEEeEC--CccCcchhhhc-----------cccee
Confidence            4899999999999999865   46788999999999999999999999998  69999999864           68999


Q ss_pred             EeeeEecCCCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchHHH
Q 022651          152 YVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDVF  231 (294)
Q Consensus       152 ~vP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYDRf  231 (294)
                      +||++.++  .|.|+.|   ++|++|.|||+||....          .+...+|+|||||||||++|+||||||||||||
T Consensus        66 ~lP~i~~~--~l~~~~~---~~l~~~~~gI~EP~~~~----------~~~~~~DliivP~vafD~~G~RlG~G~GyYDR~  130 (175)
T d1wkca_          66 YLPKVAGK--GLTVHPF---GPLAPGPFGLLEPTTPP----------EDPRVLDLVVVPGLAFDREGYRLGHGQGFYDRF  130 (175)
T ss_dssp             EEEEEETT--EEEEEES---CCBC-------CBCSCC----------BCGGGCSEEEECCSEEETTSCEECCSSCHHHHH
T ss_pred             eeeccccc--ceeecch---hhcchhhhhcccccccc----------cccccccEEEeeehheeecCcccccCcchHHHH
Confidence            99999864  4888776   47999999999997421          123568999999999999999999999999999


Q ss_pred             HHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCCceEecC
Q 022651          232 LKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPRGFIPIS  286 (294)
Q Consensus       232 L~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~gvi~~~  286 (294)
                      |+.++          +.+|||+|++|++++  +|.|+||+|||+||||+|++.+.
T Consensus       131 L~~~~----------~~~igl~~~~q~~~~--ip~e~hDi~ld~iiTe~gi~~~k  173 (175)
T d1wkca_         131 LKEVR----------AATVGVVPQALLFPA--LPRDPWDVPVDHLATEAGVEAVK  173 (175)
T ss_dssp             HHHCC----------SEEEEECCGGGEESC--CCCCTTCCCCSEEEETTEEEECC
T ss_pred             HhhcC----------CCEEEEEehhheeCC--CCCCcccccCCEEEeCcccEEec
Confidence            98753          468999999999999  99999999999999999999885

>d1sbqa_ c.124.1.6 (A:) 5,10-methenyltetrahydrofolate synthetase homolog MPN348 {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: 5,10-methenyltetrahydrofolate synthetase homolog MPN348
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=100.00  E-value=5.6e-46  Score=317.04  Aligned_cols=162  Identities=25%  Similarity=0.431  Sum_probs=138.6

Q ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCcccc-CCCeEEEEecCCCCCCCChHHHHHHHHhcCCCCCCCCCcE
Q 022651           72 KKRSLRSKIRKDLKNMDPIQRSQEDTAVQDIVLESSWFK-ASRNICAYISCASLREVDTSRIVSEILSNQTDGNGQMRKK  150 (294)
Q Consensus        72 ~K~~LRk~~~~~R~~ls~~~r~~~s~~I~~~L~~~~~~~-~a~~V~~Y~p~~~~~Evdt~~Li~~al~~~~~~~~~~GK~  150 (294)
                      .|++||++++++|++|+++++...|..|+++|.++..++ .+++|++|+|++  +||||.+++..+++.       .+++
T Consensus         2 ~K~~lR~~~~~~R~~l~~~~~~~~s~~i~~~l~~~~~~~~~~~~I~~Y~p~~--~Evd~~~l~~~~l~~-------~~~~   72 (164)
T d1sbqa_           2 DKNALRKQILQKRMALSTIEKSHLDQKINQKLVAFLTPKPCIKTIALYEPIK--NEVTFVDFFFEFLKI-------NQIR   72 (164)
T ss_dssp             CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTCTTCCEEECCCCCT--TSCCCCHHHHHHHHH-------TTCE
T ss_pred             CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhhcCEEEEEeccC--CcccchHHHHHHHHc-------CCeE
Confidence            489999999999999999999999999999998865555 458999999998  699999999888861       3458


Q ss_pred             EEeeeEecCCCceEEEEcCCCcccccccCCccCCCCCCCCCCccccccccCCCCcEEEEeceeEeCCCCeeccCCcchHH
Q 022651          151 LYVPRVEDKNSNMRMLKISAVKDLVANSMNILEPSLLDSDGNQCEDVMQASEPVDLLILPGLAFDRSGGRLGRGGGYYDV  230 (294)
Q Consensus       151 V~vP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~~~~~iDLiIVPglAFD~~G~RLG~GgGYYDR  230 (294)
                      +++|++.++. .|.|..         ..+|+.||.                 .+|+|||||||||++|+|||||||||||
T Consensus        73 ~~~P~i~~~~-~~~~~~---------~~~~~~eP~-----------------~iDliivP~lafD~~G~RLGyGgGyYDR  125 (164)
T d1sbqa_          73 AVYPKVISDT-EIIFID---------QETNTFEPN-----------------QIDCFLIPLVGFNKDNYRLGFGKGYYDR  125 (164)
T ss_dssp             EEEEEECSSS-CEEEEC---------TTCCEECGG-----------------GCCEEEEECSEECTTCCEECCSSCHHHH
T ss_pred             EEEeeccCcc-cceecc---------ccccccCCc-----------------ccCEEEeeeheeeeecCccccccChHHH
Confidence            9999997653 576654         357888884                 3699999999999999999999999999


Q ss_pred             HHHHhhhhHhhhhccCceEEEEEcccccccCCCCCCCCCcccCCEEEeCC
Q 022651          231 FLKKYQKLAQEQKWKQPLLVALLYSLQLVDEESIPVTPYDVPVDALVSPR  280 (294)
Q Consensus       231 fL~~~~~~~~~~~~~~~~~IGlaf~~Qivd~~~lP~e~hDiplD~IITe~  280 (294)
                      ||+.++.        ++.+|||||++|+++   +|.|+||++||+||||+
T Consensus       126 ~L~~~~~--------~~~~igla~~~Q~~~---~~~e~hDi~ld~iiTek  164 (164)
T d1sbqa_         126 YLMQLTR--------QQPKIGIAYSFQKGD---FLADPWDVQLDLIINDE  164 (164)
T ss_dssp             HGGGCCS--------CCCEEEEECGGGBCC---CCCCTTSCCCSEEEECC
T ss_pred             HHHhcCC--------CCCEEEEEehhhccC---CCCCcccccCCEEeCCC
Confidence            9997642        356899999999886   55699999999999995