Citrus Sinensis ID: 022657

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
MGLLQLNLALSSSTSSLSLFPDNHQTFSRTGHKNQFFGLTRRARLATSRIRCSAKVDNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSESS
ccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccEEHHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHHHHHcccEEEEccccccEEEEccccccccccccHHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHcccccEEEcccccccccccHHHHHHHHHHHHcccccc
cccEEccEEEEcccccccEccccccEEEcccccccEEEEEEcccccccEEEEEEccccccEEEEcccEEEEEEccccccccccccccEEEEcccccHHHHHHHHHHHcccccEEEEEEcHccHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHHHHHcccEEEEEEccccEEEEcccccEEccccHHHHHHHHccccccHHHHHHHHHHHHHccccEccHHHHHHHccccEEEEEcccccEEEccHHHHHHHHHHHHHHHccc
mgllqlnlalssstsslslfpdnhqtfsrtghknqffglTRRARLATSRIRcsakvdngsvvvkdKSVSVILLAggrgkrmganmpkqylpllgqpialYSFYTFSRMVEVKEIVVvcdpsysdiFEETKEKINVdlkfslpgkerqdsvysglqevdfnselvcihdsarplvlSKDVQKVLMDALRVGAAVlgvpakatikeansesfVVRTLDrktlwemqtpqvikpdlLKKGFELVnreglevtddvsivehlkhpvyitegsytnikvttpddLLIAERILNLSSESS
MGLLQLNLALSSSTSSLSLFPDNHQTfsrtghknqffglTRRARLATSRIrcsakvdngsvvvkdksvsVILLaggrgkrmgaNMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLgvpakatikeansesfvvrtldrktlwemqtpqvikpdllkKGFELVNREglevtddvsiveHLKHpvyitegsytnikvttpdDLLIAERilnlssess
MGllqlnlalssstsslslFPDNHQTFSRTGHKNQFFGLTRRARLATSRIRCSAkvdngsvvvkdksvsvILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSESS
*********************************NQFFGLTRRARLATSRIRCSAKVDNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPG****DSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN******
*******************************************************************VSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAER**NL*****
MGLLQLNLALSSSTSSLSLFPDNHQTFSRTGHKNQFFGLTRRARLATSRIRCSAKVDNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSESS
*GLLQLNLALSSSTSSLSLFPDNHQTFSRTGHKNQFFGLTRRARLATSRIRCSAKVDNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLS****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGLLQLNLALSSSTSSLSLFPDNHQTFSRTGHKNQFFGLTRRARLATSRIRCSAKVDNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSESS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query294 2.2.26 [Sep-21-2011]
P69834302 2-C-methyl-D-erythritol 4 yes no 0.976 0.950 0.68 1e-105
Q5N8G1297 2-C-methyl-D-erythritol 4 yes no 0.840 0.831 0.718 8e-97
Q6MEE8230 2-C-methyl-D-erythritol 4 yes no 0.734 0.939 0.488 2e-54
Q9Z7X5211 2-C-methyl-D-erythritol 4 yes no 0.704 0.981 0.406 2e-43
Q824I4212 2-C-methyl-D-erythritol 4 yes no 0.717 0.995 0.417 7e-42
Q5L433228 2-C-methyl-D-erythritol 4 yes no 0.731 0.942 0.433 1e-41
Q253C1212 2-C-methyl-D-erythritol 4 yes no 0.717 0.995 0.412 8e-41
Q5L6V2217 2-C-methyl-D-erythritol 4 yes no 0.727 0.986 0.411 2e-40
Q0SQB9225 2-C-methyl-D-erythritol 4 yes no 0.744 0.973 0.444 3e-40
Q8XHQ3225 2-C-methyl-D-erythritol 4 yes no 0.744 0.973 0.444 9e-40
>sp|P69834|ISPD_ARATH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabidopsis thaliana GN=ISPD PE=1 SV=1 Back     alignment and function desciption
 Score =  382 bits (980), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/300 (68%), Positives = 241/300 (80%), Gaps = 13/300 (4%)

Query: 1   MGLLQLNLALSSSTS----SLSLFPDNHQTFSRTGHKNQFFGLTRRARLATSR------I 50
           M +LQ NL   +S +     L +  +++  FS      Q    ++R   +  R      I
Sbjct: 1   MAMLQTNLGFITSPTFLCPKLKVKLNSYLWFSYRSQV-QKLDFSKRVNRSYKRDALLLSI 59

Query: 51  RCSAKV--DNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRM 108
           +CS+    DN +VVVK+KSVSVILLAGG+GKRM  +MPKQY+PLLGQPIALYSF+TFSRM
Sbjct: 60  KCSSSTGFDNSNVVVKEKSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRM 119

Query: 109 VEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHD 168
            EVKEIVVVCDP + DIFEE +E I+VDL+F++PGKERQDSVYSGLQE+D NSELVCIHD
Sbjct: 120 PEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIHD 179

Query: 169 SARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 228
           SARPLV ++DV+KVL D   VGAAVLGVPAKATIKE NS+S VV+TLDRKTLWEMQTPQV
Sbjct: 180 SARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQV 239

Query: 229 IKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 288
           IKP+LLKKGFELV  EGLEVTDDVSIVE+LKHPVY+++GSYTNIKVTTPDDLL+AERIL+
Sbjct: 240 IKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 299
Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Is essential for chloroplast development and required for pigments and gibberellins biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 6EC: 0
>sp|Q5N8G1|ISPD_ORYSJ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPD PE=2 SV=1 Back     alignment and function description
>sp|Q6MEE8|ISPD_PARUW 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) GN=ispD PE=3 SV=1 Back     alignment and function description
>sp|Q9Z7X5|ISPD_CHLPN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia pneumoniae GN=ispD PE=3 SV=1 Back     alignment and function description
>sp|Q824I4|ISPD_CHLCV 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydophila caviae (strain GPIC) GN=ispD PE=3 SV=2 Back     alignment and function description
>sp|Q5L433|ISPD_GEOKA 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Geobacillus kaustophilus (strain HTA426) GN=ispD PE=3 SV=1 Back     alignment and function description
>sp|Q253C1|ISPD_CHLFF 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=ispD PE=3 SV=1 Back     alignment and function description
>sp|Q5L6V2|ISPD_CHLAB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydophila abortus (strain S26/3) GN=ispD PE=3 SV=1 Back     alignment and function description
>sp|Q0SQB9|ISPD_CLOPS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=ispD PE=3 SV=1 Back     alignment and function description
>sp|Q8XHQ3|ISPD_CLOPE 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium perfringens (strain 13 / Type A) GN=ispD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query294
164604990311 2-C-methyl-D-erythritol 4-phosphate cyti 0.993 0.938 0.757 1e-128
164604992311 2-C-methyl-D-erythritol 4-phosphate cyti 0.931 0.881 0.777 1e-126
224129526309 predicted protein [Populus trichocarpa] 0.948 0.902 0.768 1e-120
225465292308 PREDICTED: 2-C-methyl-D-erythritol 4-pho 0.969 0.925 0.713 1e-117
189017042240 putative chloroplast 2-C-methyl-D-erythr 0.812 0.995 0.866 1e-117
343466163303 2-C-methyl-D-erythritol 4-phosphate cyti 0.904 0.877 0.759 1e-116
147856454312 hypothetical protein VITISV_013863 [Viti 0.853 0.804 0.807 1e-116
449431902304 PREDICTED: 2-C-methyl-D-erythritol 4-pho 0.867 0.838 0.773 1e-114
405789860277 putative 2-C-methyl-D-erythritol 2,4-cyc 0.843 0.895 0.843 1e-114
87201352317 4-diphosphocytidyl-2-C-methyl-D-erythrit 0.857 0.794 0.786 1e-113
>gi|164604990|dbj|BAF98291.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea brasiliensis] Back     alignment and taxonomy information
 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/305 (75%), Positives = 258/305 (84%), Gaps = 13/305 (4%)

Query: 3   LLQLNLALSSSTSSL----SLFPDNH-QTFSRTGH--------KNQFFGLTRRARLATSR 49
           LL LNL + S ++S     SLFP NH Q  + + H         ++   + +  R+AT+ 
Sbjct: 5   LLHLNLTIISPSASFKSSNSLFPCNHPQIPTNSFHLPSLSKSSVHKISWIQKLPRIATAT 64

Query: 50  IRCSAKVDNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMV 109
           I+CSAK++N S   K+KSVSVILLAGG+GKRMGA+MPKQYLPLLGQPIALYSFYTFS+M+
Sbjct: 65  IKCSAKIENSSAAAKEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSFYTFSKMI 124

Query: 110 EVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDS 169
           EVKEIVVVCDPSY DIFE+ KE INVDLKF+LPGKERQDSVYSGL EVD NSELVC+HDS
Sbjct: 125 EVKEIVVVCDPSYQDIFEDAKENINVDLKFALPGKERQDSVYSGLHEVDLNSELVCVHDS 184

Query: 170 ARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 229
           ARPLV S DV+KV+ DA   GAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI
Sbjct: 185 ARPLVSSADVKKVIEDAWINGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 244

Query: 230 KPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNL 289
           KPDLLKKGFELVNR+GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLL+AERILNL
Sbjct: 245 KPDLLKKGFELVNRDGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLLAERILNL 304

Query: 290 SSESS 294
           +SE S
Sbjct: 305 NSEES 309

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|164604992|dbj|BAF98292.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|224129526|ref|XP_002328738.1| predicted protein [Populus trichocarpa] gi|222839036|gb|EEE77387.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225465292|ref|XP_002268908.1| PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic [Vitis vinifera] gi|297739442|emb|CBI29624.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|189017042|gb|ACD70398.1| putative chloroplast 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|343466163|gb|AEM42975.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Siraitia grosvenorii] Back     alignment and taxonomy information
>gi|147856454|emb|CAN80766.1| hypothetical protein VITISV_013863 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449431902|ref|XP_004133739.1| PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|405789860|gb|AFS28673.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, partial [Olea europaea] Back     alignment and taxonomy information
>gi|87201352|gb|ABB88837.2| 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase [Stevia rebaudiana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query294
TAIR|locus:2065264302 ISPD [Arabidopsis thaliana (ta 0.751 0.731 0.809 7e-93
TIGR_CMR|BA_0084226 BA_0084 "2-C-methyl-D-erythrit 0.748 0.973 0.388 5.8e-34
TIGR_CMR|DET_0059227 DET_0059 "2-C-methyl-D-erythri 0.721 0.933 0.383 4.2e-31
TIGR_CMR|CHY_2342233 CHY_2342 "2-C-methyl-D-erythri 0.714 0.901 0.328 9.1e-29
TIGR_CMR|SO_3438249 SO_3438 "4-diphosphocytidyl-2C 0.731 0.863 0.353 8.2e-28
TIGR_CMR|GSU_3368232 GSU_3368 "4-diphosphocytidyl-2 0.721 0.913 0.343 5.2e-26
TIGR_CMR|CPS_1072243 CPS_1072 "2-C-methyl-D-erythri 0.758 0.917 0.311 1.6e-24
UNIPROTKB|Q46893236 ispD "4-diphosphocytidyl-2C-me 0.714 0.889 0.330 6.8e-24
UNIPROTKB|Q9KUJ2232 ispD "2-C-methyl-D-erythritol 0.741 0.939 0.323 1.1e-23
TIGR_CMR|VC_0528232 VC_0528 "4-diphosphocytidyl-2C 0.741 0.939 0.323 1.1e-23
TAIR|locus:2065264 ISPD [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
 Identities = 179/221 (80%), Positives = 202/221 (91%)

Query:    71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
             ILLAGG+GKRM  +MPKQY+PLLGQPIALYSF+TFSRM EVKEIVVVCDP + DIFEE +
Sbjct:    82 ILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYE 141

Query:   131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG 190
             E I+VDL+F++PGKERQDSVYSGLQE+D NSELVCIHDSARPLV ++DV+KVL D   VG
Sbjct:   142 ESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVG 201

Query:   191 AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTD 250
             AAVLGVPAKATIKE NS+S VV+TLDRKTLWEMQTPQVIKP+LLKKGFELV  EGLEVTD
Sbjct:   202 AAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTD 261

Query:   251 DVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSS 291
             DVSIVE+LKHPVY+++GSYTNIKVTTPDDLL+AERIL+  S
Sbjct:   262 DVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSEDS 302
GO:0003824 "catalytic activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0008299 "isoprenoid biosynthetic process" evidence=IEA
GO:0009536 "plastid" evidence=NAS
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA;TAS
GO:0050518 "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
TIGR_CMR|BA_0084 BA_0084 "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0059 DET_0059 "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2342 CHY_2342 "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|SO_3438 SO_3438 "4-diphosphocytidyl-2C-methyl-D-erythritol synthase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3368 GSU_3368 "4-diphosphocytidyl-2C-methyl-D-erythritol synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1072 CPS_1072 "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q46893 ispD "4-diphosphocytidyl-2C-methyl-D-erythritol synthetase monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KUJ2 ispD "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0528 VC_0528 "4-diphosphocytidyl-2C-methyl-D-erythritol synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P69834ISPD_ARATH2, ., 7, ., 7, ., 6, 00.680.97610.9503yesno
Q5N8G1ISPD_ORYSJ2, ., 7, ., 7, ., 6, 00.71880.84010.8316yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.70.976
4th Layer2.7.7.600.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query294
PLN02728252 PLN02728, PLN02728, 2-C-methyl-D-erythritol 4-phos 1e-169
cd02516218 cd02516, CDP-ME_synthetase, CDP-ME synthetase is i 1e-88
PRK00155227 PRK00155, ispD, 2-C-methyl-D-erythritol 4-phosphat 7e-86
COG1211230 COG1211, IspD, 4-diphosphocytidyl-2-methyl-D-erith 5e-77
TIGR00453217 TIGR00453, ispD, 2-C-methyl-D-erythritol 4-phospha 9e-76
pfam01128221 pfam01128, IspD, Uncharacterized protein family UP 7e-54
PRK13385230 PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phos 1e-43
PRK09382 378 PRK09382, ispDF, bifunctional 2-C-methyl-D-erythri 2e-37
cd04182186 cd04182, GT_2_like_f, GT_2_like_f is a subfamily o 3e-06
COG1213239 COG1213, COG1213, Predicted sugar nucleotidyltrans 3e-06
pfam12804178 pfam12804, NTP_transf_3, MobA-like NTP transferase 6e-06
cd04189236 cd04189, G1P_TT_long, G1P_TT_long represents the l 2e-05
COG1208 358 COG1208, GCD1, Nucleoside-diphosphate-sugar pyroph 1e-04
COG1209286 COG1209, RfbA, dTDP-glucose pyrophosphorylase [Cel 2e-04
cd04181217 cd04181, NTP_transferase, NTP_transferases catalyz 2e-04
TIGR01208 353 TIGR01208, rmlA_long, glucose-1-phosphate thymidyl 2e-04
cd02503181 cd02503, MobA, MobA catalyzes the formation of mol 5e-04
PRK00317193 PRK00317, mobA, molybdopterin-guanine dinucleotide 0.002
pfam00483247 pfam00483, NTP_transferase, Nucleotidyl transferas 0.002
TIGR03310188 TIGR03310, matur_ygfJ, molybdenum hydroxylase acce 0.003
PRK14358 481 PRK14358, glmU, bifunctional N-acetylglucosamine-1 0.003
>gnl|CDD|215387 PLN02728, PLN02728, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information 
 Score =  468 bits (1206), Expect = e-169
 Identities = 198/249 (79%), Positives = 216/249 (86%)

Query: 44  RLATSRIRCSAKVDNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFY 103
              TS    SA  D  S VVK+KSVSVILLAGG GKRMGANMPKQYLPLLGQPIALYS Y
Sbjct: 1   SRLTSTALASAADDETSAVVKEKSVSVILLAGGVGKRMGANMPKQYLPLLGQPIALYSLY 60

Query: 104 TFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSEL 163
           TF+RM EVKEIVVVCDPSY D+FEE  E I+V LKF+LPGKERQDSV++GLQEVD NSEL
Sbjct: 61  TFARMPEVKEIVVVCDPSYRDVFEEAVENIDVPLKFALPGKERQDSVFNGLQEVDANSEL 120

Query: 164 VCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEM 223
           VCIHDSARPLV S D++KVL DA   GAAVLGVP KATIKEANS+SFVV+TLDRK LWEM
Sbjct: 121 VCIHDSARPLVTSADIEKVLKDAAVHGAAVLGVPVKATIKEANSDSFVVKTLDRKRLWEM 180

Query: 224 QTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIA 283
           QTPQVIKP+LL++GFELV REGLEVTDDVSIVE LKHPV+ITEGSYTNIKVTTPDD+L+A
Sbjct: 181 QTPQVIKPELLRRGFELVEREGLEVTDDVSIVEALKHPVFITEGSYTNIKVTTPDDMLVA 240

Query: 284 ERILNLSSE 292
           ERILN  S+
Sbjct: 241 ERILNERSD 249

Length = 252
>gnl|CDD|133009 cd02516, CDP-ME_synthetase, CDP-ME synthetase is involved in mevalonate-independent isoprenoid production Back     alignment and domain information
>gnl|CDD|234670 PRK00155, ispD, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|224132 COG1211, IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213532 TIGR00453, ispD, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>gnl|CDD|216314 pfam01128, IspD, Uncharacterized protein family UPF0007 Back     alignment and domain information
>gnl|CDD|184017 PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236492 PRK09382, ispDF, bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional Back     alignment and domain information
>gnl|CDD|133025 cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function Back     alignment and domain information
>gnl|CDD|224134 COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|221780 pfam12804, NTP_transf_3, MobA-like NTP transferase domain Back     alignment and domain information
>gnl|CDD|133032 cd04189, G1P_TT_long, G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>gnl|CDD|224129 COG1208, GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|224130 COG1209, RfbA, dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|133024 cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars Back     alignment and domain information
>gnl|CDD|233311 TIGR01208, rmlA_long, glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>gnl|CDD|133000 cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide Back     alignment and domain information
>gnl|CDD|234725 PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed Back     alignment and domain information
>gnl|CDD|215940 pfam00483, NTP_transferase, Nucleotidyl transferase Back     alignment and domain information
>gnl|CDD|234166 TIGR03310, matur_ygfJ, molybdenum hydroxylase accessory protein, YgfJ family Back     alignment and domain information
>gnl|CDD|237688 PRK14358, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 294
PF01128221 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly 100.0
PLN02728252 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 100.0
COG1211230 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt 100.0
PRK13385230 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 100.0
PRK00155227 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 100.0
TIGR00453217 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 100.0
cd02516218 CDP-ME_synthetase CDP-ME synthetase is involved in 100.0
PRK09382 378 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp 100.0
COG2068199 Uncharacterized MobA-related protein [General func 99.94
COG1207 460 GlmU N-acetylglucosamine-1-phosphate uridyltransfe 99.92
cd02517239 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th 99.91
PRK13368238 3-deoxy-manno-octulosonate cytidylyltransferase; P 99.91
PRK14353 446 glmU bifunctional N-acetylglucosamine-1-phosphate 99.91
PRK14356 456 glmU bifunctional N-acetylglucosamine-1-phosphate 99.91
PRK05450245 3-deoxy-manno-octulosonate cytidylyltransferase; P 99.9
cd02513223 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- 99.9
PRK00317193 mobA molybdopterin-guanine dinucleotide biosynthes 99.9
cd04182186 GT_2_like_f GT_2_like_f is a subfamily of the glyc 99.9
cd02540229 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU 99.9
PRK02726200 molybdopterin-guanine dinucleotide biosynthesis pr 99.9
TIGR00466238 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe 99.9
COG1209286 RfbA dTDP-glucose pyrophosphorylase [Cell envelope 99.9
PRK14354 458 glmU bifunctional N-acetylglucosamine-1-phosphate 99.89
TIGR03310188 matur_ygfJ molybdenum hydroxylase accessory protei 99.89
TIGR03202190 pucB xanthine dehydrogenase accessory protein pucB 99.89
PLN02917293 CMP-KDO synthetase 99.89
PRK14359 430 glmU bifunctional N-acetylglucosamine-1-phosphate 99.89
TIGR01173 451 glmU UDP-N-acetylglucosamine diphosphorylase/gluco 99.89
TIGR03584222 PseF pseudaminic acid CMP-transferase. The sequenc 99.89
TIGR02665186 molyb_mobA molybdopterin-guanine dinucleotide bios 99.89
PRK14352 482 glmU bifunctional N-acetylglucosamine-1-phosphate 99.88
cd02503181 MobA MobA catalyzes the formation of molybdopterin 99.88
PRK14360 450 glmU bifunctional N-acetylglucosamine-1-phosphate 99.88
PRK14355 459 glmU bifunctional N-acetylglucosamine-1-phosphate 99.87
cd02538240 G1P_TT_short G1P_TT_short is the short form of glu 99.86
COG1213239 Predicted sugar nucleotidyltransferases [Cell enve 99.86
PRK15480292 glucose-1-phosphate thymidylyltransferase RfbA; Pr 99.86
PRK00560196 molybdopterin-guanine dinucleotide biosynthesis pr 99.86
cd02518233 GT2_SpsF SpsF is a glycosyltrnasferase implicated 99.85
PRK14489 366 putative bifunctional molybdopterin-guanine dinucl 99.85
PRK14358 481 glmU bifunctional N-acetylglucosamine-1-phosphate 99.85
TIGR01207286 rmlA glucose-1-phosphate thymidylyltransferase, sh 99.85
TIGR01105297 galF UTP-glucose-1-phosphate uridylyltransferase, 99.85
cd06915223 NTP_transferase_WcbM_like WcbM_like is a subfamily 99.84
PF00483248 NTP_transferase: Nucleotidyl transferase This Pros 99.84
PRK14490369 putative bifunctional molybdopterin-guanine dinucl 99.84
PRK09451 456 glmU bifunctional N-acetylglucosamine-1-phosphate 99.83
TIGR01208 353 rmlA_long glucose-1-phosphate thymidylylransferase 99.83
COG0746192 MobA Molybdopterin-guanine dinucleotide biosynthes 99.83
cd04189236 G1P_TT_long G1P_TT_long represents the long form o 99.83
COG1083228 NeuA CMP-N-acetylneuraminic acid synthetase [Cell 99.82
cd02541267 UGPase_prokaryotic Prokaryotic UGPase catalyses th 99.82
TIGR00454183 conserved hypothetical protein TIGR00454. At this 99.82
COG2266177 GTP:adenosylcobinamide-phosphate guanylyltransfera 99.82
COG1212247 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase 99.82
cd06422221 NTP_transferase_like_1 NTP_transferase_like_1 is a 99.82
PRK05293 380 glgC glucose-1-phosphate adenylyltransferase; Prov 99.82
COG1208 358 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas 99.81
TIGR01099260 galU UTP-glucose-1-phosphate uridylyltransferase. 99.81
cd02524253 G1P_cytidylyltransferase G1P_cytidylyltransferase 99.81
PRK10122297 GalU regulator GalF; Provisional 99.81
PF12804160 NTP_transf_3: MobA-like NTP transferase domain; PD 99.8
TIGR02623254 G1P_cyt_trans glucose-1-phosphate cytidylyltransfe 99.8
cd06425233 M1P_guanylylT_B_like_N N-terminal domain of the M1 99.8
cd06426220 NTP_transferase_like_2 NTP_trnasferase_like_2 is a 99.79
PRK14357 448 glmU bifunctional N-acetylglucosamine-1-phosphate 99.79
PRK00844 407 glgC glucose-1-phosphate adenylyltransferase; Prov 99.78
cd02523229 PC_cytidylyltransferase Phosphocholine cytidylyltr 99.78
PRK13389302 UTP--glucose-1-phosphate uridylyltransferase subun 99.78
PRK14500346 putative bifunctional molybdopterin-guanine dinucl 99.78
cd04183231 GT2_BcE_like GT2_BcbE_like is likely involved in t 99.77
cd06428257 M1P_guanylylT_A_like_N N-terminal domain of M1P_gu 99.77
PRK02862 429 glgC glucose-1-phosphate adenylyltransferase; Prov 99.75
TIGR02092 369 glgD glucose-1-phosphate adenylyltransferase, GlgD 99.75
PRK00725 425 glgC glucose-1-phosphate adenylyltransferase; Prov 99.75
TIGR02091361 glgC glucose-1-phosphate adenylyltransferase. This 99.74
PLN02241 436 glucose-1-phosphate adenylyltransferase 99.73
cd04181217 NTP_transferase NTP_transferases catalyze the tran 99.7
cd02508200 ADP_Glucose_PP ADP-glucose pyrophosphorylase is in 99.7
cd02509274 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf 99.69
KOG1322 371 consensus GDP-mannose pyrophosphorylase/mannose-1- 99.64
COG1210291 GalU UDP-glucose pyrophosphorylase [Cell envelope 99.58
TIGR01479 468 GMP_PMI mannose-1-phosphate guanylyltransferase/ma 99.58
cd04198214 eIF-2B_gamma_N The N-terminal domain of gamma subu 99.55
COG4750231 LicC CTP:phosphocholine cytidylyltransferase invol 99.53
COG1861241 SpsF Spore coat polysaccharide biosynthesis protei 99.53
PRK00576178 molybdopterin-guanine dinucleotide biosynthesis pr 99.52
PF02348217 CTP_transf_3: Cytidylyltransferase; InterPro: IPR0 99.51
cd04197217 eIF-2B_epsilon_N The N-terminal domain of epsilon 99.46
PRK15460 478 cpsB mannose-1-phosphate guanyltransferase; Provis 99.35
COG0836333 {ManC} Mannose-1-phosphate guanylyltransferase [Ce 99.34
cd02507216 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma 99.31
TIGR03552195 F420_cofC 2-phospho-L-lactate guanylyltransferase 99.21
COG0448 393 GlgC ADP-glucose pyrophosphorylase [Carbohydrate t 99.15
KOG1460 407 consensus GDP-mannose pyrophosphorylase [Carbohydr 99.11
KOG1462 433 consensus Translation initiation factor 2B, gamma 98.95
cd04180266 UGPase_euk_like Eukaryotic UGPase-like includes UD 98.63
cd04193323 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala 98.44
PTZ00339 482 UDP-N-acetylglucosamine pyrophosphorylase; Provisi 98.36
PF01983217 CofC: Guanylyl transferase CofC like; InterPro: IP 98.02
COG1920210 Predicted nucleotidyltransferase, CobY/MobA/RfbA f 97.91
cd00897300 UGPase_euk Eukaryotic UGPase catalyses the synthes 97.73
cd06424315 UGGPase UGGPase catalyzes the synthesis of UDP-Glu 97.62
KOG1461 673 consensus Translation initiation factor 2B, epsilo 97.37
PLN02474 469 UTP--glucose-1-phosphate uridylyltransferase 97.29
PLN02435 493 probable UDP-N-acetylglucosamine pyrophosphorylase 97.28
PF01704 420 UDPGP: UTP--glucose-1-phosphate uridylyltransferas 97.19
PLN02830 615 UDP-sugar pyrophosphorylase 97.0
COG4284 472 UDP-glucose pyrophosphorylase [Carbohydrate transp 96.96
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 95.33
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 95.05
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 95.04
KOG2388 477 consensus UDP-N-acetylglucosamine pyrophosphorylas 94.17
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 94.13
cd06438183 EpsO_like EpsO protein participates in the methano 93.71
PF09837122 DUF2064: Uncharacterized protein conserved in bact 93.53
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 93.33
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 93.18
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 93.02
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 92.74
PRK10714 325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 92.65
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 92.4
COG3222211 Uncharacterized protein conserved in bacteria [Fun 92.21
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 92.21
PRK10073 328 putative glycosyl transferase; Provisional 92.2
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 91.88
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 91.74
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 91.34
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 90.89
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 90.3
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 89.91
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 89.69
cd06423180 CESA_like CESA_like is the cellulose synthase supe 89.68
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 89.44
COG1216305 Predicted glycosyltransferases [General function p 89.25
PRK11204 420 N-glycosyltransferase; Provisional 89.11
cd04188211 DPG_synthase DPG_synthase is involved in protein N 89.1
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 88.87
COG1215 439 Glycosyltransferases, probably involved in cell wa 88.86
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 88.73
cd06442224 DPM1_like DPM1_like represents putative enzymes si 88.11
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 87.95
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 87.83
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 87.81
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 87.8
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 87.64
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 87.2
TIGR03469 384 HonB hopene-associated glycosyltransferase HpnB. T 87.03
TIGR03472 373 HpnI hopanoid biosynthesis associated glycosyl tra 86.47
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 86.22
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 86.18
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 85.84
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 85.77
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 85.67
PRK14583 444 hmsR N-glycosyltransferase; Provisional 85.01
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 84.49
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 84.21
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 82.43
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 81.28
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 80.08
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] Back     alignment and domain information 
Probab=100.00  E-value=6.3e-42  Score=300.95  Aligned_cols=220  Identities=43%  Similarity=0.677  Sum_probs=192.0

Q ss_pred             eeEEEEeCCCCCCCCCCCCceeeeeCCeehHHHHHHHHhccCCCCeEEEEcCCCchHHHHHHHhhcCCceEEeCCCCcHH
Q 022657           68 VSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQ  147 (294)
Q Consensus        68 i~aIILAaG~gsRmg~~~pK~Ll~l~GkpLl~~~i~~l~~~~~i~~IvVv~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~  147 (294)
                      +.+||||||.|+|||.++||++++++|+|+|.|++++|.+++.+++|+||+.+++.+.+++.+.+  ..+.++.+|.++.
T Consensus         1 V~aIilAaG~G~R~g~~~pKQf~~l~Gkpvl~~tl~~f~~~~~i~~Ivvv~~~~~~~~~~~~~~~--~~v~iv~GG~tR~   78 (221)
T PF01128_consen    1 VAAIILAAGSGSRMGSGIPKQFLELGGKPVLEYTLEAFLASPEIDEIVVVVPPEDIDYVEELLSK--KKVKIVEGGATRQ   78 (221)
T ss_dssp             EEEEEEESS-STCCTSSS-GGGSEETTEEHHHHHHHHHHTTTTESEEEEEESGGGHHHHHHHHHH--TTEEEEE--SSHH
T ss_pred             CEEEEeCCccchhcCcCCCCeeeEECCeEeHHHHHHHHhcCCCCCeEEEEecchhHHHHHHhhcC--CCEEEecCChhHH
Confidence            57999999999999988999999999999999999999999999999999999887777777666  5678889999999


Q ss_pred             HHHHHHHHhcccCCCeEEEecCCCCCCCHHHHHHHHHHHHh-cCcEEEEEEcccceEEeCCCCcEEEeccccceeeccCC
Q 022657          148 DSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR-VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTP  226 (294)
Q Consensus       148 ~sv~~al~~~~~~~~~vlv~~~D~Pli~~~~i~~ll~~~~~-~~~~i~~~~~~~~~~~~~~~G~v~~~~~~~~l~~~~tP  226 (294)
                      +|+++||..+..+.++|++||+.+||++++.+.++++...+ +++++++.|+.++++.++++|.+.++++|++++.+|||
T Consensus        79 ~SV~ngL~~l~~~~d~VlIHDaaRPfv~~~~i~~~i~~~~~~~~aai~~~p~~DTik~v~~~~~v~~tldR~~l~~~QTP  158 (221)
T PF01128_consen   79 ESVYNGLKALAEDCDIVLIHDAARPFVSPELIDRVIEAAREGHGAAIPALPVTDTIKRVDDDGFVTETLDRSKLWAVQTP  158 (221)
T ss_dssp             HHHHHHHHCHHCTSSEEEEEETTSTT--HHHHHHHHHHHHHTCSEEEEEEE-SSEEEEESTTSBEEEEETGGGEEEEEEE
T ss_pred             HHHHHHHHHHHcCCCEEEEEccccCCCCHHHHHHHHHHHHhhcCcEEEEEeccccEEEEecCCcccccCCHHHeeeecCC
Confidence            99999999998666899999999999999999999999988 89999999999999999888999999999999999999


Q ss_pred             ceeChHHHHHHHHhhhhCCcccccHHHHHHhCCCCEEEEecCCceecCCCHHHHHHHHHHHhh
Q 022657          227 QVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNL  289 (294)
Q Consensus       227 ~~f~~~~l~~~~~~~~~~g~~~td~~~~l~~~g~~v~~v~~~~~~idVdTpeDL~~ae~~l~~  289 (294)
                      |+|+++.+.++++.....+..+||+.++++..|.++.+++++..+++|+|||||+.||.++++
T Consensus       159 Q~F~~~~l~~a~~~a~~~~~~~tDdasl~~~~g~~v~~V~G~~~N~KIT~peDl~~ae~ll~~  221 (221)
T PF01128_consen  159 QAFRFELLLEAYEKADEEGFEFTDDASLVEAAGKKVAIVEGSPRNIKITTPEDLELAEALLKQ  221 (221)
T ss_dssp             EEEEHHHHHHHHHTHHHHTHHHSSHHHHHHHTTS-EEEEE--TTG----SHHHHHHHHHHHHH
T ss_pred             CeecHHHHHHHHHHHHhcCCCccCHHHHHHHcCCCEEEEeCCCCceeECCHHHHHHHHHHhcC
Confidence            999999999999987666788999999999999999999999999999999999999999864

The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] Back     alignment and domain information
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed Back     alignment and domain information
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production Back     alignment and domain information
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional Back     alignment and domain information
>COG2068 Uncharacterized MobA-related protein [General function prediction only] Back     alignment and domain information
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide Back     alignment and domain information
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety Back     alignment and domain information
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed Back     alignment and domain information
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function Back     alignment and domain information
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU Back     alignment and domain information
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase Back     alignment and domain information
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family Back     alignment and domain information
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB Back     alignment and domain information
>PLN02917 CMP-KDO synthetase Back     alignment and domain information
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase Back     alignment and domain information
>TIGR03584 PseF pseudaminic acid CMP-transferase Back     alignment and domain information
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial Back     alignment and domain information
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide Back     alignment and domain information
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional Back     alignment and domain information
>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat Back     alignment and domain information
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional Back     alignment and domain information
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form Back     alignment and domain information
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit Back     alignment and domain information
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases Back     alignment and domain information
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry Back     alignment and domain information
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional Back     alignment and domain information
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] Back     alignment and domain information
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>COG1083 NeuA CMP-N-acetylneuraminic acid synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose Back     alignment and domain information
>TIGR00454 conserved hypothetical protein TIGR00454 Back     alignment and domain information
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family Back     alignment and domain information
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose Back     alignment and domain information
>PRK10122 GalU regulator GalF; Provisional Back     alignment and domain information
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B Back     alignment and domain information
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase Back     alignment and domain information
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins Back     alignment and domain information
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family Back     alignment and domain information
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline Back     alignment and domain information
>PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional Back     alignment and domain information
>PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional Back     alignment and domain information
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule Back     alignment and domain information
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase Back     alignment and domain information
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit Back     alignment and domain information
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>PLN02241 glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars Back     alignment and domain information
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch Back     alignment and domain information
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose Back     alignment and domain information
>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Back     alignment and domain information
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG1861 SpsF Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK00576 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>PF02348 CTP_transf_3: Cytidylyltransferase; InterPro: IPR003329 Synonym(s): CMP-N-acetylneuraminic acid synthetase Acylneuraminate cytidylyltransferase (2 Back     alignment and domain information
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity Back     alignment and domain information
>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC Back     alignment and domain information
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1462 consensus Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>PF01983 CofC: Guanylyl transferase CofC like; InterPro: IPR002835 Coenzyme F 420 is a hydride carrier cofactor functioning in methanogenesis Back     alignment and domain information
>COG1920 Predicted nucleotidyltransferase, CobY/MobA/RfbA family [General function prediction only] Back     alignment and domain information
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>KOG1461 consensus Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02474 UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information
>PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 Back     alignment and domain information
>PLN02830 UDP-sugar pyrophosphorylase Back     alignment and domain information
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>PF09837 DUF2064: Uncharacterized protein conserved in bacteria (DUF2064); InterPro: IPR018641 This entry contains proteins that have no known function Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>COG3222 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query294
1w77_A228 2c-methyl-d-erythritol 4-phosphate Cytidylyltransfe 1e-104
2yc3_A228 Inhibitors Of The Herbicidal Target Ispd Length = 2 1e-104
2ycm_A227 Inhibitors Of Herbicidal Target Ispd Length = 227 1e-104
1vgt_A238 Crystal Structure Of 4-Diphosphocytidyl-2c-Methyl-D 4e-24
3n9w_A235 Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phos 4e-24
1h3m_A235 Structure Of 4-Diphosphocytidyl-2c-Methyl-D-Erythri 4e-24
1i52_A236 Crystal Structure Of 4-Diphosphocytidyl-2-C-Methyle 4e-24
2xwl_A223 Crystal Structure Of Ispd From Mycobacterium Smegma 1e-20
1vpa_A234 Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phos 4e-20
2px7_A236 Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phos 8e-20
1vgz_A241 Crystal Structure Of 4-Diphosphocytidyl-2c-Methyl-D 5e-18
1vgw_A231 Crystal Structure Of 4-Diphosphocytidyl-2c-Methyl-D 5e-18
3f1c_A246 Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phos 2e-17
2vsh_A236 Synthesis Of Cdp-Activated Ribitol For Teichoic Aci 3e-15
2xwn_A233 Crystal Structure Of Ispd From Mycobacterium Tuberc 4e-15
3okr_A231 Structure Of Mtb Apo 2-C-Methyl-D-Erythritol 4-Phos 6e-15
3q7u_A231 Structure Of Mtb 2-C-Methyl-D-Erythritol 4-Phosphat 7e-15
1w55_A 371 Structure Of The Bifunctional Ispdf From Campylobac 6e-14
>pdb|1W77|A Chain A, 2c-methyl-d-erythritol 4-phosphate Cytidylyltransferase (ispd) From Arabidopsis Thaliana Length = 228 Back     alignment and structure 
Iteration: 1

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/221 (80%), Positives = 202/221 (91%)
Query: 71  ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
           ILLAGG+GKRM  +MPKQY+PLLGQPIALYSF+TFSRM EVKEIVVVCDP + DIFEE +
Sbjct: 8   ILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYE 67
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG 190
           E I+VDL+F++PGKERQDSVYSGLQE+D NSELVCIHDSARPLV ++DV+KVL D   VG
Sbjct: 68  ESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVG 127
Query: 191 AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTD 250
           AAVLGVPAKATIKE NS+S VV+TLDRKTLWEMQTPQVIKP+LLKKGFELV  EGLEVTD
Sbjct: 128 AAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTD 187
Query: 251 DVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSS 291
           DVSIVE+LKHPVY+++GSYTNIKVTTPDDLL+AERIL+  S
Sbjct: 188 DVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSEDS 228
>pdb|2YC3|A Chain A, Inhibitors Of The Herbicidal Target Ispd Length = 228 Back     alignment and structure
>pdb|2YCM|A Chain A, Inhibitors Of Herbicidal Target Ispd Length = 227 Back     alignment and structure
>pdb|1VGT|A Chain A, Crystal Structure Of 4-Diphosphocytidyl-2c-Methyl-D-Erythritol Synthase Length = 238 Back     alignment and structure
>pdb|3N9W|A Chain A, Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase (Ispd) In Complex With 1,2-Propanediol Length = 235 Back     alignment and structure
>pdb|1H3M|A Chain A, Structure Of 4-Diphosphocytidyl-2c-Methyl-D-Erythritol Synthetase Length = 235 Back     alignment and structure
>pdb|1I52|A Chain A, Crystal Structure Of 4-Diphosphocytidyl-2-C-Methylerythritol (Cdp-Me) Synthase (Ygbp) Involved In Mevalonate Independent Isoprenoid Biosynthesis Length = 236 Back     alignment and structure
>pdb|2XWL|A Chain A, Crystal Structure Of Ispd From Mycobacterium Smegmatis In Complex With Ctp And Mg Length = 223 Back     alignment and structure
>pdb|1VPA|A Chain A, Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase (Tm1393) From Thermotoga Maritima At 2.67 A Resolution Length = 234 Back     alignment and structure
>pdb|2PX7|A Chain A, Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase From Thermus Thermophilus Hb8 Length = 236 Back     alignment and structure
>pdb|1VGZ|A Chain A, Crystal Structure Of 4-Diphosphocytidyl-2c-Methyl-D-Erythritol Synthase Length = 241 Back     alignment and structure
>pdb|1VGW|A Chain A, Crystal Structure Of 4-Diphosphocytidyl-2c-Methyl-D-Erythritol Synthase Length = 231 Back     alignment and structure
>pdb|3F1C|A Chain A, Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase From Listeria Monocytogenes Length = 246 Back     alignment and structure
>pdb|2VSH|A Chain A, Synthesis Of Cdp-Activated Ribitol For Teichoic Acid Precursors In Streptococcus Pneumoniae Length = 236 Back     alignment and structure
>pdb|2XWN|A Chain A, Crystal Structure Of Ispd From Mycobacterium Tuberculosis In Complex With Ctp And Mg Length = 233 Back     alignment and structure
>pdb|3OKR|A Chain A, Structure Of Mtb Apo 2-C-Methyl-D-Erythritol 4-Phosphate Cytidyltransferase (Ispd) Length = 231 Back     alignment and structure
>pdb|3Q7U|A Chain A, Structure Of Mtb 2-C-Methyl-D-Erythritol 4-Phosphate Cytidyltransferase (Ispd) Complexed With Ctp Length = 231 Back     alignment and structure
>pdb|1W55|A Chain A, Structure Of The Bifunctional Ispdf From Campylobacter Jejuni Length = 371 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query294
2yc3_A228 2-C-methyl-D-erythritol 4-phosphate cytidylyltran 1e-108
1i52_A236 4-diphosphocytidyl-2-C-methylerythritol synthase; 1e-96
3f1c_A246 Putative 2-C-methyl-D-erythritol 4-phosphate cytid 1e-95
2xwl_A223 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 2e-95
2px7_A236 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 5e-95
3q80_A231 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; 5e-95
2vsh_A236 TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly 1e-94
1vpa_A234 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 4e-91
1vgw_A231 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; 4e-90
1w55_A 371 ISPD/ISPF bifunctional enzyme; biosynthetic pathwa 1e-58
2waw_A199 MOBA relate protein; unknown function; HET: PGE; 1 9e-09
1jyk_A254 LICC protein, CTP:phosphocholine cytidylytransfera 8e-08
2wee_A197 MOBA-related protein; unknown function; 1.65A {Myc 3e-07
3d5n_A197 Q97W15_sulso; NESG, SSR125, structural genomics, P 3e-07
3rsb_A196 Adenosylcobinamide-phosphate guanylyltransferase; 3e-06
2e8b_A201 Probable molybdopterin-guanine dinucleotide biosy 8e-06
2dpw_A232 Hypothetical protein TTHA0179; transferase, struct 8e-06
2ggo_A 401 401AA long hypothetical glucose-1-phosphate thymid 8e-06
3ngw_A208 Molybdopterin-guanine dinucleotide biosynthesis P 2e-05
4evw_A255 Nucleoside-diphosphate-sugar pyrophosphorylase; st 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
1e5k_A201 Molybdopterin-guanine dinucleotide biosynthesis pr 1e-04
2xme_A232 CTP-inositol-1-phosphate cytidylyltransferase; CDP 5e-04
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* Length = 228 Back     alignment and structure
 Score =  311 bits (799), Expect = e-108
 Identities = 184/227 (81%), Positives = 207/227 (91%)

Query: 65  DKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSD 124
           +KSVSVILLAGG+GKRM  +MPKQY+PLLGQPIALYSF+TFSRM EVKEIVVVCDP + D
Sbjct: 2   EKSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRD 61

Query: 125 IFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM 184
           IFEE +E I+VDL F++PGKERQDSVYSGLQE+D NSELVCIHDSARPLV ++DV+KVL 
Sbjct: 62  IFEEYEESIDVDLSFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLK 121

Query: 185 DALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRE 244
           D   VGAAVLGVPAKATIKE NS+S VV+TLDRKTLWEMQTPQVIKP+LLKKGFELV  E
Sbjct: 122 DGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSE 181

Query: 245 GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSS 291
           GLEVTDDVSIVE+LKHPVY+++GSYTNIKVTTPDDLL+AERIL+  S
Sbjct: 182 GLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSEDS 228
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A Length = 236 Back     alignment and structure
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} Length = 246 Back     alignment and structure
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* Length = 223 Back     alignment and structure
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} Length = 236 Back     alignment and structure
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} PDB: 3q7u_A* 3okr_A 2xwn_A* Length = 231 Back     alignment and structure
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* Length = 236 Back     alignment and structure
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 Length = 234 Back     alignment and structure
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A Length = 231 Back     alignment and structure
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* Length = 371 Back     alignment and structure
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} Length = 199 Back     alignment and structure
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* Length = 254 Back     alignment and structure
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A Length = 197 Back     alignment and structure
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} Length = 197 Back     alignment and structure
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} Length = 196 Back     alignment and structure
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} Length = 201 Back     alignment and structure
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 Length = 232 Back     alignment and structure
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Length = 401 Back     alignment and structure
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} Length = 208 Back     alignment and structure
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} Length = 255 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* Length = 201 Back     alignment and structure
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* Length = 232 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query294
3q80_A231 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; 100.0
3f1c_A246 Putative 2-C-methyl-D-erythritol 4-phosphate cytid 100.0
2yc3_A228 2-C-methyl-D-erythritol 4-phosphate cytidylyltran 100.0
1i52_A236 4-diphosphocytidyl-2-C-methylerythritol synthase; 100.0
1vgw_A231 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; 100.0
2xwl_A223 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 100.0
1vpa_A234 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 100.0
2vsh_A236 TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly 100.0
2px7_A236 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 99.97
1w55_A 371 ISPD/ISPF bifunctional enzyme; biosynthetic pathwa 99.95
1h7e_A245 3-deoxy-manno-octulosonate cytidylyltransferase; n 99.95
4fce_A 459 Bifunctional protein GLMU; GLMU. csgid, niaid, str 99.95
3k8d_A264 3-deoxy-manno-octulosonate cytidylyltransferase; K 99.94
3tqd_A256 3-deoxy-manno-octulosonate cytidylyltransferase; c 99.94
2waw_A199 MOBA relate protein; unknown function; HET: PGE; 1 99.94
4fcu_A253 3-deoxy-manno-octulosonate cytidylyltransferase; s 99.94
1ezi_A228 CMP-N-acetylneuraminic acid synthetase; homodimer, 99.94
3oam_A252 3-deoxy-manno-octulosonate cytidylyltransferase; c 99.94
2wee_A197 MOBA-related protein; unknown function; 1.65A {Myc 99.94
2v0h_A 456 Bifunctional protein GLMU; cell WALL, magnesium, c 99.93
2y6p_A234 3-deoxy-manno-octulosonate cytidylyltransferase; l 99.93
1hm9_A 468 GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr 99.92
4ecm_A269 Glucose-1-phosphate thymidylyltransferase; HET: DA 99.91
1vic_A262 3-deoxy-manno-octulosonate cytidylyltransferase; s 99.91
3d5n_A197 Q97W15_sulso; NESG, SSR125, structural genomics, P 99.91
1fxo_A293 Glucose-1-phosphate thymidylyltransferase; rhamnos 99.91
1lvw_A295 Glucose-1-phosphate thymidylyltransferase; protein 99.91
3juk_A281 UDP-glucose pyrophosphorylase (GALU); transfer; HE 99.9
3ngw_A208 Molybdopterin-guanine dinucleotide biosynthesis P 99.9
3pnn_A303 Conserved domain protein; structural genomics, PSI 99.9
1e5k_A201 Molybdopterin-guanine dinucleotide biosynthesis pr 99.9
1qwj_A229 Cytidine monophospho-N-acetylneuraminic acid synth 99.89
3rsb_A196 Adenosylcobinamide-phosphate guanylyltransferase; 99.89
2pa4_A323 UTP-glucose-1-phosphate uridylyltransferase; phosp 99.88
3st8_A 501 Bifunctional protein GLMU; acetyltransferase, pyro 99.88
1mc3_A296 Glucose-1-phosphate thymidylyltransferase; glucose 99.88
2ux8_A297 Glucose-1-phosphate uridylyltransferase; UGPG, GAL 99.88
1tzf_A259 Glucose-1-phosphate cytidylyltransferase; nucleoti 99.86
2e3d_A302 UTP--glucose-1-phosphate uridylyltransferase; UDP- 99.85
1jyk_A254 LICC protein, CTP:phosphocholine cytidylytransfera 99.85
4evw_A255 Nucleoside-diphosphate-sugar pyrophosphorylase; st 99.85
2e8b_A201 Probable molybdopterin-guanine dinucleotide biosy 99.85
2qh5_A308 PMI, ALGA, mannose-6-phosphate isomerase; structur 99.84
2dpw_A232 Hypothetical protein TTHA0179; transferase, struct 99.84
2ggo_A 401 401AA long hypothetical glucose-1-phosphate thymid 99.83
2xme_A232 CTP-inositol-1-phosphate cytidylyltransferase; CDP 99.82
3brk_X 420 Glucose-1-phosphate adenylyltransferase; ADP-gluco 99.82
1yp2_A 451 Glucose-1-phosphate adenylyltransferase small subu 99.8
2x65_A336 Mannose-1-phosphate guanylyltransferase; nucleotid 99.77
2cu2_A337 Putative mannose-1-phosphate guanylyl transferase; 99.76
2i5e_A211 Hypothetical protein MM_2497; APC86122, methanosar 99.24
2i5k_A 488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 98.98
2icy_A 469 Probable UTP-glucose-1-phosphate uridylyltransfera 98.8
1jv1_A 505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 98.73
3cgx_A242 Putative nucleotide-diphospho-sugar transferase; Y 98.53
3oc9_A 405 UDP-N-acetylglucosamine pyrophosphorylase; structu 98.44
2oeg_A 505 UTP-glucose-1-phosphate uridylyltransferase 2, put 98.43
2yqc_A 486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 98.29
3r3i_A 528 UTP--glucose-1-phosphate uridylyltransferase; ross 97.65
3ogz_A 630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 97.51
3gue_A 484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 97.31
3bcv_A240 Putative glycosyltransferase protein; protein stru 95.26
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 94.05
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 92.96
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 92.69
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 90.12
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 87.13
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 87.06
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 83.89
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 83.52
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 83.01
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* Back     alignment and structure
Probab=100.00  E-value=2.7e-39  Score=286.05  Aligned_cols=219  Identities=29%  Similarity=0.370  Sum_probs=192.8

Q ss_pred             ceeEEEEeCCCCCCCCCCCCceeeeeCCeehHHHHHHHHhccCCCCeEEEEcCCCchHHHHHHHhhcCCceEEeCCCCcH
Q 022657           67 SVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKER  146 (294)
Q Consensus        67 ~i~aIILAaG~gsRmg~~~pK~Ll~l~GkpLl~~~i~~l~~~~~i~~IvVv~~~~~~~~~~~~~~~~~~~i~~v~~~~~~  146 (294)
                      ++.+||||||.|+|||.+.||+|++++|+|||+|+++++.+++.+++|+||++++..+.+++.+..   .+.++.++.++
T Consensus         7 ~~~aIIlAaG~g~Rmg~~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~---~v~~v~gg~~r   83 (231)
T 3q80_A            7 EVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH---RAMIVAGGSNR   83 (231)
T ss_dssp             CEEEEEECCCCCTTTCSSSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG---GCEEEECCSSH
T ss_pred             ceEEEEECCCCCccCCCCCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC---CeEEEcCCCch
Confidence            478999999999999988899999999999999999999987679999999998765555555433   45677778889


Q ss_pred             HHHHHHHHHhcccC--CCeEEEecCCCCCCCHHHHHHHHHHHHh-cCcEEEEEEcccceEEeCCCCcEEEeccccceeec
Q 022657          147 QDSVYSGLQEVDFN--SELVCIHDSARPLVLSKDVQKVLMDALR-VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEM  223 (294)
Q Consensus       147 ~~sv~~al~~~~~~--~~~vlv~~~D~Pli~~~~i~~ll~~~~~-~~~~i~~~~~~~~~~~~~~~G~v~~~~~~~~l~~~  223 (294)
                      .+|+++|+..+.+.  .++|+++++|+||+++++|+++++.+.+ .+++++++|+.+++++++++|.+.++++|+.++.+
T Consensus        84 ~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~~i~~~p~~dt~~~~~~~g~v~~~~~r~~l~~~  163 (231)
T 3q80_A           84 TDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAV  163 (231)
T ss_dssp             HHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHTTCSEEEEEECCSSCEEEECTTSBEEECCCGGGEEEE
T ss_pred             HHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhhcCCeEEEEEeccCCEEEEcCCCcEEEecchhheEEE
Confidence            99999999998743  5899999999999999999999999887 68889999999999988878999999999999999


Q ss_pred             cCCceeChHHHHHHHHhhhh--CCcccccHHHHHHhCCCCEEEEecCCceecCCCHHHHHHHHHHHh
Q 022657          224 QTPQVIKPDLLKKGFELVNR--EGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN  288 (294)
Q Consensus       224 ~tP~~f~~~~l~~~~~~~~~--~g~~~td~~~~l~~~g~~v~~v~~~~~~idVdTpeDL~~ae~~l~  288 (294)
                      ||||+|+.+.+.++++....  .++++||+.++++..|.++..++++..+++|+||+||..||++++
T Consensus       164 qTPq~F~~~~L~~a~~~~~~~n~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l~  230 (231)
T 3q80_A          164 QTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR  230 (231)
T ss_dssp             CSCEEEEHHHHHHHHHHHTC-----CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHHH
T ss_pred             cCCcEEEHHHHHHHHHHHHhhcCCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHhc
Confidence            99999999999999886543  358899999999999999999999989999999999999999985
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 Back     alignment and structure
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* Back     alignment and structure
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A Back     alignment and structure
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A Back     alignment and structure
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* Back     alignment and structure
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 Back     alignment and structure
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* Back     alignment and structure
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} Back     alignment and structure
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* Back     alignment and structure
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* Back     alignment and structure
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* Back     alignment and structure
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* Back     alignment and structure
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 Back     alignment and structure
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} Back     alignment and structure
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A Back     alignment and structure
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A Back     alignment and structure
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 Back     alignment and structure
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A Back     alignment and structure
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* Back     alignment and structure
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* Back     alignment and structure
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* Back     alignment and structure
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* Back     alignment and structure
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} Back     alignment and structure
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... Back     alignment and structure
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 Back     alignment and structure
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* Back     alignment and structure
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} Back     alignment and structure
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} Back     alignment and structure
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* Back     alignment and structure
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 Back     alignment and structure
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} Back     alignment and structure
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* Back     alignment and structure
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 Back     alignment and structure
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} Back     alignment and structure
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* Back     alignment and structure
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} Back     alignment and structure
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* Back     alignment and structure
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} Back     alignment and structure
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} Back     alignment and structure
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} Back     alignment and structure
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 Back     alignment and structure
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Back     alignment and structure
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* Back     alignment and structure
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} Back     alignment and structure
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* Back     alignment and structure
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* Back     alignment and structure
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 Back     alignment and structure
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21 Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Back     alignment and structure
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Back     alignment and structure
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Back     alignment and structure
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Back     alignment and structure
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Back     alignment and structure
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Back     alignment and structure
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 294
d1w77a1226 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl- 2e-51
d1i52a_225 c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt 2e-41
d1vgwa_226 c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt 6e-41
d1vpaa_221 c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt 1e-36
d1w55a1205 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, 1e-33
d2oi6a2248 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate 2e-12
d1g97a2250 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate 1e-10
d2dpwa1231 c.68.1.19 (A:1-231) Uncharacterized protein TTHA01 2e-10
d1lvwa_295 c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacteri 7e-09
d1mc3a_291 c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} 5e-08
d1jyka_229 c.68.1.13 (A:) CTP:phosphocholine cytidylytransfer 3e-07
d1fxoa_292 c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa 5e-07
d1e5ka_188 c.68.1.8 (A:) Molybdenum cofactor biosynthesis pro 1e-06
d1tzfa_259 c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransf 6e-06
d1yp2a2307 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltr 6e-06
d2cu2a2268 c.68.1.20 (A:1-268) Putative mannose-1-phosphate g 1e-04
d2icya2378 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 0.004
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 226 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP)
species: Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]

 Score =  166 bits (421), Expect = 2e-51
 Identities = 183/224 (81%), Positives = 207/224 (92%)

Query: 65  DKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSD 124
           +KSVSVILLAGG+GKRM  +MPKQY+PLLGQPIALYSF+TFSRM EVKEIVVVCDP + D
Sbjct: 2   EKSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRD 61

Query: 125 IFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM 184
           IFEE +E I+VDL+F++PGKERQDSVYSGLQE+D NSELVCIHDSARPLV ++DV+KVL 
Sbjct: 62  IFEEYEESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLK 121

Query: 185 DALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRE 244
           D   VGAAVLGVPAKATIKE NS+S VV+TLDRKTLWEMQTPQVIKP+LLKKGFELV  E
Sbjct: 122 DGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSE 181

Query: 245 GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 288
           GLEVTDDVSIVE+LKHPVY+++GSYTNIKVTTPDDLL+AERIL+
Sbjct: 182 GLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 225
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Length = 225 Back     information, alignment and structure
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} Length = 226 Back     information, alignment and structure
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} Length = 221 Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Length = 205 Back     information, alignment and structure
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 248 Back     information, alignment and structure
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Length = 250 Back     information, alignment and structure
>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} Length = 231 Back     information, alignment and structure
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 295 Back     information, alignment and structure
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} Length = 291 Back     information, alignment and structure
>d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} Length = 229 Back     information, alignment and structure
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 292 Back     information, alignment and structure
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} Length = 188 Back     information, alignment and structure
>d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} Length = 259 Back     information, alignment and structure
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 307 Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Length = 268 Back     information, alignment and structure
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 378 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query294
d1w77a1226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 100.0
d1w55a1205 IspD/IspF bifunctional enzyme, CDP-me synthase dom 100.0
d1vgwa_226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 100.0
d1i52a_225 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 100.0
d1vpaa_221 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 100.0
d2oi6a2248 N-acetylglucosamine 1-phosphate uridyltransferase 99.93
d1g97a2250 N-acetylglucosamine 1-phosphate uridyltransferase 99.92
d1e5ka_188 Molybdenum cofactor biosynthesis protein MobA {Esc 99.89
d2dpwa1231 Uncharacterized protein TTHA0179 {Thermus thermoph 99.86
d1fxoa_292 RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} 99.86
d1jyka_229 CTP:phosphocholine cytidylytransferase LicC {Strep 99.86
d1mc3a_291 RffH {Escherichia coli [TaxId: 562]} 99.85
d1lvwa_295 RmlA (RfbA) {Archaeon Methanobacterium thermoautot 99.83
d1h7ea_245 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 99.82
d1qwja_228 CMP acylneuraminate synthetase {Mouse (Mus musculu 99.8
d1yp2a2307 Glucose-1-phosphate adenylyltransferase small subu 99.8
d1vica_255 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 99.8
d1eyra_225 CMP acylneuraminate synthetase {Neisseria meningit 99.8
d1vh1a_246 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 99.79
d1tzfa_259 Glucose-1-phosphate cytidylyltransferase RfbF {Sal 99.79
d2cu2a2268 Putative mannose-1-phosphate guanylyl transferase 99.72
d2i5ea1208 Hypothetical protein MM2497 {Methanosarcina mazei 98.04
d2icya2378 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 97.87
d1jv1a_ 501 UDP-N-acetylglucosamine pyrophosphorylase {Human ( 97.24
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 95.32
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 90.55
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 86.28
d2bo4a1 381 Mannosylglycerate synthase, MGS {Rhodothermus mari 83.25
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP)
species: Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]

Probab=100.00  E-value=5.8e-38  Score=273.60  Aligned_cols=224  Identities=82%  Similarity=1.224  Sum_probs=184.4

Q ss_pred             CceeEEEEeCCCCCCCCCCCCceeeeeCCeehHHHHHHHHhccCCCCeEEEEcCCCchHHHHHHHhhcCCceEEeCCCCc
Q 022657           66 KSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKE  145 (294)
Q Consensus        66 ~~i~aIILAaG~gsRmg~~~pK~Ll~l~GkpLl~~~i~~l~~~~~i~~IvVv~~~~~~~~~~~~~~~~~~~i~~v~~~~~  145 (294)
                      .++++||||||+||||+.+.||+|++++|+|||+|+++.+.+++.+++|+||+++...+.++++...++.++.++.+|.+
T Consensus         3 k~i~~IIlAaG~GtRm~~~~pK~l~~l~Gkpli~~~l~~~~~~~~~~~Iivv~~~~~~~~~~~~~~~~~~~~~~~~gg~~   82 (226)
T d1w77a1           3 KSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKE   82 (226)
T ss_dssp             TCEEEEEECCC-------CCCTTTSEETTEEHHHHHHHHHHTCTTEEEEEEECCGGGTHHHHTTTTSCSSEEEEECCCSS
T ss_pred             CceEEEEeCCccCccCcCCCCceeeEECCeeHHHHHHHHHHhhccccceeeccchhhhhhhhccccccccccccccccch
Confidence            45899999999999999889999999999999999999999887899999999876556666655555667788888889


Q ss_pred             HHHHHHHHHHhcccCCCeEEEecCCCCCCCHHHHHHHHHHHHhcCcEEEEEEcccceEEeCCCCcEEEeccccceeeccC
Q 022657          146 RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQT  225 (294)
Q Consensus       146 ~~~sv~~al~~~~~~~~~vlv~~~D~Pli~~~~i~~ll~~~~~~~~~i~~~~~~~~~~~~~~~G~v~~~~~~~~l~~~~t  225 (294)
                      +++|++.|+..+..+.++|+++|+|+||++++++..+++....+++++++.+..++......++.....+++..++..++
T Consensus        83 r~~sv~~~l~~~~~~~~~Vli~d~~~P~i~~~~i~~l~~~~~~~~~~i~~~~~~d~~~~~~~~~~~~~~~~r~~~~~~~~  162 (226)
T d1w77a1          83 RQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQT  162 (226)
T ss_dssp             HHHHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHSEEEEEEECCSCCCCBCTTSCBC------CCEEEEE
T ss_pred             hhhhhhhhHhhhccccccceecccccccccHHHhhhhhhhhhccCceeeccccccceEEEccCCceeecccchhhhHHHH
Confidence            99999999999876678999999999999999999999998888888888888887765555666667788888999999


Q ss_pred             CceeChHHHHHHHHhhhhCCcccccHHHHHHhCCCCEEEEecCCceecCCCHHHHHHHHHHHhh
Q 022657          226 PQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNL  289 (294)
Q Consensus       226 P~~f~~~~l~~~~~~~~~~g~~~td~~~~l~~~g~~v~~v~~~~~~idVdTpeDL~~ae~~l~~  289 (294)
                      |+.|....+.++++.....++++||+.++++..|.++.+++++...++|||||||+.||++|++
T Consensus       163 p~~f~~~~l~~~~~~~~~~~~~~TD~~~l~~~~g~~v~~v~g~~~n~KItt~eDl~~ae~lL~~  226 (226)
T d1w77a1         163 PQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE  226 (226)
T ss_dssp             EEEECHHHHHHHHHHHHHSCCCCCC-CCTTGGGSSCCEEEECCTTCCCCCSHHHHHHHHHHHHC
T ss_pred             HHhHhhHHHHHHHHHHHhcCCCcCcHHHHHHHCCCceEEEECChhhcCcCCHHHHHHHHHHhCc
Confidence            9999999999988877777788999888888889999999999889999999999999999864
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} Back     information, alignment and structure
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]} Back     information, alignment and structure
>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1vica_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1vh1a_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KdsB [TaxId: 562]} Back     information, alignment and structure
>d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2i5ea1 c.68.1.21 (A:1-208) Hypothetical protein MM2497 {Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure