Citrus Sinensis ID: 022738

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
Protein Sequence
MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVSSSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEEDDYESERIRIREPLIHQQPIAHSDIWSSRIREKYGLNGGGEQYTFGNNPSASMKSK
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mqrncchiSFAFILKFLNFLQGFIGVSIILYSIWMLdqwnhhvpvpplpplaptpdtsvsssslslflnsdttqsrvlshdhrrlttstgpldvmvsgfddvsglgfdfnsfelpapwfiySFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDrrwekdlpfdptgeldslrsFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVStrrtnfdeeddyeseririreplihqqpiahsdiwssrirekyglngggeqytfgnnpsasmksk
Flexible Loop (DISEMBL)
MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVSSSSLSLFLNSDTtqsrvlshdhrrlttstgpldvMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAmvstrrtnfdeeddyeseririreplihqqpiahsdiwsSRIREKYGLngggeqytfgnnpsasmksk
Low Complexity Region (SEG)
MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHvpvpplpplaptpDTsvsssslslflnsDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITvvivqalslllaiilraMVSTRRTNFDEEDDYESERIRIREPLIHQQPIAHSDIWSSRIREKYGLNGGGEQYTFGNNPSASMKSK
Disordered region (IsUnstruct)
***NCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPV********************************************GPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNF*********RIRIREPLIHQQPIAHSDIWSSRIREKYGLN*******************
Disordered Region (DISOPRED)
****CCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWN*************************************LSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEEDDYESE************************REKYGLNGG*****************
Disordered Region (DISEMBL)
MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAP***********SLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTN********SERIRIREPLIHQQPIAHSDIWSSRIREKYGLNGGGEQYTFGNN********
Disordered Region (DISPRO)
**RNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVP**********************************SHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTR*****EEDDYESERIRIREP*I*******SDIWSSR*****GLNGGGEQYTFG*N********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVSSSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEEDDYESERIRIREPLIHQQPIAHSDIWSSRIREKYGLNGGGEQYTFGNNPSASMKSK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	293	2.2.26 [Sep-21-2011]
Q93XY5	270	Tetraspanin-18 OS=Arabido	yes	no	0.863	0.937	0.570	2e-73
Q9SVU4	281	Tetraspanin-20 OS=Arabido	no	no	0.894	0.932	0.578	3e-67
Q940P5	221	Tetraspanin-19 OS=Arabido	no	no	0.549	0.728	0.360	3e-30

>sp|Q93XY5|TET18_ARATH Tetraspanin-18 OS=Arabidopsis thaliana GN=At2g20230 PE=2 SV=1

 Score =  276 bits (705), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 161/282 (57%), Positives = 196/282 (69%), Gaps = 29/282 (10%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M+RNCCH+SFA  LK LNF+Q FIGVSII+YSIWML +++ H+PV P P  + +  T ++
Sbjct: 1   MRRNCCHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIA 60

Query: 61  SSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSG--LGFDFNSFELPAPW 118
           +S      N                     P+D + S     +G   GF+  S +LPAPW
Sbjct: 61  TSVSEPLKN---------------------PIDFVASIILGSNGGDHGFNLRSLDLPAPW 99

Query: 119 FIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEK 178
           FIYSFM VGILVC +  IG IAAEAI+GCCLCFY+ILK +L LLEAALVA+IAIDR WEK
Sbjct: 100 FIYSFMAVGILVCIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEK 159

Query: 179 DLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEED 238
           DLP+DPTGEL SLR+FIE+N+DICKWVGI VV VQ LSLLLA++LRAMVST +   DEE+
Sbjct: 160 DLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEE 219

Query: 239 DYESERIRIREPLI----HQQPIAHSDI--WSSRIREKYGLN 274
           D E+ R R  +PL+    +Q P   S I  WSSRIREKYGLN
Sbjct: 220 DDENPRSRTWDPLLGPQGNQAPAGSSKIENWSSRIREKYGLN 261

May be involved in the regulation of cell differentiation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SVU4|TET20_ARATH Tetraspanin-20 OS=Arabidopsis thaliana GN=At4g28770 PE=2 SV=1

 Score =  255 bits (651), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 163/282 (57%), Positives = 198/282 (70%), Gaps = 20/282 (7%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M+ NCCH+SFA ILK LNFLQ FIG+SII+YSIWMLDQ+NHHVPV P P   P   +  S
Sbjct: 1   MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDS 60

Query: 61  SSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSG---LGFDFNSFELPAP 117
           S S S  +    + S  L +          P+D  VSG    SG    GF+  S +LPAP
Sbjct: 61  SYSFSNSIIEINSVSDSLKN----------PID-FVSGIVLGSGGGDSGFNLRSLDLPAP 109

Query: 118 WFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWE 177
           WFIY FM +GILVC + +IG IAAEAI+GCCLCFY+ILK +L ++EAALV FI IDR WE
Sbjct: 110 WFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWE 169

Query: 178 KDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEE 237
           KDLP+DPTGEL+SLR+FIE+N+DICKWVGI VV +Q LSLLLA++LRAMVS R++  D+E
Sbjct: 170 KDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDE 229

Query: 238 DDYESERIRIREPLIHQQPIAHS------DIWSSRIREKYGL 273
           DD+E+   R R+ L+  Q    S      D W SRIREKYGL
Sbjct: 230 DDFENPMSRARDNLLGPQANQTSSGSSNIDNWRSRIREKYGL 271

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q940P5|TET19_ARATH Tetraspanin-19 OS=Arabidopsis thaliana GN=At2g20740 PE=2 SV=1

 Score =  132 bits (333), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 101/169 (59%), Gaps = 8/169 (4%)

Query: 109 FNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVA 168
           F   + P PWFIYSF+G+G ++C +   G IAAE ++GCCL  Y    ++L ++E  +VA
Sbjct: 47  FADSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVA 106

Query: 169 FIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVS 228
            I ++R W+KD P DP+G       FIE N  ICKW+G+++V VQ LS+L+A++L+A+  
Sbjct: 107 DIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGP 166

Query: 229 TRRTNFDEEDDYESERIRIRE------PLIHQQPI--AHSDIWSSRIRE 269
               ++D +D+Y    + + +      P +  +P+  A    W+ R+ +
Sbjct: 167 HPHRHYDSDDEYNVSTVALLQDARQPPPYVVGEPMYGAKPGAWTVRLMK 215

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	293
118483316	281	unknown [Populus trichocarpa]	0.941	0.982	0.617	2e-86
224065502	281	predicted protein [Populus trichocarpa]	0.941	0.982	0.617	2e-86
297836220	270	hypothetical protein ARALYDRAFT_480447 [	0.863	0.937	0.570	4e-79
297744265	274	unnamed protein product [Vitis vinifera]	0.877	0.937	0.580	5e-77
388519487	249	unknown [Medicago truncatula]	0.795	0.935	0.529	1e-75
217073278	249	unknown [Medicago truncatula]	0.795	0.935	0.529	2e-75
449517824	280	PREDICTED: uncharacterized LOC101206480	0.935	0.978	0.569	2e-73
449468604	280	PREDICTED: uncharacterized protein LOC10	0.935	0.978	0.566	3e-73
18399283	270	Tetraspanin family protein [Arabidopsis	0.863	0.937	0.570	1e-71
255560279	225	conserved hypothetical protein [Ricinus	0.723	0.942	0.630	3e-70

>gi|118483316|gb|ABK93560.1| unknown [Populus trichocarpa]

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 184/298 (61%), Positives = 217/298 (72%), Gaps = 22/298 (7%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M+RNCCH+  AF+LK LNFLQ FIG+SII+YS WMLDQWN+ VPV P    +P    S S
Sbjct: 1   MERNCCHVPLAFVLKLLNFLQAFIGISIIIYSFWMLDQWNNKVPVFPPSAPSPDSSFSSS 60

Query: 61  SSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFI 120
           S  L     S + +  V S               +V  F++  GL FD NSF+LPAPWFI
Sbjct: 61  SLLLLPGSESHSIRDLVFSD--------------VVPRFEN--GLDFDLNSFQLPAPWFI 104

Query: 121 YSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDL 180
           YSFMGVG+++CCI  IGCIAAE+I+GCCLCFY ILKI+  LLEAALVAFIAIDRRWEKDL
Sbjct: 105 YSFMGVGVILCCITFIGCIAAESINGCCLCFYTILKIVFILLEAALVAFIAIDRRWEKDL 164

Query: 181 PFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEEDDY 240
           PFDPTGEL SLR F+E+NVDICKWVGITV+I+QAL+LLLA+ILRAMVSTRR  FD EDD+
Sbjct: 165 PFDPTGELQSLRIFVEENVDICKWVGITVLIIQALALLLAMILRAMVSTRRNEFD-EDDF 223

Query: 241 ESERIRIREPLIHQ-----QPIAHSDIWSSRIREKYGLNGGGEQYTFGNNPSASMKSK 293
           E+ R R REPL++Q      P  HSDIW+SR+REKYGL+ G +      N S S KSK
Sbjct: 224 ENVRGRTREPLLNQSGQTFSPGTHSDIWTSRMREKYGLSTGDKPNLLNKNASMSTKSK 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065502|ref|XP_002301831.1| predicted protein [Populus trichocarpa] gi|118482993|gb|ABK93408.1| unknown [Populus trichocarpa] gi|222843557|gb|EEE81104.1| predicted protein [Populus trichocarpa]

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 184/298 (61%), Positives = 217/298 (72%), Gaps = 22/298 (7%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M+RNCCH+  AF+LK LNFLQ FIG+SII+YS WMLDQWN+ VPV P    +P    S S
Sbjct: 1   MERNCCHVPLAFVLKLLNFLQAFIGISIIIYSFWMLDQWNNKVPVFPPSAPSPDSSFSSS 60

Query: 61  SSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFI 120
           S  L     S + +  V S               +V  F++  GL FD NSF+LPAPWFI
Sbjct: 61  SLLLLPGSESHSIRDLVFSD--------------VVPRFEN--GLDFDLNSFQLPAPWFI 104

Query: 121 YSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDL 180
           YSFMGVG+++CCI  IGCIAAE+I+GCCLCFY ILKI+  LLEAALVAFIAIDRRWEKDL
Sbjct: 105 YSFMGVGVILCCITFIGCIAAESINGCCLCFYTILKIVFILLEAALVAFIAIDRRWEKDL 164

Query: 181 PFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEEDDY 240
           PFDPTGEL SLR F+E+NVDICKWVGITV+I+QAL+LLLA+ILRAMVSTRR  FD EDD+
Sbjct: 165 PFDPTGELQSLRIFVEENVDICKWVGITVLIIQALALLLAMILRAMVSTRRNEFD-EDDF 223

Query: 241 ESERIRIREPLIHQ-----QPIAHSDIWSSRIREKYGLNGGGEQYTFGNNPSASMKSK 293
           E+ R R REPL++Q      P  HSDIW+SR+REKYGL+ G +      N S S KSK
Sbjct: 224 ENVRGRTREPLLNQSGQTFSPGTHSDIWTSRMREKYGLSTGDKPNLLNQNASMSTKSK 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836220|ref|XP_002885992.1| hypothetical protein ARALYDRAFT_480447 [Arabidopsis lyrata subsp. lyrata] gi|297331832|gb|EFH62251.1| hypothetical protein ARALYDRAFT_480447 [Arabidopsis lyrata subsp. lyrata]

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 161/282 (57%), Positives = 196/282 (69%), Gaps = 29/282 (10%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M+RNCCH+SFA  LK LN +Q FIGVSII+YSIWML ++N H+PV P P  + +  T ++
Sbjct: 1   MRRNCCHVSFASTLKILNCVQAFIGVSIIIYSIWMLHEYNRHLPVDPPPAASSSSGTEIA 60

Query: 61  SSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSG--LGFDFNSFELPAPW 118
           +S      N                     P++ M S     +G   GF+  S +LPAPW
Sbjct: 61  TSISEPLKN---------------------PIEFMASIVLGSNGGDHGFNLRSLDLPAPW 99

Query: 119 FIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEK 178
           FIYSFM VGILVC +  IG IAAEAI+GCCLCFY+ILK +L LLEAALVA+IAIDR WEK
Sbjct: 100 FIYSFMAVGILVCIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEK 159

Query: 179 DLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEED 238
           DLP+DPTGEL SLR+FIE+N+DICKWVGI VV VQ LSLLLA++LRAMVST +   DEE+
Sbjct: 160 DLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEE 219

Query: 239 DYESERIRIREPLI----HQQPIAHSDI--WSSRIREKYGLN 274
           DYE+ R R  +PL+    +Q P   S I  WSSRIRE+YGLN
Sbjct: 220 DYENPRSRTWDPLLGSQGNQAPAGSSKIENWSSRIRERYGLN 261

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744265|emb|CBI37235.3| unnamed protein product [Vitis vinifera]

 Score =  293 bits (751), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 166/286 (58%), Positives = 197/286 (68%), Gaps = 29/286 (10%)

Query: 3   RNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVSSS 62
           RN CH S AF+LK LNFLQ FIG+SII YS+WML+QWNH +         P+P      S
Sbjct: 2   RNRCHSSLAFLLKVLNFLQTFIGISIIFYSLWMLNQWNHQI-------PVPSPPAPSPDS 54

Query: 63  SLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYS 122
           S   FL SDT  +RV          +      MVSG DD +GL   F   +LPAPWFIYS
Sbjct: 55  SQFPFLMSDT--ARVPEDKINPFAFAAD----MVSGSDD-NGLVLQF--IKLPAPWFIYS 105

Query: 123 FMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDLPF 182
           FMGVGI+VCCI  IG IAAEAI+GCCLCFY +L ++L LLEA L+AF+A D  WEKDLPF
Sbjct: 106 FMGVGIVVCCITCIGHIAAEAINGCCLCFYTMLTVLLILLEAGLIAFVAFDHHWEKDLPF 165

Query: 183 DPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEEDDYES 242
           DPTGEL++ RSFIE N+DICKWVGITVV +QALSLLLA+ILRAMVSTR+T++D EDDY +
Sbjct: 166 DPTGELENFRSFIEGNIDICKWVGITVVSIQALSLLLAMILRAMVSTRKTDYDIEDDYTA 225

Query: 243 ERIRIREPLIHQQPI------------AHSDIWSSRIREKYGLNGG 276
              R REPL++ Q              A+ + WSSR+REKYGLN G
Sbjct: 226 AG-RNREPLLNPQASQTSGSSKGDGKGAYLETWSSRMREKYGLNRG 270

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519487|gb|AFK47805.1| unknown [Medicago truncatula]

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/291 (52%), Positives = 189/291 (64%), Gaps = 58/291 (19%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M+ +CCH S AF+LKFLNFLQ F+G+SI+LYSIWML+QW+H  P PPLP L+ +   S S
Sbjct: 1   MRLHCCHFSLAFLLKFLNFLQAFVGLSILLYSIWMLNQWDHFTPQPPLPHLSLSLPRSFS 60

Query: 61  SSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFI 120
               S                                          D N   LPAPWFI
Sbjct: 61  PQFTS------------------------------------------DIN---LPAPWFI 75

Query: 121 YSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDL 180
           Y+FM VGILVCCIA  GCIAAE I+GCCLCFY +L  +L LLEAALVAFIAIDR+W++DL
Sbjct: 76  YAFMCVGILVCCIAFFGCIAAEIINGCCLCFYTVLITVLVLLEAALVAFIAIDRQWQEDL 135

Query: 181 PFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEEDDY 240
           P DPTG+L S+RSFIED+ DI +WVGI V++VQALSLL+A+ILRA VSTRR +FD+E++Y
Sbjct: 136 PVDPTGQLASIRSFIEDDQDISRWVGIAVLVVQALSLLVALILRATVSTRRADFDDEEEY 195

Query: 241 ESERIRIREPLIHQQPIAH------------SDIWSSRIREKYGLNGGGEQ 279
           +  R R REPL++ Q                SD+WSSR+REKYGLN G + 
Sbjct: 196 DV-RGRSREPLLNHQSGQTSGISKGDIRGNLSDVWSSRMREKYGLNNGDKH 245

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073278|gb|ACJ84998.1| unknown [Medicago truncatula]

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 154/291 (52%), Positives = 188/291 (64%), Gaps = 58/291 (19%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M+ +CC  S AF+LKFLNFLQ F+G+SI+LYSIWML+QW+H  P PPLP L+ +   S S
Sbjct: 1   MRLHCCRFSLAFLLKFLNFLQAFVGLSILLYSIWMLNQWDHFTPQPPLPHLSLSLPRSFS 60

Query: 61  SSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFI 120
               S                                          D N   LPAPWFI
Sbjct: 61  PQFTS------------------------------------------DIN---LPAPWFI 75

Query: 121 YSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEKDL 180
           Y+FM VGILVCCIA  GCIAAE I+GCCLCFY +L  +L LLEAALVAFIAIDR+W++DL
Sbjct: 76  YAFMCVGILVCCIAFFGCIAAEIINGCCLCFYTVLITVLVLLEAALVAFIAIDRQWQEDL 135

Query: 181 PFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEEDDY 240
           P DPTG+L S+RSFIEDN DI +WVGI V++VQALSLL+A+ILRA VSTRR +FD+E++Y
Sbjct: 136 PVDPTGQLASIRSFIEDNQDISRWVGIAVLVVQALSLLVALILRATVSTRRADFDDEEEY 195

Query: 241 ESERIRIREPLIHQQPIAH------------SDIWSSRIREKYGLNGGGEQ 279
           +  R R REPL++ Q                SD+WSSR+REKYGLN G + 
Sbjct: 196 DV-RGRSREPLLNHQSGQTSGISKGDIRGNLSDVWSSRMREKYGLNNGDKH 245

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517824|ref|XP_004165944.1| PREDICTED: uncharacterized LOC101206480 [Cucumis sativus]

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 167/293 (56%), Positives = 206/293 (70%), Gaps = 19/293 (6%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M R CCH+S AFILK  NFLQ F+GVSII+YS WMLD+WNHHVPV P PP+      S +
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALA-PSPA 59

Query: 61  SSSLSLFLNSD--TTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPW 118
           +SS+S +LNS+  T   R+ + D   L     P       FD    L  + N+F+LPAPW
Sbjct: 60  ASSVSFYLNSESVTVADRITAMD---LAADFIP------EFDR-EELKLELNAFKLPAPW 109

Query: 119 FIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEK 178
           FIYSFMG G+L+CCI L+GCIAAEAISGCCLCFY +L ++  L+E  LVAFIAIDR WEK
Sbjct: 110 FIYSFMGFGVLLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVGLVAFIAIDRSWEK 169

Query: 179 DLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEED 238
           DLP DPTGELD LR FIEDN+++ KW+GI V+  QALSLLLAIILR+MVSTR+T +D E+
Sbjct: 170 DLPLDPTGELDELRHFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEE 229

Query: 239 DYESERIRIREPLI----HQQPIAHSDIWSSRIREKYGLNGGGEQYTFGNNPS 287
           +    R R REPL+    +Q   AH D+W +R+REKYGLN   ++Y   N  S
Sbjct: 230 EV-GVRDRTREPLLNPPANQAAGAHFDLWGARMREKYGLN-NSDRYNSSNQSS 280

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468604|ref|XP_004152011.1| PREDICTED: uncharacterized protein LOC101206480 [Cucumis sativus]

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 166/293 (56%), Positives = 206/293 (70%), Gaps = 19/293 (6%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M R CCH+S AFILK  NFLQ F+GVSII+YS WMLD+WNHHVPV P PP+      S +
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALA-PSPA 59

Query: 61  SSSLSLFLNSD--TTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPW 118
           +SS+S +LNS+  T   R+ + D   L     P       FD    L  + N+F+LPAPW
Sbjct: 60  ASSVSFYLNSESVTVADRITAMD---LAADFIP------EFDR-EELKLELNAFKLPAPW 109

Query: 119 FIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEK 178
           FIYSFMG G+L+CCI L+GCIAAEAISGCCLCFY +L ++  ++E  LVAFIAIDR WEK
Sbjct: 110 FIYSFMGFGVLLCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVGLVAFIAIDRSWEK 169

Query: 179 DLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEED 238
           DLP DPTGELD LR FIEDN+++ KW+GI V+  QALSLLLAIILR+MVSTR+T +D E+
Sbjct: 170 DLPLDPTGELDELRHFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEE 229

Query: 239 DYESERIRIREPLI----HQQPIAHSDIWSSRIREKYGLNGGGEQYTFGNNPS 287
           +    R R REPL+    +Q   AH D+W +R+REKYGLN   ++Y   N  S
Sbjct: 230 EV-GVRDRTREPLLNPPANQAAGAHFDLWGARMREKYGLN-NSDRYNSSNQSS 280

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399283|ref|NP_565468.1| Tetraspanin family protein [Arabidopsis thaliana] gi|75249394|sp|Q93XY5.1|TET18_ARATH RecName: Full=Tetraspanin-18 gi|15450980|gb|AAK96761.1| Unknown protein [Arabidopsis thaliana] gi|20197855|gb|AAD21765.2| expressed protein [Arabidopsis thaliana] gi|21594467|gb|AAM66011.1| unknown [Arabidopsis thaliana] gi|330251889|gb|AEC06983.1| Tetraspanin family protein [Arabidopsis thaliana]

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/282 (57%), Positives = 196/282 (69%), Gaps = 29/282 (10%)

Query: 1   MQRNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVS 60
           M+RNCCH+SFA  LK LNF+Q FIGVSII+YSIWML +++ H+PV P P  + +  T ++
Sbjct: 1   MRRNCCHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIA 60

Query: 61  SSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDVMVSGFDDVSG--LGFDFNSFELPAPW 118
           +S      N                     P+D + S     +G   GF+  S +LPAPW
Sbjct: 61  TSVSEPLKN---------------------PIDFVASIILGSNGGDHGFNLRSLDLPAPW 99

Query: 119 FIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDRRWEK 178
           FIYSFM VGILVC +  IG IAAEAI+GCCLCFY+ILK +L LLEAALVA+IAIDR WEK
Sbjct: 100 FIYSFMAVGILVCIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEK 159

Query: 179 DLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRRTNFDEED 238
           DLP+DPTGEL SLR+FIE+N+DICKWVGI VV VQ LSLLLA++LRAMVST +   DEE+
Sbjct: 160 DLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEE 219

Query: 239 DYESERIRIREPLI----HQQPIAHSDI--WSSRIREKYGLN 274
           D E+ R R  +PL+    +Q P   S I  WSSRIREKYGLN
Sbjct: 220 DDENPRSRTWDPLLGPQGNQAPAGSSKIENWSSRIREKYGLN 261

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560279|ref|XP_002521157.1| conserved hypothetical protein [Ricinus communis] gi|223539726|gb|EEF41308.1| conserved hypothetical protein [Ricinus communis]

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/241 (63%), Positives = 182/241 (75%), Gaps = 29/241 (12%)

Query: 35  MLDQWNHHVPVPPLPPLAPTPDTSVSSSSLSLFLNSDTTQSRVLSHDHRRLTTSTGPLDV 94
           ML+QWNH VP+PP P LAP+PD+   S SL++          V++    R          
Sbjct: 1   MLNQWNHRVPLPPSPILAPSPDSYSQSHSLTVL--------NVVADVAFR---------- 42

Query: 95  MVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAI 154
               FDD  GLG D NSF+LPAPWFIYSFMGVGI++CCI LIGCIAAEAI+GCCLCFY+I
Sbjct: 43  ----FDD--GLGLDLNSFKLPAPWFIYSFMGVGIILCCITLIGCIAAEAINGCCLCFYSI 96

Query: 155 LKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITVVIVQA 214
           LK +L LLEA+LVAFIAIDRRWEKDLPFDPTGEL SLRSF+E+NVDIC+W+GITV+++QA
Sbjct: 97  LKTVLILLEASLVAFIAIDRRWEKDLPFDPTGELQSLRSFVEENVDICEWIGITVIVIQA 156

Query: 215 LSLLLAIILRAMVSTRRTNFDEEDDYESERIRIREPLIHQQPIA-----HSDIWSSRIRE 269
           LSLLLAIILRA++ST R++ + EDDYES R R  EPL++Q         HSDIWSSR+RE
Sbjct: 157 LSLLLAIILRALISTGRSDSEFEDDYESGRRRTWEPLLNQSGQTSGSGVHSDIWSSRMRE 216

Query: 270 K 270
           K
Sbjct: 217 K 217

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	293
TAIR|locus:2038997	270	AT2G20230 [Arabidopsis thalian	0.627	0.681	0.583	5.3e-69
TAIR|locus:2051348	221	AT2G20740 "AT2G20740" [Arabido	0.542	0.719	0.311	1.6e-30
TAIR|locus:2033718	280	TOM2A "tobamovirus multiplicat	0.587	0.614	0.353	1.1e-29

TAIR|locus:2038997 AT2G20230 [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
 Identities = 112/192 (58%), Positives = 132/192 (68%)

Query:    91 PLDVMVSGFDDVSG--LGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCC 148
             P+D + S     +G   GF+  S +LPAPWFIYSFM VGILVC +  IG IAAEAI+GCC
Sbjct:    70 PIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCC 129

Query:   149 LCFYAILKIILFLLEAALVAFIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGIT 208
             LCFY+ILK +L LLEAALVA+IAIDR WEKDLP+DPTGEL SLR+FIE+N+DICKWVGI 
Sbjct:   130 LCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIA 189

Query:   209 XXXXXXXXXXXXXXXXXMVSTRRTNFDEEDDYESERIRIREPLI----HQQPIAHSDI-- 262
                              MVST +   DEE+D E+ R R  +PL+    +Q P   S I  
Sbjct:   190 VVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDPLLGPQGNQAPAGSSKIEN 249

Query:   263 WSSRIREKYGLN 274
             WSSRIREKYGLN
Sbjct:   250 WSSRIREKYGLN 261

GO:0016021 "integral to membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2051348 AT2G20740 "AT2G20740" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
 Identities = 52/167 (31%), Positives = 85/167 (50%)

Query:   109 FNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVA 168
             F   + P PWFIYSF+G+G ++C +   G IAAE ++GCCL  Y    ++L ++E  +VA
Sbjct:    47 FADSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVA 106

Query:   169 FIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITXXXXXXXXXXXXXXXXXMVS 228
              I ++R W+KD P DP+G       FIE N  ICKW+G++                 +  
Sbjct:   107 DIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGP 166

Query:   229 TRRTNFDEEDDYESERIRIRE------PLIHQQPI--AHSDIWSSRI 267
                 ++D +D+Y    + + +      P +  +P+  A    W+ R+
Sbjct:   167 HPHRHYDSDDEYNVSTVALLQDARQPPPYVVGEPMYGAKPGAWTVRL 213

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2033718 TOM2A "tobamovirus multiplication 2A" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
 Identities = 70/198 (35%), Positives = 105/198 (53%)

Query:   110 NSFE-LPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVA 168
             N F+ LP  WFIY F+G+G+ +  I+  GC+   + S CCL  Y++L I+L L+E    A
Sbjct:    71 NIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAA 130

Query:   169 FIAIDRRWEKDLPFDPTGELDSLRSFIEDNVDICKWVGITXXXXXXXXXXXXXXXXXMVS 228
             FI  D  W  +LP D TG  D++ +F+ +N  I +WV +                  MV 
Sbjct:   131 FIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVAL----GAVVFEALLFLLALMVR 186

Query:   229 TRRT--NFDEEDDYESERIRIREPLIHQQ-------PIA--------HSDIWSSRIREKY 271
                T   +D +D+Y + R +IR+P I++Q       P+A         SD WS+R+REKY
Sbjct:   187 AANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKY 246

Query:   272 GLNGGGEQYTFGNNPSAS 289
             GL+    ++T+  NPS S
Sbjct:   247 GLDTS--EFTY--NPSES 260

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0016020 "membrane" evidence=ISS

GO:0046786 "viral replication complex formation and maintenance" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93XY5	TET18_ARATH	No assigned EC number	0.5709	0.8634	0.9370	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	293
pfam00335	221	pfam00335, Tetraspannin, Tetraspanin family	3e-05

>gnl|CDD|215864 pfam00335, Tetraspannin, Tetraspanin family

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 17/58 (29%), Positives = 27/58 (46%)

Query: 117 PWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVAFIAIDR 174
                  + +G+++  +  +GC  A   S C L  Y IL +ILF+LE A      + R
Sbjct: 44  RALYILIIVLGVIILLVGFLGCCGAIKESRCLLLTYFILLLILFILEIAAGILAFVYR 101

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	293
KOG3882	237	consensus Tetraspanin family integral membrane pro	99.91
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	99.6
KOG4433	526	consensus Tweety transmembrane/cell surface protei	94.15
PF04906	406	Tweety: Tweety; InterPro: IPR006990 None of the me	90.65
cd03164	86	CD53_like_LEL Tetraspanin, extracellular domain or	90.26

>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]

Probab=99.91  E-value=1.4e-23  Score=190.12  Aligned_cols=163  Identities=26%  Similarity=0.442  Sum_probs=136.1

Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccCCCCCCCCCCCCCCCCCcccccccccccccccccccccc
Q 022738            3 RNCCHISFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVSSSSLSLFLNSDTTQSRVLSHDH   82 (293)
Q Consensus         3 ~~~C~~~lk~lL~~lN~l~~l~Gl~lI~~giwml~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (293)
                      .++|..|+|++++++|+++|++|++++++|+|++.+......                                     +
T Consensus         2 ~~~~~~~~K~~lf~~N~~~~l~G~~ll~~giw~~~~~~~~~~-------------------------------------~   44 (237)
T KOG3882|consen    2 MSCGSSCLKYLLFLLNLLFWLLGLLLLAVGIWLLADKGFLSS-------------------------------------L   44 (237)
T ss_pred             CCcccchHHHHHHHHHHHHHHHHHHHHHhhhheeEeccchhh-------------------------------------c
Confidence            678999999999999999999999999999999887665211                                     0


Q ss_pred             ccccccCCCcccccccccCCCCCCcccCCCCCCcchhhhHHHhhhHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 022738           83 RRLTTSTGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLL  162 (293)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~wfIY~~i~vG~i~~iis~~GcigA~~~n~c~L~~Y~vll~lLill  162 (293)
                      .     .                   . . .+..+|   +++++|+++++++++||+||.+||+|+|.+|++++++++++
T Consensus        45 ~-----~-------------------~-~-~~~~~~---ili~~G~v~~~v~flGc~Ga~~es~~lL~~y~~~l~l~~i~   95 (237)
T KOG3882|consen   45 L-----E-------------------S-D-FLVPAY---ILIAVGGVVFLVGFLGCCGALRESRCLLLSYFILLLLLFIA   95 (237)
T ss_pred             c-----c-------------------c-c-hhcchh---hhhhhhHHHHHHHHhhhhhhHhhhHHHHHHHHHHHHHHHHH
Confidence            0     0                   0 0 122334   89999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcc-----------------------c----------------------CCCCCC----CC------------
Q 022738          163 EAALVAFIAI-----------------------D----------------------RRWEKD----LP------------  181 (293)
Q Consensus       163 Eia~~a~i~~-----------------------n----------------------~dW~~~----iP------------  181 (293)
                      |++++++.+.                       |                      .||.+.    +|            
T Consensus        96 e~~~~i~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~d~~Q~~~~CCG~~~~~~~~~~~~~~vP~SCC~~~~~~~~  175 (237)
T KOG3882|consen   96 ELAAGILAFVFRDSLRDELEEQLLKSIWNNYSSDPDLGEAWDKLQRELKCCGVNGYSDYFNCSSNNVPPSCCKRTRRQKF  175 (237)
T ss_pred             HHHHHHHhheeHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHhccCCcCCCchHHhcCCCCCCCcccCCCcccccc
Confidence            9999966552                       0                      123211    55            


Q ss_pred             -------CCCCCchHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 022738          182 -------FDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAMVSTRR  231 (293)
Q Consensus       182 -------~y~tGC~~~l~~~l~~n~~ii~~v~l~v~iiQilgillA~~L~~~i~~~~  231 (293)
                             .|++||.+++.+|+++|+.++++++++++++|++++++|++|...+++++
T Consensus       176 ~~~~~~~~~~~GC~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~a~~l~~~i~~~~  232 (237)
T KOG3882|consen  176 PQDVPDNIYTEGCLEKLSSWLESNLLIIGGVGLGIAVLELLGMILACCLANAIRNQR  232 (237)
T ss_pred             cccchhhhhccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence                   48899999999999999999999999999999999999999998876544

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=99.60  E-value=8.3e-17  Score=138.86  Aligned_cols=152  Identities=28%  Similarity=0.462  Sum_probs=15.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccCCCCCCCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 022738            9 SFAFILKFLNFLQGFIGVSIILYSIWMLDQWNHHVPVPPLPPLAPTPDTSVSSSSLSLFLNSDTTQSRVLSHDHRRLTTS   88 (293)
Q Consensus         9 ~lk~lL~~lN~l~~l~Gl~lI~~giwml~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   88 (293)
                      |+|+++.++|+++++.|++++++|+|+...... ..   .                                ..      
T Consensus         1 c~k~~l~~~n~l~~l~g~~li~~g~~~~~~~~~-~~---~--------------------------------~~------   38 (221)
T PF00335_consen    1 CLKYILFFLNVLFLLLGLALIGVGIWLLVNNQY-LS---E--------------------------------FS------   38 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cc---c--------------------------------cc------
Confidence            689999999999999999999999999421111 10   0                                00      


Q ss_pred             CCCcccccccccCCCCCCcccCCCCCCcchhhhHHHhhhHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 022738           89 TGPLDVMVSGFDDVSGLGFDFNSFELPAPWFIYSFMGVGILVCCIALIGCIAAEAISGCCLCFYAILKIILFLLEAALVA  168 (293)
Q Consensus        89 ~~~~~~~~~~~~g~~~~~~~~~~~~l~~~wfIY~~i~vG~i~~iis~~GcigA~~~n~c~L~~Y~vll~lLillEia~~a  168 (293)
                                           .......   +++++.+|+++++++++||+|+.++|+|+|..|.+++++++++|++++.
T Consensus        39 ---------------------~~~~~~~---~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l~~y~~~~~~~~v~~~~~~i   94 (221)
T PF00335_consen   39 ---------------------SSFISYV---IIILIFIGIFILIISFLGCIGACRKNRCLLIIYIILLILLFVLELVVGI   94 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ---------------------ccchhHH---HHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccchhhHHHHHHHHHH
Confidence                                 0000111   2367779999999999999999999999999999999999999999985


Q ss_pred             hhcc--c-------------------------------------------CCCCCC-----------------------C
Q 022738          169 FIAI--D-------------------------------------------RRWEKD-----------------------L  180 (293)
Q Consensus       169 ~i~~--n-------------------------------------------~dW~~~-----------------------i  180 (293)
                      +.+.  +                                           +||.+.                       -
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iq~~~~CCG~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (221)
T PF00335_consen   95 VAFSYRDQLNSSLKDGLSLRCMKSYNSNESFSEAWDNIQEKFECCGVNSPDDWFTSKWSSCSSPDSCPDCQCPDDCSSEN  174 (221)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHSSTT-CHHHHHHHHHHHHHT--SSTTCHHHHHHHHHT---------TCS-TTCCCCH
T ss_pred             hhhhccccccccccccccchhhhccccccchhhheecccccccccCCCCCcccccccccccccccccccccccccccccc
Confidence            4433  0                                           112100                       1


Q ss_pred             CCCCCCchHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 022738          181 PFDPTGELDSLRSFIEDNVDICKWVGITVVIVQALSLLLAIILRAM  226 (293)
Q Consensus       181 P~y~tGC~~~l~~~l~~n~~ii~~v~l~v~iiQilgillA~~L~~~  226 (293)
                      +.+.+||.+++.++++++...+.+++++++++|++++++|++|.+.
T Consensus       175 ~~~~~gC~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~~l~~~  220 (221)
T PF00335_consen  175 SIYTRGCYDKLREYLRSYLKYIGIVSLAILVLQLIGIILACCLCRH  220 (221)
T ss_dssp             CCTST-HHHHHHHHHCT-----------------------------
T ss_pred             cccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            1689999999999999999999999999999999999999998753

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>KOG4433 consensus Tweety transmembrane/cell surface protein [General function prediction only]

Probab=94.15  E-value=0.48  Score=47.93  Aligned_cols=36  Identities=14%  Similarity=0.341  Sum_probs=29.1

Q ss_pred             hHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 022738          127 GILVCCIALIGCIAAEAISGCCLCFYAILKIILFLL  162 (293)
Q Consensus       127 G~i~~iis~~GcigA~~~n~c~L~~Y~vll~lLill  162 (293)
                      =++.+++.+++++|-+|+|||.|.+|++.=++.+++
T Consensus       217 L~l~LvvC~v~vlglak~Skc~li~fsv~Gll~lvi  252 (526)
T KOG4433|consen  217 LTLLLVVCLVLVLGLAKRSKCLLIVFSVCGLLALVI  252 (526)
T ss_pred             HHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHH
Confidence            357788888999999999999999998765555544

>PF04906 Tweety: Tweety; InterPro: IPR006990 None of the members of the tweety (tty) family have been functionally characterised

Probab=90.65  E-value=0.79  Score=45.53  Aligned_cols=34  Identities=26%  Similarity=0.531  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 022738          128 ILVCCIALIGCIAAEAISGCCLCFYAILKIILFL  161 (293)
Q Consensus       128 ~i~~iis~~GcigA~~~n~c~L~~Y~vll~lLil  161 (293)
                      ++.+++.++|++|..+++||.+..++++-++.++
T Consensus       194 ~l~l~icl~~l~glar~Sk~~li~~~v~gll~lv  227 (406)
T PF04906_consen  194 ILDLVICLLGLLGLARQSKCLLIVFSVLGLLALV  227 (406)
T ss_pred             HHHHHHHHHHHHHHHhcCcceEEEeeeccHHHHH
Confidence            4666777888899999999999876665444333

However, they are considered to be transmembrane proteins with five potential membrane-spanning regions. A number of potential functions have been suggested on the basis of homology to the yeast FTR1 and FTH1 iron transporter proteins and the mammalian neurotensin receptors 1 and 2 in that they have a similar hydrophobicity profiles although there is no detectable sequence homology to the tweety-related proteins. It has been proposed that the tweety-related proteins could be involved in transport of iron or other divalent cations or alternatively that they may be membrane-bound receptors [].

>cd03164 CD53_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

Probab=90.26  E-value=0.19  Score=38.14  Aligned_cols=30  Identities=20%  Similarity=0.493  Sum_probs=24.0

Q ss_pred             CCCCCCCC---------CCCCCchHHHHHHHHhhchhHH
Q 022738          174 RRWEKDLP---------FDPTGELDSLRSFIEDNVDICK  203 (293)
Q Consensus       174 ~dW~~~iP---------~y~tGC~~~l~~~l~~n~~ii~  203 (293)
                      +||.+.+|         .|++||.+++.+|+++|+.+++
T Consensus        48 ~Dw~~~vP~SCC~~~~~~~~~GC~~~~~~~~~~~~~iig   86 (86)
T cd03164          48 TDWGSGVPSSCCSSDTEYKVEGCYKKLKNWFESNFLYTG   86 (86)
T ss_pred             hhhCCCCChhhcCCCCccccccHHHHHHHHHHHHHHHhC
Confidence            56655555         5889999999999999988753

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00