Citrus Sinensis ID: 022849


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
MCPKQHKHRASSTGLPEWITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRIAQALKKAQSQGKSLKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQMEMSSAFVVDAPHAIVNSRGLGPAKVNHDDDADIAEKKC
ccccccccccccccccccEEEEEccccccccccccccccEEccccccEEEccccccccccccccccccccEEEEEEEEEcccccccccccccHHHHHHHHHHHcccccccEEEEEEEEEcccccccEEEEEcccccccHHHHHHHHHccccccccccEEEEEEccccHHHHHHHHcccccEEcccEEEEEEEEcccEEEEEEEcccHHHHHHHHHHHHccccEEEEEEEEEEEcccccccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHcc
ccccccHccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccEEEEHHccccccHHHHHcccccHHHHHHHcccccccccccEEEEEEEEEcccccEEEEEEEEccccccccHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHccccccccccccEEEEEccccEEEEEEEccHHHHHHHHHHHHHHHHHHHEEHHHHHEEcccHHHccHHEEEEEEEccccHHHcEEcccccHHHccccccccccccccccccccccc
mcpkqhkhrasstglpewitesihggsllhvdletgtngwasppgdlfflrsrnyftkkqkspagdylllpIGMDWLRSTTKldnvlarpDNRIAQALKKAQSQGKSLKSFIFAVNlqvpgkdqhsAVFYfatedpiplgsLLYRfvngddafrnQRFKIVNRIVKGPWIVKKAVGNYSACLLGKAltcnyhrgpnyleiDVDIASSTIASAILHLALGYVTSVTIDMgflvesqaedelpeRLLGAVRVCQMEMssafvvdaphaivnsrglgpakvnhdddadiaekkc
mcpkqhkhrasstglpewITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKkqkspagdylLLPIGMDWLRSTTKLDNVLARPDNRIAQALKKAQSQGKSLKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQMEMSSAFVVDAPHAIVnsrglgpakvnhdddadiaekkc
MCPKQHKHRASSTGLPEWITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRIAQALKKAQSQGKSLKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQMEMSSAFVVDAPHAIVNSRGLGPAKVNHDDDADIAEKKC
****************EWITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARP*****************LKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQMEMSSAFVVDAPHAIVN**********************
**********************I**GSL**********GWASPPGDLFFLRSRNYFT*K*KSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRI**A*****SQGKSLKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQMEMSSAF********************************
**************LPEWITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRIAQ**********SLKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQMEMSSAFVVDAPHAIVNSRGLGPAKVNHDDDADIAEKKC
*****************WITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRIAQALKKAQSQGKSLKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQMEMSSAFVVDAP***************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MCPKQHKHRASSTGLPEWITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRIAQALKKAQSQGKSLKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQMEMSSAFVVDAPHAIVNSRGLGPAKVNHDDDADIAEKKC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
15238248302 uncharacterized protein [Arabidopsis tha 0.979 0.943 0.738 1e-128
22655107302 putative protein [Arabidopsis thaliana] 0.979 0.943 0.738 1e-128
297807111302 hypothetical protein ARALYDRAFT_487909 [ 0.979 0.943 0.738 1e-128
21592409302 unknown [Arabidopsis thaliana] 0.979 0.943 0.735 1e-127
312283181301 unnamed protein product [Thellungiella h 0.979 0.946 0.730 1e-126
255548658309 lipid binding protein, putative [Ricinus 0.979 0.922 0.744 1e-126
224143374272 predicted protein [Populus trichocarpa] 0.907 0.970 0.772 1e-122
449441844301 PREDICTED: uncharacterized protein LOC10 0.938 0.906 0.760 1e-122
225430563305 PREDICTED: uncharacterized protein LOC10 0.979 0.934 0.715 1e-121
147866734305 hypothetical protein VITISV_035882 [Viti 0.979 0.934 0.712 1e-121
>gi|15238248|ref|NP_196636.1| uncharacterized protein [Arabidopsis thaliana] gi|8979709|emb|CAB96830.1| putative protein [Arabidopsis thaliana] gi|56550679|gb|AAV97793.1| At5g10750 [Arabidopsis thaliana] gi|57222152|gb|AAW38983.1| At5g10750 [Arabidopsis thaliana] gi|332004209|gb|AED91592.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/302 (73%), Positives = 252/302 (83%), Gaps = 17/302 (5%)

Query: 1   MCPKQHKHR-------------ASSTGLPEWITESIHGGSLLHVDLETGTNGWASPPGDL 47
           M P + +HR             ASS+ +PEWITES +GGSL  VD +TGT+GWASPPGD+
Sbjct: 1   MSPSKQRHRSSTGENKSKPVRSASSSAIPEWITESTNGGSLRRVDPDTGTDGWASPPGDV 60

Query: 48  FFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRIAQALKKAQSQGKS 107
           F LRS +Y +KKQK+PAGDYLL P GMDWL+S+TKL+N LARPDNR+A AL+KAQS+G+S
Sbjct: 61  FSLRSDSYLSKKQKTPAGDYLLSPAGMDWLKSSTKLENALARPDNRVAHALRKAQSRGQS 120

Query: 108 LKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKG 167
           LKSFIFAVNLQ+PGKD HSAVFYFATE+PIP GSLL+RF+NGDDAFRNQRFKIVNRIVKG
Sbjct: 121 LKSFIFAVNLQIPGKDHHSAVFYFATEEPIPSGSLLHRFINGDDAFRNQRFKIVNRIVKG 180

Query: 168 PWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTID 227
           PW+VK AVGNYSACLLGKALTCNYHRGPNY EIDVDI+SS IA+AIL LALGYVTSVTID
Sbjct: 181 PWVVKAAVGNYSACLLGKALTCNYHRGPNYFEIDVDISSSAIATAILRLALGYVTSVTID 240

Query: 228 MGFLVESQAEDELPERLLGAVRVCQMEMSSAFVVDAPHAIVNS----RGLGPAKVNHDDD 283
           MGFL E+Q E+ELPERL+GAVRVCQMEMSSAFVVDAP          R L  AKVNHD+D
Sbjct: 241 MGFLAEAQTEEELPERLIGAVRVCQMEMSSAFVVDAPPPQQLPSQPCRTLSSAKVNHDED 300

Query: 284 AD 285
            D
Sbjct: 301 ED 302




Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22655107|gb|AAM98144.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297807111|ref|XP_002871439.1| hypothetical protein ARALYDRAFT_487909 [Arabidopsis lyrata subsp. lyrata] gi|297317276|gb|EFH47698.1| hypothetical protein ARALYDRAFT_487909 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21592409|gb|AAM64360.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|312283181|dbj|BAJ34456.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|255548658|ref|XP_002515385.1| lipid binding protein, putative [Ricinus communis] gi|223545329|gb|EEF46834.1| lipid binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224143374|ref|XP_002324934.1| predicted protein [Populus trichocarpa] gi|222866368|gb|EEF03499.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449441844|ref|XP_004138692.1| PREDICTED: uncharacterized protein LOC101208308 [Cucumis sativus] gi|449493297|ref|XP_004159247.1| PREDICTED: uncharacterized protein LOC101230038 [Cucumis sativus] Back     alignment and taxonomy information
>gi|225430563|ref|XP_002262758.1| PREDICTED: uncharacterized protein LOC100257058 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147866734|emb|CAN83078.1| hypothetical protein VITISV_035882 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
TAIR|locus:2183705302 AT5G10750 "AT5G10750" [Arabido 0.948 0.913 0.782 1e-116
TAIR|locus:2179245286 AT5G25010 "AT5G25010" [Arabido 0.900 0.916 0.585 8e-85
TAIR|locus:2149428294 AT5G24990 "AT5G24990" [Arabido 0.917 0.908 0.575 1.9e-83
TAIR|locus:2179255269 AT5G25020 "AT5G25020" [Arabido 0.391 0.423 0.652 3.2e-75
TAIR|locus:2198866313 AT1G06050 "AT1G06050" [Arabido 0.872 0.811 0.476 1.1e-62
TAIR|locus:2163548719 AT5G45560 [Arabidopsis thalian 0.786 0.318 0.460 5.6e-52
TAIR|locus:2117134724 EDR2 "ENHANCED DISEASE RESISTA 0.786 0.316 0.456 2.2e-50
TAIR|locus:2182417811 AT5G35180 [Arabidopsis thalian 0.804 0.288 0.426 2.8e-44
TAIR|locus:2057547737 AT2G28320 [Arabidopsis thalian 0.738 0.291 0.423 9.6e-42
TAIR|locus:2102465733 AT3G54800 [Arabidopsis thalian 0.728 0.289 0.397 2.5e-40
TAIR|locus:2183705 AT5G10750 "AT5G10750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
 Identities = 219/280 (78%), Positives = 248/280 (88%)

Query:    10 ASSTGLPEWITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKKQKSPAGDYLL 69
             ASS+ +PEWITES +GGSL  VD +TGT+GWASPPGD+F LRS +Y +KKQK+PAGDYLL
Sbjct:    23 ASSSAIPEWITESTNGGSLRRVDPDTGTDGWASPPGDVFSLRSDSYLSKKQKTPAGDYLL 82

Query:    70 LPIGMDWLRSTTKLDNVLARPDNRIAQALKKAQSQGKSLKSFIFAVNLQVPGKDQHSAVF 129
              P GMDWL+S+TKL+N LARPDNR+A AL+KAQS+G+SLKSFIFAVNLQ+PGKD HSAVF
Sbjct:    83 SPAGMDWLKSSTKLENALARPDNRVAHALRKAQSRGQSLKSFIFAVNLQIPGKDHHSAVF 142

Query:   130 YFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTC 189
             YFATE+PIP GSLL+RF+NGDDAFRNQRFKIVNRIVKGPW+VK AVGNYSACLLGKALTC
Sbjct:   143 YFATEEPIPSGSLLHRFINGDDAFRNQRFKIVNRIVKGPWVVKAAVGNYSACLLGKALTC 202

Query:   190 NYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVR 249
             NYHRGPNY EIDVDI+SS IA+AIL LALGYVTSVTIDMGFL E+Q E+ELPERL+GAVR
Sbjct:   203 NYHRGPNYFEIDVDISSSAIATAILRLALGYVTSVTIDMGFLAEAQTEEELPERLIGAVR 262

Query:   250 VCQMEMSSAFVVDAP--HAIVNS--RGLGPAKVNHDDDAD 285
             VCQMEMSSAFVVDAP    + +   R L  AKVNHD+D D
Sbjct:   263 VCQMEMSSAFVVDAPPPQQLPSQPCRTLSSAKVNHDEDED 302




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2179245 AT5G25010 "AT5G25010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149428 AT5G24990 "AT5G24990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179255 AT5G25020 "AT5G25020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198866 AT1G06050 "AT1G06050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163548 AT5G45560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117134 EDR2 "ENHANCED DISEASE RESISTANCE 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182417 AT5G35180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057547 AT2G28320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102465 AT3G54800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
AT5G10750
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF1336 (InterPro-IPR009769); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G24990.1); Has 176 Blast hits to 175 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 10 (source- NCBI BLink). (302 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
MKS1
MKS1 (MAP kinase substrate 1); protein binding; Encodes a nuclear-localized member of a plant s [...] (222 aa)
       0.548
AT3G12770
pentatricopeptide (PPR) repeat-containing protein; pentatricopeptide (PPR) repeat-containing pr [...] (719 aa)
       0.548
AT5G51620
unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (68 aa)
       0.547
AT3G53490
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (225 aa)
       0.547
ATPAP1
ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1); phosphatidate phosphatase; Encodes phosphatidate phos [...] (327 aa)
       0.547
CIPK9
CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); ATP binding / kinase/ protein kinase/ protein serine/ [...] (451 aa)
       0.547
NAK
NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine ki [...] (389 aa)
       0.546
AT4G24370
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (164 aa)
       0.546
ATCEN2
ATCEN2 (CENTRIN2); calcium ion binding; CENTRIN2 (ATCEN2); FUNCTIONS IN- calcium ion binding; I [...] (169 aa)
       0.546
FUT11
FUT11 (FUCOSYLTRANSFERASE 11); 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase/ [...] (501 aa)
       0.546

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
pfam07059215 pfam07059, DUF1336, Protein of unknown function (D 1e-107
PLN00188719 PLN00188, PLN00188, enhanced disease resistance pr 1e-78
>gnl|CDD|219281 pfam07059, DUF1336, Protein of unknown function (DUF1336) Back     alignment and domain information
 Score =  310 bits (796), Expect = e-107
 Identities = 110/222 (49%), Positives = 148/222 (66%), Gaps = 14/222 (6%)

Query: 40  WASPPGDLFFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRIAQALK 99
           W+ P    F +R + Y   K+K PAG+ L   IG+DW +S  K+D++   PD R+ +A K
Sbjct: 1   WSEPDPSTFKVRGKTYLKDKKKIPAGNPLYTLIGVDWFKSDKKIDHIANHPDLRVQKAAK 60

Query: 100 KAQSQGKSLKSFIFAVNLQVPGKDQHSAVFYFATEDPIP------LGSLLYRFVNGD-DA 152
           K          F+  VN+QVPG + +S V YFA E+P+        GSLL RFV+GD DA
Sbjct: 61  KGLP-------FVLIVNIQVPGGEGYSLVLYFALEEPVEKELSPAFGSLLRRFVDGDEDA 113

Query: 153 FRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASA 212
           FRN+R KI+ RIVKG WIV++ V N   CL+GKA  CNY+RGPNYLEIDVDI SS+IA  
Sbjct: 114 FRNERLKIIPRIVKGSWIVRQLVYNEKPCLVGKAPQCNYYRGPNYLEIDVDIGSSSIARK 173

Query: 213 ILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQME 254
            L L LGY+T++ +D+ F ++ Q E+ELPERLLGAVR+ +++
Sbjct: 174 GLELFLGYLTNLVLDLAFTIQGQTEEELPERLLGAVRLNKID 215


This family represents the C-terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function. Length = 215

>gnl|CDD|215094 PLN00188, PLN00188, enhanced disease resistance protein (EDR2); Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 291
PLN00188719 enhanced disease resistance protein (EDR2); Provis 100.0
PF07059227 DUF1336: Protein of unknown function (DUF1336); In 100.0
>PLN00188 enhanced disease resistance protein (EDR2); Provisional Back     alignment and domain information
Probab=100.00  E-value=6.7e-83  Score=648.14  Aligned_cols=244  Identities=45%  Similarity=0.763  Sum_probs=231.3

Q ss_pred             CCCccceeeecccCcccccCCCCCCCCccCCCCCceeecCCCcccCCccccCCCCcceeeeeeeeecCCCccccccCCCc
Q 022849           13 TGLPEWITESIHGGSLLHVDLETGTNGWASPPGDLFFLRSRNYFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDN   92 (291)
Q Consensus        13 ~~~~~~~~~~~~g~sl~~~~~~~~~~~Ws~p~~~~F~VRG~~Yl~dk~Kvps~~~l~~lvgvDlf~s~~ri~hIa~~~~~   92 (291)
                      +..++-++...++|+|++.+.+++.+|||+|+++.|+|||+|||+||+|+||+++||+|+|||||++++|++|||+||.+
T Consensus       474 ~~~~~~~d~~~~~g~l~~~~~~~~~ncWs~Pd~~~F~VRG~~Yl~Dk~KvPAg~~l~~lvgvDwfks~~ridhVa~r~~~  553 (719)
T PLN00188        474 EEPQDKIDLSCFSGNLRRDDRDKARDCWRISDGNNFKVRSKNFCYDKSKIPAGKHLMDLVAVDWFKDTKRMDHVARRKGC  553 (719)
T ss_pred             cCCcccccccccccccccCCCCCCCCCccCCCCcceEEcCCCcccCCccccCCccceeeEEEEEEcCCchhhHhhcCCCc
Confidence            45567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCCCceEEEEEEEecCCCCceEEEEEeeCCCCCchhhHHHhhcCCccccccceeEEeeeccchhHHH
Q 022849           93 RIAQALKKAQSQGKSLKSFIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVK  172 (291)
Q Consensus        93 ~~~~~l~~~~~~~~~~~pf~fiVNlqlP~~~~~s~V~Yf~~~~~~~~~~Ll~rFl~gDd~fRn~RfKLIp~Vv~gpwiVr  172 (291)
                      +++.+.        ...||+|||||||||+++||+|+||+++ +++.++||+||++|||+|||+||||||+|++||||||
T Consensus       554 ~vq~a~--------~k~~F~fiVNlQvPg~~~ys~V~Yf~~~-~l~~~sLl~rF~~GDD~fRnsRfKLIP~Iv~GpWiVk  624 (719)
T PLN00188        554 AAQVAA--------EKGLFSFVVNLQVPGSTHYSMVFYFVTK-ELVPGSLLQRFVDGDDEFRNSRLKLIPSVPKGSWIVR  624 (719)
T ss_pred             hhhhhc--------ccCCcEEEEEEEccCCCceEEEEEEecc-CCCCchHHHHhccCchhHhhCceEEeccccCCceEEE
Confidence            876642        1248999999999999999999999985 5888999999999999999999999999999999999


Q ss_pred             HhhcCCCcccccceeeeeEeeCCCEEEEEEEcCchHHHHHHHHHhhcccceEEEeeeeeeecCCccccccceeceEEecc
Q 022849          173 KAVGNYSACLLGKALTCNYHRGPNYLEIDVDIASSTIASAILHLALGYVTSVTIDMGFLVESQAEDELPERLLGAVRVCQ  252 (291)
Q Consensus       173 ~aVG~~~~~llGk~l~~~y~~g~nYlEiDvDI~sS~vA~~i~~l~~g~~k~lvvD~gf~IEg~~eeELPE~lLG~vRl~~  252 (291)
                      ++||++ ||||||+|+|+||+|+||||||||||||++|++|++|++||+++|||||||+|||+++|||||+|||||||++
T Consensus       625 ~aVG~~-p~llGk~l~~~Y~~g~nylEvdvDi~ss~va~~v~~l~~g~~~~lvvD~af~ie~~~~eELPE~llG~~Rl~~  703 (719)
T PLN00188        625 QSVGST-PCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTYEELPERLIGAVRVSH  703 (719)
T ss_pred             eccCCc-ceEeeeecceeEecCCCeEEEEEeeccHHHHHHHHHHHHhhhhheEEEEEEEEecCChhhCchhheeeEEecc
Confidence            999996 6999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCcc
Q 022849          253 MEMSSAFVVDAPHA  266 (291)
Q Consensus       253 lD~~~A~~ld~~~~  266 (291)
                      ||+++|+.++...+
T Consensus       704 i~~~~A~~~~~~~~  717 (719)
T PLN00188        704 VELSSAIVPKLDPD  717 (719)
T ss_pred             cchhhccccCCCCC
Confidence            99999998876643



>PF07059 DUF1336: Protein of unknown function (DUF1336); InterPro: IPR009769 This entry represents the C terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00