Citrus Sinensis ID: 022862

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MATTKTKTTSTTSLLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccEEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHccccccccEEEEEcccEEEEccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccccEEEEccEEEEEcccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcccccccccccccHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEcccccccccccccEEEcccccccccHHHHHHHHHHccccHEcccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHccHHcccccccEEEccccEEEEEEEcccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mattktkttstTSLLLLFSFIIVFLsipsfsssssstdsfvfggcaqqkytpssayeSNLNSLLTSLVNsatyssynnftimgsspqDVVYGLYQcrgdlsmpdcATCVARAVTQVGglcyqdcggalqlqgcyvkydnatflgvedktvvfkkcgpsvgyepdamgRRDAVLQGLMtasgpyrvggardvQGLAQCvgdlsagecQDCLVQAIGRLksdcgtadygdmflgKCYVrystgkapnsykdhndkssnegEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK
Flexible Loop (DISEMBL)
mattktkttsttsLLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPsvgyepdamGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK
Low Complexity Region (SEG)
MAttktkttsttsllllfsfiivflsipsfsssssstdsfvfGGCAQQKYTPSSAYEsnlnslltslvnsATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK
Disordered region (IsUnstruct)
***********TSLLLLFSFIIVFLSIPSF*********FVFGGCAQQKYTP*SAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYST********************TFAIIVGLLAGVALIIIFLTFIRKVFG****
Disordered Region (DISOPRED)
**************LLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGK*********************IIVGLLAGVALIIIFLTFIRKVFGE***
Disordered Region (DISEMBL)
**********TTSLLLLFSFIIVFLSIPSF*********FVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNS**********EGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK
Disordered Region (DISPRO)
*******TTSTTSLLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYK********EGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEH**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATTKTKTTSTTSLLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	291	2.2.26 [Sep-21-2011]
Q0WPN8	298	Cysteine-rich repeat secr	yes	no	0.862	0.842	0.697	8e-99
Q9ZU94	288	Cysteine-rich repeat secr	no	no	0.924	0.934	0.564	2e-81
Q8GUJ2	299	Cysteine-rich repeat secr	no	no	0.938	0.913	0.462	6e-61
Q6NKQ9	279	Cysteine-rich repeat secr	no	no	0.828	0.863	0.388	2e-46
O22784	304	Cysteine-rich repeat secr	no	no	0.927	0.888	0.313	2e-26
Q6NM73	307	Cysteine-rich repeat secr	no	no	0.927	0.879	0.281	3e-24
Q8GXV7	303	Cysteine-rich repeat secr	no	no	0.838	0.805	0.298	2e-21
Q5Q0E2	324	Cysteine-rich repeat secr	no	no	0.752	0.675	0.285	9e-19
Q9SH43	268	Putative cysteine-rich re	no	no	0.766	0.832	0.287	4e-17
Q9LRJ9	252	Cysteine-rich repeat secr	no	no	0.769	0.888	0.275	4e-16

>sp|Q0WPN8|CRR60_ARATH Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1

 Score =  360 bits (923), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 175/251 (69%), Positives = 202/251 (80%)

Query: 20  FIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNF 79
           F ++  + PS SS++S+TD+FVFGGC+QQK++P+SAYESNLNSLLTSLVNSATYSSYNNF
Sbjct: 17  FFLIAATAPSLSSATSATDTFVFGGCSQQKFSPASAYESNLNSLLTSLVNSATYSSYNNF 76

Query: 80  TIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDN 139
           TIMGSS  D   GL+QCRGDLSMPDCATCVARAV+QVG LC   CGGALQL GCY+KYDN
Sbjct: 77  TIMGSSSSDTARGLFQCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDN 136

Query: 140 ATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVG 199
            +FLG EDKTVV KKCG S GY  D + RRDAVL  L+   G +R GG+ DVQG+ QCVG
Sbjct: 137 ISFLGQEDKTVVLKKCGSSEGYNTDGISRRDAVLTELVNGGGYFRAGGSGDVQGMGQCVG 196

Query: 200 DLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGE 259
           DL+  ECQDCL  AIGRLK+DCGTA +GDMFL KCY RYST  A +  K HN K++  GE
Sbjct: 197 DLTVSECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYSTDGAQHYAKSHNYKTNYGGE 256

Query: 260 KTFAIIVGLLA 270
           KTFAII+GLLA
Sbjct: 257 KTFAIIIGLLA 267

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZU94|CRR12_ARATH Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=2 SV=2

 Score =  302 bits (773), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 158/280 (56%), Positives = 206/280 (73%), Gaps = 11/280 (3%)

Query: 22  IVFLSIPSF--SSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNF 79
           ++F+++ S   + SS++ D+F++GGC+Q+KY P S YESN+NSLLTS V+SA+  +YNNF
Sbjct: 7   VLFIAVVSLLGTFSSAAVDTFIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNF 66

Query: 80  TIMG-SSPQDVVYGLYQCRGDLSMP--DCATCVARAVTQVGGLCYQDCGGALQLQGCYVK 136
           T  G S     VYGLYQCRGDLS    DCA CVARAV+++G LC    GGALQL+GC+VK
Sbjct: 67  TTNGISGDSSSVYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVK 126

Query: 137 YDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTAS-GPYRVGGARDVQGLA 195
           YDN TFLGVEDKTVV ++CGP VGY  D M RRD+V+  L  +S G YRVG + ++QG+A
Sbjct: 127 YDNTTFLGVEDKTVVVRRCGPPVGYNSDEMTRRDSVVGSLAASSGGSYRVGVSGELQGVA 186

Query: 196 QCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYST----GKAPNSYKDHN 251
           QC GDLSA ECQDCL++AIGRL++DCG A +GD++L KCY RYS      +A     + N
Sbjct: 187 QCTGDLSATECQDCLMEAIGRLRTDCGGAAWGDVYLAKCYARYSARGGHSRANGYGGNRN 246

Query: 252 DKSSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK 291
           +   +E EKT AIIVGL+AGV L+++FL+F+ K   E GK
Sbjct: 247 NNDDDEIEKTLAIIVGLIAGVTLLVVFLSFMAKSC-ERGK 285

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GUJ2|CRR2_ARATH Cysteine-rich repeat secretory protein 2 OS=Arabidopsis thaliana GN=CRRSP2 PE=2 SV=1

 Score =  234 bits (596), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 135/292 (46%), Positives = 182/292 (62%), Gaps = 19/292 (6%)

Query: 5   KTKTTSTTSLLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLL 64
           KTKTTS    LL F    V L  PS   SSS TD++++  C+  K++PSS YE+NLNSLL
Sbjct: 3   KTKTTS----LLCFLLTAVILMNPS---SSSPTDNYIYAVCSPAKFSPSSGYETNLNSLL 55

Query: 65  TSLVNSATYSSYNNFTIMGSSPQDVV--YGLYQCRGDLSMPDCATCVARAVTQVGGLCYQ 122
           +S V S   + Y NFT+    P+  V  YG+YQCRGDL    C+TCV+ AV QVG LC  
Sbjct: 56  SSFVTSTAQTRYANFTVPTGKPEPTVTVYGIYQCRGDLDPTACSTCVSSAVAQVGALCSN 115

Query: 123 DCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGY-EPDAMGRRDAVLQGLMTASG 181
              G LQ++ C ++YDN +FLGV+DKT++  KCG  + + + DA+ +   V+  L T  G
Sbjct: 116 SYSGFLQMENCLIRYDNKSFLGVQDKTLILNKCGQPMEFNDQDALTKASDVIGSLGTGDG 175

Query: 182 PYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTG 241
            YR GG  +VQG+AQC GDLS  +CQDCL  AIGRLKSDCG A  G ++L KCY R+S G
Sbjct: 176 SYRTGGNGNVQGVAQCSGDLSTSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFSVG 235

Query: 242 -----KAPNSYKDHNDKSSNEGE----KTFAIIVGLLAGVALIIIFLTFIRK 284
                + P     H  +  N+ +    KT AII+G++  + L+++FL F+ K
Sbjct: 236 GSHARQTPGPNFGHEGEKGNKDDNGVGKTLAIIIGIVTLIILLVVFLAFVGK 287

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NKQ9|CRR15_ARATH Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=2 SV=1

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/252 (38%), Positives = 157/252 (62%), Gaps = 11/252 (4%)

Query: 40  FVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTI----MGSSPQDVVYGLYQ 95
           F++GGC+ +KYTP++ +ESN ++ L+S+V S++ +S+N+F +      SS    V+GLYQ
Sbjct: 29  FIYGGCSPEKYTPNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFGLYQ 88

Query: 96  CRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKC 155
           CR DL   DC+ C+  +V Q+  +C    G +LQL+GC+++Y+   FLG  D ++ +KKC
Sbjct: 89  CRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRYKKC 148

Query: 156 -GPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAI 214
              SV  + D   RRD VL  L +    Y+V  +  V+G AQCVGDLS  +C  CL +++
Sbjct: 149 SSKSVENDYDFFKRRDDVLSDLESTQLGYKVSRSGLVEGYAQCVGDLSPSDCTACLAESV 208

Query: 215 GRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGE--KTFAIIVGLLAGV 272
           G+LK+ CG+A   +++L +CY RY      + Y D +   +N     K+ AIIVG++AG 
Sbjct: 209 GKLKNLCGSAVAAEVYLAQCYARY----WGSGYYDFSSDPTNGDHVGKSIAIIVGVIAGF 264

Query: 273 ALIIIFLTFIRK 284
           A++++ L+  R 
Sbjct: 265 AILVVLLSLCRN 276

Arabidopsis thaliana (taxid: 3702)

>sp|O22784|CRR11_ARATH Cysteine-rich repeat secretory protein 11 OS=Arabidopsis thaliana GN=CRRSP11 PE=2 SV=2

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 143/300 (47%), Gaps = 30/300 (10%)

Query: 10  STTSLLLLFSFIIVFLSIPSFSSSSSST-DSFVFGGCAQQKYT-PSSAYESNLNSLLTSL 67
           S   LLLL+  I+   S    + SSS    + ++ GCA+Q+ + PS  Y   L+++   L
Sbjct: 5   SLKQLLLLYIIIMALFSDLKLAKSSSPEYTNLIYKGCARQRLSDPSGLYSQALSAMYGLL 64

Query: 68  VNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGA 127
           V  +T + +   T   +S   V  GL+QCRGDLS  DC  CV+R     G LC +     
Sbjct: 65  VTQSTKTRFYKTTTGTTSQTSVT-GLFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAAR 123

Query: 128 LQLQGCYVKYDNATFLGVEDKTVVFKKCGPS----VGYEPDAMGRRD---AVLQGLMTAS 180
           +QL GCY+ Y+ + F  +    ++FK CG +     G+E     RRD    V+Q  +   
Sbjct: 124 VQLSGCYLLYEISGFAQISGMELLFKTCGKNNVAGTGFEQ----RRDTAFGVMQNGVVQG 179

Query: 181 GPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYST 240
             +       V  L QC GD+   +C  C+  A+ R + +CG++  G ++L KC+V YS 
Sbjct: 180 HGFYATTYESVYVLGQCEGDIGDSDCSGCIKNALQRAQVECGSSISGQIYLHKCFVGYSF 239

Query: 241 GKAPNSYKDHNDKSSNEGE--------------KTFAIIVGLLAGVALIIIFLTFIRKVF 286
              PN     +    + G               KT AIIVG  AGV  ++I L F++ + 
Sbjct: 240 --YPNGVPKRSSPYPSSGSSGSSSSSSSSGTTGKTVAIIVGGTAGVGFLVICLLFVKNLM 297

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NM73|CRR3_ARATH Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=2 SV=1

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 36/306 (11%)

Query: 8   TTSTTSLLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYT-PSSAYESNLNSLLTS 66
           + S  S++++   +   L++   S+++  T + ++ GCA+Q+++ PS  Y   L+++  S
Sbjct: 4   SISFLSIIMMMCLLFPDLNVVVKSATTEYT-TLIYKGCARQQFSDPSGLYSQALSAMFGS 62

Query: 67  LVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGG 126
           LV+ +T + +  +     +    + GL+QCRGDLS  DC  CV+R       LC +    
Sbjct: 63  LVSQSTKTRF--YKTTTGTSTTTITGLFQCRGDLSNHDCYNCVSRLPVLSDKLCGKTIAS 120

Query: 127 ALQLQGCYVKYDNATFLGVEDKTVVFKKCGPS----VGYEPDAMGRRD---AVLQGLMTA 179
            +QL GCY+ Y+ + F  +    ++FK CG +     G+E     RRD    V+Q  + +
Sbjct: 121 RVQLSGCYLLYEVSGFSQISGMEMLFKTCGKNNIAGTGFEE----RRDTAFGVMQNGVVS 176

Query: 180 SGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYS 239
              +       V  L QC GD+   +C  C+  A+ + + +CG++  G ++L KC++ YS
Sbjct: 177 GHGFYATTYESVYVLGQCEGDVGDTDCSGCVKNALEKAQVECGSSISGQIYLHKCFIAYS 236

Query: 240 TGKAPNSYKDH-----------------NDKSSNEGE--KTFAIIVGLLAGVALIIIFLT 280
               PN                      +D S++ G   KT AIIVG  AGV  ++I L 
Sbjct: 237 --YYPNGVPRRSSSSSSSSSSSSSGSSNSDPSTSTGATGKTVAIIVGGAAGVGFLVICLL 294

Query: 281 FIRKVF 286
           F + + 
Sbjct: 295 FAKNLM 300

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXV7|CRR56_ARATH Cysteine-rich repeat secretory protein 56 OS=Arabidopsis thaliana GN=CRRSP56 PE=1 SV=2

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 129/265 (48%), Gaps = 21/265 (7%)

Query: 39  SFVFGGCAQQKYT-PSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCR 97
           + +F GCA QK   P+  +  NL +L TSLV+ ++ SS+ + T  G+     V G++QCR
Sbjct: 27  NLIFKGCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVT-SGTDNTTAVIGVFQCR 85

Query: 98  GDLSMPDCATCVARAVTQVGGLCY--QDCGGAL----QLQGCYVKYDNATFLGVEDKTVV 151
           GDL    C  CV++    V  LC   +D G  +     L GCY++Y+++ F       ++
Sbjct: 86  GDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQTSGTEML 145

Query: 152 FKKCGPSVGYEPDAMGRRDAVL----QGLMTASGP-------YRVGGARDVQGLAQCVGD 200
           F+ CG     +P  +G+R+        G+ T S         +  G    V  L QC G 
Sbjct: 146 FRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQCEGS 205

Query: 201 LSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYS--TGKAPNSYKDHNDKSSNEG 258
           L   +C +C+     + KS+CG ++ G ++L KC+V YS  +   PN       +     
Sbjct: 206 LGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSYSYYSHGVPNIEPLSGGEKRQHT 265

Query: 259 EKTFAIIVGLLAGVALIIIFLTFIR 283
           E+T A+ VG +  +  +I+ L  +R
Sbjct: 266 ERTIALAVGGVFVLGFVIVCLLVLR 290

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Q0E2|CRR9_ARATH Cysteine-rich repeat secretory protein 9 OS=Arabidopsis thaliana GN=CRRSP9 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 26/245 (10%)

Query: 21  IIVFLSIPSFS--------SSSSSTDSFVFGGC-AQQKYTPSSAYESNLNSLLTSLVNSA 71
           II+ L+IP F           + S    +F  C     +T +S+YE+N ++LL SL  S+
Sbjct: 4   IIITLTIPLFYFFFFSLLSHQTMSQPDHIFTVCNPTNNFTQTSSYETNRDTLLASLRESS 63

Query: 72  TYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQ 131
           +   Y+N T  G SP D V+G++ CRGD++   C  CV  A T++   C  +    +   
Sbjct: 64  SLGHYSNAT-EGLSP-DTVHGMFLCRGDITTASCVDCVQTATTEIASNCTLNKRAVIYYD 121

Query: 132 GCYVKYDNATFLG----VEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASG--PYRV 185
            C V+Y N +F      V   T+   +  P+       +  + + L   +++S   PY V
Sbjct: 122 ECMVRYSNVSFSSELEIVPSITIYSLRSAPNPTRFNQTLTEKFSELIFNVSSSSLVPYFV 181

Query: 186 ---------GGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYV 236
                     G+ D+  + QC  DL    C  CL  A  R+ + CG   Y  +F  KC +
Sbjct: 182 EDQERVTQSEGSYDLDTMVQCSPDLDIFNCTVCLRVAFFRISTCCGLPSYAKIFTPKCLL 241

Query: 237 RYSTG 241
           R+ T 
Sbjct: 242 RFQTS 246

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SH43|CRR5_ARATH Putative cysteine-rich repeat secretory protein 5 OS=Arabidopsis thaliana GN=CRRSP5 PE=3 SV=1

 Score = 89.0 bits (219), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 24/247 (9%)

Query: 20  FIIVFLSIPSFSSSSSSTDSFVFGGCAQ-QKYTPSSAYESNLNSLLTSLVNSATYSSYNN 78
           F +      SFS  + S  S +   C Q    T +S+Y SN +++L++L N ++  SY+N
Sbjct: 8   FAVALFCFFSFSLRAMSQASQMLIDCTQFDNVTRTSSYLSNRDTVLSTLRNRSSIGSYSN 67

Query: 79  FTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYD 138
            T  G SP + +YG++ CRGDL+   C+ CV     ++   C+      +    C V+Y 
Sbjct: 68  AT-AGLSP-NTIYGMFLCRGDLNRTSCSDCVNATTLEIYKSCFYRKSALVISNECIVRYS 125

Query: 139 NATFLG-VED--KTVVFKKCGPSVG----YEPDAMGRRDA-VLQGLMTASGPY------- 183
           N +F   VED   T  F   G S+     +    + + DA +L+  +++S P        
Sbjct: 126 NVSFFTLVEDVPSTARFST-GNSLDSPQFFSQTLLEKLDALILRASLSSSLPVPYFVDDQ 184

Query: 184 ----RVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYS 239
               ++ G+ D+  + QC  DL    C  CL  A+ RL   C  A +  +F  KC + Y 
Sbjct: 185 QHVTQLEGSYDLHAMVQCSPDLDPRNCTVCLRLAVQRLSGCCSHAQFARIFYTKCLITYE 244

Query: 240 -TGKAPN 245
            +   PN
Sbjct: 245 ISALQPN 251

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRJ9|CRR38_ARATH Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 23/247 (9%)

Query: 10  STTSLLLLFSFIIVFLSIPSFSS--SSSSTDSFVFGGCA--QQKYTPSSAYESNLNSLLT 65
           S+   ++ F  + + + I S  +  S S  ++F+F  C+  +  +T  S YESNLN+L +
Sbjct: 2   SSLKRIVWFPILAIAIQILSIHTVLSQSQNNAFLFHKCSDIEGSFTSKSLYESNLNNLFS 61

Query: 66  SL---VNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQ 122
            L   V S  +++    +  G++P +V  GL  CRGD S  DC +C+  A+ ++   C  
Sbjct: 62  QLSYKVPSTGFAA----SSTGNTPNNV-NGLALCRGDASSSDCRSCLETAIPELRQRCPN 116

Query: 123 DCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGP 182
           +  G +    C VKY +  F G  D    F         +P     +   L   +T    
Sbjct: 117 NKAGIVWYDNCLVKYSSTNFFGKIDFENRFYLYNVKNVSDPSTFNSQTKALLTELTKKAT 176

Query: 183 YRVG-----------GARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFL 231
            R             G   + GL QC  DL +  C+ CL   IG L + C   + G +  
Sbjct: 177 TRDNQKLFATGEKNIGKNKLYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVG 236

Query: 232 GKCYVRY 238
           G C  RY
Sbjct: 237 GSCNFRY 243

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
224079505	312	predicted protein [Populus trichocarpa]	0.958	0.894	0.744	1e-118
255580365	282	DUF26 domain-containing protein 1 precur	0.865	0.893	0.809	1e-116
449466997	282	PREDICTED: cysteine-rich repeat secretor	0.965	0.996	0.738	1e-115
224065134	285	predicted protein [Populus trichocarpa]	0.876	0.894	0.785	1e-111
225451371	283	PREDICTED: cysteine-rich repeat secretor	0.876	0.901	0.768	1e-109
147779860	314	hypothetical protein VITISV_021208 [Viti	0.859	0.796	0.776	1e-109
357491961	278	Cysteine-rich repeat secretory protein [	0.934	0.978	0.665	1e-100
297801296	295	hypothetical protein ARALYDRAFT_493742 [	0.879	0.867	0.687	8e-98
356569379	281	PREDICTED: cysteine-rich repeat secretor	0.958	0.992	0.639	1e-97
30693130	288	cysteine-rich repeat secretory protein 6	0.934	0.944	0.683	3e-97

>gi|224079505|ref|XP_002305881.1| predicted protein [Populus trichocarpa] gi|222848845|gb|EEE86392.1| predicted protein [Populus trichocarpa]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/290 (74%), Positives = 243/290 (83%), Gaps = 11/290 (3%)

Query: 9   TSTTSLLLLFSFIIVF--LSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTS 66
           T+++SLLL F+FI+    L+ PS S+S   TD+FVFGGC QQKY   S +ESNLNSLLTS
Sbjct: 4   TTSSSLLLTFTFIVSLSSLTCPSLSAS---TDAFVFGGCTQQKYVQDSPFESNLNSLLTS 60

Query: 67  LVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGG 126
           LVNSATYSSYNN+TIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAV+Q+G LC Q CGG
Sbjct: 61  LVNSATYSSYNNYTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVSQLGVLCAQTCGG 120

Query: 127 ALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVG 186
           ALQLQGCYVKYDN TFLGVEDKTVV KKCGPSVGY+ DAM  RDAVL GL    G YRVG
Sbjct: 121 ALQLQGCYVKYDNTTFLGVEDKTVVLKKCGPSVGYDTDAMNLRDAVLGGLARTGGAYRVG 180

Query: 187 GARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNS 246
           G+ DVQG+AQC+GDLS GECQDCL +AI RLKSDCGTADYGDMFL KCY RY+TG  P+ 
Sbjct: 181 GSGDVQGVAQCIGDLSTGECQDCLSEAIMRLKSDCGTADYGDMFLAKCYARYTTG-GPHV 239

Query: 247 YK-----DHNDKSSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK 291
           Y       H DKS+++GEKTFAII+GLLAGVAL+IIFL+F+RKVFG +GK
Sbjct: 240 YTKSHSGKHTDKSTSDGEKTFAIIIGLLAGVALLIIFLSFLRKVFGGNGK 289

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580365|ref|XP_002531010.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus communis] gi|223529408|gb|EEF31370.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/252 (80%), Positives = 223/252 (88%)

Query: 40  FVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQCRGD 99
           FVFGGC QQKYTP+S YESN+NSLLTSLVNSATY+SYNNFTIMGS+PQDVVYGL+QCRGD
Sbjct: 31  FVFGGCTQQKYTPNSPYESNINSLLTSLVNSATYTSYNNFTIMGSTPQDVVYGLFQCRGD 90

Query: 100 LSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSV 159
           LSMPDCATCVARAV+Q+G LC Q CGGA+QLQGCYVKYDNATFLGVEDKT+V KKCGPS+
Sbjct: 91  LSMPDCATCVARAVSQLGSLCSQTCGGAVQLQGCYVKYDNATFLGVEDKTIVLKKCGPSI 150

Query: 160 GYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKS 219
           GY+ DAM  RDAV  GL+ A GPYR+GG+ +VQG+AQCVGDLS GECQDCL +AI RLKS
Sbjct: 151 GYDTDAMSVRDAVFAGLVRAGGPYRIGGSGEVQGVAQCVGDLSLGECQDCLSEAIERLKS 210

Query: 220 DCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALIIIFL 279
           DCGTA YGDMFL KCY RYSTG A    K HNDKS+NEGEKTFAII+GLLAGVALIIIFL
Sbjct: 211 DCGTAVYGDMFLAKCYARYSTGGAQVYTKSHNDKSTNEGEKTFAIIIGLLAGVALIIIFL 270

Query: 280 TFIRKVFGEHGK 291
           TFIRKVF   GK
Sbjct: 271 TFIRKVFEGSGK 282

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466997|ref|XP_004151212.1| PREDICTED: cysteine-rich repeat secretory protein 60-like [Cucumis sativus]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/283 (73%), Positives = 235/283 (83%), Gaps = 2/283 (0%)

Query: 9   TSTTSLLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLV 68
           T   S LL+  F + F  +P FS S+   D+FVFGGC Q +Y+P+S YESNLNSLLTSLV
Sbjct: 2   TPLRSQLLILLFGLSFSFLPFFSLSA--IDTFVFGGCTQLRYSPNSGYESNLNSLLTSLV 59

Query: 69  NSATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGAL 128
           NSATYSSYNN+TI GSSPQD + GLYQCRGDLSMPDCATC+ARAVTQ+GGLC   CGGAL
Sbjct: 60  NSATYSSYNNYTIQGSSPQDALSGLYQCRGDLSMPDCATCIARAVTQLGGLCSDTCGGAL 119

Query: 129 QLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGA 188
           QL+GCYVKYDN++FLGVEDKTVV KKCGPSVGYE +AMGRRDAVL  L+ ASG YRVGGA
Sbjct: 120 QLEGCYVKYDNSSFLGVEDKTVVLKKCGPSVGYEEEAMGRRDAVLGALVGASGGYRVGGA 179

Query: 189 RDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYK 248
             VQG+AQCVGDLS  ECQDCL +AIGRLKSDCGTAD+GDMFLGKCY RY+T   P   K
Sbjct: 180 GKVQGVAQCVGDLSGSECQDCLGEAIGRLKSDCGTADFGDMFLGKCYARYNTHGPPVFSK 239

Query: 249 DHNDKSSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK 291
            H+DKS+ +GEKTFAII+GLLAGVAL+IIFL FIRKVF   GK
Sbjct: 240 AHHDKSNGDGEKTFAIIIGLLAGVALVIIFLVFIRKVFERSGK 282

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065134|ref|XP_002301685.1| predicted protein [Populus trichocarpa] gi|222843411|gb|EEE80958.1| predicted protein [Populus trichocarpa]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/257 (78%), Positives = 222/257 (86%), Gaps = 2/257 (0%)

Query: 36  STDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQ 95
           STD+FV GGC Q+KY   S YESNLNSLLTSLVNSATYSSYNN+TIMGSS QDVVYGLYQ
Sbjct: 30  STDAFVIGGCTQEKYVQDSPYESNLNSLLTSLVNSATYSSYNNYTIMGSSTQDVVYGLYQ 89

Query: 96  CRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKC 155
           CRGDLSMPDCATCVARAV+Q+G LC Q CGGALQLQGCYVKYDN TFLGVEDKTVV KKC
Sbjct: 90  CRGDLSMPDCATCVARAVSQLGVLCAQTCGGALQLQGCYVKYDNTTFLGVEDKTVVLKKC 149

Query: 156 GPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIG 215
           GPSVGY+ DAM  RDAVL  L   SG YRVGG+ +VQG+AQCVGDLS  ECQDCL +AIG
Sbjct: 150 GPSVGYDTDAMNLRDAVLGSLAGTSGLYRVGGSGNVQGVAQCVGDLSVEECQDCLSEAIG 209

Query: 216 RLKSDCGTADYGDMFLGKCYVRYSTGKAPNSY-KDHNDKSSNEGEKTFAIIVGLLAGVAL 274
           RLKSDCGTADYGDMFL KCY RY+TG  P++Y K H+DK +N+GEKTFAIIVG+LAGVAL
Sbjct: 210 RLKSDCGTADYGDMFLAKCYARYTTG-GPHAYSKAHSDKYTNDGEKTFAIIVGILAGVAL 268

Query: 275 IIIFLTFIRKVFGEHGK 291
           +IIFL F+ KVFG +GK
Sbjct: 269 VIIFLAFLGKVFGGNGK 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451371|ref|XP_002263857.1| PREDICTED: cysteine-rich repeat secretory protein 60-like [Vitis vinifera]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/255 (76%), Positives = 219/255 (85%)

Query: 37  TDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQC 96
            D FVF GC+Q KYTP+S YESNL+S+LTSL NSATYS+YNNFTIMGSSPQDVVYGLYQC
Sbjct: 29  NDDFVFMGCSQIKYTPNSPYESNLDSVLTSLANSATYSTYNNFTIMGSSPQDVVYGLYQC 88

Query: 97  RGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCG 156
           RGDLSMPDCATCVARAV+Q+G LC Q CGGALQLQGC+VKYDN TFLGVEDKTVV KKCG
Sbjct: 89  RGDLSMPDCATCVARAVSQLGSLCSQTCGGALQLQGCFVKYDNDTFLGVEDKTVVLKKCG 148

Query: 157 PSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGR 216
           PSVGYE + MGRRDAVL  +  +SG YRVGG+ DVQG+AQCVGDLS GECQDC+ +AI R
Sbjct: 149 PSVGYEAERMGRRDAVLGSMGASSGGYRVGGSGDVQGVAQCVGDLSVGECQDCVSEAISR 208

Query: 217 LKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALII 276
           LK+DCGTA YGDMFLGKCY RY+T  A      ++D S ++GEKTFAIIVGLLAGVALII
Sbjct: 209 LKTDCGTAVYGDMFLGKCYARYTTAGAHTYAHPNHDSSHDDGEKTFAIIVGLLAGVALII 268

Query: 277 IFLTFIRKVFGEHGK 291
           IFLTF+RKVF  +GK
Sbjct: 269 IFLTFMRKVFEGNGK 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779860|emb|CAN72513.1| hypothetical protein VITISV_021208 [Vitis vinifera]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/250 (77%), Positives = 216/250 (86%)

Query: 37  TDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGSSPQDVVYGLYQC 96
            D FVF GC+Q KYTP+S YESNL+S+LTSL NSATYS+YNNFTIMGSSPQDVVYGLYQC
Sbjct: 29  NDDFVFMGCSQIKYTPNSPYESNLDSVLTSLANSATYSTYNNFTIMGSSPQDVVYGLYQC 88

Query: 97  RGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCG 156
           RGDLSMPDCATCVARAV+Q+G LC Q CGGALQLQGC+VKYDN TFLGVEDKTVV KKCG
Sbjct: 89  RGDLSMPDCATCVARAVSQLGSLCSQTCGGALQLQGCFVKYDNDTFLGVEDKTVVLKKCG 148

Query: 157 PSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGR 216
           PSVGYE + MGRRDAVL  +  +SG YRVGG+ DVQG+AQCVGDLS GECQDC+ +AI R
Sbjct: 149 PSVGYEAERMGRRDAVLGSMGASSGGYRVGGSGDVQGVAQCVGDLSVGECQDCVSEAISR 208

Query: 217 LKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALII 276
           LK+DCGTA YGDMFLGKCY RY+T  A      ++D S ++GEKTFAIIVGLLAGVALII
Sbjct: 209 LKTDCGTAVYGDMFLGKCYARYTTAGAHTYAHPNHDSSHDDGEKTFAIIVGLLAGVALII 268

Query: 277 IFLTFIRKVF 286
           IFLTF+RKVF
Sbjct: 269 IFLTFMRKVF 278

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357491961|ref|XP_003616268.1| Cysteine-rich repeat secretory protein [Medicago truncatula] gi|355517603|gb|AES99226.1| Cysteine-rich repeat secretory protein [Medicago truncatula]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/278 (66%), Positives = 225/278 (80%), Gaps = 6/278 (2%)

Query: 14  LLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATY 73
           ++ LFS   +FLS+    S SS+T+ +++GGC QQ YTP+S YESNLNSLLTSLVNSATY
Sbjct: 7   IIFLFS-TTLFLSL----SESSTTNLYLYGGCTQQMYTPNSPYESNLNSLLTSLVNSATY 61

Query: 74  SSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGC 133
           SSYNNFT++GS+ QD++YGLYQCRGDL+MPDCA+CVARAVT+ G +C   CGG +QL GC
Sbjct: 62  SSYNNFTVLGSTQQDIIYGLYQCRGDLAMPDCASCVARAVTRAGDMCRDTCGGTVQLDGC 121

Query: 134 YVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQG 193
            VKYDNATFLGVEDK V+ KKCGPSVGY P+AMG RDAVL GL+   GP+RVGG+  V+G
Sbjct: 122 LVKYDNATFLGVEDKNVLLKKCGPSVGYNPEAMGSRDAVLGGLVGLGGPFRVGGSGMVRG 181

Query: 194 LAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDK 253
           +AQC GDLS GECQDC+V+AIGRLKSDCGTADYGD+FLGKCY RYSTG A ++ K H  K
Sbjct: 182 VAQCTGDLSFGECQDCVVEAIGRLKSDCGTADYGDLFLGKCYARYSTGGAHDTSKAHG-K 240

Query: 254 SSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK 291
              EGEK FA+I+GLLAG A+++I + F+ K+    GK
Sbjct: 241 FGIEGEKRFALIIGLLAGAAILVILIAFLTKICRRQGK 278

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801296|ref|XP_002868532.1| hypothetical protein ARALYDRAFT_493742 [Arabidopsis lyrata subsp. lyrata] gi|297314368|gb|EFH44791.1| hypothetical protein ARALYDRAFT_493742 [Arabidopsis lyrata subsp. lyrata]

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 176/256 (68%), Positives = 206/256 (80%)

Query: 16  LLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSS 75
           L F F ++  + PS SS++S+TD+FVFGGC+QQK++P+SAYESNLNSLLTSLVNSATYSS
Sbjct: 11  LSFFFFLLAATAPSLSSATSATDTFVFGGCSQQKFSPASAYESNLNSLLTSLVNSATYSS 70

Query: 76  YNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYV 135
           YNNFTIMGSS  D  +GL+QCRGDLSMPDCATCV RAV+QVG LC   CGGALQL GCY+
Sbjct: 71  YNNFTIMGSSSSDTAHGLFQCRGDLSMPDCATCVVRAVSQVGPLCPFTCGGALQLAGCYI 130

Query: 136 KYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLA 195
           KYDN +FLG EDKTVV KKCGPS GY  D + RRDAVL  L+   G +R GG+ DVQG+ 
Sbjct: 131 KYDNISFLGQEDKTVVLKKCGPSEGYNTDGISRRDAVLTELVNGGGYFRAGGSGDVQGMG 190

Query: 196 QCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSS 255
           QCVGDL+  ECQDCL  AIGRLK+DCGTA +GDMFL KCY RYST  A +  K H+ K++
Sbjct: 191 QCVGDLTVSECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYSTDGAQHYAKSHSYKTN 250

Query: 256 NEGEKTFAIIVGLLAG 271
             GE+TFAII+GLLAG
Sbjct: 251 YGGERTFAIIIGLLAG 266

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569379|ref|XP_003552879.1| PREDICTED: cysteine-rich repeat secretory protein 60-like [Glycine max]

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 181/283 (63%), Positives = 216/283 (76%), Gaps = 4/283 (1%)

Query: 10  STTSLLLLFSFIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVN 69
           + T L LL   II F +  S    SS  D F++GGC QQ+YT +S YESNLNSLLTSLVN
Sbjct: 2   AKTKLTLL---IISFFTTFSVVCLSSPADFFLYGGCTQQRYTSNSPYESNLNSLLTSLVN 58

Query: 70  SATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQ 129
           SATYSSYNN T++GSS  D VYGLYQCRGDL+MPDCA CV+RAV++ G LC   CGGA+Q
Sbjct: 59  SATYSSYNNLTVVGSSQSDAVYGLYQCRGDLAMPDCAACVSRAVSRAGQLCPATCGGAVQ 118

Query: 130 LQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGAR 189
           L GC++KYDN TFLGVEDKTVV K+CGPSVG+ P   G RDAV+ GL  + G +RVGG+ 
Sbjct: 119 LDGCFIKYDNVTFLGVEDKTVVLKRCGPSVGFGPVGSGERDAVMGGLAGSGGYFRVGGSG 178

Query: 190 DVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYST-GKAPNSYK 248
           DV+G+AQC GDLS  ECQDC+  AI RL+S+C  ADYGD+FLGKCY R+ST G    +Y 
Sbjct: 179 DVKGVAQCCGDLSFAECQDCVGDAIRRLRSECAAADYGDVFLGKCYARFSTNGAHAYNYN 238

Query: 249 DHNDKSSNEGEKTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK 291
             + KS NEGEKTFAIIVGLLAGVA++IIFL F+R++   HGK
Sbjct: 239 KAHGKSGNEGEKTFAIIVGLLAGVAILIIFLAFLRRICEGHGK 281

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30693130|ref|NP_198582.2| cysteine-rich repeat secretory protein 60 [Arabidopsis thaliana] gi|63025162|gb|AAY27054.1| At5g37660 [Arabidopsis thaliana] gi|332006832|gb|AED94215.1| cysteine-rich repeat secretory protein 60 [Arabidopsis thaliana]

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 186/272 (68%), Positives = 215/272 (79%)

Query: 20  FIIVFLSIPSFSSSSSSTDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSSYNNF 79
           F ++  + PS SS++S+TD+FVFGGC+QQK++P+SAYESNLNSLLTSLVNSATYSSYNNF
Sbjct: 17  FFLIAATAPSLSSATSATDTFVFGGCSQQKFSPASAYESNLNSLLTSLVNSATYSSYNNF 76

Query: 80  TIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDN 139
           TIMGSS  D   GL+QCRGDLSMPDCATCVARAV+QVG LC   CGGALQL GCY+KYDN
Sbjct: 77  TIMGSSSSDTARGLFQCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDN 136

Query: 140 ATFLGVEDKTVVFKKCGPSVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVG 199
            +FLG EDKTVV KKCG S GY  D + RRDAVL  L+   G +R GG+ DVQG+ QCVG
Sbjct: 137 ISFLGQEDKTVVLKKCGSSEGYNTDGISRRDAVLTELVNGGGYFRAGGSGDVQGMGQCVG 196

Query: 200 DLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGE 259
           DL+  ECQDCL  AIGRLK+DCGTA +GDMFL KCY RYST  A +  K HN K++  GE
Sbjct: 197 DLTVSECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYSTDGAQHYAKSHNYKTNYGGE 256

Query: 260 KTFAIIVGLLAGVALIIIFLTFIRKVFGEHGK 291
           KTFAII+GLLA V L+IIFL F+R V    GK
Sbjct: 257 KTFAIIIGLLAAVVLLIIFLLFLRGVCSRGGK 288

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
TAIR|locus:2151709	298	PDLP7 "plasmodesmata-located p	0.852	0.832	0.649	2.1e-84
TAIR|locus:2065450	288	PDLP6 "AT2G01660" [Arabidopsis	0.852	0.861	0.560	1.6e-70
TAIR|locus:2033614	299	HWI1 "HOPW1-1-INDUCED GENE1" [	0.824	0.802	0.428	7e-54
TAIR|locus:2101811	279	PDLP8 "AT3G60720" [Arabidopsis	0.821	0.856	0.365	1.5e-42
TAIR|locus:2018314	307	PDLP2 "AT1G04520" [Arabidopsis	0.718	0.680	0.303	1.1e-29
TAIR|locus:2051089	304	PDLP3 "AT2G33330" [Arabidopsis	0.810	0.776	0.334	2.7e-29
TAIR|locus:2031311	284	AT1G63570 "AT1G63570" [Arabido	0.683	0.700	0.259	1.1e-16
TAIR|locus:2172492	303	PDLP1 "plasmodesmata-located p	0.618	0.594	0.260	1.4e-16
TAIR|locus:2031341	324	AT1G63550 [Arabidopsis thalian	0.649	0.583	0.271	9.8e-16
TAIR|locus:2166091	263	AT5G48540 "AT5G48540" [Arabido	0.536	0.593	0.306	6.9e-15

TAIR|locus:2151709 PDLP7 "plasmodesmata-located protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
 Identities = 161/248 (64%), Positives = 183/248 (73%)

Query:    43 GGCAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSM 102
             GGC+QQK++P+SAYE             ATYSSYNNFTIMGSS  D   GL+QCRGDLSM
Sbjct:    40 GGCSQQKFSPASAYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSDTARGLFQCRGDLSM 99

Query:   103 PDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGYE 162
             PDCATCVARAV+QVG LC   CGGALQL GCY+KYDN +FLG EDKTVV KKCG S GY 
Sbjct:   100 PDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKTVVLKKCGSSEGYN 159

Query:   163 PDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCG 222
              D + RRDAVL  L+   G +R GG+ DVQG+ QCVGDL+  ECQDCL  AIGRLK+DCG
Sbjct:   160 TDGISRRDAVLTELVNGGGYFRAGGSGDVQGMGQCVGDLTVSECQDCLGTAIGRLKNDCG 219

Query:   223 TADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALIIIFLTFI 282
             TA +GDMFL KCY RYST  A +  K HN K++  GEKTFAII+GLLA V L+IIFL F+
Sbjct:   220 TAVFGDMFLAKCYARYSTDGAQHYAKSHNYKTNYGGEKTFAIIIGLLAAVVLLIIFLLFL 279

Query:   283 RKVFGEHG 290
             R V    G
Sbjct:   280 RGVCSRGG 287

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2065450 PDLP6 "AT2G01660" [Arabidopsis thaliana (taxid:3702)]

 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 144/257 (56%), Positives = 179/257 (69%)

Query:    43 GGCAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMG-SSPQDVVYGLYQCRGDLS 101
             GGC+Q+KY P S YE             A+  +YNNFT  G S     VYGLYQCRGDLS
Sbjct:    30 GGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNFTTNGISGDSSSVYGLYQCRGDLS 89

Query:   102 MP--DCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSV 159
                 DCA CVARAV+++G LC    GGALQL+GC+VKYDN TFLGVEDKTVV ++CGP V
Sbjct:    90 SGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVEDKTVVVRRCGPPV 149

Query:   160 GYEPDAMGRRDAVLQGLMTASG-PYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLK 218
             GY  D M RRD+V+  L  +SG  YRVG + ++QG+AQC GDLSA ECQDCL++AIGRL+
Sbjct:   150 GYNSDEMTRRDSVVGSLAASSGGSYRVGVSGELQGVAQCTGDLSATECQDCLMEAIGRLR 209

Query:   219 SDCGTADYGDMFLGKCYVRYST--GKA-PNSYK-DHNDKSSNEGEKTFAIIVGLLAGVAL 274
             +DCG A +GD++L KCY RYS   G +  N Y  + N+   +E EKT AIIVGL+AGV L
Sbjct:   210 TDCGGAAWGDVYLAKCYARYSARGGHSRANGYGGNRNNNDDDEIEKTLAIIVGLIAGVTL 269

Query:   275 IIIFLTFIRKVFGEHGK 291
             +++FL+F+ K   E GK
Sbjct:   270 LVVFLSFMAKSC-ERGK 285

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2033614 HWI1 "HOPW1-1-INDUCED GENE1" [Arabidopsis thaliana (taxid:3702)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 108/252 (42%), Positives = 149/252 (59%)

Query:    45 CAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVV--YGLYQCRGDLSM 102
             C+  K++PSS YE                + Y NFT+    P+  V  YG+YQCRGDL  
Sbjct:    36 CSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVTVYGIYQCRGDLDP 95

Query:   103 PDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVGY- 161
               C+TCV+ AV QVG LC     G LQ++ C ++YDN +FLGV+DKT++  KCG  + + 
Sbjct:    96 TACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKTLILNKCGQPMEFN 155

Query:   162 EPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDC 221
             + DA+ +   V+  L T  G YR GG  +VQG+AQC GDLS  +CQDCL  AIGRLKSDC
Sbjct:   156 DQDALTKASDVIGSLGTGDGSYRTGGNGNVQGVAQCSGDLSTSQCQDCLSDAIGRLKSDC 215

Query:   222 GTADYGDMFLGKCYVRYSTG-----KAPNSYKDHNDKSSNEGE----KTFAIIVGLLAGV 272
             G A  G ++L KCY R+S G     + P     H  +  N+ +    KT AII+G++  +
Sbjct:   216 GMAQGGYVYLSKCYARFSVGGSHARQTPGPNFGHEGEKGNKDDNGVGKTLAIIIGIVTLI 275

Query:   273 ALIIIFLTFIRK 284
              L+++FL F+ K
Sbjct:   276 ILLVVFLAFVGK 287

GO:0005576 "extracellular region" evidence=ISM

GO:0051707 "response to other organism" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2101811 PDLP8 "AT3G60720" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 90/246 (36%), Positives = 142/246 (57%)

Query:    43 GGCAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTI----MGSSPQDVVYGLYQCRG 98
             GGC+ +KYTP++ +E             ++ +S+N+F +      SS    V+GLYQCR 
Sbjct:    32 GGCSPEKYTPNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFGLYQCRD 91

Query:    99 DLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGP- 157
             DL   DC+ C+  +V Q+  +C    G +LQL+GC+++Y+   FLG  D ++ +KKC   
Sbjct:    92 DLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRYKKCSSK 151

Query:   158 SVGYEPDAMGRRDAVLQGLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRL 217
             SV  + D   RRD VL  L +    Y+V  +  V+G AQCVGDLS  +C  CL +++G+L
Sbjct:   152 SVENDYDFFKRRDDVLSDLESTQLGYKVSRSGLVEGYAQCVGDLSPSDCTACLAESVGKL 211

Query:   218 KSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKTFAIIVGLLAGVALIII 277
             K+ CG+A   +++L +CY RY  G     +        + G K+ AIIVG++AG A++++
Sbjct:   212 KNLCGSAVAAEVYLAQCYARY-WGSGYYDFSSDPTNGDHVG-KSIAIIVGVIAGFAILVV 269

Query:   278 FLTFIR 283
              L+  R
Sbjct:   270 LLSLCR 275

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2018314 PDLP2 "AT1G04520" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
 Identities = 69/227 (30%), Positives = 110/227 (48%)

Query:    44 GCAQQKYT-PSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSM 102
             GCA+Q+++ PS  Y              +T + +   T  G+S   +  GL+QCRGDLS 
Sbjct:    39 GCARQQFSDPSGLYSQALSAMFGSLVSQSTKTRFYK-TTTGTSTTTIT-GLFQCRGDLSN 96

Query:   103 PDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPS---- 158
              DC  CV+R       LC +     +QL GCY+ Y+ + F  +    ++FK CG +    
Sbjct:    97 HDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGFSQISGMEMLFKTCGKNNIAG 156

Query:   159 VGYEPDAMGRRDA---VLQ-GLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAI 214
              G+E     RRD    V+Q G+++  G Y       V  L QC GD+   +C  C+  A+
Sbjct:   157 TGFEE----RRDTAFGVMQNGVVSGHGFYATT-YESVYVLGQCEGDVGDTDCSGCVKNAL 211

Query:   215 GRLKSDCGTADYGDMFLGKCYVRYSTGKAPNSYKDHNDKSSNEGEKT 261
              + + +CG++  G ++L KC++ YS    PN     +  SS+    +
Sbjct:   212 EKAQVECGSSISGQIYLHKCFIAYSY--YPNGVPRRSSSSSSSSSSS 256

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2051089 PDLP3 "AT2G33330" [Arabidopsis thaliana (taxid:3702)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 88/263 (33%), Positives = 130/263 (49%)

Query:    44 GCAQQKYT-PSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSM 102
             GCA+Q+ + PS  Y              +T + +   T  G++ Q  V GL+QCRGDLS 
Sbjct:    40 GCARQRLSDPSGLYSQALSAMYGLLVTQSTKTRFYK-TTTGTTSQTSVTGLFQCRGDLSN 98

Query:   103 PDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPS---- 158
              DC  CV+R     G LC +     +QL GCY+ Y+ + F  +    ++FK CG +    
Sbjct:    99 NDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFAQISGMELLFKTCGKNNVAG 158

Query:   159 VGYEPDAMGRRDA---VLQ-GLMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAI 214
              G+E     RRD    V+Q G++   G Y       V  L QC GD+   +C  C+  A+
Sbjct:   159 TGFEQ----RRDTAFGVMQNGVVQGHGFYATT-YESVYVLGQCEGDIGDSDCSGCIKNAL 213

Query:   215 GRLKSDCGTADYGDMFLGKCYVRYS---TG--KAPNSYKDH-----NDKSSNEGE--KTF 262
              R + +CG++  G ++L KC+V YS    G  K  + Y        +  SS+ G   KT 
Sbjct:   214 QRAQVECGSSISGQIYLHKCFVGYSFYPNGVPKRSSPYPSSGSSGSSSSSSSSGTTGKTV 273

Query:   263 AIIVGLLAGVALIIIFLTFIRKV 285
             AIIVG  AGV  ++I L F++ +
Sbjct:   274 AIIVGGTAGVGFLVICLLFVKNL 296

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2031311 AT1G63570 "AT1G63570" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 56/216 (25%), Positives = 94/216 (43%)

Query:    45 CAQQKYTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPD 104
             C+   +T +S+YE             ++   Y N TI G SP D VYG++ CRGD++   
Sbjct:    33 CSVDSFTQTSSYETNRNILLTTLSLTSSLVHYLNATI-GLSP-DTVYGMFLCRGDINTTS 90

Query:   105 CATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLG-VEDKTVVFK---KCGPSVG 160
             C+ CV  A  ++   C  +    +    C V+Y N +F    E K V+ +   +  P+  
Sbjct:    91 CSDCVQTAAIEIATNCTLNKRAFIYYDECMVRYSNVSFFSEFESKPVIVRYSLRSAPNSN 150

Query:   161 -YEPDAMGRRDAVLQGLMTASG-PY---------RVGGARDVQGLAQCVGDLSAGECQDC 209
              +      + D ++  +  ++  PY         ++ G+ D+  + QC  DL    C  C
Sbjct:   151 RFNQTLSNKLDQLIPNVSPSTLIPYFVEDQERVTQLEGSYDLVSMIQCSPDLDPSNCTIC 210

Query:   210 LVQAIGRLKSDCGTADYGDMFLGKCYVRYSTGKAPN 245
             L  A   + + CG      +F  KC +RY T   P+
Sbjct:   211 LRFAYATVSTCCGVPSSALIFTPKCILRYRTFVLPS 246

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2172492 PDLP1 "plasmodesmata-located protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 51/196 (26%), Positives = 91/196 (46%)

Query:   104 DCATCVARAVTQVGGLCYQD---CGGALQLQGCYVKYDNATFLGVEDKTVVFKKCGPSVG 160
             DC + + + V+++ G    D       + L GCY++Y+++ F       ++F+ CG    
Sbjct:    95 DCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQTSGTEMLFRVCGKKDS 154

Query:   161 YEPDAMGRRDAVL----QGLMTAS-------GPYRVGGARDVQGLAQCVGDLSAGECQDC 209
              +P  +G+R+        G+ T S       G +  G    V  L QC G L   +C +C
Sbjct:   155 NDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQCEGSLGNSDCGEC 214

Query:   210 LVQAIGRLKSDCGTADYGDMFLGKCYVRYS--TGKAPNSYKDHNDKSSNEGEKTFAIIVG 267
             +     + KS+CG ++ G ++L KC+V YS  +   PN       +     E+T A+ VG
Sbjct:   215 VKDGFEKAKSECGESNSGQVYLQKCFVSYSYYSHGVPNIEPLSGGEKRQHTERTIALAVG 274

Query:   268 LLAGVALIIIFLTFIR 283
              +  +  +I+ L  +R
Sbjct:   275 GVFVLGFVIVCLLVLR 290

GO:0005576 "extracellular region" evidence=ISM

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 56/206 (27%), Positives = 90/206 (43%)

Query:    50 YTPSSAYEXXXXXXXXXXXXXATYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCV 109
             +T +S+YE             ++   Y+N T  G SP D V+G++ CRGD++   C  CV
Sbjct:    42 FTQTSSYETNRDTLLASLRESSSLGHYSNAT-EGLSP-DTVHGMFLCRGDITTASCVDCV 99

Query:   110 ARAVTQVGGLCYQDCGGALQLQGCYVKYDNATFLG----VEDKTVVFKKCGPSVGYEPDA 165
               A T++   C  +    +    C V+Y N +F      V   T+   +  P+       
Sbjct:   100 QTATTEIASNCTLNKRAVIYYDECMVRYSNVSFSSELEIVPSITIYSLRSAPNPTRFNQT 159

Query:   166 MGRRDAVLQGLMTASG--PY------RVG---GARDVQGLAQCVGDLSAGECQDCLVQAI 214
             +  + + L   +++S   PY      RV    G+ D+  + QC  DL    C  CL  A 
Sbjct:   160 LTEKFSELIFNVSSSSLVPYFVEDQERVTQSEGSYDLDTMVQCSPDLDIFNCTVCLRVAF 219

Query:   215 GRLKSDCGTADYGDMFLGKCYVRYST 240
              R+ + CG   Y  +F  KC +R+ T
Sbjct:   220 FRISTCCGLPSYAKIFTPKCLLRFQT 245

GO:0005576 "extracellular region" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2166091 AT5G48540 "AT5G48540" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 56/183 (30%), Positives = 81/183 (44%)

Query:    72 TYSSYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQ 131
             T SSYNN        ++ VYGL QCRGD+S  DC+TC+  A  ++  +C       +   
Sbjct:    64 TSSSYNN--------KEKVYGLAQCRGDISNTDCSTCIQDAAKKIREVCQNQSDSRILYD 115

Query:   132 GCYVKYDNATFLGVEDK---TVVF----------KKCGPSVGYEPDAMGRRDAVL---QG 175
              C+++Y    F+G  D     + F          KK    +G   D + R +AVL   +G
Sbjct:   116 FCFLRYSQENFIGKLDTGAGLIYFNVANVTEIDPKKFDNELGALFDKI-RSEAVLPKNKG 174

Query:   176 LMTASGPYRVGGARDVQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCY 235
             L    G  ++     + GL QC  DLS  +C  C   A+G   + C       +    CY
Sbjct:   175 L--GKGKTKLTPFVTLNGLVQCTRDLSELDCAQCFATAVGSFMTTCHNKKGCRVLYSSCY 232

Query:   236 VRY 238
             VRY
Sbjct:   233 VRY 235

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0080167 "response to karrikin" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0WPN8	CRR60_ARATH	No assigned EC number	0.6972	0.8625	0.8422	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	291
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	3e-21
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	6e-11

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 86.0 bits (213), Expect = 3e-21
 Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 50  YTPSSAYESNLNSLLTSLVNSATYSSYNNFTIMGS-SPQDVVYGLYQCRGDLSMPDCATC 108
            T +S +ESNLN+LL+SL ++A  SS   F    S +  D VYGL QCRGDLS  DC +C
Sbjct: 13  TTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSC 72

Query: 109 VARAVTQVGGLCYQDCGGALQLQGCYVKYDNATF 142
           +A AV+++   C    GG +    C+++Y++  F
Sbjct: 73  LATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 57.8 bits (140), Expect = 6e-11
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query: 191 VQGLAQCVGDLSAGECQDCLVQAIGRLKSDCGTADYGDMFLGKCYVRYS 239
           V GLAQC GDLSA +C+ CL  A+  L+  C     G ++   C++RY 
Sbjct: 54  VYGLAQCRGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYE 102

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.91
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.86
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	95.78
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	94.66
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	94.28
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	91.85
PF15102	146	TMEM154: TMEM154 protein family	91.14
PF14610	189	DUF4448: Protein of unknown function (DUF4448)	89.07
PF11857	74	DUF3377: Domain of unknown function (DUF3377); Int	86.9
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	86.69
PF01299	306	Lamp: Lysosome-associated membrane glycoprotein (L	82.08
PF12669	58	P12: Virus attachment protein p12 family	80.65
PF05568	189	ASFV_J13L: African swine fever virus J13L protein;	80.16

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.91  E-value=8.8e-25  Score=172.45  Aligned_cols=99  Identities=42%  Similarity=0.784  Sum_probs=76.6

Q ss_pred             ccCCC---CCCC-CCCchHHHHHHHHHHHHHhhhccC---CceeEEEeCCCCCccEEEEEecCCCCChhchHHHHHHHHH
Q 022862           42 FGGCA---QQKY-TPSSAYESNLNSLLTSLVNSATYS---SYNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVT  114 (291)
Q Consensus        42 ~~~C~---~~~~-t~~s~f~~nl~~ll~~L~~~a~~~---~f~~~~~~~g~~~~~vYglaqCr~Dls~~~C~~Cl~~a~~  114 (291)
                      |+.|+   .+++ +++++|++|++.||..|..+++..   +|++++.  |.+++++|||+||++|+++++|..||+.++.
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~--~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~   78 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSA--GSGPDTVYGLAQCRGDLSPSDCRACLADAVA   78 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE----ST---EEEEEEE-TTS-HHHHHHHHHHHHC
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeec--CCCCCeEEEEEEcCCCCChhhhHHHHHHHHH
Confidence            67898   3566 567889999999999999998763   7888875  6788999999999999999999999999999


Q ss_pred             hhcccccCCceEEEEcCceeeeeeccee
Q 022862          115 QVGGLCYQDCGGALQLQGCYVKYDNATF  142 (291)
Q Consensus       115 ~~~~~C~~~~~a~i~~d~C~lRYs~~~F  142 (291)
                      .+++.|+.+++|+||+++|+||||+++|
T Consensus        79 ~~~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   79 NISSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             CHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHHHhCCCCceEEEECCCEEEEEECCCC
Confidence            9999999999999999999999999988

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.86  E-value=1e-21  Score=154.87  Aligned_cols=92  Identities=28%  Similarity=0.576  Sum_probs=68.5

Q ss_pred             eeccC-C--CCC--CchhHhHHHHHHHHHHHhc---C--CCceec----CCCcEEEEEEccCCCChhhHHHHHHHHHHHh
Q 022862          152 FKKCG-P--SVG--YEPDAMGRRDAVLQGLMTA---S--GPYRVG----GARDVQGLAQCVGDLSAGECQDCLVQAIGRL  217 (291)
Q Consensus       152 ~~~c~-~--~~~--~~~~f~~~l~~ll~~l~~~---~--~~f~~~----~~~~vYglaQC~~DLs~~dC~~CL~~a~~~i  217 (291)
                      |+.|+ +  .+.  .++.|+.+++++|..|...   .  .+|+.+    +.++||||+||++||++++|..||+.++.++
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~   80 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI   80 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence            45677 2  222  2456999999999999743   2  367764    4568999999999999999999999999999


Q ss_pred             hhcCCCCcccEEEecceeEEeecCCC
Q 022862          218 KSDCGTADYGDMFLGKCYVRYSTGKA  243 (291)
Q Consensus       218 ~~~C~~~~gg~v~~~~C~lRYe~~~F  243 (291)
                      +++|++++||+|++++|+||||+++|
T Consensus        81 ~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   81 SSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHhCCCCceEEEECCCEEEEEECCCC
Confidence            99999999999999999999999998

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=95.78  E-value=0.0027  Score=51.12  Aligned_cols=33  Identities=27%  Similarity=0.535  Sum_probs=21.2

Q ss_pred             CCCcEEEEeeHHHHHHHHHHHHHHHH-HHHhhcc
Q 022862          257 EGEKTFAIIVGLLAGVALIIIFLTFI-RKVFGEH  289 (291)
Q Consensus       257 ~~~~~~~ivv~vv~~~~~~~~~~~~~-~~~~~~~  289 (291)
                      +...++.||+||++++++++++++|+ ||++||.
T Consensus        62 s~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk~   95 (122)
T PF01102_consen   62 SEPAIIGIIFGVMAGVIGIILLISYCIRRLRKKS   95 (122)
T ss_dssp             S-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred             cccceeehhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            34558889999999988777655554 5555553

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=94.66  E-value=0.025  Score=36.41  Aligned_cols=8  Identities=13%  Similarity=0.252  Sum_probs=3.5

Q ss_pred             EEEeeHHH
Q 022862          262 FAIIVGLL  269 (291)
Q Consensus       262 ~~ivv~vv  269 (291)
                      +++++|++
T Consensus        15 ~~VvVPV~   22 (40)
T PF08693_consen   15 VGVVVPVG   22 (40)
T ss_pred             EEEEechH
Confidence            33345544

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=94.28  E-value=0.034  Score=35.18  Aligned_cols=23  Identities=43%  Similarity=0.742  Sum_probs=17.9

Q ss_pred             cEEEEeeHHHHHHHHHHHHHHHH
Q 022862          260 KTFAIIVGLLAGVALIIIFLTFI  282 (291)
Q Consensus       260 ~~~~ivv~vv~~~~~~~~~~~~~  282 (291)
                      .+++||++|+++++++++++.++
T Consensus         4 s~IaIIv~V~vg~~iiii~~~~Y   26 (38)
T PF02439_consen    4 STIAIIVAVVVGMAIIIICMFYY   26 (38)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHH
Confidence            46889999999988887766543

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=91.85  E-value=0.12  Score=40.01  Aligned_cols=22  Identities=18%  Similarity=0.110  Sum_probs=14.5

Q ss_pred             CCCCCcEEEEeeHHHHHHHHHH
Q 022862          255 SNEGEKTFAIIVGLLAGVALII  276 (291)
Q Consensus       255 ~~~~~~~~~ivv~vv~~~~~~~  276 (291)
                      +.+.+.+..|+|++++.+.+|+
T Consensus        62 ~ls~gaiagi~vg~~~~v~~lv   83 (96)
T PTZ00382         62 GLSTGAIAGISVAVVAVVGGLV   83 (96)
T ss_pred             CcccccEEEEEeehhhHHHHHH
Confidence            3445668888888776655444

>PF15102 TMEM154: TMEM154 protein family

Probab=91.14  E-value=0.14  Score=42.41  Aligned_cols=15  Identities=27%  Similarity=0.405  Sum_probs=9.5

Q ss_pred             EEEEeeHHHHHHHHH
Q 022862          261 TFAIIVGLLAGVALI  275 (291)
Q Consensus       261 ~~~ivv~vv~~~~~~  275 (291)
                      ++.|+||.|+.++++
T Consensus        58 iLmIlIP~VLLvlLL   72 (146)
T PF15102_consen   58 ILMILIPLVLLVLLL   72 (146)
T ss_pred             EEEEeHHHHHHHHHH
Confidence            788888855444433

>PF14610 DUF4448: Protein of unknown function (DUF4448)

Probab=89.07  E-value=0.25  Score=42.71  Aligned_cols=29  Identities=21%  Similarity=0.291  Sum_probs=19.7

Q ss_pred             CCcEEEEeeHHHHHHHHHHHHHHHHHHHh
Q 022862          258 GEKTFAIIVGLLAGVALIIIFLTFIRKVF  286 (291)
Q Consensus       258 ~~~~~~ivv~vv~~~~~~~~~~~~~~~~~  286 (291)
                      +...++|+||+++++++++++++++|+|+
T Consensus       156 ~~~~laI~lPvvv~~~~~~~~~~~~~~R~  184 (189)
T PF14610_consen  156 GKYALAIALPVVVVVLALIMYGFFFWNRK  184 (189)
T ss_pred             cceeEEEEccHHHHHHHHHHHhhheeecc
Confidence            34489999999987776665555555433

>PF11857 DUF3377: Domain of unknown function (DUF3377); InterPro: IPR021805 This domain is functionally uncharacterised and found at the C terminus of peptidases belonging to MEROPS peptidase family M10A, membrane-type matrix metallopeptidases (clan MA)

Probab=86.90  E-value=0.85  Score=33.33  Aligned_cols=28  Identities=7%  Similarity=0.326  Sum_probs=20.9

Q ss_pred             CCCCcEEEEeeHHHHHHHHHHHHHHHHH
Q 022862          256 NEGEKTFAIIVGLLAGVALIIIFLTFIR  283 (291)
Q Consensus       256 ~~~~~~~~ivv~vv~~~~~~~~~~~~~~  283 (291)
                      .+..+.++||||.+.+++++++++.++.
T Consensus        26 ~~~~~avaVviPl~L~LCiLvl~yai~~   53 (74)
T PF11857_consen   26 GGTVNAVAVVIPLVLLLCILVLIYAIFQ   53 (74)
T ss_pred             CCceeEEEEeHHHHHHHHHHHHHHHhhe
Confidence            3445689999999988888877666553

; GO: 0004222 metalloendopeptidase activity

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=86.69  E-value=0.2  Score=35.58  Aligned_cols=21  Identities=29%  Similarity=0.569  Sum_probs=0.0

Q ss_pred             EEEEeeHHHHHHHHHHHHHHH
Q 022862          261 TFAIIVGLLAGVALIIIFLTF  281 (291)
Q Consensus       261 ~~~ivv~vv~~~~~~~~~~~~  281 (291)
                      ..++|.|+|+++++.++.+.|
T Consensus        11 laavIaG~Vvgll~ailLIlf   31 (64)
T PF01034_consen   11 LAAVIAGGVVGLLFAILLILF   31 (64)
T ss_dssp             ---------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            456666666665555443333

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>PF01299 Lamp: Lysosome-associated membrane glycoprotein (Lamp); InterPro: IPR002000 Lysosome-associated membrane glycoproteins (lamp) [] are integral membrane proteins, specific to lysosomes, and whose exact biological function is not yet clear

Probab=82.08  E-value=0.37  Score=44.87  Aligned_cols=28  Identities=14%  Similarity=0.260  Sum_probs=16.1

Q ss_pred             CcEEEEeeHHHHHHHHHHHHHHHHHHHh
Q 022862          259 EKTFAIIVGLLAGVALIIIFLTFIRKVF  286 (291)
Q Consensus       259 ~~~~~ivv~vv~~~~~~~~~~~~~~~~~  286 (291)
                      ..++.|+||++++++++|++++|+..||
T Consensus       270 ~~~vPIaVG~~La~lvlivLiaYli~Rr  297 (306)
T PF01299_consen  270 SDLVPIAVGAALAGLVLIVLIAYLIGRR  297 (306)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhheeEec
Confidence            4567777777666555555455443333

Structurally, the lamp proteins consist of two internally homologous lysosome-luminal domains separated by a proline-rich hinge region; at the C-terminal extremity there is a transmembrane region (TM) followed by a very short cytoplasmic tail (C). In each of the duplicated domains, there are two conserved disulphide bonds. This structure is schematically represented in the figure below. +-----+ +-----+ +-----+ +-----+ | | | | | | | | xCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxxxCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxx +--------------------------++Hinge++--------------------------++TM++C+ In mammals, there are two closely related types of lamp: lamp-1 and lamp-2, which form major components of the lysosome membrane. In chicken lamp-1 is known as LEP100. Also included in this entry is the macrophage protein CD68 (or macrosialin) [] is a heavily glycosylated integral membrane protein whose structure consists of a mucin-like domain followed by a proline-rich hinge; a single lamp-like domain; a transmembrane region and a short cytoplasmic tail. Similar to CD68, mammalian lamp-3, which is expressed in lymphoid organs, dendritic cells and in lung, contains all the C-terminal regions but lacks the N-terminal lamp-like region []. In a lamp-family protein from nematodes [] only the part C-terminal to the hinge is conserved. ; GO: 0016020 membrane

>PF12669 P12: Virus attachment protein p12 family

Probab=80.65  E-value=2.7  Score=29.28  Aligned_cols=7  Identities=43%  Similarity=1.070  Sum_probs=3.1

Q ss_pred             EeeHHHH
Q 022862          264 IIVGLLA  270 (291)
Q Consensus       264 ivv~vv~  270 (291)
                      |||++++
T Consensus         2 iII~~Ii    8 (58)
T PF12669_consen    2 IIIGIII    8 (58)
T ss_pred             eeHHHHH
Confidence            4444443

>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ]

Probab=80.16  E-value=1  Score=37.30  Aligned_cols=30  Identities=10%  Similarity=0.338  Sum_probs=19.0

Q ss_pred             cEEEEeeHHHHHHHHHHHHHHHHHHHhhcc
Q 022862          260 KTFAIIVGLLAGVALIIIFLTFIRKVFGEH  289 (291)
Q Consensus       260 ~~~~ivv~vv~~~~~~~~~~~~~~~~~~~~  289 (291)
                      ....|+++|++.++++++.++|.-+|+||+
T Consensus        30 hm~tILiaIvVliiiiivli~lcssRKkKa   59 (189)
T PF05568_consen   30 HMYTILIAIVVLIIIIIVLIYLCSSRKKKA   59 (189)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence            345577788777776666666665555553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	291
3a2e_A	108	Crystal Structure Of Ginkbilobin-2, The Novel Antif		5e-04

>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 83  GSSPQDVVYGLYQCRGDLSMPDCATCVARAVTQVGGLCYQDCGGALQLQGCYVKYDNATF 142
           GS      YG   C+  +S  DC  C++  V ++  +C    G  +QL  C+++Y+  +F
Sbjct: 49  GSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	291
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	1e-31
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	2e-10

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.95
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.94
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.89
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.87
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	94.68
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	93.89
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	93.4
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	92.56

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.95  E-value=4.9e-28  Score=190.64  Aligned_cols=105  Identities=28%  Similarity=0.655  Sum_probs=94.7

Q ss_pred             CCcccccCCCCCCCCCCchHHHHHHHHHHHHHhhhccCC--ceeEEEeCCCCCccEEEEEecCCCCChhchHHHHHHHHH
Q 022862           37 TDSFVFGGCAQQKYTPSSAYESNLNSLLTSLVNSATYSS--YNNFTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVT  114 (291)
Q Consensus        37 ~~~~~~~~C~~~~~t~~s~f~~nl~~ll~~L~~~a~~~~--f~~~~~~~g~~~~~vYglaqCr~Dls~~~C~~Cl~~a~~  114 (291)
                      .+.++++.|+.++++++++|++||+.||+.|+++++.++  |++... ++.++++||||+|||||+++++|..||+.|+.
T Consensus         2 ~t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~-~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~   80 (108)
T 3a2e_A            2 NTAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRA-GSGGAPTAYGRATCKQSISQSDCTACLSNLVN   80 (108)
T ss_dssp             CCCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEEC-CSTTCCCEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred             CcceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeec-cCCCCceEEEEEEEcCCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999987743  444443 24566899999999999999999999999999


Q ss_pred             hhcccccCCceEEEEcCceeeeeeccee
Q 022862          115 QVGGLCYQDCGGALQLQGCYVKYDNATF  142 (291)
Q Consensus       115 ~~~~~C~~~~~a~i~~d~C~lRYs~~~F  142 (291)
                      ++++.||++++|+||+++|+||||+++|
T Consensus        81 ~~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           81 RIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             THHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999999998

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.89  E-value=4.4e-23  Score=162.27  Aligned_cols=96  Identities=25%  Similarity=0.415  Sum_probs=81.4

Q ss_pred             ceeeeeccCCCCCC-chhHhHHHHHHHHHHHhc---CC-Cceec-----CCCcEEEEEEccCCCChhhHHHHHHHHHHHh
Q 022862          148 KTVVFKKCGPSVGY-EPDAMGRRDAVLQGLMTA---SG-PYRVG-----GARDVQGLAQCVGDLSAGECQDCLVQAIGRL  217 (291)
Q Consensus       148 ~~~~~~~c~~~~~~-~~~f~~~l~~ll~~l~~~---~~-~f~~~-----~~~~vYglaQC~~DLs~~dC~~CL~~a~~~i  217 (291)
                      +..+++.|++.+.. ++.|+.+++.||..|+..   ++ .|+.+     +.++||||+||++||++++|+.||+.++.++
T Consensus         3 t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~   82 (108)
T 3a2e_A            3 TAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRI   82 (108)
T ss_dssp             CCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTH
T ss_pred             cceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            44567789876544 578999999999999753   22 33331     3458999999999999999999999999999


Q ss_pred             hhcCCCCcccEEEecceeEEeecCCC
Q 022862          218 KSDCGTADYGDMFLGKCYVRYSTGKA  243 (291)
Q Consensus       218 ~~~C~~~~gg~v~~~~C~lRYe~~~F  243 (291)
                      +++|++++||+||+++|+||||+++|
T Consensus        83 ~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           83 FSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHCCCCceEEEECCCEEEEEeCCcC
Confidence            99999999999999999999999998

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=94.68  E-value=0.012  Score=37.91  Aligned_cols=31  Identities=13%  Similarity=0.141  Sum_probs=15.7

Q ss_pred             EEEEeeHHHHHHHHH---HHHHHHHHHHhhccCC
Q 022862          261 TFAIIVGLLAGVALI---IIFLTFIRKVFGEHGK  291 (291)
Q Consensus       261 ~~~ivv~vv~~~~~~---~~~~~~~~~~~~~~~~  291 (291)
                      +-+|..+|+++++++   ++.++|++|+++++.|
T Consensus        10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k   43 (44)
T 2ks1_B           10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIVRK   43 (44)
T ss_dssp             SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred             cceEEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence            334666666544432   3344566666655444

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=93.89  E-value=0.012  Score=37.81  Aligned_cols=31  Identities=16%  Similarity=0.196  Sum_probs=15.4

Q ss_pred             EEEEeeHHHHHHHHH---HHHHHHHHHHhhccCC
Q 022862          261 TFAIIVGLLAGVALI---IIFLTFIRKVFGEHGK  291 (291)
Q Consensus       261 ~~~ivv~vv~~~~~~---~~~~~~~~~~~~~~~~  291 (291)
                      +-+|..+|+++++++   ++.++|++|++|++.|
T Consensus         9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~k   42 (44)
T 2l2t_A            9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKKK   42 (44)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred             cceEEEeehHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence            334666666544432   2344556666654443

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=93.40  E-value=0.012  Score=37.69  Aligned_cols=9  Identities=33%  Similarity=0.763  Sum_probs=5.2

Q ss_pred             EEEEeeHHH
Q 022862          261 TFAIIVGLL  269 (291)
Q Consensus       261 ~~~ivv~vv  269 (291)
                      +.++|||++
T Consensus        14 Ia~~vVGvl   22 (44)
T 2jwa_A           14 IISAVVGIL   22 (44)
T ss_dssp             HHHHHHHHH
T ss_pred             hHHHHHHHH
Confidence            555666644

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=92.56  E-value=0.011  Score=36.90  Aligned_cols=28  Identities=39%  Similarity=0.663  Sum_probs=17.6

Q ss_pred             CCCcEEEEeeHHHHHHHHHHHHHHHHHH
Q 022862          257 EGEKTFAIIVGLLAGVALIIIFLTFIRK  284 (291)
Q Consensus       257 ~~~~~~~ivv~vv~~~~~~~~~~~~~~~  284 (291)
                      +.+.+..||+++++++++++...+|+||
T Consensus         9 s~GaIAGiVvG~v~gv~li~~l~~~~~r   36 (38)
T 2k1k_A            9 TGGEIVAVIFGLLLGAALLLGILVFRSR   36 (38)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCceeeeehHHHHHHHHHHHHHHHHee
Confidence            3445677788888777766554455544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00