Citrus Sinensis ID: 022991

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAESS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccccccccHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHcccccHHHHHHcccccccccccccEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcHHHccccccccEHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccHHcHHcEEEEEEEEEccccccEEEEEEEEEEcccEEEcc
Coil and Loop (DISEMBL)
MRKRTVYAWGVALICFIVLMIvtpaipqseeyhdfadqrkffgipntlnvvsnfPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGvgssyyhlepndarlvwdrlpmtIAFTSIIAIFIIERIdehkgtvsLIPLLLAGVVSILYWsffddlrpyalvqfvpciaiplmaillppmythstyWLWAAGFYLLAKVEEamdkpiyrwthhivsGHTLKHLCAAMVPVFLTLMLAKRTIETERVSLLKTWRIRWtrrkendskvVESYECtytsvpvaess
Flexible Loop (DISEMBL)
MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKrtietervsllktwrirwtrrkendskvvesyectytsvpvaess
Low Complexity Region (SEG)
MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMtiaftsiiaifiiERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAESS
Disordered region (IsUnstruct)
****TVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYT********
Disordered Region (DISOPRED)
****TVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKRT*******************************CTYT*V******
Disordered Region (DISEMBL)
MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAESS
Disordered Region (DISPRO)
*RKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPV****
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAESS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
147837083	286	hypothetical protein VITISV_039116 [Viti	0.986	0.996	0.822	1e-142
225447957	286	PREDICTED: uncharacterized protein LOC10	0.986	0.996	0.826	1e-136
356525962	288	PREDICTED: uncharacterized protein LOC10	0.989	0.993	0.787	1e-133
356558487	288	PREDICTED: uncharacterized protein LOC10	0.989	0.993	0.780	1e-132
255638165	288	unknown [Glycine max]	0.989	0.993	0.780	1e-131
357445467	286	hypothetical protein MTR_2g006770 [Medic	0.982	0.993	0.801	1e-128
388514073	286	unknown [Medicago truncatula]	0.982	0.993	0.797	1e-127
255576758	323	conserved hypothetical protein [Ricinus	0.882	0.789	0.874	1e-125
449444695	288	PREDICTED: uncharacterized protein LOC10	0.989	0.993	0.763	1e-124
15223970	281	senescence associated protein 18 [Arabid	0.965	0.992	0.737	1e-118

>gi|147837083|emb|CAN77049.1| hypothetical protein VITISV_039116 [Vitis vinifera]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 237/288 (82%), Positives = 268/288 (93%), Gaps = 3/288 (1%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           MR+RT+Y WG+A++CF+VLMIVTPAIPQSE YHDFADQR+FFGIPNTLNV+SNFPFL++G
Sbjct: 1   MRRRTIYVWGLAILCFVVLMIVTPAIPQSEAYHDFADQREFFGIPNTLNVISNFPFLIVG 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           ++GLVLC+HGNYF L LQGELWGW  FFIGVAAVG+GSSYYHL+PNDARLVWDRLPMTIA
Sbjct: 61  LIGLVLCYHGNYFKLSLQGELWGWTFFFIGVAAVGIGSSYYHLKPNDARLVWDRLPMTIA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSIIAIF+IERIDE KGT+S++PLLL GV+SILYW FFDDLRPYALVQF+PCIAIPLMA
Sbjct: 121 FTSIIAIFVIERIDERKGTLSIVPLLLVGVISILYWRFFDDLRPYALVQFLPCIAIPLMA 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPPMYTHST+WLWAAGFYLLAKVEEA DKPIY+WTHHIVSGHTLKHLCAAMVPVFLTL
Sbjct: 181 ILLPPMYTHSTFWLWAAGFYLLAKVEEAEDKPIYKWTHHIVSGHTLKHLCAAMVPVFLTL 240

Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAES 288
           MLAKR+IETER SLLKTW+I WT+ KE++ KV     CTY++VP+ ES
Sbjct: 241 MLAKRSIETERQSLLKTWKISWTKVKEDEVKV---ETCTYSTVPIEES 285

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447957|ref|XP_002267621.1| PREDICTED: uncharacterized protein LOC100258355 [Vitis vinifera] gi|298204502|emb|CBI23777.3| unnamed protein product [Vitis vinifera]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/288 (82%), Positives = 268/288 (93%), Gaps = 3/288 (1%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           MR+RT+Y WG+A++CF+VLMIVTPAIPQSE YHDFADQR+FFGIPNTLNV+SNFPFL++G
Sbjct: 1   MRRRTIYVWGLAILCFVVLMIVTPAIPQSEAYHDFADQREFFGIPNTLNVISNFPFLIVG 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           ++GLVLC+HGNYF L LQGELWGW  FFIGVAAVG+GSSYYHL+PNDARLVWDRLPMTIA
Sbjct: 61  LIGLVLCYHGNYFKLSLQGELWGWTFFFIGVAAVGIGSSYYHLKPNDARLVWDRLPMTIA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSIIAIFIIERIDE KGT+S++PLLL GV+SILYW FFDDLRPYALVQF+PCIAIPLMA
Sbjct: 121 FTSIIAIFIIERIDERKGTLSIVPLLLVGVISILYWRFFDDLRPYALVQFLPCIAIPLMA 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPPMYTHST+WLWAAGFYLLAKVEEA DKPIY+WTHHIVSGHTLKHLCAAMVPVFLTL
Sbjct: 181 ILLPPMYTHSTFWLWAAGFYLLAKVEEAEDKPIYKWTHHIVSGHTLKHLCAAMVPVFLTL 240

Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAES 288
           MLAKR+IETER SLLKTW+I WT+ KE++ KV     CTY++VP+ ES
Sbjct: 241 MLAKRSIETERQSLLKTWKISWTKVKEDEVKV---ETCTYSTVPIEES 285

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525962|ref|XP_003531590.1| PREDICTED: uncharacterized protein LOC100810128 [Glycine max]

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 226/287 (78%), Positives = 253/287 (88%), Gaps = 1/287 (0%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           MRKRTVYAW VAL+CF+VLMIVTP+IPQS+EYHDFAD R F GIPN LNV+SNFPFLVIG
Sbjct: 1   MRKRTVYAWLVALLCFLVLMIVTPSIPQSQEYHDFADHRTFLGIPNALNVISNFPFLVIG 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           +VGLVLC+HGNYF L LQGELWGW CF++GVAAV VGSS+YHL+P+DARLVWDRLPMT+A
Sbjct: 61  LVGLVLCYHGNYFRLSLQGELWGWTCFYVGVAAVAVGSSFYHLKPDDARLVWDRLPMTVA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSI+AIFIIERIDE KGTVS+IPL+LAG++SI+YW FFDDLRPYALVQFVPCI IPLMA
Sbjct: 121 FTSIMAIFIIERIDERKGTVSIIPLVLAGIISIVYWRFFDDLRPYALVQFVPCIVIPLMA 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPPMYTHSTYWLWAAG YLLAKV EA D  IY WT HIVSGHTLKHL AAMVPVFLT 
Sbjct: 181 ILLPPMYTHSTYWLWAAGSYLLAKVLEATDDVIYEWTRHIVSGHTLKHLVAAMVPVFLTF 240

Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAE 287
           MLAKR++E ER SLLKTWR+ WT+ +E +S   ESY  +YT+V   E
Sbjct: 241 MLAKRSVEPERQSLLKTWRVSWTKFREGNSN-TESYSYSYTNVQAVE 286

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558487|ref|XP_003547538.1| PREDICTED: uncharacterized protein LOC100816173 [Glycine max]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/287 (78%), Positives = 252/287 (87%), Gaps = 1/287 (0%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           MRKR++YAW VAL+CF++LMIVTPAIPQS+EYHDFAD R F GIPN LNV+SNFPFLVIG
Sbjct: 1   MRKRSIYAWLVALVCFLLLMIVTPAIPQSQEYHDFADHRTFLGIPNALNVISNFPFLVIG 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           +VGLVLC HGNYF L LQGELWGW CF++GVAAV VGSSYYHL+P+DARLVWDRLPMT+A
Sbjct: 61  LVGLVLCHHGNYFRLSLQGELWGWTCFYVGVAAVAVGSSYYHLKPDDARLVWDRLPMTVA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSI+AIFIIERIDE KGTVS+IPL+LAG++SI+YW FFDDLRPYALVQFVPCI IPLMA
Sbjct: 121 FTSIMAIFIIERIDERKGTVSIIPLVLAGIISIVYWRFFDDLRPYALVQFVPCIVIPLMA 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPPMYTHSTYWLWAAG YLLAKV EA D  IY W  HIVSGHTLKHL AAMVPVFLT 
Sbjct: 181 ILLPPMYTHSTYWLWAAGSYLLAKVLEATDDVIYEWAQHIVSGHTLKHLVAAMVPVFLTF 240

Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAE 287
           MLAKR++E ER SLLKTWR+ WT+ +E +S  +ESY  +YT+V   E
Sbjct: 241 MLAKRSVEPERQSLLKTWRVSWTKFREGNSN-IESYSYSYTNVQAVE 286

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638165|gb|ACU19396.1| unknown [Glycine max]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/287 (78%), Positives = 252/287 (87%), Gaps = 1/287 (0%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           MRKRTVYAW VAL+CF+VLMIVTP+IPQS+EYHDFAD R F GIPN LNV+SNFPFLVIG
Sbjct: 1   MRKRTVYAWLVALLCFLVLMIVTPSIPQSQEYHDFADHRTFLGIPNALNVISNFPFLVIG 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           +VG VLC+HGNYF L LQGELWGW CF++GVAAV VGSS+YHL+P+DARLVWDRLPMT+A
Sbjct: 61  LVGPVLCYHGNYFRLSLQGELWGWTCFYVGVAAVAVGSSFYHLKPDDARLVWDRLPMTVA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSI+AIFIIERIDE KGTVS+IPL+LAG++SI+YW FFDDLRPYALVQFVPCI IPLMA
Sbjct: 121 FTSIMAIFIIERIDERKGTVSIIPLVLAGIISIVYWRFFDDLRPYALVQFVPCIVIPLMA 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPP+YTHSTYWLWAAG YLLAKV EA D  IY WT HIVSGHTLKHL AAMVPVFLT 
Sbjct: 181 ILLPPIYTHSTYWLWAAGSYLLAKVLEATDDVIYEWTRHIVSGHTLKHLVAAMVPVFLTF 240

Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAE 287
           MLAKR++E ER SLLKTWR+ WT+ +E +S   ESY  +YT+V   E
Sbjct: 241 MLAKRSVEPERQSLLKTWRVSWTKFREGNSN-TESYSYSYTNVQAVE 286

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445467|ref|XP_003593011.1| hypothetical protein MTR_2g006770 [Medicago truncatula] gi|217073746|gb|ACJ85233.1| unknown [Medicago truncatula] gi|355482059|gb|AES63262.1| hypothetical protein MTR_2g006770 [Medicago truncatula]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/287 (80%), Positives = 255/287 (88%), Gaps = 3/287 (1%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           MRKR VYAW VALICFIVLMIVTPAIPQS++YH+FADQR FFGIPN LNV+SNFPFL+IG
Sbjct: 1   MRKRVVYAWAVALICFIVLMIVTPAIPQSQDYHNFADQRTFFGIPNALNVISNFPFLIIG 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           ++GLVLC HGNYF L LQGELWGW CF++GVAAVG+GSSYYHL+P+DA LVWDRLPMT+A
Sbjct: 61  LIGLVLCHHGNYFKLSLQGELWGWTCFYVGVAAVGIGSSYYHLKPDDASLVWDRLPMTVA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSIIAIFIIERIDE KG +S+IPL+LAGV+SI+YW FFDDLRPYAL+QFVPCIAIPLMA
Sbjct: 121 FTSIIAIFIIERIDERKGMISIIPLVLAGVISIVYWRFFDDLRPYALIQFVPCIAIPLMA 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPPMYTHSTYWLWAAGFYLLAKV EA D  +Y+WTHHIVSGHTLKHL AAMVPVFLT 
Sbjct: 181 ILLPPMYTHSTYWLWAAGFYLLAKVLEATDDVVYKWTHHIVSGHTLKHLFAAMVPVFLTF 240

Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAE 287
           MLAKR++E ER SL K WRI WT+ KE DS  VESY  TY+ V V E
Sbjct: 241 MLAKRSVEPERQSLFKVWRISWTKVKEGDSN-VESY--TYSRVEVEE 284

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514073|gb|AFK45098.1| unknown [Medicago truncatula]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/287 (79%), Positives = 254/287 (88%), Gaps = 3/287 (1%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           MRKR VYAW VALICFIVLMIVTPAIPQS++YH+FADQR FFGIPN LNV+SNFPFL+ G
Sbjct: 1   MRKRVVYAWAVALICFIVLMIVTPAIPQSQDYHNFADQRTFFGIPNALNVISNFPFLING 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           ++GLVLC HGNYF L LQGELWGW CF++GVAAVG+GSSYYHL+P+DA LVWDRLPMT+A
Sbjct: 61  LIGLVLCHHGNYFKLSLQGELWGWTCFYVGVAAVGIGSSYYHLKPDDASLVWDRLPMTVA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSIIAIFIIERIDE KG +S+IPL+LAGV+SI+YW FFDDLRPYAL+QFVPCIAIPLMA
Sbjct: 121 FTSIIAIFIIERIDERKGMISIIPLVLAGVISIVYWRFFDDLRPYALIQFVPCIAIPLMA 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPPMYTHSTYWLWAAGFYLLAKV EA D  +Y+WTHHIVSGHTLKHL AAMVPVFLT 
Sbjct: 181 ILLPPMYTHSTYWLWAAGFYLLAKVLEATDDVVYKWTHHIVSGHTLKHLFAAMVPVFLTF 240

Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAE 287
           MLAKR++E ER SL K WRI WT+ KE DS  VESY  TY+ V V E
Sbjct: 241 MLAKRSVEPERQSLFKVWRISWTKVKEGDSN-VESY--TYSRVEVEE 284

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576758|ref|XP_002529266.1| conserved hypothetical protein [Ricinus communis] gi|223531255|gb|EEF33098.1| conserved hypothetical protein [Ricinus communis]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/255 (87%), Positives = 241/255 (94%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           MR RT+ AWGVA++CFIVLMIVTP+IPQSEEYHDFADQR+FFGIPNTLNVVSNFPFLVIG
Sbjct: 1   MRNRTLLAWGVAILCFIVLMIVTPSIPQSEEYHDFADQREFFGIPNTLNVVSNFPFLVIG 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           +VGLVLCF+GNYF L LQGELWGW CFFIGVAAV  GS YYHL+PNDARLVWDRLPMT+A
Sbjct: 61  VVGLVLCFYGNYFKLSLQGELWGWTCFFIGVAAVAFGSGYYHLKPNDARLVWDRLPMTVA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSIIAIFIIERIDE KGT+S+IPL+LAG+VSI YW FFDDLRPYALVQFVPCIAIPLMA
Sbjct: 121 FTSIIAIFIIERIDERKGTISIIPLILAGIVSIAYWRFFDDLRPYALVQFVPCIAIPLMA 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPPMYTHS++WLWAAGFYLLAKVEEA DKPIYRWTHH+VSGHTLKHLCAAMVPVFLTL
Sbjct: 181 ILLPPMYTHSSFWLWAAGFYLLAKVEEATDKPIYRWTHHLVSGHTLKHLCAAMVPVFLTL 240

Query: 241 MLAKRTIETERVSLL 255
           MLAKR+IETER  L+
Sbjct: 241 MLAKRSIETERFLLV 255

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444695|ref|XP_004140109.1| PREDICTED: uncharacterized protein LOC101206038 [Cucumis sativus] gi|449511897|ref|XP_004164083.1| PREDICTED: uncharacterized LOC101206038 [Cucumis sativus]

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/287 (76%), Positives = 257/287 (89%), Gaps = 1/287 (0%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           M K T+YAW ++++CF+VLMIVTP+IPQS++YH FAD R+FFGIPNTLNVVSNFPFL+IG
Sbjct: 1   MNKSTIYAWLLSIVCFLVLMIVTPSIPQSQDYHHFADHRQFFGIPNTLNVVSNFPFLIIG 60

Query: 61  IVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIA 120
           ++GLVLC+H NYF L L+GEL+GW CF+IGVA V  GSSYYHLEPNDARLVWDRLPMTIA
Sbjct: 61  LIGLVLCYHENYFRLSLRGELYGWTCFYIGVALVAFGSSYYHLEPNDARLVWDRLPMTIA 120

Query: 121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLMA 180
           FTSII+IFIIERIDE+KGT+S+IPLLL G+VSILYW +FDDLRPYALVQFVPCIAIPLM 
Sbjct: 121 FTSIISIFIIERIDEYKGTLSIIPLLLVGIVSILYWCWFDDLRPYALVQFVPCIAIPLMT 180

Query: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL 240
           ILLPPMYTHSTYWLWAAGFYLLAKVEEA DK IY+WT+HIVSGHTLKHLCA+MVPVFLTL
Sbjct: 181 ILLPPMYTHSTYWLWAAGFYLLAKVEEASDKLIYKWTYHIVSGHTLKHLCASMVPVFLTL 240

Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAE 287
           MLAKRTIE ER SL K W++   + +++ +K VE+  C+++SVP+ E
Sbjct: 241 MLAKRTIEPERQSLYKIWKVTLMKFRDDKNK-VEASVCSFSSVPILE 286

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223970|ref|NP_177275.1| senescence associated protein 18 [Arabidopsis thaliana] gi|12323420|gb|AAG51683.1|AC016972_2 unknown protein; 59738-58353 [Arabidopsis thaliana] gi|208879514|gb|ACI31302.1| At1g71190 [Arabidopsis thaliana] gi|332197049|gb|AEE35170.1| senescence associated protein 18 [Arabidopsis thaliana]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/289 (73%), Positives = 247/289 (85%), Gaps = 10/289 (3%)

Query: 1   MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
           M+KRT+ AWG A++ FI+LMIVTP IPQS+ YH+FADQR F GIPN LNV+SNFPFL+IG
Sbjct: 1   MKKRTMSAWGSAILIFIILMIVTPTIPQSQAYHNFADQRSFLGIPNFLNVISNFPFLIIG 60

Query: 61  IVGLVLCFH-GNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTI 119
           ++GL+LCF+  +YF+  L+GE  GW CF+IGVAAV  GSSYYHL PNDA L+WDRLPMTI
Sbjct: 61  LIGLILCFYPEDYFSFSLRGEKIGWTCFYIGVAAVAFGSSYYHLHPNDATLLWDRLPMTI 120

Query: 120 AFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLM 179
           AFTSI+AIF+IERIDEHKGT S+ PLLLAG+VSILYW FFDDLRPYALVQFVPCI IPLM
Sbjct: 121 AFTSIMAIFVIERIDEHKGTYSIAPLLLAGLVSILYWRFFDDLRPYALVQFVPCIVIPLM 180

Query: 180 AILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLT 239
           AILLPPMYTHSTYWLWAAGFYLLAKVEEA DKPIY WTHHI+SGH+LKHLCAAMVPVFLT
Sbjct: 181 AILLPPMYTHSTYWLWAAGFYLLAKVEEAADKPIYSWTHHIISGHSLKHLCAAMVPVFLT 240

Query: 240 LMLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAES 288
           LMLAKRT++TER+SL KTW+    +  E      E +E +Y++V V E+
Sbjct: 241 LMLAKRTVQTERISLYKTWK----KGSEE-----ERFEHSYSNVAVEET 280

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
TAIR|locus:2026281	281	SAG18 "senescence associated g	0.965	0.992	0.698	2.9e-110
UNIPROTKB|Q60A70	262	MCA1000 "Putative uncharacteri	0.785	0.866	0.429	2.2e-41
UNIPROTKB|Q481Y3	268	CPS_2419 "Putative membrane pr	0.788	0.850	0.392	3.6e-41
TIGR_CMR|CPS_2419	268	CPS_2419 "putative membrane pr	0.788	0.850	0.392	3.6e-41
UNIPROTKB|Q83E22	263	CBU_0514 "Hypothetical membran	0.757	0.832	0.407	6.3e-37
TIGR_CMR|CBU_0514	263	CBU_0514 "membrane protein, pu	0.757	0.832	0.407	6.3e-37

TAIR|locus:2026281 SAG18 "senescence associated gene 18" [Arabidopsis thaliana (taxid:3702)]

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 202/289 (69%), Positives = 235/289 (81%)

Query:     1 MRKRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIG 60
             M+KRT+ AWG A++ FI+LMIVTP IPQS+ YH+FADQR F GIPN LNV+SNFPFL+IG
Sbjct:     1 MKKRTMSAWGSAILIFIILMIVTPTIPQSQAYHNFADQRSFLGIPNFLNVISNFPFLIIG 60

Query:    61 IVGLVLCFHG-NYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMXX 119
             ++GL+LCF+  +YF+  L+GE  GW CF+IGVAAV  GSSYYHL PNDA L+WDRLPM  
Sbjct:    61 LIGLILCFYPEDYFSFSLRGEKIGWTCFYIGVAAVAFGSSYYHLHPNDATLLWDRLPMTI 120

Query:   120 XXXXXXXXXXXERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQFVPCIAIPLM 179
                        ERIDEHKGT S+ PLLLAG+VSILYW FFDDLRPYALVQFVPCI IPLM
Sbjct:   121 AFTSIMAIFVIERIDEHKGTYSIAPLLLAGLVSILYWRFFDDLRPYALVQFVPCIVIPLM 180

Query:   180 AILLPPMYTHSTYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLT 239
             AILLPPMYTHSTYWLWAAGFYLLAKVEEA DKPIY WTHHI+SGH+LKHLCAAMVPVFLT
Sbjct:   181 AILLPPMYTHSTYWLWAAGFYLLAKVEEAADKPIYSWTHHIISGHSLKHLCAAMVPVFLT 240

Query:   240 LMLAKRTIETERVSLLKTWRIRWTRRKENDSKVVESYECTYTSVPVAES 288
             LMLAKRT++TER+SL KTW+      K ++    E +E +Y++V V E+
Sbjct:   241 LMLAKRTVQTERISLYKTWK------KGSEE---ERFEHSYSNVAVEET 280

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016811 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides" evidence=IEA

UNIPROTKB|Q60A70 MCA1000 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
 Identities = 103/240 (42%), Positives = 133/240 (55%)

Query:    21 IVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGE 80
             +  P IPQ   YH FAD    FGIPN  NVVSN PFL +G+ G++  + G    L   GE
Sbjct:    20 LFVPPIPQDPAYHRFADGTARFGIPNFWNVVSNLPFLAVGLAGVLDVYRGRPAIL---GE 76

Query:    81 LW-GWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMXXXXXXXXXXXXXERIDEHKGT 139
                 +  FF  VA V  GS+YYHL P++A LVWDRLPM             E +    G 
Sbjct:    77 FHIAYLIFFAAVALVAPGSAYYHLNPDNATLVWDRLPMTVAFMALFSIVLAEYVSVALGR 136

Query:   140 VSLIPLLLAGVVSILYWSFFD-----DLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWL 194
               L PLL+ GVVS++YW F +     DLR Y LVQF+P + IP + +L    +  + Y L
Sbjct:   137 RLLWPLLVIGVVSVVYWDFTEAQGRGDLRLYGLVQFLPMLLIPPILLLFRSRFGGTAY-L 195

Query:   195 WAA-GFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAM-VPVFLTLMLAKRTIETERV 252
             WA  G Y +AK  E +D+PI+R   H +SGH LKHL AA+ V VFL  +  + T+    V
Sbjct:   196 WAVLGAYAVAKAAELLDEPIFR-IFHPLSGHALKHLLAALGVYVFLAAIRRRSTVSPSSV 254

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q481Y3 CPS_2419 "Putative membrane protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 93/237 (39%), Positives = 132/237 (55%)

Query:     3 KRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIV 62
             ++ +    + L+C  V +++   I QS EYHDFAD R F  IPN  NV+SN PF+++G +
Sbjct:    15 RKGIIGISIILLCITVGVLLQEPIAQSLEYHDFADNRSFLSIPNFYNVLSNIPFIIVGFM 74

Query:    63 GLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMXXXXX 122
             G+   F  N    +L     G+   F+G+  +G GS YYHL P++  LVWDRLPM     
Sbjct:    75 GIHSLFISNKIT-KLDELKVGYCFLFLGLLLIGFGSGYYHLWPSNHTLVWDRLPMTLAFM 133

Query:   123 XXXXXXXXERIDEHKGTVSLIPLLLAGVVSILYWSFFD-----DLRPYALVQFVPCIAIP 177
                     E +    G   L PLL+ G  S+LYW + +     DLR Y LVQF+P IA+P
Sbjct:   134 ALIAIIIAEYLSVELGKRLLYPLLIIGGASVLYWDYTESNGAGDLRYYILVQFLPLIAVP 193

Query:   178 LMAILLPPMYTHST-YWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAM 233
             L+ + + P +++   YW W    Y+LAK+ E  D  I+      +SGHTLKHL AA+
Sbjct:   194 LILLFMKPAFSYGNRYW-WLFLTYILAKLFEHFDTYIFE-VLTAISGHTLKHLIAAL 248

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TIGR_CMR|CPS_2419 CPS_2419 "putative membrane protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 93/237 (39%), Positives = 132/237 (55%)

Query:     3 KRTVYAWGVALICFIVLMIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIV 62
             ++ +    + L+C  V +++   I QS EYHDFAD R F  IPN  NV+SN PF+++G +
Sbjct:    15 RKGIIGISIILLCITVGVLLQEPIAQSLEYHDFADNRSFLSIPNFYNVLSNIPFIIVGFM 74

Query:    63 GLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMXXXXX 122
             G+   F  N    +L     G+   F+G+  +G GS YYHL P++  LVWDRLPM     
Sbjct:    75 GIHSLFISNKIT-KLDELKVGYCFLFLGLLLIGFGSGYYHLWPSNHTLVWDRLPMTLAFM 133

Query:   123 XXXXXXXXERIDEHKGTVSLIPLLLAGVVSILYWSFFD-----DLRPYALVQFVPCIAIP 177
                     E +    G   L PLL+ G  S+LYW + +     DLR Y LVQF+P IA+P
Sbjct:   134 ALIAIIIAEYLSVELGKRLLYPLLIIGGASVLYWDYTESNGAGDLRYYILVQFLPLIAVP 193

Query:   178 LMAILLPPMYTHST-YWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAM 233
             L+ + + P +++   YW W    Y+LAK+ E  D  I+      +SGHTLKHL AA+
Sbjct:   194 LILLFMKPAFSYGNRYW-WLFLTYILAKLFEHFDTYIFE-VLTAISGHTLKHLIAAL 248

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|Q83E22 CBU_0514 "Hypothetical membrane spanning protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 93/228 (40%), Positives = 115/228 (50%)

Query:    26 IPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRL--QGELWG 83
             IPQ   YH FADQR   GIPN  NV SN  FL+IG  GL   F     +       E   
Sbjct:    26 IPQDPAYHHFADQRVIAGIPNFFNVTSNIFFLLIGSYGLYFVFKQKTDSQTFLNPAEKIF 85

Query:    84 WACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMXXXXXXXXXXXXXERIDEHKGTVSLI 143
             + CFF G+  VG GS+YYHL P +  LVWDRL +             ERI+   G   L 
Sbjct:    86 YICFFAGLVFVGFGSAYYHLAPTNKTLVWDRLGISIAFMSLFSAMIAERINLRAGLWLLF 145

Query:   144 PLLLAGVVSILYWSFFD-----DLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAG 198
             PL+  G+ S+ YW + +     DLR Y  VQF+P +++P + IL P  Y  STY +W A 
Sbjct:   146 PLIFVGISSVGYWIYSESIGQSDLRFYVAVQFLPLLSMPFILILFPRPYNKSTY-IWLAL 204

Query:   199 F-YLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKR 245
               Y      E  D  IYR  H  +SGHTLKHL  A+   F+   L  R
Sbjct:   205 ISYTTGAFVEHHDHEIYRQLHETISGHTLKHLLDALSSYFILHYLKSR 252

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_0514 CBU_0514 "membrane protein, putative" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 93/228 (40%), Positives = 115/228 (50%)

Query:    26 IPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRL--QGELWG 83
             IPQ   YH FADQR   GIPN  NV SN  FL+IG  GL   F     +       E   
Sbjct:    26 IPQDPAYHHFADQRVIAGIPNFFNVTSNIFFLLIGSYGLYFVFKQKTDSQTFLNPAEKIF 85

Query:    84 WACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMXXXXXXXXXXXXXERIDEHKGTVSLI 143
             + CFF G+  VG GS+YYHL P +  LVWDRL +             ERI+   G   L 
Sbjct:    86 YICFFAGLVFVGFGSAYYHLAPTNKTLVWDRLGISIAFMSLFSAMIAERINLRAGLWLLF 145

Query:   144 PLLLAGVVSILYWSFFD-----DLRPYALVQFVPCIAIPLMAILLPPMYTHSTYWLWAAG 198
             PL+  G+ S+ YW + +     DLR Y  VQF+P +++P + IL P  Y  STY +W A 
Sbjct:   146 PLIFVGISSVGYWIYSESIGQSDLRFYVAVQFLPLLSMPFILILFPRPYNKSTY-IWLAL 204

Query:   199 F-YLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTLMLAKR 245
               Y      E  D  IYR  H  +SGHTLKHL  A+   F+   L  R
Sbjct:   205 ISYTTGAFVEHHDHEIYRQLHETISGHTLKHLLDALSSYFILHYLKSR 252


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.141   0.466    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      289       276   0.00079  115 3  11 22  0.39    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  234 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.79u 0.10s 19.89t   Elapsed:  00:00:01
  Total cpu time:  19.79u 0.10s 19.89t   Elapsed:  00:00:01
  Start:  Sat May 11 05:55:15 2013   End:  Sat May 11 05:55:16 2013

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026482001 SubName- Full=Chromosome chr12 scaffold_38, whole genome shotgun sequence; (286 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	289
pfam05875	264	pfam05875, Ceramidase, Ceramidase	2e-04

>gnl|CDD|218789 pfam05875, Ceramidase, Ceramidase

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 18/146 (12%)

Query: 49  NVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDA 108
           N +SN  F+++G+ G+ L    N    R           ++G+  VG+GS  +H      
Sbjct: 29  NTLSNLIFILLGLYGIYLARR-NKLEKRFIL-------IYLGLILVGLGSWLFH-----M 75

Query: 109 RLVW-----DRLPMTIAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSFFDDLR 163
            L +     D LPM  A    +  +   R    K   +++ +LL  + +I+   +F    
Sbjct: 76  TLKYHGQLLDELPMIYATCIPLYSWFPRRKFFFKRDRTVLAILLFLLAAIVTVLYFILKN 135

Query: 164 PYALVQFVPCIAIPLMAILLPPMYTH 189
           P         + IP++   +  M  +
Sbjct: 136 PVIHQVAFGLLTIPVVLRSIYLMKRY 161

This family consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates, EC:3.5.1.23. Length = 264

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	289
PF05875	262	Ceramidase: Ceramidase; InterPro: IPR008901 This e	100.0
KOG2329	276	consensus Alkaline ceramidase [Lipid transport and	99.8
PF03006	222	HlyIII: Haemolysin-III related; InterPro: IPR00425	98.03
PF13965	570	SID-1_RNA_chan: dsRNA-gated channel SID-1	97.91
PF04080	267	Per1: Per1-like ; InterPro: IPR007217 A member of	97.73
PRK15087	219	hemolysin; Provisional	97.51
TIGR01065	204	hlyIII channel protein, hemolysin III family. This	97.46
KOG2970	319	consensus Predicted membrane protein [Function unk	96.81
COG1272	226	Predicted membrane protein, hemolysin III homolog	96.18
PF12036	186	DUF3522: Protein of unknown function (DUF3522); In	95.1
COG5237	319	PER1 Predicted membrane protein [Function unknown]	91.17
PF14325	125	DUF4383: Domain of unknown function (DUF4383)	90.06

>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases

Probab=100.00  E-value=2.2e-35  Score=271.51  Aligned_cols=200  Identities=19%  Similarity=0.222  Sum_probs=150.0

Q ss_pred             cCCchhhHhhhhHHHHHHHHHHHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhhhhcCCCCCchhhhhhhhHHHHH
Q 022991           42 FGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAF  121 (289)
Q Consensus        42 ~gIpn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~~~~~lff~Gl~lvG~GSayyHl~p~~~~llwDrLPM~iaf  121 (289)
                      --|+|++||+||++|+++|++|++.+++++        +..++.++++|+++||+||++||+++++++|++||+||++++
T Consensus        22 ~yiAEf~NtlSNl~fi~~al~gl~~~~~~~--------~~~~~~l~~~~l~~VGiGS~~FHaTl~~~~ql~DelPMl~~~   93 (262)
T PF05875_consen   22 PYIAEFWNTLSNLAFIVAALYGLYLARRRG--------LERRFALLYLGLALVGIGSFLFHATLSYWTQLLDELPMLWAT   93 (262)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHhhcc--------ccchhHHHHHHHHHHHHhHHHHHhChhhhHHHhhhhhHHHHH
Confidence            349999999999999999999998766532        355788999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHh-ccchhhHHHHHHHHHHHHHhhhhhccCCccchhhhh-------hHHHHHHHHHHHH-cC---CCCch
Q 022991          122 TSIIAIFIIERI-DEHKGTVSLIPLLLAGVVSILYWSFFDDLRPYALVQ-------FVPCIAIPLMAIL-LP---PMYTH  189 (289)
Q Consensus       122 ~~l~~~~~~erv-~~r~g~~~l~~Ll~~g~~sv~yw~~~~dlrpy~~vQ-------~~p~l~i~~~~~~-~~---~~~~~  189 (289)
                      +.+++..+.++. +.+.+......+..++.++..+....++   ...+|       +..++........ .+   .+...
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~t~~~~~~~~---p~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (262)
T PF05875_consen   94 LLFLYIVLTRRYSSPRYRLALPLLLFIYAVVVTVLYFVLDN---PVFHQIAFASLVLLVILRSIYLIRRRVRDACRRRRA  170 (262)
T ss_pred             HHHHHHHhcccccCchhhHHHHHHHHHHHHHHHHHHhhhcc---chhhhhhHHHHHHHHHHHHHHHHHHhcCchhhchHH
Confidence            999999999999 5555554444555545444434433233   23333       1111111111111 11   12233


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCHHHHhhcc-----------cccccchHHHHHHhHHHHHHHHHHHhhhhccccc
Q 022991          190 STYWLWAAGFYLLAKVEEAMDKPIYRWTH-----------HIVSGHTLKHLCAAMVPVFLTLMLAKRTIETERV  252 (289)
Q Consensus       190 ~~~~~~a~~~yllAk~~e~~D~~ic~~~~-----------~llsGHsLwHLlaAl~~~~l~~~l~~r~~~~~~~  252 (289)
                      .+....++++|++|+++|++|+.+|+...           .++|||+|||+++|++.|+..+..++.+...|..
T Consensus       171 ~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~~~~~~~~~~~  244 (262)
T PF05875_consen  171 RRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVFVAYLRALYEGP  244 (262)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            57788999999999999999999999653           3568999999999999999999887765555433

Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane

>KOG2329 consensus Alkaline ceramidase [Lipid transport and metabolism]

Probab=99.80  E-value=1.9e-19  Score=166.90  Aligned_cols=202  Identities=17%  Similarity=0.083  Sum_probs=127.3

Q ss_pred             CCchhhHhhhhHHHHHHHHHHHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhhhhcCCCCCchhhhhhhhHHHHHH
Q 022991           43 GIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFT  122 (289)
Q Consensus        43 gIpn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~~~~~lff~Gl~lvG~GSayyHl~p~~~~llwDrLPM~iaf~  122 (289)
                      -|+||.||.||+||++.+.+|+.. ..++       ....++.+..++.+.+|+||.|||+||+...|+.||+||...+.
T Consensus        31 yIAEf~NT~sN~~fil~~~~~l~~-~y~~-------~~e~~~~l~~v~~~ivgl~S~~fH~TL~~~~QllDElamiw~i~  102 (276)
T KOG2329|consen   31 YIAEFANTESNSPFILLAFIGLHC-AYRQ-------KLEKRAYLICVLFTIVGLGSMYFHMTLVYKGQLLDELAMIWEIP  102 (276)
T ss_pred             HHHHHHHHhhcchHHHHHHHHHHH-HHHH-------HhhhhHHHHHHHHHHHHHHHhhhhhhHHHhheehhhhhHHHHHH
Confidence            399999999999999999999854 3333       13457889999999999999999999999999999999999333


Q ss_pred             HHHHHHHHHHhccchh-----hHHHHHHHHHHHHHhhhhhcc-CCccchhhhhhHHHHHHHHHHHHcC--CCCchhHHHH
Q 022991          123 SIIAIFIIERIDEHKG-----TVSLIPLLLAGVVSILYWSFF-DDLRPYALVQFVPCIAIPLMAILLP--PMYTHSTYWL  194 (289)
Q Consensus       123 ~l~~~~~~erv~~r~g-----~~~l~~Ll~~g~~sv~yw~~~-~dlrpy~~vQ~~p~l~i~~~~~~~~--~~~~~~~~~~  194 (289)
                      .  +....+.-.....     +....-+++...+++.+...- .+...++..-+.+.++++.+-....  .+..+.-...
T Consensus       103 ~--~~~~cy~p~~~~~~~~~~~~tF~~~~~~~avt~~~l~~~~p~~n~v~~~~~s~~v~v~~~~~~~~~~~~~~r~l~~~  180 (276)
T KOG2329|consen  103 L--VSLLCYFPKFLVKETFSKRLTFILVLLILAVTIVGLSFLEPIVNAVALGFFSLPVAVVSMYEYYIHVNDAKRNLGAT  180 (276)
T ss_pred             H--HHHhhcchhhhccccccchhHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhhhhheeeccHhHhccCce
Confidence            3  3333322221111     111112222333332332211 1211122211222233333333332  1111111111


Q ss_pred             HHHHHHHHHHHHHhcCHHHHhhc-----------ccccccchHHHHHHhHHHHHHHHHHHhhhhcccccccc
Q 022991          195 WAAGFYLLAKVEEAMDKPIYRWT-----------HHIVSGHTLKHLCAAMVPVFLTLMLAKRTIETERVSLL  255 (289)
Q Consensus       195 ~a~~~yllAk~~e~~D~~ic~~~-----------~~llsGHsLwHLlaAl~~~~l~~~l~~r~~~~~~~~~~  255 (289)
                       +....+.|..+|..|+..|+..           |..+.+|+|||++++++.|....++.+-+..+-|..+-
T Consensus       181 -~~i~~~v~~~~w~~D~~~c~f~~~~~~~l~~~~gi~l~~~a~Whv~s~~~~y~~~~~~~~~~~~~~~~~~~  251 (276)
T KOG2329|consen  181 -GVILWLVGFIFWFLDRLLCSFWLRLRRYLALPLGILLELHAWWHVLTSIGSYRTITFLLYDRVLYLPGEPK  251 (276)
T ss_pred             -eeeehhhhcchhhhhHHHHHHHHHhhhhhccHHHHHHHHHHHHhheecCChhHHHHHHHHhHHhccCCCCC
Confidence             6778888999999999999842           33468999999999999999988877766555555443

>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins

Probab=98.03  E-value=0.00022  Score=63.11  Aligned_cols=190  Identities=15%  Similarity=0.094  Sum_probs=103.0

Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhhhhcCCCC-------CchhhhhhhhH
Q 022991           45 PNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPN-------DARLVWDRLPM  117 (289)
Q Consensus        45 pn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~~~~~lff~Gl~lvG~GSayyHl~p~-------~~~llwDrLPM  117 (289)
                      -|.+|+.|++.=.+..+............+...+.+.+...++..+....-..|+.||+...       +..+-.|...+
T Consensus         5 NEt~NiwtHll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~~gI   84 (222)
T PF03006_consen    5 NETVNIWTHLLGAILFLALLIFLLSLASSPSFSPWDYIPFLIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDYAGI   84 (222)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcchhhh
Confidence            38999999985554444443322222111111233456788999999999999999999332       23466799988


Q ss_pred             HHHHHHHHHHHHHHHhc--cchhh---HHHHHHHHHHHHHhhhhhcc-CC-----ccchhhhhhHHHHHHHHHHHHcCCC
Q 022991          118 TIAFTSIIAIFIIERID--EHKGT---VSLIPLLLAGVVSILYWSFF-DD-----LRPYALVQFVPCIAIPLMAILLPPM  186 (289)
Q Consensus       118 ~iaf~~l~~~~~~erv~--~r~g~---~~l~~Ll~~g~~sv~yw~~~-~d-----lrpy~~vQ~~p~l~i~~~~~~~~~~  186 (289)
                      .+.+++-....+--...  ...+.   .....+.+.|.......... ..     ...|+..-..+.+.+.-......+.
T Consensus        85 ~l~i~gs~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~~~~~~~  164 (222)
T PF03006_consen   85 FLLIAGSYTPFIYYGFYCHPWLGWFYLAFIWILALIGIVLSLFPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRIFFLGGW  164 (222)
T ss_pred             hHhHhhhhhhHHHhhccccchHHHHHHHHHHHHHHHhHHhhcchhhcCCccceeeehHhHHHHHHHHhhhHHHHHHhccc
Confidence            88776654433332221  11222   11122222233333222211 11     2223333322322222212222211


Q ss_pred             --CchhHHHHHHHHHHHHHHHHHhcC------HHHHhhcccccccchHHHHHHhHHHHH
Q 022991          187 --YTHSTYWLWAAGFYLLAKVEEAMD------KPIYRWTHHIVSGHTLKHLCAAMVPVF  237 (289)
Q Consensus       187 --~~~~~~~~~a~~~yllAk~~e~~D------~~ic~~~~~llsGHsLwHLlaAl~~~~  237 (289)
                        ...-.....+..+|.+|-++-..+      .--||.   +-+.|.+||++..++.++
T Consensus       165 ~~~~~~~~~~~~~~~y~~G~~fy~~~~PEr~~pg~fD~---~g~sHqi~Hi~v~~~~~~  220 (222)
T PF03006_consen  165 GSPDPLWLLILGGVLYLLGAVFYATRIPERWFPGKFDI---WGHSHQIWHIFVVLAALC  220 (222)
T ss_pred             cchHHHHHHHHHHHHHHHhHHHhhhccccccCCCCcCC---CCccHHHHHHHHHHHHHH
Confidence              111566778889999999998888      223343   357899999999988753

This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane

>PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1

Probab=97.91  E-value=0.0013  Score=67.77  Aligned_cols=111  Identities=20%  Similarity=0.253  Sum_probs=83.3

Q ss_pred             CCCCcccccccccccccCCchhhHhhhhHHHHHHHHHHHHHHHhcccccccc--chhhh---HHHHHHHHHHHHHHhhhh
Q 022991           26 IPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRL--QGELW---GWACFFIGVAAVGVGSSY  100 (289)
Q Consensus        26 ipq~~~yh~fAD~R~~~gIpn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~--~~~~~---~~~lff~Gl~lvG~GSay  100 (289)
                      =.||.=||+|.=.|.+++..-|=|++||+.+++.|+.=+....||+.+....  -+.+.   .+...-.++++-|+-|+.
T Consensus       253 gn~D~CyyNf~Cs~p~~~~~~FN~v~Sn~gy~~lG~lfliiv~~r~~~~~~~~~~gi~~~~~~~~~~g~~li~egi~sa~  332 (570)
T PF13965_consen  253 GNQDMCYYNFLCSHPLGGFSAFNNVFSNIGYVLLGLLFLIIVFRRKIFHRQPTSYGIPQHYGLFYAMGLALIMEGILSAC  332 (570)
T ss_pred             CCCceeeeehhhhcccccccchhhhHhhHHHHHHHHHHHHHHHHhhhhccccccCCCCccchhHHHHHHHHHHHHHHHHH
Confidence            5788899999999999999999999999999999987665544433221111  12222   344555677789999999


Q ss_pred             hcCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhccc
Q 022991          101 YHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEH  136 (289)
Q Consensus       101 yHl~p~~~~llwDrLPM~iaf~~l~~~~~~erv~~r  136 (289)
                      ||.=|++...--|.-=|=+.....+--+...|-+..
T Consensus       333 yh~CPn~~~fqfdt~fmyvi~~L~~lkiyq~RH~di  368 (570)
T PF13965_consen  333 YHICPNRSNFQFDTSFMYVIAGLCMLKIYQKRHPDI  368 (570)
T ss_pred             hhcCcCchhhHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            999999999999998887766655555566666654

>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum []

Probab=97.73  E-value=0.0028  Score=59.73  Aligned_cols=209  Identities=14%  Similarity=0.060  Sum_probs=118.8

Q ss_pred             cCCCCCCcccccccccccccCCchhhHhhhhHHHHHHHHHHHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhhhhc
Q 022991           23 TPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYH  102 (289)
Q Consensus        23 ~p~ipq~~~yh~fAD~R~~~gIpn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~~~~~lff~Gl~lvG~GSayyH  102 (289)
                      .+|+|   +||-==-=+.++||-|..-|+-.+.=+++-..|+...++.-  +.+.+ ....|..+...-+..=+=|+.||
T Consensus        34 g~~i~---QfhGKWPF~Rv~GiQEp~Sv~FSllNl~~h~~~~~~~~~~~--~~~~p-~~~~~~~~~~v~~naW~wStvFH  107 (267)
T PF04080_consen   34 GEPIV---QFHGKWPFKRVLGIQEPASVLFSLLNLLAHYRGLRKFRRQV--PRNSP-MYPYYIIYAIVSMNAWIWSTVFH  107 (267)
T ss_pred             CCCcc---cccccccchhhhcCchHHHHHHHHHhHHHHHHHHHHHHHhc--cCCCC-CcCeeehHHHHHHHHHHHHHHHH
Confidence            44555   35541122456999999999988888888888886655532  11111 11124444444444557899999


Q ss_pred             CCCCCchhhhhhhhHHHHHHHHHHHHHHHHhcc--chhhHHHHHHHHHHHHH--hhhhhc-cC----CccchhhhhhHHH
Q 022991          103 LEPNDARLVWDRLPMTIAFTSIIAIFIIERIDE--HKGTVSLIPLLLAGVVS--ILYWSF-FD----DLRPYALVQFVPC  173 (289)
Q Consensus       103 l~p~~~~llwDrLPM~iaf~~l~~~~~~erv~~--r~g~~~l~~Ll~~g~~s--v~yw~~-~~----dlrpy~~vQ~~p~  173 (289)
                      +.=...|--+|=-.=....+.-++..+.+..+.  +.....++...++++.+  +.|-.. .-    |++..+.+-.+-.
T Consensus       108 ~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~~~~~~~~~~~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~  187 (267)
T PF04080_consen  108 TRDTPLTEKLDYFSAGATVLFGLYAAIVRIFRLYRRRRLRRIFTALCIAFYIAHVSYLSFVRFDYGYNMKANVAVGLLQN  187 (267)
T ss_pred             HhcccHhhHhHHhhhHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHccccccccHhHHHHHHHHHHHHH
Confidence            999999999998776655555555555555544  33333344444333322  555522 11    3333333222222


Q ss_pred             HHHHHHHHHcCCCCchh-------HHHH--HHHHHHHHHHHHHhcCHHHHhhcccccccchHHHHHHhHHHHHHHH
Q 022991          174 IAIPLMAILLPPMYTHS-------TYWL--WAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL  240 (289)
Q Consensus       174 l~i~~~~~~~~~~~~~~-------~~~~--~a~~~yllAk~~e~~D~~ic~~~~~llsGHsLwHLlaAl~~~~l~~  240 (289)
                      +.-...+....+++.+.       ....  .....-.+|..+|..|-+=.-   .++-.|++||+.|.--+++...
T Consensus       188 ~lw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~lam~LEl~DFpP~~---~~lDAHALWHl~Tip~~~~wy~  260 (267)
T PF04080_consen  188 ILWLLWSFRNYRRYPSVKKSYSKRWKLWPILFVVLTILAMSLELFDFPPIF---WLLDAHALWHLATIPPTYLWYD  260 (267)
T ss_pred             HHHHHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHhhccCccc---ccchHHHHHHHHHhhHHHHHHH
Confidence            22222222222222221       2222  556778889999999985432   2588899999999987765443

>PRK15087 hemolysin; Provisional

Probab=97.51  E-value=0.012  Score=53.71  Aligned_cols=184  Identities=20%  Similarity=0.166  Sum_probs=99.2

Q ss_pred             CchhhHhhhhHHHHHHHHHHHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhhhhcCCCCC----chhhhhhhhHHH
Q 022991           44 IPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPND----ARLVWDRLPMTI  119 (289)
Q Consensus        44 Ipn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~~~~~lff~Gl~lvG~GSayyHl~p~~----~~llwDrLPM~i  119 (289)
                      -.|..|..|++.=.+.++.|+.....+.....+...+.....++..++.+-=.-|+.||+.++.    .-.-+|...|-+
T Consensus        14 ~eE~~N~~tH~ig~~~a~~~~~~l~~~~~~~~~~~~~~~~~~vy~~s~~~l~~~StlYH~~~~~~~~~~~~rlDh~~I~l   93 (219)
T PRK15087         14 AEEIANSISHGIGLVFGIVGLVLLLVQAVDANADATAITSYSLYGGSMILLFLASTLYHAIPHQRAKRWLKKFDHCAIYL   93 (219)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHccHHHHHH
Confidence            3699999999854445666664433221011111223345677888888888889999999843    234578888888


Q ss_pred             HHHHHHHHHHHHHhccchhhHHHHH---HHHHHHHHhhhhhccCCccchhhhhhHHH-----HHHHHHHHHcCCCCchhH
Q 022991          120 AFTSIIAIFIIERIDEHKGTVSLIP---LLLAGVVSILYWSFFDDLRPYALVQFVPC-----IAIPLMAILLPPMYTHST  191 (289)
Q Consensus       120 af~~l~~~~~~erv~~r~g~~~l~~---Ll~~g~~sv~yw~~~~dlrpy~~vQ~~p~-----l~i~~~~~~~~~~~~~~~  191 (289)
                      .+++-..-..--......+...+..   +.++|...-..+  .+.-|..=..-|+.+     +.++-+....+  ...-.
T Consensus        94 lIaGsytP~~~~~~~~~~~~~l~~~iW~~a~~Gi~~~~~~--~~~~r~l~~~~Yl~mGw~~v~~~~~l~~~~~--~~~l~  169 (219)
T PRK15087         94 LIAGTYTPFLLVGLDSPLARGLMIVIWSLALLGILFKLAF--AHRFKVLSLVTYLAMGWLSLIVIYQLAIKLA--IGGVT  169 (219)
T ss_pred             HHHHhhHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCchHHHHHHHHHHHHHHHHHHHHHHhCC--HHHHH
Confidence            7776554333322222333322222   223344333222  232232222223322     22222211121  12234


Q ss_pred             HHHHHHHHHHHHHHHHhcCHHHHhhcccccccchHHHHHHhHHHHHHH
Q 022991          192 YWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLT  239 (289)
Q Consensus       192 ~~~~a~~~yllAk~~e~~D~~ic~~~~~llsGHsLwHLlaAl~~~~l~  239 (289)
                      .+..+..+|.+|-.+=..|+.     +   +-|.+||++.-++..+=.
T Consensus       170 ~l~~GG~~Y~~G~~fY~~~~~-----p---~~H~IwH~fVl~ga~~H~  209 (219)
T PRK15087        170 LLAVGGVVYSLGVIFYVCKRI-----P---YNHAIWHGFVLGGSVCHF  209 (219)
T ss_pred             HHHHHhHHHHhhHHHHccCCC-----C---CchhHHHHHHHHHHHHHH
Confidence            555677789999888776621     2   259999999988775433

>TIGR01065 hlyIII channel protein, hemolysin III family

Probab=97.46  E-value=0.0095  Score=53.46  Aligned_cols=182  Identities=16%  Similarity=0.162  Sum_probs=99.0

Q ss_pred             hhhHhhhhHHHHHHHHHHHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhhhhcCCCCCc-----hhhhhhhhHHHH
Q 022991           46 NTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPNDA-----RLVWDRLPMTIA  120 (289)
Q Consensus        46 n~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~~~~~lff~Gl~lvG~GSayyHl~p~~~-----~llwDrLPM~ia  120 (289)
                      |..|+.|.+.=.+.++.|...+..... ...+..+...+.++.++...-=..|+.||+.+.++     .+-+|...|.+.
T Consensus         2 e~~N~~tH~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~vy~~~~~~~~~~St~yH~~~~s~~~~~~~~rlD~~gI~~l   80 (204)
T TIGR01065         2 EIANAITHGIGAVLSIIALALLVIYSW-DHGGAVAVLGFSIYGISLILLFLVSTLYHSIPKGSKAKNWLRKIDHSMIYVL   80 (204)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcCchhHHHHHHHccHHHHHHH
Confidence            788999998444444444432222110 11123355678889999988889999999999532     344688888888


Q ss_pred             HHHHHHHHHHHHhccchhhHHHHHHHHHHHHHhhhhhc-cCCccchhhhhhH-----HHHHHHHHHHHcCCCCchhHHHH
Q 022991          121 FTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYWSF-FDDLRPYALVQFV-----PCIAIPLMAILLPPMYTHSTYWL  194 (289)
Q Consensus       121 f~~l~~~~~~erv~~r~g~~~l~~Ll~~g~~sv~yw~~-~~dlrpy~~vQ~~-----p~l~i~~~~~~~~~~~~~~~~~~  194 (289)
                      +++-..-..--......+...+...-..+...+..-.. .+.-|+.=..-|+     +++.+|-+....+  ...-..+.
T Consensus        81 IaGsytP~~~~~~~~~~~~~~~~~iw~la~~gi~~~~~~~~~~r~~r~~~y~~~G~~~v~~~~~~~~~~~--~~~~~~l~  158 (204)
T TIGR01065        81 IAGTYTPFLLLALPGPLGWTVLWIIWGLAIGGIIYKLFFHKRPRWLSLFLYLIMGWLVVLVIKPLYHNLP--GAGFSLLA  158 (204)
T ss_pred             HHHhhHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHHHHHHHHHHhCC--HHHHHHHH
Confidence            77765544443333334433222221222222222222 1222322222222     3233332211111  11234555


Q ss_pred             HHHHHHHHHHHHHhcCHHHHhhccccccc-chHHHHHHhHHHHH
Q 022991          195 WAAGFYLLAKVEEAMDKPIYRWTHHIVSG-HTLKHLCAAMVPVF  237 (289)
Q Consensus       195 ~a~~~yllAk~~e~~D~~ic~~~~~llsG-HsLwHLlaAl~~~~  237 (289)
                      .+..+|.+|-.+=..|.+-- .      . |.+||++.-++..+
T Consensus       159 ~gg~~Y~~G~~fY~~~~p~~-~------~~H~iwH~fV~~g~~~  195 (204)
T TIGR01065       159 AGGLLYTVGAIFYALKWPIP-F------TYHAIWHLFVLGASAC  195 (204)
T ss_pred             HHhHHHHcchHheeecCCCC-C------CcChHHHHHHHHHHHH
Confidence            67788999999877774321 1      2 99999998887744

This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.

>KOG2970 consensus Predicted membrane protein [Function unknown]

Probab=96.81  E-value=0.077  Score=50.84  Aligned_cols=203  Identities=19%  Similarity=0.277  Sum_probs=106.7

Q ss_pred             CCCCCCcccc-cccccccccCCchhhHhhhhHHHHHHHHHHHHHHHhccccccccchhh-hHHHHHHHHHHHHHHhhhhh
Q 022991           24 PAIPQSEEYH-DFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGEL-WGWACFFIGVAAVGVGSSYY  101 (289)
Q Consensus        24 p~ipq~~~yh-~fAD~R~~~gIpn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~-~~~~lff~Gl~lvG~GSayy  101 (289)
                      .||||   || ---=+|- +||-|+.-|+=.+.=++.=.-|++.-++..  +.+.+... ..|-+...--+..=+-|+.|
T Consensus        85 ~pi~q---fhGKWpFlrv-lGiQEp~SviFS~lNl~~h~~g~~~~r~~~--~~~~~~r~~~l~~I~a~i~mnawiwSsvF  158 (319)
T KOG2970|consen   85 GPIPQ---FHGKWPFLRV-LGIQEPFSVIFSFLNLITHYKGLVKFRRPK--KPNRPTRYERLWLIYAYIGMNAWIWSSVF  158 (319)
T ss_pred             Ccccc---ccCCcchhhh-hhccchHHHHHHHHHHHHHHHHHhheeccc--CCCCcchhccchhhHHHHHHHHHHHHHhh
Confidence            45655   66 2223444 999999988766555555556665433322  22222221 12333333345556889999


Q ss_pred             cCCCCCchhhhhhhhHH--HHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHH--hhhhhcc-----CCccchhhhhhHH
Q 022991          102 HLEPNDARLVWDRLPMT--IAFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVS--ILYWSFF-----DDLRPYALVQFVP  172 (289)
Q Consensus       102 Hl~p~~~~llwDrLPM~--iaf~~l~~~~~~erv~~r~g~~~l~~Ll~~g~~s--v~yw~~~-----~dlrpy~~vQ~~p  172 (289)
                      |..=.+-|--.|=-.=.  +-|..++.++..-.+-.-++.+-.+...++.+.+  +.|-...     =|++-.+.+-.+-
T Consensus       159 H~rD~~lTEklDYf~A~~~vlf~ly~a~ir~~~i~~~~~~~~~ita~fla~ya~Hi~yls~~~fdYgyNm~~~v~~g~iq  238 (319)
T KOG2970|consen  159 HIRDVPLTEKLDYFSAYLTVLFGLYVALIRMLSIQSLPALRGMITAIFLAFYANHILYLSFYNFDYGYNMIVCVAIGVIQ  238 (319)
T ss_pred             hhcCCchHhhhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhheecccccceeeehhhHHHH
Confidence            99988888888864432  2333333333333333332333444444443333  5555221     1344433332221


Q ss_pred             HHHHHHHHHHcCCCCch-h-HHHHHHHHHHHHHHHHHhcCHHHHhhcccccccchHHHHHHhHHHH
Q 022991          173 CIAIPLMAILLPPMYTH-S-TYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPV  236 (289)
Q Consensus       173 ~l~i~~~~~~~~~~~~~-~-~~~~~a~~~yllAk~~e~~D~~ic~~~~~llsGHsLwHLlaAl~~~  236 (289)
                      .++-.... +..+++.. . .....-+.++.+|..+|..|-+=+++.   +--|++||+.+---++
T Consensus       239 ~vlw~~~~-~~~~~~~s~~~i~~~~i~~~~~LA~sLEi~DFpPy~~~---iDAHALWHlaTIplt~  300 (319)
T KOG2970|consen  239 LVLWLVWS-FKKRNLPSFWRIWPILIVIFFFLAMSLEIFDFPPYAWL---IDAHALWHLATIPLTI  300 (319)
T ss_pred             HHHHHHHH-HHhhcCcchhhhhHHHHHHHHHHHHHHHhhcCCchhhh---cchHHHHHhhcCccHH
Confidence            11111111 11222222 2 223344566799999999999877654   7789999999875543

>COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only]

Probab=96.18  E-value=0.24  Score=45.77  Aligned_cols=189  Identities=15%  Similarity=0.156  Sum_probs=105.2

Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhhhhcCCCCC-----chhhhhhhhHHH
Q 022991           45 PNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEPND-----ARLVWDRLPMTI  119 (289)
Q Consensus        45 pn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~~~~~lff~Gl~lvG~GSayyHl~p~~-----~~llwDrLPM~i  119 (289)
                      .|..|.+|.+.=.++++.++....-.... ..+........++-.++..--.-|..||..|..     .-+-.|...+.+
T Consensus        20 ~e~~n~~tHlvGail~i~~l~~l~~~a~~-~~~~~~~~~~~iy~~sl~~l~~~St~YH~~~~~~~~k~~~rk~DH~~I~v   98 (226)
T COG1272          20 EEIANAITHLIGAILAIVGLVLLLVYALI-TGSALAVIVFSIYGLSLFLLFLVSTLYHSIPNGQKAKAILRKFDHSGIYV   98 (226)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCChhHhhhhhHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHccHHHHHH
Confidence            57889999986666666666433221101 112233456788888999999999999999963     456678888887


Q ss_pred             HHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHhhhh-hccCCccchhhhhhHHH--HHHHHHHHHcC-CCCchhHHHHH
Q 022991          120 AFTSIIAIFIIERIDEHKGTVSLIPLLLAGVVSILYW-SFFDDLRPYALVQFVPC--IAIPLMAILLP-PMYTHSTYWLW  195 (289)
Q Consensus       120 af~~l~~~~~~erv~~r~g~~~l~~Ll~~g~~sv~yw-~~~~dlrpy~~vQ~~p~--l~i~~~~~~~~-~~~~~~~~~~~  195 (289)
                      .+++-.--+.---.....+...+...-..++..+.+- ...+.-|++-..-|+.+  +.++.+--... -....-..+.+
T Consensus        99 LIAgSyTP~~l~~l~~~~~~~~~~iiW~lal~Gi~~kl~~~~~~r~ls~~~yl~mGw~~v~~~~~l~~~l~~~~~~~l~~  178 (226)
T COG1272          99 LIAGSYTPFLLVGLYGPLGWILLGLIWGLALAGILFKLFFKKRFRKLSLVLYLAMGWLGLIVIKPLIAKLGLIGLVLLAL  178 (226)
T ss_pred             HHHHhhHHHhHHHhccchHHHHHHHHHHHHHHHHhhhhhccCcCceeeehhhHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence            7765433222222222233322222222233333222 22233444444444422  22222222211 11133466667


Q ss_pred             HHHHHHHHHHHHhcCHHHHhhcccccccchHHHHHHhHHHHHHHH
Q 022991          196 AAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLTL  240 (289)
Q Consensus       196 a~~~yllAk~~e~~D~~ic~~~~~llsGHsLwHLlaAl~~~~l~~  240 (289)
                      +...|.+|-.+=..|.      ..+-.-|.+||++.-.|..+=..
T Consensus       179 GGv~YsvG~ifY~~~~------~~~~~~H~iwH~fVv~ga~~Hf~  217 (226)
T COG1272         179 GGVLYSVGAIFYVLRI------DRIPYSHAIWHLFVVGGAACHFI  217 (226)
T ss_pred             HhHHheeeeEEEEEee------ccCCchHHHHHHHHHHHHHHHHH
Confidence            8888888877655554      23456799999999888755433

>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised

Probab=95.10  E-value=0.33  Score=43.31  Aligned_cols=63  Identities=25%  Similarity=0.307  Sum_probs=36.3

Q ss_pred             hHhhhhHHHHHHHHHHHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhhhhcCCC-CC-----chhhhhhhhHHHHH
Q 022991           48 LNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGELWGWACFFIGVAAVGVGSSYYHLEP-ND-----ARLVWDRLPMTIAF  121 (289)
Q Consensus        48 ~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~~~~~~lff~Gl~lvG~GSayyHl~p-~~-----~~llwDrLPM~iaf  121 (289)
                      .=++||++|+-.-....   +|+...      |.      ++ -..+++-|+.||+-= .+     --.=||||-=.-++
T Consensus        10 ~l~lSnl~~lP~i~~a~---rr~~~~------Ea------~v-~~~tm~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~   73 (186)
T PF12036_consen   10 LLTLSNLAFLPTIYVAV---RRRYHF------EA------FV-YTFTMFFSTFYHACDSGPGEIFLCIMDWHRLQNIDFI   73 (186)
T ss_pred             HHHHHHHHHHHHHHHHH---HHhhHH------HH------HH-HHHHHHHHHhcccccCCCCceEEeechHHHHHHHHHH
Confidence            45899999997764332   332211      21      12 235678899999984 22     23456777655444


Q ss_pred             HHHHH
Q 022991          122 TSIIA  126 (289)
Q Consensus       122 ~~l~~  126 (289)
                      .+.++
T Consensus        74 ~s~~~   78 (186)
T PF12036_consen   74 GSFLS   78 (186)
T ss_pred             HHHHH
Confidence            44443

This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.

>COG5237 PER1 Predicted membrane protein [Function unknown]

Probab=91.17  E-value=6.3  Score=37.44  Aligned_cols=198  Identities=21%  Similarity=0.306  Sum_probs=100.1

Q ss_pred             cccc-ccccccccCCchhhHhhhhHHHHHHHHHHHHHHHhccccccccchh--hhHHHHHHHHHHHHHHhhhhhcCCCCC
Q 022991           31 EYHD-FADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGE--LWGWACFFIGVAAVGVGSSYYHLEPND  107 (289)
Q Consensus        31 ~yh~-fAD~R~~~gIpn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~--~~~~~lff~Gl~lvG~GSayyHl~p~~  107 (289)
                      +||. .-=||- +|+.|+..++=.+-=++.--.|....+|+- .+....++  -..|.  ++|+. .=+-|..||-.-+-
T Consensus        86 q~hGkW~F~rV-lG~qEfFS~~FS~~Nfi~hy~gfh~m~r~i-~~e~~~~R~~~l~wv--~igml-Awi~SsvFHird~~  160 (319)
T COG5237          86 QRHGKWGFQRV-LGMQEFFSALFSFMNFITHYIGFHRMLRKI-LRETRLGRLYYLQWV--YIGML-AWISSSVFHIRDNT  160 (319)
T ss_pred             hhcCccceeee-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccceEEeeHH--HHHHH-HHHHHhheeeeccc
Confidence            3554 333454 899999888766555555556665433321 00001111  11232  44443 34679999998777


Q ss_pred             chhhhhhhh--HHHHHHHHHHHHHHHHhccch-hhHHHHHH--HHHHHHH--hhhh-----hccCCccc---hhhhhhHH
Q 022991          108 ARLVWDRLP--MTIAFTSIIAIFIIERIDEHK-GTVSLIPL--LLAGVVS--ILYW-----SFFDDLRP---YALVQFVP  172 (289)
Q Consensus       108 ~~llwDrLP--M~iaf~~l~~~~~~erv~~r~-g~~~l~~L--l~~g~~s--v~yw-----~~~~dlrp---y~~vQ~~p  172 (289)
                      -|-=.|---  .++-|..+...+..-++..-+ ++..-.|+  .++.+.+  +.+.     -+.-|++.   ..+.|.  
T Consensus       161 iTeklDYF~AgltVLfGfy~~lvrm~~~~~~p~~K~~~~~~~aifia~fa~Hi~rls~i~fdY~YNm~~n~aigv~q~--  238 (319)
T COG5237         161 ITEKLDYFLAGLTVLFGFYMALVRMILIVSPPIEKATRGPLQAIFIAFFAYHIHRLSNIEFDYVYNMISNCAIGVTQT--  238 (319)
T ss_pred             hhhhHHHHHhhHHHHHHHHHHHHHHHHhhcCchHHHHHhHHHHHHHHHHHHHHHHHhhccceeeehhhhcchHHHHHH--
Confidence            666666432  333333444444444444333 23333333  2222222  2222     11113332   222332  


Q ss_pred             HHHHHHHHHHcCCCCch--hHHHHHHHHHHHHHHHHHhcCHHHHhhcccccccchHHHHHHhHHHHHHH
Q 022991          173 CIAIPLMAILLPPMYTH--STYWLWAAGFYLLAKVEEAMDKPIYRWTHHIVSGHTLKHLCAAMVPVFLT  239 (289)
Q Consensus       173 ~l~i~~~~~~~~~~~~~--~~~~~~a~~~yllAk~~e~~D~~ic~~~~~llsGHsLwHLlaAl~~~~l~  239 (289)
                       ++.-...+.-.++-++  .|..+.-...+.+|-.+|..|-+=++++   +-.|++|||++-....++.
T Consensus       239 -iL~~~~s~~ny~~~g~~~kr~p~~~v~~~~lA~slElfDf~pya~l---IDaHAlWHL~t~~~t~~ly  303 (319)
T COG5237         239 -ILSHLVSFLNYRKLGHTFKRIPLFFVFFFFLAGSLELFDFPPYAYL---IDAHALWHLITCISTPFLY  303 (319)
T ss_pred             -HHHHHHHHhhhHhhhhhhhhhhHHHHHHHHHhhhhhhhccCcHHHH---hhHHHHhHhhhccchHHHH
Confidence             1111222221111111  4545566677888999999999888754   7889999999988664443

>PF14325 DUF4383: Domain of unknown function (DUF4383)

Probab=90.06  E-value=3.7  Score=34.55  Aligned_cols=85  Identities=18%  Similarity=0.352  Sum_probs=52.0

Q ss_pred             hHHHHHHHHHHHHHHHHcCCCCC-CcccccccccccccCC-chhhHhhhhHHHHHHHHHHHHHHHhccccccccchh--h
Q 022991            6 VYAWGVALICFIVLMIVTPAIPQ-SEEYHDFADQRKFFGI-PNTLNVVSNFPFLVIGIVGLVLCFHGNYFNLRLQGE--L   81 (289)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~p~ipq-~~~yh~fAD~R~~~gI-pn~~NvlSNlpFl~~gl~Gl~~~~~~~~~~~~~~~~--~   81 (289)
                      .++.|++++++-++ =+.|.+.+ .++.....+++.++|+ +  .|.+-|+.-++.|+.|+...++.+      .++  .
T Consensus         5 al~~G~~fl~~Gil-GFiPg~t~~~~~~~~~~~~~~lfGlF~--vn~lhn~vHl~~Gv~gl~aa~~~~------~Ar~~~   75 (125)
T PF14325_consen    5 ALVIGVVFLLLGIL-GFIPGFTTNYDEFAGHHSGGYLFGLFA--VNPLHNIVHLLFGVAGLAAARSPR------AARAFL   75 (125)
T ss_pred             HHHHHHHHHHHHHH-hCcCCCCCcccccccCCCCCeEEEeee--ccHHHHHHHHHHHHHHHHHHhchH------HHHHHH
Confidence            34455655555443 34577665 3334455578889997 6  899999999999999986533311      122  2


Q ss_pred             hHHHHHHHHHHHHHHhhh
Q 022991           82 WGWACFFIGVAAVGVGSS   99 (289)
Q Consensus        82 ~~~~lff~Gl~lvG~GSa   99 (289)
                      +...+.|.++...|+...
T Consensus        76 ~~~g~~y~~l~i~Gl~~~   93 (125)
T PF14325_consen   76 RLFGVVYLALGIYGLFPG   93 (125)
T ss_pred             HHHHHHHHHHHHHHHhcc
Confidence            234455666555555433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00