Citrus Sinensis ID: 023055
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 288 | ||||||
| 255578131 | 368 | conserved hypothetical protein [Ricinus | 0.920 | 0.720 | 0.722 | 1e-119 | |
| 359478357 | 380 | PREDICTED: uncharacterized protein LOC10 | 0.951 | 0.721 | 0.752 | 1e-119 | |
| 224106772 | 382 | predicted protein [Populus trichocarpa] | 0.951 | 0.717 | 0.732 | 1e-118 | |
| 297849098 | 382 | hypothetical protein ARALYDRAFT_888027 [ | 0.951 | 0.717 | 0.684 | 1e-114 | |
| 449456016 | 393 | PREDICTED: uncharacterized protein LOC10 | 0.944 | 0.692 | 0.695 | 1e-114 | |
| 297826107 | 381 | hypothetical protein ARALYDRAFT_481676 [ | 0.947 | 0.716 | 0.693 | 1e-113 | |
| 30683843 | 374 | uncharacterized protein [Arabidopsis tha | 0.934 | 0.719 | 0.693 | 1e-112 | |
| 20466346 | 341 | unknown protein [Arabidopsis thaliana] g | 0.934 | 0.788 | 0.693 | 1e-112 | |
| 18390845 | 382 | uncharacterized protein [Arabidopsis tha | 0.951 | 0.717 | 0.699 | 1e-109 | |
| 297746271 | 356 | unnamed protein product [Vitis vinifera] | 0.868 | 0.702 | 0.756 | 1e-109 |
| >gi|255578131|ref|XP_002529935.1| conserved hypothetical protein [Ricinus communis] gi|223530565|gb|EEF32443.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 198/274 (72%), Positives = 234/274 (85%), Gaps = 9/274 (3%)
Query: 1 MGTSHRSGFLKKTNDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGK 60
MG+ HRSG +KTND RLI+TT +GV+ G+FVG SF SVS +KIH+P+ +S D++
Sbjct: 1 MGSIHRSGLSRKTNDSARLIVTTILGVVFGFFVGISFPSVSLTKIHIPSGFISSTDMSST 60
Query: 61 EENINQISESPFSNGSSPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKP 120
++NI G++P+IY NPRGAELLPPGIVVSESDF+LRRLWGEPSEDLKKKP
Sbjct: 61 DQNIR---------GNAPKIYAPRNPRGAELLPPGIVVSESDFYLRRLWGEPSEDLKKKP 111
Query: 121 KYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTK 180
KYL+T TVG +Q+ NI+ +KKFS+DF I+LFHYDG+ S+WD+FEWS++AIHVS+RRQTK
Sbjct: 112 KYLVTFTVGYDQRNNINAAIKKFSDDFTILLFHYDGRVSEWDQFEWSRTAIHVSVRRQTK 171
Query: 181 WWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGLTW 240
WWYAKRFLHPD+VAAYEYIFIWDEDLGVEHFN DKY+ELVKKHGL+ISQPGLEPNNGLTW
Sbjct: 172 WWYAKRFLHPDIVAAYEYIFIWDEDLGVEHFNADKYIELVKKHGLEISQPGLEPNNGLTW 231
Query: 241 QMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYA 274
QMTKRRGD+EVHK TEEKPGWCSDP LPPCAA+
Sbjct: 232 QMTKRRGDKEVHKDTEEKPGWCSDPRLPPCAAFV 265
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478357|ref|XP_002285240.2| PREDICTED: uncharacterized protein LOC100267242 isoform 1 [Vitis vinifera] gi|359478359|ref|XP_003632112.1| PREDICTED: uncharacterized protein LOC100267242 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224106772|ref|XP_002314280.1| predicted protein [Populus trichocarpa] gi|222850688|gb|EEE88235.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297849098|ref|XP_002892430.1| hypothetical protein ARALYDRAFT_888027 [Arabidopsis lyrata subsp. lyrata] gi|297338272|gb|EFH68689.1| hypothetical protein ARALYDRAFT_888027 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449456016|ref|XP_004145746.1| PREDICTED: uncharacterized protein LOC101216740 [Cucumis sativus] gi|449524368|ref|XP_004169195.1| PREDICTED: uncharacterized LOC101216740 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297826107|ref|XP_002880936.1| hypothetical protein ARALYDRAFT_481676 [Arabidopsis lyrata subsp. lyrata] gi|297326775|gb|EFH57195.1| hypothetical protein ARALYDRAFT_481676 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|30683843|ref|NP_850118.1| uncharacterized protein [Arabidopsis thaliana] gi|30683846|ref|NP_850119.1| uncharacterized protein [Arabidopsis thaliana] gi|238479383|ref|NP_001154537.1| uncharacterized protein [Arabidopsis thaliana] gi|62320360|dbj|BAD94744.1| hypothetical protein [Arabidopsis thaliana] gi|330253009|gb|AEC08103.1| uncharacterized protein [Arabidopsis thaliana] gi|330253010|gb|AEC08104.1| uncharacterized protein [Arabidopsis thaliana] gi|330253011|gb|AEC08105.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|20466346|gb|AAM20490.1| unknown protein [Arabidopsis thaliana] gi|25084100|gb|AAN72175.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|18390845|ref|NP_563805.1| uncharacterized protein [Arabidopsis thaliana] gi|79317279|ref|NP_001030994.1| uncharacterized protein [Arabidopsis thaliana] gi|15810567|gb|AAL07171.1| putative storage protein [Arabidopsis thaliana] gi|20259569|gb|AAM14127.1| putative storage protein [Arabidopsis thaliana] gi|332190112|gb|AEE28233.1| uncharacterized protein [Arabidopsis thaliana] gi|332190113|gb|AEE28234.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297746271|emb|CBI16327.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 288 | ||||||
| TAIR|locus:2205140 | 382 | AT1G08040 [Arabidopsis thalian | 0.947 | 0.714 | 0.701 | 5.3e-111 | |
| TAIR|locus:2057557 | 374 | AT2G28310 "AT2G28310" [Arabido | 0.930 | 0.716 | 0.695 | 1.5e-108 | |
| TAIR|locus:2008640 | 404 | AT1G67850 "AT1G67850" [Arabido | 0.947 | 0.675 | 0.621 | 1.7e-100 | |
| TAIR|locus:2086721 | 398 | AT3G27470 "AT3G27470" [Arabido | 0.722 | 0.522 | 0.703 | 2.1e-94 | |
| TAIR|locus:2031905 | 401 | AT1G13000 [Arabidopsis thalian | 0.937 | 0.673 | 0.550 | 1.1e-85 | |
| TAIR|locus:2079291 | 396 | AT3G26440 [Arabidopsis thalian | 0.937 | 0.681 | 0.561 | 3.1e-83 | |
| TAIR|locus:504956279 | 381 | AT1G24570 [Arabidopsis thalian | 0.909 | 0.687 | 0.521 | 1.9e-76 | |
| TAIR|locus:2124608 | 389 | AT4G18530 "AT4G18530" [Arabido | 0.840 | 0.622 | 0.388 | 2.4e-44 | |
| TAIR|locus:2202124 | 438 | AT1G11170 [Arabidopsis thalian | 0.631 | 0.415 | 0.463 | 6.6e-42 | |
| TAIR|locus:2008425 | 425 | AT1G61240 [Arabidopsis thalian | 0.625 | 0.423 | 0.463 | 1.7e-41 |
| TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 193/275 (70%), Positives = 233/275 (84%)
Query: 1 MGTSHRSGFLKKTNDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGK 60
MGT HRSG ++TN+ +LIITT +GV+ G+FVG + SF KI LP+ + +S D+A
Sbjct: 1 MGTMHRSGAPRRTNENAKLIITTIVGVVFGFFVGITLPLGSFRKISLPSGLMSSLDVAMS 60
Query: 61 EENINQISESPFSNGS--SPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKK 118
+ + SP GS SP+IYV TNP GAELLPPGI+V+E+DF+LRRLWGEPSEDLKK
Sbjct: 61 DGKLFSGGRSPEDIGSRKSPKIYVPTNPHGAELLPPGIIVAETDFYLRRLWGEPSEDLKK 120
Query: 119 KPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQ 178
KPKYL+T TVG Q+ NI+ VKKFSEDFQI+LFHYDG+T++WD+FEWSK+AIH+S ++Q
Sbjct: 121 KPKYLVTFTVGFEQRNNINAAVKKFSEDFQILLFHYDGRTTEWDQFEWSKNAIHISAKKQ 180
Query: 179 TKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGL 238
TKWWYAKRFLHPDVV+AYEYIFIWDEDLGVEHFN D+Y+ELVKKHGL+ISQPGLEPNNGL
Sbjct: 181 TKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADRYVELVKKHGLEISQPGLEPNNGL 240
Query: 239 TWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAY 273
TW+MTKRRGD++VHK T+EKPGWCSDPHLPPCAA+
Sbjct: 241 TWEMTKRRGDRDVHKETKEKPGWCSDPHLPPCAAF 275
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| TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00024553001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (380 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 288 | |||
| pfam05212 | 294 | pfam05212, DUF707, Protein of unknown function (DU | 1e-125 |
| >gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707) | Back alignment and domain information |
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Score = 359 bits (923), Expect = e-125
Identities = 131/195 (67%), Positives = 163/195 (83%), Gaps = 1/195 (0%)
Query: 80 IYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRM 139
I+V TNPRGAE LPPGIVVSESDF+LRRLWG P ED+ KPKYLL TVG +QK N+D
Sbjct: 1 IWVPTNPRGAERLPPGIVVSESDFYLRRLWGSPEEDVASKPKYLLAFTVGYSQKANVDAC 60
Query: 140 VKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYI 199
VKKFS++F I+LFHYDG+T++WDE EWSK AIHVS ++QTKWW+AKRFLHPD+VA YEYI
Sbjct: 61 VKKFSDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYI 120
Query: 200 FIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNG-LTWQMTKRRGDQEVHKVTEEK 258
F+WDEDLGV++F+ ++Y+++VKKHGL+ISQPGL+P+ G +TW++TKRRGD EVHK T EK
Sbjct: 121 FLWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREK 180
Query: 259 PGWCSDPHLPPCAAY 273
C + PPC +
Sbjct: 181 GRCCDNSTGPPCTGF 195
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This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 288 | |||
| PF05212 | 294 | DUF707: Protein of unknown function (DUF707); Inte | 100.0 |
| >PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana | Back alignment and domain information |
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Probab=100.00 E-value=1.9e-102 Score=722.83 Aligned_cols=208 Identities=60% Similarity=1.121 Sum_probs=202.6
Q ss_pred eeccCCCCCCCCCCCCccccCCccccccccCCCCcCcCCCCceEEEEEeccccccchhHHhhhcccCcEEEEEEECCCCC
Q 023055 80 IYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTS 159 (288)
Q Consensus 80 ~~~~~~p~g~e~LP~gIv~~~Sdl~~r~Lwg~p~~~~~~~~k~Lla~~VG~kqk~~Vd~~v~KFs~nF~vmLFHYDG~vd 159 (288)
|+++++|+|+|+||+|||+++||||||||||+|++|...++|||||||||+|||++||++|+||++||+||||||||+||
T Consensus 1 ~~~~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~~~~~k~Lla~~VG~kqk~~vd~~v~Kf~~nF~i~LfhYDg~vd 80 (294)
T PF05212_consen 1 IWVPCNPRGAERLPPGIVVRESDLELRPLWGNPSEDLPKKPKYLLAMTVGIKQKDNVDAIVKKFSDNFDIMLFHYDGRVD 80 (294)
T ss_pred CCcCCCCCccccCCCCccccCCCceeeecCCCccccccCCCceEEEEEecHHHHhhhhHHHhhhccCceEEEEEecCCcC
Confidence 67899999999999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred ccccccccCcceEEEEeccccceeeccccCcchhccceEEEeeccccccCCCChHHHHHHHHHhCCcccCCCccCCCC-c
Q 023055 160 QWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNG-L 238 (288)
Q Consensus 160 ~W~d~eWs~~aIHVsa~kQtKWwfaKRFLHPDiVa~YdYIFlWDEDLgVd~F~~~rYl~Ivk~~gLEISQPALd~~s~-i 238 (288)
+|+|||||++||||+++|||||||||||||||||++|||||||||||+||||+|+|||+|||+|||||||||||++++ +
T Consensus 81 ~w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~ 160 (294)
T PF05212_consen 81 EWDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEI 160 (294)
T ss_pred chhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCcee
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999874 9
Q ss_pred ceeeeeeeCCceeeeeeccCCCCCCCCCCCCccceeeeehhcccccccc
Q 023055 239 TWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYALHLSLLSSLSLCC 287 (288)
Q Consensus 239 ~h~iT~R~~~~~vHr~~~~~~g~C~~~~~pPCtgfVE~MAPVFSRaA~~ 287 (288)
||+||+|+++++|||.+.+++++|+++|+||||||||||||||||+||.
T Consensus 161 ~~~iT~R~~~~~vhr~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awr 209 (294)
T PF05212_consen 161 HHPITKRRPDSEVHRKTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWR 209 (294)
T ss_pred eeeEEeecCCceeEeccCCCCCcCCCCCCCCcceEEEEecceechHHHH
Confidence 9999999999999997777778888999999999999999999999984
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00