Citrus Sinensis ID: 023055


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
MGTSHRSGFLKKTNDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGKEENINQISESPFSNGSSPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYALHLSLLSSLSLCCL
ccccccccccccccccHHHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHcccccEEEEEEEcccccccccccccccEEEEEEEcccEEEEEEEcccccccccccEEEEEccccccccccHHHHHHHHHHHcccccccccccccccccHHHcccccccEEEEEccccccccccccccccEEEEEEEEEccccEEEc
ccccccccccccccHHHHEEEEHHHHHHHHHHHEcccccEEEcccccccccccccccccHccccccccccccccccccEEEEccccccccccccccEEccccccEccccccccccccccccEEEEEEEcccHHHHHHHHHHHcccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHcccEEccccccccccEEEEEEEEccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHcc
mgtshrsgflkktndggrLIITTFIGVLIGYFVgrsfqsvsfskihlptsistsfdiagkeeninqisespfsngsspriyvstnprgaellppgivvsesdFFLRrlwgepsedlkkkpkYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFhydgqtsqwdefewsksAIHVSIRRQTKWwyakrflhpdvVAAYEYIFIwdedlgvehfngDKYMELVKKhgldisqpglepnngltwqmtkrrgdqevhkvteekpgwcsdphlppcaAYALHLSLLSSLSLCCL
mgtshrsgflkktndggrlIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGKEENINQIsespfsngsspRIYVSTNprgaellppgivVSESDFFLRRLWgepsedlkkkpkylltitvglnqkkniDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGldisqpglepnngltwqmTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYALHLSLLSSLSLCCL
MGTSHRSGFLKKTNDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGKEENINQISESPFSNGSSPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYALHlsllsslslccl
**************DGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDI*******************************AELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDI************W*******************GWCSDPHLPPCAAYALHLSLLSSLSLCC*
******************LIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGKEENI*******************************IVVSESDFF******************LLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYALHLSLLSSLSLCCL
MGTSHRSGFLKKTNDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGKEENINQISESPFSNGSSPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGLTWQMTKR**************GWCSDPHLPPCAAYALHLSLLSSLSLCCL
*************NDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGKEE*************SSPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYALHLSLLSSLSLCCL
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGTSHRSGFLKKTNDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGKEENINQISESPFSNGSSPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYALHLSLLSSLSLCCL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
255578131368 conserved hypothetical protein [Ricinus 0.920 0.720 0.722 1e-119
359478357380 PREDICTED: uncharacterized protein LOC10 0.951 0.721 0.752 1e-119
224106772382 predicted protein [Populus trichocarpa] 0.951 0.717 0.732 1e-118
297849098382 hypothetical protein ARALYDRAFT_888027 [ 0.951 0.717 0.684 1e-114
449456016 393 PREDICTED: uncharacterized protein LOC10 0.944 0.692 0.695 1e-114
297826107381 hypothetical protein ARALYDRAFT_481676 [ 0.947 0.716 0.693 1e-113
30683843374 uncharacterized protein [Arabidopsis tha 0.934 0.719 0.693 1e-112
20466346341 unknown protein [Arabidopsis thaliana] g 0.934 0.788 0.693 1e-112
18390845382 uncharacterized protein [Arabidopsis tha 0.951 0.717 0.699 1e-109
297746271356 unnamed protein product [Vitis vinifera] 0.868 0.702 0.756 1e-109
>gi|255578131|ref|XP_002529935.1| conserved hypothetical protein [Ricinus communis] gi|223530565|gb|EEF32443.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 198/274 (72%), Positives = 234/274 (85%), Gaps = 9/274 (3%)

Query: 1   MGTSHRSGFLKKTNDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGK 60
           MG+ HRSG  +KTND  RLI+TT +GV+ G+FVG SF SVS +KIH+P+   +S D++  
Sbjct: 1   MGSIHRSGLSRKTNDSARLIVTTILGVVFGFFVGISFPSVSLTKIHIPSGFISSTDMSST 60

Query: 61  EENINQISESPFSNGSSPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKP 120
           ++NI          G++P+IY   NPRGAELLPPGIVVSESDF+LRRLWGEPSEDLKKKP
Sbjct: 61  DQNIR---------GNAPKIYAPRNPRGAELLPPGIVVSESDFYLRRLWGEPSEDLKKKP 111

Query: 121 KYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTK 180
           KYL+T TVG +Q+ NI+  +KKFS+DF I+LFHYDG+ S+WD+FEWS++AIHVS+RRQTK
Sbjct: 112 KYLVTFTVGYDQRNNINAAIKKFSDDFTILLFHYDGRVSEWDQFEWSRTAIHVSVRRQTK 171

Query: 181 WWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGLTW 240
           WWYAKRFLHPD+VAAYEYIFIWDEDLGVEHFN DKY+ELVKKHGL+ISQPGLEPNNGLTW
Sbjct: 172 WWYAKRFLHPDIVAAYEYIFIWDEDLGVEHFNADKYIELVKKHGLEISQPGLEPNNGLTW 231

Query: 241 QMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYA 274
           QMTKRRGD+EVHK TEEKPGWCSDP LPPCAA+ 
Sbjct: 232 QMTKRRGDKEVHKDTEEKPGWCSDPRLPPCAAFV 265




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478357|ref|XP_002285240.2| PREDICTED: uncharacterized protein LOC100267242 isoform 1 [Vitis vinifera] gi|359478359|ref|XP_003632112.1| PREDICTED: uncharacterized protein LOC100267242 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224106772|ref|XP_002314280.1| predicted protein [Populus trichocarpa] gi|222850688|gb|EEE88235.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297849098|ref|XP_002892430.1| hypothetical protein ARALYDRAFT_888027 [Arabidopsis lyrata subsp. lyrata] gi|297338272|gb|EFH68689.1| hypothetical protein ARALYDRAFT_888027 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449456016|ref|XP_004145746.1| PREDICTED: uncharacterized protein LOC101216740 [Cucumis sativus] gi|449524368|ref|XP_004169195.1| PREDICTED: uncharacterized LOC101216740 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297826107|ref|XP_002880936.1| hypothetical protein ARALYDRAFT_481676 [Arabidopsis lyrata subsp. lyrata] gi|297326775|gb|EFH57195.1| hypothetical protein ARALYDRAFT_481676 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30683843|ref|NP_850118.1| uncharacterized protein [Arabidopsis thaliana] gi|30683846|ref|NP_850119.1| uncharacterized protein [Arabidopsis thaliana] gi|238479383|ref|NP_001154537.1| uncharacterized protein [Arabidopsis thaliana] gi|62320360|dbj|BAD94744.1| hypothetical protein [Arabidopsis thaliana] gi|330253009|gb|AEC08103.1| uncharacterized protein [Arabidopsis thaliana] gi|330253010|gb|AEC08104.1| uncharacterized protein [Arabidopsis thaliana] gi|330253011|gb|AEC08105.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|20466346|gb|AAM20490.1| unknown protein [Arabidopsis thaliana] gi|25084100|gb|AAN72175.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18390845|ref|NP_563805.1| uncharacterized protein [Arabidopsis thaliana] gi|79317279|ref|NP_001030994.1| uncharacterized protein [Arabidopsis thaliana] gi|15810567|gb|AAL07171.1| putative storage protein [Arabidopsis thaliana] gi|20259569|gb|AAM14127.1| putative storage protein [Arabidopsis thaliana] gi|332190112|gb|AEE28233.1| uncharacterized protein [Arabidopsis thaliana] gi|332190113|gb|AEE28234.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297746271|emb|CBI16327.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
TAIR|locus:2205140382 AT1G08040 [Arabidopsis thalian 0.947 0.714 0.701 5.3e-111
TAIR|locus:2057557374 AT2G28310 "AT2G28310" [Arabido 0.930 0.716 0.695 1.5e-108
TAIR|locus:2008640 404 AT1G67850 "AT1G67850" [Arabido 0.947 0.675 0.621 1.7e-100
TAIR|locus:2086721398 AT3G27470 "AT3G27470" [Arabido 0.722 0.522 0.703 2.1e-94
TAIR|locus:2031905401 AT1G13000 [Arabidopsis thalian 0.937 0.673 0.550 1.1e-85
TAIR|locus:2079291396 AT3G26440 [Arabidopsis thalian 0.937 0.681 0.561 3.1e-83
TAIR|locus:504956279 381 AT1G24570 [Arabidopsis thalian 0.909 0.687 0.521 1.9e-76
TAIR|locus:2124608 389 AT4G18530 "AT4G18530" [Arabido 0.840 0.622 0.388 2.4e-44
TAIR|locus:2202124 438 AT1G11170 [Arabidopsis thalian 0.631 0.415 0.463 6.6e-42
TAIR|locus:2008425 425 AT1G61240 [Arabidopsis thalian 0.625 0.423 0.463 1.7e-41
TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
 Identities = 193/275 (70%), Positives = 233/275 (84%)

Query:     1 MGTSHRSGFLKKTNDGGRLIITTFIGVLIGYFVGRSFQSVSFSKIHLPTSISTSFDIAGK 60
             MGT HRSG  ++TN+  +LIITT +GV+ G+FVG +    SF KI LP+ + +S D+A  
Sbjct:     1 MGTMHRSGAPRRTNENAKLIITTIVGVVFGFFVGITLPLGSFRKISLPSGLMSSLDVAMS 60

Query:    61 EENINQISESPFSNGS--SPRIYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKK 118
             +  +     SP   GS  SP+IYV TNP GAELLPPGI+V+E+DF+LRRLWGEPSEDLKK
Sbjct:    61 DGKLFSGGRSPEDIGSRKSPKIYVPTNPHGAELLPPGIIVAETDFYLRRLWGEPSEDLKK 120

Query:   119 KPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQ 178
             KPKYL+T TVG  Q+ NI+  VKKFSEDFQI+LFHYDG+T++WD+FEWSK+AIH+S ++Q
Sbjct:   121 KPKYLVTFTVGFEQRNNINAAVKKFSEDFQILLFHYDGRTTEWDQFEWSKNAIHISAKKQ 180

Query:   179 TKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNGL 238
             TKWWYAKRFLHPDVV+AYEYIFIWDEDLGVEHFN D+Y+ELVKKHGL+ISQPGLEPNNGL
Sbjct:   181 TKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADRYVELVKKHGLEISQPGLEPNNGL 240

Query:   239 TWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAY 273
             TW+MTKRRGD++VHK T+EKPGWCSDPHLPPCAA+
Sbjct:   241 TWEMTKRRGDRDVHKETKEKPGWCSDPHLPPCAAF 275




GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00024553001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (380 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
pfam05212294 pfam05212, DUF707, Protein of unknown function (DU 1e-125
>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707) Back     alignment and domain information
 Score =  359 bits (923), Expect = e-125
 Identities = 131/195 (67%), Positives = 163/195 (83%), Gaps = 1/195 (0%)

Query: 80  IYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRM 139
           I+V TNPRGAE LPPGIVVSESDF+LRRLWG P ED+  KPKYLL  TVG +QK N+D  
Sbjct: 1   IWVPTNPRGAERLPPGIVVSESDFYLRRLWGSPEEDVASKPKYLLAFTVGYSQKANVDAC 60

Query: 140 VKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYI 199
           VKKFS++F I+LFHYDG+T++WDE EWSK AIHVS ++QTKWW+AKRFLHPD+VA YEYI
Sbjct: 61  VKKFSDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYI 120

Query: 200 FIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNG-LTWQMTKRRGDQEVHKVTEEK 258
           F+WDEDLGV++F+ ++Y+++VKKHGL+ISQPGL+P+ G +TW++TKRRGD EVHK T EK
Sbjct: 121 FLWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREK 180

Query: 259 PGWCSDPHLPPCAAY 273
              C +   PPC  +
Sbjct: 181 GRCCDNSTGPPCTGF 195


This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 288
PF05212294 DUF707: Protein of unknown function (DUF707); Inte 100.0
>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana Back     alignment and domain information
Probab=100.00  E-value=1.9e-102  Score=722.83  Aligned_cols=208  Identities=60%  Similarity=1.121  Sum_probs=202.6

Q ss_pred             eeccCCCCCCCCCCCCccccCCccccccccCCCCcCcCCCCceEEEEEeccccccchhHHhhhcccCcEEEEEEECCCCC
Q 023055           80 IYVSTNPRGAELLPPGIVVSESDFFLRRLWGEPSEDLKKKPKYLLTITVGLNQKKNIDRMVKKFSEDFQIMLFHYDGQTS  159 (288)
Q Consensus        80 ~~~~~~p~g~e~LP~gIv~~~Sdl~~r~Lwg~p~~~~~~~~k~Lla~~VG~kqk~~Vd~~v~KFs~nF~vmLFHYDG~vd  159 (288)
                      |+++++|+|+|+||+|||+++||||||||||+|++|...++|||||||||+|||++||++|+||++||+||||||||+||
T Consensus         1 ~~~~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~~~~~k~Lla~~VG~kqk~~vd~~v~Kf~~nF~i~LfhYDg~vd   80 (294)
T PF05212_consen    1 IWVPCNPRGAERLPPGIVVRESDLELRPLWGNPSEDLPKKPKYLLAMTVGIKQKDNVDAIVKKFSDNFDIMLFHYDGRVD   80 (294)
T ss_pred             CCcCCCCCccccCCCCccccCCCceeeecCCCccccccCCCceEEEEEecHHHHhhhhHHHhhhccCceEEEEEecCCcC
Confidence            67899999999999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             ccccccccCcceEEEEeccccceeeccccCcchhccceEEEeeccccccCCCChHHHHHHHHHhCCcccCCCccCCCC-c
Q 023055          160 QWDEFEWSKSAIHVSIRRQTKWWYAKRFLHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNNG-L  238 (288)
Q Consensus       160 ~W~d~eWs~~aIHVsa~kQtKWwfaKRFLHPDiVa~YdYIFlWDEDLgVd~F~~~rYl~Ivk~~gLEISQPALd~~s~-i  238 (288)
                      +|+|||||++||||+++|||||||||||||||||++|||||||||||+||||+|+|||+|||+|||||||||||++++ +
T Consensus        81 ~w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~  160 (294)
T PF05212_consen   81 EWDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEI  160 (294)
T ss_pred             chhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCcee
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999874 9


Q ss_pred             ceeeeeeeCCceeeeeeccCCCCCCCCCCCCccceeeeehhcccccccc
Q 023055          239 TWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAYALHLSLLSSLSLCC  287 (288)
Q Consensus       239 ~h~iT~R~~~~~vHr~~~~~~g~C~~~~~pPCtgfVE~MAPVFSRaA~~  287 (288)
                      ||+||+|+++++|||.+.+++++|+++|+||||||||||||||||+||.
T Consensus       161 ~~~iT~R~~~~~vhr~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awr  209 (294)
T PF05212_consen  161 HHPITKRRPDSEVHRKTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWR  209 (294)
T ss_pred             eeeEEeecCCceeEeccCCCCCcCCCCCCCCcceEEEEecceechHHHH
Confidence            9999999999999997777778888999999999999999999999984




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00