Citrus Sinensis ID: 023137

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
Protein Sequence
MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccccccHHHHcccccHHHEEEEccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
maehapehessdkSLVEKITdkihghdssssdsdddkpssidAFKSKVFRlfgrekpihhvlgagkpadIFLWRnkkisagvLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWsnastfinksppeipvvtlpeKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRipkgalkkkd
Flexible Loop (DISEMBL)
maehapehessdksLVEKITDKIhghdssssdsdddkpssIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKkvlsripkgalkkkd
Low Complexity Region (SEG)
MAEHAPEHESSDKSLVEKITdkihghdssssdsdddkpssidAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD
Disordered region (IsUnstruct)
*******************************************FKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSR**********
Disordered Region (DISOPRED)
***************************************************************AGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSR***G******
Disordered Region (DISEMBL)
*************SLVEKITDKI***************SSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD
Disordered Region (DISPRO)
*********************************************SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPK*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	287	2.2.26 [Sep-21-2011]
Q9SH59	255	Reticulon-like protein B3	yes	no	0.871	0.980	0.592	2e-81
O82352	255	Reticulon-like protein B5	no	no	0.871	0.980	0.543	3e-79
Q9FFS0	257	Reticulon-like protein B4	no	no	0.864	0.964	0.557	9e-79
Q9SUR3	275	Reticulon-like protein B1	no	no	0.707	0.738	0.598	1e-74
Q9SUT9	271	Reticulon-like protein B2	no	no	0.829	0.878	0.533	1e-72
Q6DBN4	253	Reticulon-like protein B6	no	no	0.871	0.988	0.533	3e-72
Q9SS37	247	Reticulon-like protein B8	no	no	0.808	0.939	0.396	5e-52
Q9M145	244	Reticulon-like protein B7	no	no	0.710	0.836	0.443	5e-49
Q9LJQ5	225	Reticulon-like protein B9	no	no	0.752	0.96	0.364	5e-40
Q6NPD8	201	Reticulon-like protein B1	no	no	0.679	0.970	0.320	5e-30

>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1

 Score =  302 bits (773), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 170/287 (59%), Positives = 202/287 (70%), Gaps = 37/287 (12%)

Query: 5   APEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDA-FKSKVFRLFGREKPIHHVLG 63
           A EH+  ++S++EKI++KIHGHD SSS S D       A  K+K++RLFGRE+P+H + G
Sbjct: 2   AEEHKH-EESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFG 60

Query: 64  AGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNAST 123
            GKPADIFLWRNKK+S GVLG AT  W+LFELLEY+L+TL  HISIL+LAVLFLWS+AST
Sbjct: 61  GGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSAST 120

Query: 124 FINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLS 183
           FI+KSP  IP V +PE  VL+ AS LR EINR   VLR+IASGRDLKKFL VIAGLW+LS
Sbjct: 121 FIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLS 180

Query: 184 IVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEK 243
            VG+ CNF+TL YI                                  VLL T+PV+YEK
Sbjct: 181 KVGSSCNFLTLIYIAT--------------------------------VLLFTIPVLYEK 208

Query: 244 YEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGA---LKKKD 287
           YEDK+D FGEKA  EIKKQY  FD KVL KV+S+IPKGA   +KKKD
Sbjct: 209 YEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKGAFAFIKKKD 255

Arabidopsis thaliana (taxid: 3702)

>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1

 Score =  295 bits (755), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 156/287 (54%), Positives = 202/287 (70%), Gaps = 37/287 (12%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDD-DKPSSIDAFKSKVFRLFGREKPIH 59
           MAE   +   +++SL+EKI++KIH HDSSSS   + +KP S  A K+K++R+FGREKP+H
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVH 60

Query: 60  HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
            VLG GKPAD+FLWR+KK+S  VLG ATA+WVLFEL+EYHL++L+CHISIL+L  LFLWS
Sbjct: 61  KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120

Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
           NA T INK+ P+IP + +PE+  L  AS+LR E+N+A  +LR IA GRDLKKFL V+ GL
Sbjct: 121 NAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGL 180

Query: 180 WLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPV 239
           W++S+VGNW NF+TL YI                     C           FV+LHTVP+
Sbjct: 181 WIISVVGNWFNFLTLVYI---------------------C-----------FVILHTVPM 208

Query: 240 IYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           +YEK+EDK+D   EKA  E++KQY VFDE    KVLS+IP  +LK K
Sbjct: 209 LYEKHEDKVDPLAEKAMKELQKQYVVFDE----KVLSKIPIASLKAK 251

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1

 Score =  293 bits (750), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 159/285 (55%), Positives = 194/285 (68%), Gaps = 37/285 (12%)

Query: 7   EHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSK-----VFRLFGREKPIHHV 61
           E    ++S++EKI +KIHGH  SSS SD D      +  S      ++RLFGREKP+H V
Sbjct: 3   EDHKHEESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKV 62

Query: 62  LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNA 121
           LG GKPADIFLWRNKK+S GVLG  TA WVLFEL EYHL+  +CH +I +LA LFLWSNA
Sbjct: 63  LGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNA 122

Query: 122 STFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWL 181
            TFI+KS P IP V +PE  +L+  S LR EINR L +LR IASG+D+KKF+ VIAGLW+
Sbjct: 123 CTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWV 182

Query: 182 LSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIY 241
           LSI+G+  NF+TLFY                                T  VLL T+PV+Y
Sbjct: 183 LSIIGSCYNFLTLFY--------------------------------TATVLLFTIPVLY 210

Query: 242 EKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           EKYEDK+D++GEKA  EIKKQYAV DEKVL+KV+S+IP+GAL KK
Sbjct: 211 EKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKK 255

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1

 Score =  280 bits (715), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 143/239 (59%), Positives = 170/239 (71%), Gaps = 36/239 (15%)

Query: 48  VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI 107
           V+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+
Sbjct: 70  VYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHV 129

Query: 108 SILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGR 167
            I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR  + LREIASGR
Sbjct: 130 MIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGR 189

Query: 168 DLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSF 227
           DLKKFL  IAGLW+LSI+G   NF+TL YI                              
Sbjct: 190 DLKKFLIAIAGLWVLSILGGCFNFLTLAYIA----------------------------- 220

Query: 228 ETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
               VLL TVP+ Y+KYEDK+D  GEKA IE+KKQYAV DE    KVLS+IP G LK K
Sbjct: 221 ---LVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDE----KVLSKIPLGPLKNK 272

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/281 (53%), Positives = 191/281 (67%), Gaps = 43/281 (15%)

Query: 13  KSLVEKITDKIHGHDSSS-------SDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAG 65
           +SL+EK+++KIH    SS        +      SS  + KSKV+RLFGRE+P+H VLG G
Sbjct: 24  ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 66  KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFI 125
           KPADIF+W++KK+S GV GGAT  WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 126 NKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIV 185
           +KSPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL  IAGLW+LSI+
Sbjct: 144 HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSIL 203

Query: 186 GNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYE 245
           G   +F+TL YI                                  VLL TVP+ Y+KYE
Sbjct: 204 GGCYSFLTLAYIA--------------------------------LVLLFTVPLFYDKYE 231

Query: 246 DKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           DK+DS+GEKA  E+KKQYAV D     KV S+IP+G LK K
Sbjct: 232 DKVDSYGEKAMAELKKQYAVLD----AKVFSKIPRGPLKDK 268

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1

 Score =  271 bits (694), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/287 (53%), Positives = 193/287 (67%), Gaps = 37/287 (12%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDD-KPSSIDAFKSKVFRLFGREKPIH 59
           MAE   +    ++SL+EKI DKIH HDSSSS   +  KP S  A K+K++RLFGREKP+H
Sbjct: 1   MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVH 60

Query: 60  HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
            VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL S
Sbjct: 61  KVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLS 120

Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
           NA  F+NK+PP+IP + + E+  L   SALR E+N+A  +LR IA GRDLKKFL V+ GL
Sbjct: 121 NAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGL 180

Query: 180 WLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPV 239
           W++S+VGNW NF+TL YI                     C           FV+LHTVP+
Sbjct: 181 WIISVVGNWFNFLTLVYI---------------------C-----------FVVLHTVPM 208

Query: 240 IYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           +YEK+EDK+D   EK   E+KK Y VFDE    KVLS++P  +LK K
Sbjct: 209 LYEKHEDKVDPVAEKTLKELKKHYMVFDE----KVLSKLPVASLKAK 251

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1

 Score =  204 bits (519), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 43/275 (15%)

Query: 15  LVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWR 74
           LV+  T+ +  +   SS  + +     D+  S+  RLF R+KPIHHVLG GK AD+ LWR
Sbjct: 14  LVDNFTETVQKNKHGSSFFEQE-----DSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWR 68

Query: 75  NKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPV 134
           NKKISA VL GATA+WVLFE + +H ++LVC+  +L +   F+WSNAS F+N+S   +P 
Sbjct: 69  NKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPR 128

Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
           + LP+ F  E   A+  E+NR L  L+++A   +LK+FL  + GLW+ ++VG+ CNF+T+
Sbjct: 129 LVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTV 188

Query: 195 FYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEK 254
            YIG                                FV  HT+PV+YE+YED++D F + 
Sbjct: 189 LYIG--------------------------------FVGAHTMPVLYERYEDEVDGFMDS 216

Query: 255 ATIEIKKQYAVFDEKVLKKVLSRIPKG--ALKKKD 287
             ++    Y   D       LSRIP G   LKK++
Sbjct: 217 MIMKFHSHYKKLD----TGFLSRIPSGKFGLKKRE 247

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3 SV=2

 Score =  194 bits (494), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 106/239 (44%), Positives = 147/239 (61%), Gaps = 35/239 (14%)

Query: 36  DKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFEL 95
           +KP S     + ++R+FGRE+PIH VLG GKPAD+ LWR+KK++ G+L   T +W+LF  
Sbjct: 39  EKPDSPVPINAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGF 98

Query: 96  LEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINR 155
               L+T +C  SIL L + FLWSNA   +NKSP  +  + +PEK +L+ ASA+ +E+N 
Sbjct: 99  GGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNC 155

Query: 156 ALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVF 215
           A A LR IA  RD+K F+  + GLWL+S++GNW +F++L YI                  
Sbjct: 156 AFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYI------------------ 197

Query: 216 LLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKV 274
                          FVL+HTVP++YEKYED+ID   EKA IE+KK Y VF+ K L K+
Sbjct: 198 --------------CFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKI 242

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1

 Score =  164 bits (416), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 136/258 (52%), Gaps = 42/258 (16%)

Query: 29  SSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATA 88
           SSSDS+D++         K  +LF R++ IH + G GK ADI LWR  KI+A ++ G + 
Sbjct: 7   SSSDSEDERTIH------KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSI 60

Query: 89  MWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASA 148
           +W L E++EY+ ITL+CH S+ S+   F+WS AS F+N   P IP V L E    + A +
Sbjct: 61  LWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARS 120

Query: 149 LRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAY 208
                N+ L  L ++A GRD   F      L+++SI+G + NFV L +IG          
Sbjct: 121 FHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIG---------- 170

Query: 209 FLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDE 268
                                 FV + T+PV+YE YED +D+   K   ++KK Y    +
Sbjct: 171 ----------------------FVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLY----K 204

Query: 269 KVLKKVLSRIPKGALKKK 286
           KV   VLS+IP+G +K K
Sbjct: 205 KVDTNVLSKIPRGTVKNK 222

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1

 Score =  131 bits (330), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 122/234 (52%), Gaps = 39/234 (16%)

Query: 55  EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAV 114
           E+ +H  +  G  AD+ +W+N++    +LG  T +W LFE   Y     V +  +LS+ +
Sbjct: 2   EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61

Query: 115 LFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG 174
           LFLW+ ++   N+  P++P + + E+FV   A A+R  IN  LAV REI  GR+ K+   
Sbjct: 62  LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121

Query: 175 VIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLL 234
           V   LW +S VGN+ NF+T+ Y+G   SL+                              
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLL------------------------------ 151

Query: 235 HTVPVIYEKYEDKIDSFGEKATIE---IKKQYAVFDEKVLKKVLSRIPKGALKK 285
             +P +YE+Y+D ID   EK ++    I+ QY   DE++L+K++++ P   +KK
Sbjct: 152 --IPFLYERYQDLID---EKLSLTHRVIQTQYRKIDERLLQKIIAK-PTNKIKK 199

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
359474299	256	PREDICTED: uncharacterized protein LOC10	0.867	0.972	0.643	2e-91
297742260	252	unnamed protein product [Vitis vinifera]	0.867	0.988	0.643	3e-91
358248944	254	uncharacterized protein LOC100811024 [Gl	0.871	0.984	0.662	4e-91
356513327	254	PREDICTED: reticulon-like protein B2-lik	0.871	0.984	0.662	4e-91
255645926	253	unknown [Glycine max]	0.871	0.988	0.657	1e-90
359489676	255	PREDICTED: reticulon-like protein B1 iso	0.871	0.980	0.659	2e-90
255541732	253	conserved hypothetical protein [Ricinus	0.860	0.976	0.620	6e-89
217072252	260	unknown [Medicago truncatula] gi|3884968	0.871	0.961	0.614	1e-88
192910708	254	24 kDa seed maturation protein [Elaeis g	0.871	0.984	0.618	4e-88
255537629	260	conserved hypothetical protein [Ricinus	0.871	0.961	0.634	1e-87

>gi|359474299|ref|XP_002277080.2| PREDICTED: uncharacterized protein LOC100267262 [Vitis vinifera]

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 184/286 (64%), Positives = 218/286 (76%), Gaps = 37/286 (12%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHH 60
           MA+H     S  +S++EKI++KIHGHDSSSSDSD++K S   AFK+KV+R+FGREKP+H 
Sbjct: 5   MADHEDSTPSPVESMMEKISEKIHGHDSSSSDSDNEKSSP-SAFKAKVYRIFGREKPVHK 63

Query: 61  VLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN 120
           VLG GKPAD+ LWRNKKISAGVLGGATA+W+LFELLEYHL+TLVCH SIL+LA+LFLWSN
Sbjct: 64  VLGGGKPADVVLWRNKKISAGVLGGATAVWILFELLEYHLLTLVCHCSILALAILFLWSN 123

Query: 121 ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLW 180
           A+TFINK+PP IP V +PE  VL+FASALR EINR   +LR +ASG+DLKKFL VIAGLW
Sbjct: 124 ATTFINKAPPHIPEVHIPEDPVLQFASALRIEINRGFTLLRNVASGKDLKKFLSVIAGLW 183

Query: 181 LLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVI 240
           ++SIVG+WCNF+TLFYI                                VFVLLHTVPV+
Sbjct: 184 VVSIVGSWCNFLTLFYI--------------------------------VFVLLHTVPVL 211

Query: 241 YEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           YEKYED +DSF EKA +EIK+QYAVFD     KVLSRIP+G LK K
Sbjct: 212 YEKYEDPVDSFAEKAMVEIKRQYAVFDA----KVLSRIPRGPLKDK 253

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742260|emb|CBI34409.3| unnamed protein product [Vitis vinifera]

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 184/286 (64%), Positives = 218/286 (76%), Gaps = 37/286 (12%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHH 60
           MA+H     S  +S++EKI++KIHGHDSSSSDSD++K S   AFK+KV+R+FGREKP+H 
Sbjct: 1   MADHEDSTPSPVESMMEKISEKIHGHDSSSSDSDNEKSSP-SAFKAKVYRIFGREKPVHK 59

Query: 61  VLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN 120
           VLG GKPAD+ LWRNKKISAGVLGGATA+W+LFELLEYHL+TLVCH SIL+LA+LFLWSN
Sbjct: 60  VLGGGKPADVVLWRNKKISAGVLGGATAVWILFELLEYHLLTLVCHCSILALAILFLWSN 119

Query: 121 ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLW 180
           A+TFINK+PP IP V +PE  VL+FASALR EINR   +LR +ASG+DLKKFL VIAGLW
Sbjct: 120 ATTFINKAPPHIPEVHIPEDPVLQFASALRIEINRGFTLLRNVASGKDLKKFLSVIAGLW 179

Query: 181 LLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVI 240
           ++SIVG+WCNF+TLFYI                                VFVLLHTVPV+
Sbjct: 180 VVSIVGSWCNFLTLFYI--------------------------------VFVLLHTVPVL 207

Query: 241 YEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           YEKYED +DSF EKA +EIK+QYAVFD     KVLSRIP+G LK K
Sbjct: 208 YEKYEDPVDSFAEKAMVEIKRQYAVFDA----KVLSRIPRGPLKDK 249

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248944|ref|NP_001239711.1| uncharacterized protein LOC100811024 [Glycine max] gi|255641581|gb|ACU21063.1| unknown [Glycine max]

 Score =  340 bits (872), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 190/287 (66%), Positives = 212/287 (73%), Gaps = 37/287 (12%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSD-DDKPSSIDAFKSKVFRLFGREKPIH 59
           MAEH    E   +SL+EKI+ KIH HDSSSS    ++K S+ D+ KSKVFRLFGREKPIH
Sbjct: 1   MAEHHEHEEVKGESLLEKISGKIHDHDSSSSSDSDNEKTSASDSLKSKVFRLFGREKPIH 60

Query: 60  HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
           HVLG GKPAD+FLWRNKKISA  LG ATA+WVLFELLEYHL+TLVCH  IL LAVLFLWS
Sbjct: 61  HVLGGGKPADVFLWRNKKISASTLGVATAIWVLFELLEYHLLTLVCHFLILGLAVLFLWS 120

Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
           NASTFINKSPP+IP V +PEK VLEFASALR EINRA A+LR+IASGRDLKKFL VIAGL
Sbjct: 121 NASTFINKSPPKIPQVHIPEKPVLEFASALRVEINRAFALLRDIASGRDLKKFLSVIAGL 180

Query: 180 WLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPV 239
           W+ SI+G+W NF+TLFYI                                 FVLLHTVPV
Sbjct: 181 WVFSILGSWANFLTLFYIA--------------------------------FVLLHTVPV 208

Query: 240 IYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           +YEKYED +DSFG KA  EIKKQYAVFD     KVLS+IP+G LK K
Sbjct: 209 LYEKYEDHVDSFGGKAIAEIKKQYAVFDA----KVLSKIPRGPLKDK 251

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513327|ref|XP_003525365.1| PREDICTED: reticulon-like protein B2-like isoform 1 [Glycine max]

 Score =  340 bits (872), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 190/287 (66%), Positives = 212/287 (73%), Gaps = 37/287 (12%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSD-DDKPSSIDAFKSKVFRLFGREKPIH 59
           MAEH    E   +SL+EKI+ KIH HDSSSS    +DK S+ D+FKS VFRLFGREKPIH
Sbjct: 1   MAEHHEHEEVKGESLLEKISGKIHDHDSSSSSDSDNDKTSATDSFKSNVFRLFGREKPIH 60

Query: 60  HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
           HVLG GKPAD+FLWRNKKISA  LG ATA+WVLFELLEYHL+TLVCH  IL+LA LFLWS
Sbjct: 61  HVLGGGKPADVFLWRNKKISASTLGVATAIWVLFELLEYHLLTLVCHFLILALAGLFLWS 120

Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
           NASTFINKSPP+IP V +PE+ VL+FASALR EINRA AVLR+IASGRDLKKFL VIAGL
Sbjct: 121 NASTFINKSPPKIPQVHIPEEPVLKFASALRIEINRAFAVLRDIASGRDLKKFLSVIAGL 180

Query: 180 WLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPV 239
           W+ SI+G W NF+TLFYI                                 FVLLHTVPV
Sbjct: 181 WVFSILGCWANFLTLFYIA--------------------------------FVLLHTVPV 208

Query: 240 IYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           +YEKYED +DSFGEKA  EIKKQYAVFD     KVLS+IP+G LK K
Sbjct: 209 LYEKYEDHVDSFGEKAIAEIKKQYAVFDA----KVLSKIPRGPLKDK 251

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645926|gb|ACU23452.1| unknown [Glycine max]

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 188/286 (65%), Positives = 209/286 (73%), Gaps = 36/286 (12%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHH 60
           MAEH    E   +SL+EKI        SSSSDSD+DK S+ D+FKS VFRLFGREKPIHH
Sbjct: 1   MAEHHEHEEVKGESLLEKIGKIHDHDSSSSSDSDNDKTSATDSFKSNVFRLFGREKPIHH 60

Query: 61  VLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN 120
           VLG GKPAD+FLWRNKKISA  LG ATA+WVLFELLEYHL+TLVCH  IL+LA LFLWSN
Sbjct: 61  VLGGGKPADVFLWRNKKISASTLGVATAIWVLFELLEYHLLTLVCHFLILALAGLFLWSN 120

Query: 121 ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLW 180
           ASTFINKSPP+IP V +PE+ VL+FASALR EINRA AVLR+IASGRDLKKFL VIAGLW
Sbjct: 121 ASTFINKSPPKIPQVHIPEEPVLKFASALRIEINRAFAVLRDIASGRDLKKFLSVIAGLW 180

Query: 181 LLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVI 240
           + SI+G W NF+TLFYI                                 FVLLHTVPV+
Sbjct: 181 VFSILGCWANFLTLFYIA--------------------------------FVLLHTVPVL 208

Query: 241 YEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           YEKYED +DSFGEKA  EIKKQYAVFD     KVLS+IP+G LK K
Sbjct: 209 YEKYEDHVDSFGEKAIAEIKKQYAVFDA----KVLSKIPRGPLKDK 250

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489676|ref|XP_003633964.1| PREDICTED: reticulon-like protein B1 isoform 2 [Vitis vinifera] gi|359489678|ref|XP_003633965.1| PREDICTED: reticulon-like protein B1 isoform 3 [Vitis vinifera] gi|297745364|emb|CBI40444.3| unnamed protein product [Vitis vinifera]

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 190/288 (65%), Positives = 213/288 (73%), Gaps = 38/288 (13%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDD--KPSSIDAFKSKVFRLFGREKPI 58
           MAEHA    ++ +SL+EKITDK+ GHDSSSS SD D  KP+S    K+KVFRLFGREKP+
Sbjct: 1   MAEHAEGSGAASESLLEKITDKLQGHDSSSSGSDSDSDKPASPSPIKAKVFRLFGREKPV 60

Query: 59  HHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLW 118
           H VLG GK AD+FLWRNKKISAGVLGGATAMWVLFELLEYHL+TLVCHI ILSLA+LFLW
Sbjct: 61  HTVLGGGKHADVFLWRNKKISAGVLGGATAMWVLFELLEYHLLTLVCHILILSLAILFLW 120

Query: 119 SNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
           SNA+TFINKSPP IP V +PE   L+  +ALR EIN   AVLR+IASGRDLKKFL +IAG
Sbjct: 121 SNATTFINKSPPRIPEVHIPEDPFLQAVNALRIEINCGFAVLRDIASGRDLKKFLIIIAG 180

Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
           LW+LSI+G+ CNF+TLFYI                                 FVLLHTVP
Sbjct: 181 LWVLSILGSCCNFLTLFYI--------------------------------TFVLLHTVP 208

Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           VIYEKYED+ID F EKATIEIKKQYAVFD     KVLS+IPK  LK K
Sbjct: 209 VIYEKYEDRIDPFAEKATIEIKKQYAVFDA----KVLSKIPKVPLKYK 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541732|ref|XP_002511930.1| conserved hypothetical protein [Ricinus communis] gi|223549110|gb|EEF50599.1| conserved hypothetical protein [Ricinus communis]

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 180/290 (62%), Positives = 209/290 (72%), Gaps = 43/290 (14%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDD----DKPSSIDAFKSKVFRLFGREK 56
           MAEH    ES  +S++EKI++KIH HDSSSS   +     KP+S  + K+K+FRLFGRE+
Sbjct: 1   MAEHP---ESPIESVMEKISEKIHAHDSSSSSDSESDSEKKPTSPSSVKAKIFRLFGRER 57

Query: 57  PIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLF 116
           P+HHVLG GKPAD+FLWRNKKISA VLG ATA+W+LFEL+EYHL+TLVCHISIL+LA+LF
Sbjct: 58  PVHHVLGGGKPADVFLWRNKKISASVLGTATAIWILFELIEYHLLTLVCHISILTLAILF 117

Query: 117 LWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVI 176
           LWSNA TFINK+PP IP V +PE+ VL+ ASAL  EIN   AVLR IASG+DLKKFL VI
Sbjct: 118 LWSNAHTFINKTPPRIPQVHIPEEPVLQVASALTMEINHGFAVLRSIASGKDLKKFLVVI 177

Query: 177 AGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHT 236
           A  W LSIVG WCNF+TLFYI                                 FVLLHT
Sbjct: 178 AAFWALSIVGCWCNFLTLFYI--------------------------------TFVLLHT 205

Query: 237 VPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           VPV+YEKYEDK+D F EKA IEIKKQYA+FD     KVLS+IP GALK K
Sbjct: 206 VPVLYEKYEDKVDPFAEKAMIEIKKQYAMFDA----KVLSKIPVGALKAK 251

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072252|gb|ACJ84486.1| unknown [Medicago truncatula] gi|388496820|gb|AFK36476.1| unknown [Medicago truncatula]

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 180/293 (61%), Positives = 213/293 (72%), Gaps = 43/293 (14%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSS-------SDSDDDKPSSIDAFKSKVFRLFG 53
           MA+H    E   +SL++KI+ KIH H  SS       +D  + K SS  + K+KVFRLFG
Sbjct: 1   MADHNEHEEVKSESLLDKISGKIHDHHDSSSSSSDSDNDKKEKKVSSPTSLKNKVFRLFG 60

Query: 54  REKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLA 113
           REKP+H+VLG GKPAD+FLWRNKKISA  LG ATA+WVLFELLEYHL+TL+ H++IL+LA
Sbjct: 61  REKPLHNVLGGGKPADVFLWRNKKISATTLGVATALWVLFELLEYHLLTLISHLAILALA 120

Query: 114 VLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFL 173
           VLFLWSNASTFINKSPP+IP V +PE+ VL+ ASA+R EINRA A+LR+IASGRDLK+FL
Sbjct: 121 VLFLWSNASTFINKSPPKIPQVHIPEEPVLQIASAIRIEINRAFAILRDIASGRDLKQFL 180

Query: 174 GVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVL 233
            VIAGLW+LSIVG+W NF+TLFYI                                 FVL
Sbjct: 181 SVIAGLWVLSIVGSWTNFLTLFYIA--------------------------------FVL 208

Query: 234 LHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           LHTVPV+YEKYED++DSFGEKA  E KKQYAVFDE    KVLS+IPKG LK K
Sbjct: 209 LHTVPVLYEKYEDRVDSFGEKALHEFKKQYAVFDE----KVLSKIPKGPLKDK 257

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192910708|gb|ACF06462.1| 24 kDa seed maturation protein [Elaeis guineensis]

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 178/288 (61%), Positives = 211/288 (73%), Gaps = 38/288 (13%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPS--SIDAFKSKVFRLFGREKPI 58
           MAEH+ E  S  +SL+EKI +K+HG DSSSS   D++ S  S  + K+K++RLFGRE+P+
Sbjct: 1   MAEHSEEASSKPESLMEKIAEKLHGDDSSSSSDSDNEKSEPSASSVKAKIYRLFGREEPV 60

Query: 59  HHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLW 118
           H VLG GKPAD+FLWRNKKISAGVLGGATA+WVLFELL+YHL+TLV H  +LSLA+LFLW
Sbjct: 61  HKVLGGGKPADVFLWRNKKISAGVLGGATAVWVLFELLDYHLLTLVGHCLVLSLAILFLW 120

Query: 119 SNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
           SNASTFINK PP IP V++PE   +  A +LRYEINRA AVLR+IASGRDLKKFL VIAG
Sbjct: 121 SNASTFINKIPPHIPEVSIPEDVAINVALSLRYEINRAFAVLRDIASGRDLKKFLAVIAG 180

Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
           LW+LSI+G+ CNF+TLFYI                                +FV LHTVP
Sbjct: 181 LWVLSILGSCCNFLTLFYI--------------------------------LFVTLHTVP 208

Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           V+YEKYEDK+DSF EKA  EIKKQY VFD     KVLS+IP+G LK K
Sbjct: 209 VLYEKYEDKVDSFAEKAMAEIKKQYVVFD----AKVLSKIPRGPLKDK 252

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537629|ref|XP_002509881.1| conserved hypothetical protein [Ricinus communis] gi|223549780|gb|EEF51268.1| conserved hypothetical protein [Ricinus communis]

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 186/293 (63%), Positives = 218/293 (74%), Gaps = 43/293 (14%)

Query: 1   MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDS--DDDK-----PSSIDAFKSKVFRLFG 53
           MA+     ES  +SL++KI++KIHGHDSSSS    +D+K     PSS  + KSK++RLFG
Sbjct: 1   MADEHHHEESKGESLMDKISEKIHGHDSSSSSDSDNDEKLKPKSPSSPSSIKSKIYRLFG 60

Query: 54  REKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLA 113
           REKP+HHVLG GKPADIFLWRNKK+SAGVLG ATA+WVLFEL+EYHL+TL+CH  IL+LA
Sbjct: 61  REKPVHHVLGGGKPADIFLWRNKKVSAGVLGFATAVWVLFELIEYHLLTLICHGFILALA 120

Query: 114 VLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFL 173
           +LFLWSNASTFINKSPP IP V +PE+ VL+ A+ALR EIN A A+LR+IASGRDLKKFL
Sbjct: 121 ILFLWSNASTFINKSPPHIPEVHIPEEPVLQVAAALRMEINYAFAILRDIASGRDLKKFL 180

Query: 174 GVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVL 233
            VIAGLW+LSIVG+WCNF+TLFYI                                 FVL
Sbjct: 181 SVIAGLWVLSIVGSWCNFLTLFYIA--------------------------------FVL 208

Query: 234 LHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
           LHTVPV YEKYEDK+D+F EKA IEIKKQYAVFD     KVLS+IP+G LK K
Sbjct: 209 LHTVPVFYEKYEDKVDAFAEKAAIEIKKQYAVFD----AKVLSKIPRGPLKDK 257

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
TAIR|locus:2128238	271	BTI2 "VIRB2-interacting protei	0.540	0.571	0.670	1.8e-72
TAIR|locus:2128494	275	BTI1 "VIRB2-interacting protei	0.540	0.563	0.703	9.6e-57
TAIR|locus:2160447	257	BTI3 "VIRB2-interacting protei	0.682	0.762	0.568	6.8e-56
TAIR|locus:2062882	255	AT2G46170 [Arabidopsis thalian	0.686	0.772	0.550	1.1e-55
TAIR|locus:2082772	264	AT3G61560 [Arabidopsis thalian	0.442	0.481	0.523	1.8e-46
TAIR|locus:2089663	225	AT3G18260 "AT3G18260" [Arabido	0.529	0.675	0.414	9.4e-40
TAIR|locus:2049077	201	AT2G15280 "AT2G15280" [Arabido	0.616	0.880	0.333	5.2e-26
TAIR|locus:2080315	203	AT3G54120 "AT3G54120" [Arabido	0.644	0.911	0.297	8.4e-26
TAIR|locus:2090609	218	AT3G19460 "AT3G19460" [Arabido	0.627	0.825	0.311	7.2e-20
TAIR|locus:2046783	206	RTNLB13 "AT2G23640" [Arabidops	0.452	0.631	0.292	6.4e-19

TAIR|locus:2128238 BTI2 "VIRB2-interacting protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
 Identities = 104/155 (67%), Positives = 132/155 (85%)

Query:    43 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLIT 102
             + KSKV+RLFGRE+P+H VLG GKPADIF+W++KK+S GV GGAT  WVLFEL+EYHL+T
Sbjct:    61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120

Query:   103 LVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLRE 162
             L+CH+ I++LAVLFLWSNA+ FI+KSPP+IP V +PE+ +L+ AS LR EINR ++ LRE
Sbjct:   121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180

Query:   163 IASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYI 197
             IASGRD+KKFL  IAGLW+LSI+G   +F+TL YI
Sbjct:   181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYI 215

GO:0005634 "nucleus" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2128494 BTI1 "VIRB2-interacting protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 109/155 (70%), Positives = 132/155 (85%)

Query:    43 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLIT 102
             + KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+T
Sbjct:    65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLT 124

Query:   103 LVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLRE 162
             L+CH+ I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR  + LRE
Sbjct:   125 LLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLRE 184

Query:   163 IASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYI 197
             IASGRDLKKFL  IAGLW+LSI+G   NF+TL YI
Sbjct:   185 IASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYI 219

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

TAIR|locus:2160447 BTI3 "VIRB2-interacting protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 112/197 (56%), Positives = 135/197 (68%)

Query:     1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXX-XXXXXXXAFKSKVFRLFGREKPIH 59
             M E     ES  + +VEKI                        +FKSK++RLFGREKP+H
Sbjct:     1 MVEDHKHEESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVH 60

Query:    60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
              VLG GKPADIFLWRNKK+S GVLG  TA WVLFEL EYHL+  +CH +I +LA LFLWS
Sbjct:    61 KVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWS 120

Query:   120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
             NA TFI+KS P IP V +PE  +L+  S LR EINR L +LR IASG+D+KKF+ VIAGL
Sbjct:   121 NACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGL 180

Query:   180 WLLSIVGNWCNFVTLFY 196
             W+LSI+G+  NF+TLFY
Sbjct:   181 WVLSIIGSCYNFLTLFY 197

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2062882 AT2G46170 [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 109/198 (55%), Positives = 143/198 (72%)

Query:     1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXX-XAFKSKVFRLFGREKPIH 59
             MAE   +   +++SL+EKI+                       A K+K++R+FGREKP+H
Sbjct:     1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVH 60

Query:    60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
              VLG GKPAD+FLWR+KK+S  VLG ATA+WVLFEL+EYHL++L+CHISIL+L  LFLWS
Sbjct:    61 KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120

Query:   120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
             NA T INK+ P+IP + +PE+  L  AS+LR E+N+A  +LR IA GRDLKKFL V+ GL
Sbjct:   121 NAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGL 180

Query:   180 WLLSIVGNWCNFVTLFYI 197
             W++S+VGNW NF+TL YI
Sbjct:   181 WIISVVGNWFNFLTLVYI 198

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080167 "response to karrikin" evidence=IEP

GO:0006007 "glucose catabolic process" evidence=RCA

TAIR|locus:2082772 AT3G61560 [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
 Identities = 67/128 (52%), Positives = 84/128 (65%)

Query:     1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXX-XAFKSKVFRLFGREKPIH 59
             MAE   +    ++SL+EKI                        A K+K++RLFGREKP+H
Sbjct:     1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVH 60

Query:    60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
              VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL S
Sbjct:    61 KVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLS 120

Query:   120 NASTFINK 127
             NA  F+NK
Sbjct:   121 NAHAFMNK 128

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2089663 AT3G18260 "AT3G18260" [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
 Identities = 63/152 (41%), Positives = 91/152 (59%)

Query:    47 KVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCH 106
             K  +LF R++ IH + G GK ADI LWR  KI+A ++ G + +W L E++EY+ ITL+CH
Sbjct:    19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICH 78

Query:   107 ISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASG 166
              S+ S+   F+WS AS F+N   P IP V L E    + A +     N+ L  L ++A G
Sbjct:    79 ASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACG 138

Query:   167 RDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIG 198
             RD   F      L+++SI+G + NFV L +IG
Sbjct:   139 RDPPLFFLTTISLYIVSIIGTYFNFVNLLFIG 170

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2049077 AT2G15280 "AT2G15280" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 59/177 (33%), Positives = 100/177 (56%)

Query:    55 EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAV 114
             E+ +H  +  G  AD+ +W+N++    +LG  T +W LFE   Y     V +  +LS+ +
Sbjct:     2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61

Query:   115 LFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG 174
             LFLW+ ++   N+  P++P + + E+FV   A A+R  IN  LAV REI  GR+ K+   
Sbjct:    62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121

Query:   175 VIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVF 231
             V   LW +S VGN+ NF+T+ Y+G   SL++   + ++   + + L L +   +T +
Sbjct:   122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQY 178

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080315 AT3G54120 "AT3G54120" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 55/185 (29%), Positives = 105/185 (56%)

Query:    50 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI 109
             +LF R++ IH +LG G  AD+ LWR K +S G++    A W++FE   Y + TL+  + +
Sbjct:     7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66

Query:   110 LSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDL 169
             L L++LFLWS +++ +N+  P +P   + E    E +  LR  +N+ L V  +IA  RD 
Sbjct:    67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126

Query:   170 KKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFET 229
             + +  V   L+LLS++G+  +F TL +      + + A++ ++  +++  ++ +      
Sbjct:   127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTRE 186

Query:   230 VFVLL 234
             +++ L
Sbjct:   187 LYLRL 191

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090609 AT3G19460 "AT3G19460" [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 58/186 (31%), Positives = 102/186 (54%)

Query:    68 ADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINK 127
             AD+ LWRN+  +  +L  +T  W LFE   Y+L++ V ++ +L +A+ FLW+ ++T +N+
Sbjct:     7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66

Query:   128 SPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG-LWLLSIVG 186
               P +P + +PE+F  + A  LR  IN  L++  +I   R+  + L V    LW  +I  
Sbjct:    67 PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQ-TICC 125

Query:   187 NWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVF--VLLH-TVPVIYEK 243
              +  F+ + Y+    S V     +  +++ +  +  L  S   V+  VLL  + P++YEK
Sbjct:   126 IFL-FLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEK 184

Query:   244 YEDKID 249
             Y+D ID
Sbjct:   185 YQDHID 190

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2046783 RTNLB13 "AT2G23640" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
 Identities = 38/130 (29%), Positives = 70/130 (53%)

Query:    69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKS 128
             DI+LWR KK++   L  +T+ W+L     +  IT+V  I I  ++++FLW +    ++K 
Sbjct:    18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77

Query:   129 PPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNW 188
              PE+  + + E+FV+E   + R  +   +  +  + +  +   F   + G W+LS +GN 
Sbjct:    78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137

Query:   189 CNFVTLFYIG 198
              +F T  +IG
Sbjct:   138 LDFHTCLFIG 147

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SH59	RTNLC_ARATH	No assigned EC number	0.5923	0.8710	0.9803	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	287
pfam02453	164	pfam02453, Reticulon, Reticulon	9e-58

>gnl|CDD|217046 pfam02453, Reticulon, Reticulon

 Score =  182 bits (463), Expect = 9e-58
 Identities = 74/196 (37%), Positives = 103/196 (52%), Gaps = 33/196 (16%)

Query: 67  PADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFIN 126
            AD+ LWR+ K S  V G    +W+LF L  Y L++++ ++ +L LAV FLW  A   +N
Sbjct: 1   VADLLLWRDPKKSGVVFGSLLVIWLLFSLSGYSLLSVLSYLLLLLLAVTFLWRLAKKLLN 60

Query: 127 KSP-PEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIV 185
             P P  P VTL E+ V E A +LR  IN+AL  LR +  G DL   L    GLWLLS +
Sbjct: 61  AVPEPLDPDVTLSEETVEEIADSLRVLINKALKELRRLFLGEDLVDSLKAAVGLWLLSYL 120

Query: 186 GNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYE 245
           G+  + +TL YIG                                 +L  TVP++YEKY+
Sbjct: 121 GSLFSGLTLLYIG--------------------------------VILAFTVPLLYEKYQ 148

Query: 246 DKIDSFGEKATIEIKK 261
           D+ID++ EKA  ++KK
Sbjct: 149 DEIDAYVEKAKAKVKK 164

Reticulon, also know as neuroendocrine-specific protein (NSP), is a protein of unknown function which associates with the endoplasmic reticulum. This family represents the C-terminal domain of the three reticulon isoforms and their homologues. Length = 164

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	287
KOG1792	230	consensus Reticulon [Intracellular trafficking, se	100.0
PF02453	169	Reticulon: Reticulon; InterPro: IPR003388 Eukaryot	100.0
PF04842	683	DUF639: Plant protein of unknown function (DUF639)	95.59
PF08372	156	PRT_C: Plant phosphoribosyltransferase C-terminal;	91.24
COG1377	363	FlhB Flagellar biosynthesis pathway, component Flh	89.08
PF06398	359	Pex24p: Integral peroxisomal membrane peroxin; Int	88.83
PRK05702	359	flhB flagellar biosynthesis protein FlhB; Reviewed	86.48
COG4792	349	EscU Type III secretory pathway, component EscU [I	85.24
KOG1792	230	consensus Reticulon [Intracellular trafficking, se	85.16

>KOG1792 consensus Reticulon [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=6.2e-58  Score=416.77  Aligned_cols=221  Identities=59%  Similarity=0.968  Sum_probs=211.9

Q ss_pred             CCCCCCCCCCCcchhhhccccccCCCCcccccccCCCcccceeecccCchhHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 023137           29 SSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHIS  108 (287)
Q Consensus        29 s~~~~~~~~~~~~~~~~~~~~r~fgr~~~vh~vLGggkvaDlLlWRn~k~Sa~vfg~~t~~w~Lf~~~~ysliSlv~~il  108 (287)
                      |++|++++++++++ .+++++|+|+|++|+|+++|||+++|+++|||+|.||++|++++++|++|+..+|+.+|++|+++
T Consensus         6 s~~~~~~~~~~~~s-~~~~~~rlf~~~~~v~~~lg~~~vaDlllWrdkk~s~~vl~~~~~~w~lf~~~~~~~vt~~~~i~   84 (230)
T KOG1792|consen    6 SSSNSESEKLKFTS-AIEKSSRLFGREGPVHKVLGGGKVADLLLWRDKKKSGTVLGVATALWLLFEFFSYNSVTLLCHIL   84 (230)
T ss_pred             cccccccccccccc-ccchhccccCCCccccccCCCCchhheeeeeccccceeehHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            33488888877677 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhcc-CCC--CCC-ceeeCHHHHHHHHHHHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHH
Q 023137          109 ILSLAVLFLWSNASTFINK-SPP--EIP-VVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSI  184 (287)
Q Consensus       109 ll~l~vlFl~~~~~~~ink-~~~--~~P-~~~isee~v~~~a~~l~~~iN~~l~~lr~I~~g~d~~~flkv~~~LwvLs~  184 (287)
                      ++++++.|+|++...++|| ++|  ..| ++++|||.+++.+++++.++|+.+.++|++++|+|+++|++++++||++|+
T Consensus        85 ll~~~i~F~w~~~~~~~~k~~~~~~~lp~~i~ipee~~~~~a~~~~~~in~~l~~l~~ia~~~d~~~~lk~~v~lw~lS~  164 (230)
T KOG1792|consen   85 LLALAILFLWSKAVTFLNKKSEPGAYLPVEITIPEEFVLALASSLRVEINQALSELRDIALGRDLKDFLKVAVGLWILSY  164 (230)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCccccCCceeecCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence            9999999999999998888 666  688 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhHHHhhccchhhHHHHHHHHHHHHHHHhhhhccCcccceeeeeehhhHHHhhchhHHHHHHHHHHHHHHHHHH
Q 023137          185 VGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYA  264 (287)
Q Consensus       185 vGs~~s~~TLlyi~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~v~~fTvP~lYekyed~ID~~~~ka~~~ik~~y~  264 (287)
                      +|+|||++||+|+                                |++++||+|++||||||+||++++++.++++++|+
T Consensus       165 vGs~fn~lTll~i--------------------------------g~v~~~TvP~~YEky~d~ID~~~~~~~~~~k~~~~  212 (230)
T KOG1792|consen  165 VGSLFNFLTLLYI--------------------------------GLVLLFTVPVLYEKYEDQIDPYLGKVMEELKKHYR  212 (230)
T ss_pred             HHHhhhHHHHHHH--------------------------------HHHHHhcccchhHHhHHHHhHHHHHHHHHHHHHHH
Confidence            9999999999999                                99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCccCCC
Q 023137          265 VFDEKVLKKVLSRIPKGALKKK  286 (287)
Q Consensus       265 ~~d~kvl~kv~skiP~~~~k~k  286 (287)
                      ++|+|++    +|||+|+.+++
T Consensus       213 ~~~~k~l----~kip~~~~~~~  230 (230)
T KOG1792|consen  213 KFDEKVL----SKIPAGPRKKE  230 (230)
T ss_pred             HHHHHHh----hcCCCccccCC
Confidence            9999999    99999988753

>PF02453 Reticulon: Reticulon; InterPro: IPR003388 Eukaryotic proteins of the reticulon (RTN) family all share an association with the endoplasmic reticulum (ER)

Probab=100.00  E-value=1.2e-36  Score=256.34  Aligned_cols=163  Identities=39%  Similarity=0.627  Sum_probs=48.5

Q ss_pred             ccceeecccCchhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHhhhccCC------CCCCceeeCHH
Q 023137           67 PADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSP------PEIPVVTLPEK  140 (287)
Q Consensus        67 vaDlLlWRn~k~Sa~vfg~~t~~w~Lf~~~~ysliSlv~~illl~l~vlFl~~~~~~~ink~~------~~~P~~~isee  140 (287)
                      |+|+++||||+.||.+|++++++|+++.+.++|++|++|+++++.+++.+++....+++++.+      ++.++.++|||
T Consensus         1 V~dll~W~~~~~S~~v~~~~~~~~~l~~~~~~s~is~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (169)
T PF02453_consen    1 VADLLLWRDPKKSGIVFGAILLFWLLFWLFNYSLISLVSYILLLLLAISFLYRLLSKVLSRSPKGPFKEPLDYDLEISEE   80 (169)
T ss_dssp             ----------------------------------------------------THCCCTCCHHHHCTTHHHHCHHHHHCCH
T ss_pred             CceeeEecCCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccCCccccccccHH
Confidence            689999999999999999999999999999999999999999999999999988888777755      44457899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHhhhhhHHHhhccchhhHHHHHHHHHHHHHHHhh
Q 023137          141 FVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCL  220 (287)
Q Consensus       141 ~v~~~a~~l~~~iN~~l~~lr~I~~g~d~~~flkv~~~LwvLs~vGs~~s~~TLlyi~~~~~~~~~~~~~~~~~~~~~c~  220 (287)
                      .++++++.+++.+|..+..+|+++.++|++.|+++++++|+++.+|+++|++||+|+                       
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~l~~~~~l~~l~~lg~~~s~~~L~~l-----------------------  137 (169)
T PF02453_consen   81 RVERLADSVAEWINSVLSWLRRLVFGEDPKKSLKVFVVLYILSFLGSWFSFLTLLYL-----------------------  137 (169)
T ss_dssp             HHHHHHHHCCCCCCHHHHHHHCCCHCT-TTGGG-----------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHcCHHHHHHH-----------------------
Confidence            999999999999999999999999999999999999999999999999999999999                       


Q ss_pred             hhccCcccceeeeeehhhHHHhhchhHHHHHHHHHHHHHHH
Q 023137          221 DLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKK  261 (287)
Q Consensus       221 ~~~~~~~~~~~v~~fTvP~lYekyed~ID~~~~ka~~~ik~  261 (287)
                               +++++||+|.+||+||++||++++++++++||
T Consensus       138 ---------~~~~~f~~P~ly~~~~~~Id~~~~~~~~~~~k  169 (169)
T PF02453_consen  138 ---------GVLGAFTVPKLYEKYQEEIDQYVAKVKEKVKK  169 (169)
T ss_dssp             -----------------------------------------
T ss_pred             ---------HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence                     99999999999999999999999999888865

Whereas amino-terminal regions are not related to one another, all reticulon proteins share a 200 amino acid residue region of sequence similarity at the C-terminal. This region contains two large hydrophobic regions separated by a 66 residue hydrophilic segment. The conserved hydrophobic C-terminal portion has been shown to play an essential role in the association of reticulons with the ER membrane. The hydrophobic portions are supposed to be membrane-embedded and the hydrophilic 66 residue localized to the lumenal/extracellular face of the membrane. Most reticulons have a di-lysine ER retention motif at the C-terminal. Because of their likely association with the rough as well as the smooth ER, the reticulons might play some role in transport processes or in regulation of intracellular calcium levels. It has been suggested that the reticulons may be serving as ER-associated channel-like complexes [, , , ].; GO: 0005783 endoplasmic reticulum; PDB: 2KO2_A 2JV5_A 2G31_A.

>PF04842 DUF639: Plant protein of unknown function (DUF639); InterPro: IPR006927 The sequences in this family are plant proteins of unknown function

Probab=95.59  E-value=0.11  Score=54.90  Aligned_cols=125  Identities=17%  Similarity=0.094  Sum_probs=76.8

Q ss_pred             cccceeecccCchhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc--------CCCCCC--ce
Q 023137           66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINK--------SPPEIP--VV  135 (287)
Q Consensus        66 kvaDlLlWRn~k~Sa~vfg~~t~~w~Lf~~~~ysliSlv~~illl~l~vlFl~~~~~~~ink--------~~~~~P--~~  135 (287)
                      ...++..|+||.+|..+++.++.+.+- .|.+|-+-     ..++.+++..+|.....-.+|        .||+.-  +-
T Consensus       505 ~~~~l~~We~P~kt~~Fl~~~~~iI~r-~wl~Y~~p-----~~Ll~~a~~Ml~~r~~~~~g~~~~~v~V~~pP~~nTvEq  578 (683)
T PF04842_consen  505 WLQKLASWEEPLKTLVFLALFLYIIYR-GWLGYIFP-----AFLLFSAVFMLWLRYQGRLGKSFGEVTVRDPPPKNTVEQ  578 (683)
T ss_pred             HHHHHhhccCcchhHHHHHHHHHHHHH-HHHHHHHH-----HHHHHHHHHHHHHHhhhccCCccceEEecCCCCccHHHH
Confidence            344788999999999998877763322 34444322     223333444456333211122        122111  11


Q ss_pred             eeCHHHHHHHHHHHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHhhhhhHHHh
Q 023137          136 TLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFY  196 (287)
Q Consensus       136 ~isee~v~~~a~~l~~~iN~~l~~lr~I~~g~d~~~flkv~~~LwvLs~vGs~~s~~TLly  196 (287)
                      .+.-+....-++......|-++-++|.|.+...++.+-+|++.|.+++.+-.++-+--++.
T Consensus       579 ilalQ~Ais~~E~~iQ~~NI~LLKiRsllls~~PqaT~~Va~~Ll~~A~~LavvP~kyil~  639 (683)
T PF04842_consen  579 ILALQEAISQLEEYIQAANIVLLKIRSLLLSKFPQATNKVALALLGLAAVLAVVPFKYILL  639 (683)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1222233334556677889999999999999999999999999999888876655443333

>PF08372 PRT_C: Plant phosphoribosyltransferase C-terminal; InterPro: IPR013583 This domain is found at the C terminus of phosphoribosyltransferases and phosphoribosyltransferase-like proteins

Probab=91.24  E-value=0.055  Score=47.65  Aligned_cols=50  Identities=18%  Similarity=0.279  Sum_probs=36.4

Q ss_pred             cchhhhccccccCCCCcccccccC-----CCcccceeecccCchhHHHHHHHHHH
Q 023137           40 SIDAFKSKVFRLFGREKPIHHVLG-----AGKPADIFLWRNKKISAGVLGGATAM   89 (287)
Q Consensus        40 ~~~~~~~~~~r~fgr~~~vh~vLG-----ggkvaDlLlWRn~k~Sa~vfg~~t~~   89 (287)
                      ++++++.+..|+-.--.-+-.++|     |.++..++.||||..|+....+.+++
T Consensus        53 ~~~~lr~Rydrlr~va~rvQ~vlgd~At~gERl~allsWrdP~aT~lf~~~clv~  107 (156)
T PF08372_consen   53 PPDSLRMRYDRLRSVAGRVQNVLGDVATQGERLQALLSWRDPRATALFVVFCLVA  107 (156)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHH
Confidence            345677776666443334666776     67899999999999999988776653

It contains putative transmembrane regions. It often appears together with calcium-ion dependent C2 domains (IPR000008 from INTERPRO).

>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]

Probab=89.08  E-value=9.2  Score=38.10  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=23.1

Q ss_pred             HHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHH
Q 023137          152 EINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGN  187 (287)
Q Consensus       152 ~iN~~l~~lr~I~~g~d~~~flkv~~~LwvLs~vGs  187 (287)
                      .+|- ++-++++++.+.+..++|.++=.-++++++-
T Consensus       127 kinP-~~G~KRiFs~~~~vEllKsllKi~~v~~v~~  161 (363)
T COG1377         127 KLNP-IKGLKRIFSLQTLVELLKSLLKIVLVGLVAY  161 (363)
T ss_pred             ccCh-hHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4554 6667778888888888776665555555543

>PF06398 Pex24p: Integral peroxisomal membrane peroxin; InterPro: IPR010482 Peroxisomes play diverse roles in the cell, compartmentalising many activities related to lipid metabolism and functioning in the decomposition of toxic hydrogen peroxide

Probab=88.83  E-value=7.5  Score=37.33  Aligned_cols=23  Identities=22%  Similarity=0.221  Sum_probs=17.5

Q ss_pred             cccceeecccCchhHHHHHHHHH
Q 023137           66 KPADIFLWRNKKISAGVLGGATA   88 (287)
Q Consensus        66 kvaDlLlWRn~k~Sa~vfg~~t~   88 (287)
                      .+.++++|+|+-.+-.++...+.
T Consensus        31 ~vl~il~W~~p~~t~~~L~l~t~   53 (359)
T PF06398_consen   31 RVLRILTWTNPDYTLSFLLLYTF   53 (359)
T ss_pred             HHHHeEEeCCCCcchHHHHHHHH
Confidence            35679999999988777665554

Sequence similarity was identified between two hypothetical proteins and the peroxin integral membrane protein Pex24p [].

>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed

Probab=86.48  E-value=23  Score=34.94  Aligned_cols=25  Identities=24%  Similarity=0.372  Sum_probs=17.4

Q ss_pred             HHHHHHHHHhhhhcccChHHHHHHHH
Q 023137          152 EINRALAVLREIASGRDLKKFLGVIA  177 (287)
Q Consensus       152 ~iN~~l~~lr~I~~g~d~~~flkv~~  177 (287)
                      .+|- ++-++++++.+.+..++|-++
T Consensus       127 rlNP-i~G~KriFS~~~l~el~Ksll  151 (359)
T PRK05702        127 KLNP-LKGLKRMFSAQGLVELLKSLL  151 (359)
T ss_pred             hcCH-HHHHHHhcCHHHHHHHHHHHH
Confidence            4554 667888888888777666444

>COG4792 EscU Type III secretory pathway, component EscU [Intracellular trafficking and secretion]

Probab=85.24  E-value=6.1  Score=38.80  Aligned_cols=98  Identities=16%  Similarity=0.229  Sum_probs=60.8

Q ss_pred             HHHHhhhhcccChHH----HHHHHHHHHHH--HHHHHhhhhhHHHhhccchhhHHHHHHHHHHHHHHHhhhhccCcccce
Q 023137          157 LAVLREIASGRDLKK----FLGVIAGLWLL--SIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETV  230 (287)
Q Consensus       157 l~~lr~I~~g~d~~~----flkv~~~LwvL--s~vGs~~s~~TLlyi~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~  230 (287)
                      ++.+++|++.+....    .+||++...+.  -..|.|-+|..|=+.|--|....-+.+.+|++-+.  +-        |
T Consensus       125 ~~~~K~ifS~rS~vEl~KS~lKV~vLslif~f~l~~~~~t~~~lp~CG~~C~~~Vv~~~~~~L~~g~--~~--------~  194 (349)
T COG4792         125 VQNAKRIFSLRSVVELLKSLLKVVVLSLIFWFMLHGYANTFLYLPGCGLYCALPVVSFLLRLLWVGV--AV--------G  194 (349)
T ss_pred             hhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHH--HH--------H
Confidence            344556666555444    44555543333  34566667777777799999999999999998842  11        2


Q ss_pred             eeeeehhhHHHhhchhHHHHHHHHHHHHHHHHHHHH
Q 023137          231 FVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVF  266 (287)
Q Consensus       231 ~v~~fTvP~lYekyed~ID~~~~ka~~~ik~~y~~~  266 (287)
                      ++..-.+-..+|+||  +=..+..-..++|.-|...
T Consensus       195 ylv~sv~Dy~fqr~~--~~K~lkMSKdEVkRE~Kd~  228 (349)
T COG4792         195 YLVFSVADYAFQRYQ--ILKELKMSKDEVKREYKDM  228 (349)
T ss_pred             HHHHHHHHHHHHHHH--HHHHhccCHHHHHHHHhcc
Confidence            333334556778887  4445555666676666544

>KOG1792 consensus Reticulon [Intracellular trafficking, secretion, and vesicular transport]

Probab=85.16  E-value=1.2  Score=41.38  Aligned_cols=98  Identities=15%  Similarity=0.144  Sum_probs=62.3

Q ss_pred             HHhhhhcccChHHHHHHHHHHHHHHHHHHhhhhhHHHhhccchhhHHHHHHHHHHHHHHHhhhhccCcccceeee----e
Q 023137          159 VLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVL----L  234 (287)
Q Consensus       159 ~lr~I~~g~d~~~flkv~~~LwvLs~vGs~~s~~TLlyi~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~v~----~  234 (287)
                      ...|+.++||.+.+..+..+..++-.+-.+++..++..+- --++...+-+-.|.            -+.+...=    .
T Consensus        42 ~vaDlllWrdkk~s~~vl~~~~~~w~lf~~~~~~~vt~~~-~i~ll~~~i~F~w~------------~~~~~~~k~~~~~  108 (230)
T KOG1792|consen   42 KVADLLLWRDKKKSGTVLGVATALWLLFEFFSYNSVTLLC-HILLLALAILFLWS------------KAVTFLNKKSEPG  108 (230)
T ss_pred             chhheeeeeccccceeehHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHH------------HHHHHHhcCCCcc
Confidence            4678999999999998877666666666665555554440 00111122222222            22111110    1


Q ss_pred             ehhhHHHhhchhHHHHHHHHHHHHHHHHHHHHHHH
Q 023137          235 HTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEK  269 (287)
Q Consensus       235 fTvP~lYekyed~ID~~~~ka~~~ik~~y~~~d~k  269 (287)
                      +.+|.-++-.|++++++...+..+++...+++.+=
T Consensus       109 ~~lp~~i~ipee~~~~~a~~~~~~in~~l~~l~~i  143 (230)
T KOG1792|consen  109 AYLPVEITIPEEFVLALASSLRVEINQALSELRDI  143 (230)
T ss_pred             ccCCceeecCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47888888899999999999999999888777663

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	287
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 7e-05
 Identities = 47/331 (14%), Positives = 95/331 (28%), Gaps = 97/331 (29%)

Query: 9   ESSDKSLVEKI----TDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKP-----IH 59
           E    S++ ++     D+++  +   +  +  +       +  +  L    +P     I 
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL----RPAKNVLID 156

Query: 60  HVLGAGKP---ADIFLWRNKKISAGVLGGATAMWVLF-------ELLEYHLITLVCHISI 109
            VLG+GK     D+    + K+   +       W+          +LE  L  L  +   
Sbjct: 157 GVLGSGKTWVALDVC--LSYKVQCKMDFKI--FWLNLKNCNSPETVLE-MLQKL-LYQID 210

Query: 110 LSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVL-EFASALRYEINRALAVLREIASGRD 168
            +              +     I +     +  L     +  YE    L VL  + + + 
Sbjct: 211 PNWTSR----------SDHSSNIKLRIHSIQAELRRLLKSKPYE--NCLLVLLNVQNAKA 258

Query: 169 LKKF------------LGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVL-----MAYFLK 211
              F              V        +       ++L      HS+ L      +  LK
Sbjct: 259 WNAFNLSCKILLTTRFKQVTD-----FLSAATTTHISL----DHHSMTLTPDEVKSLLLK 309

Query: 212 WIVFLLKCLDLLYGSFETVFVLLHTVPVI------------------YEKYEDKIDSFGE 253
           ++    +  DL     E +      + +I                   +K    I+S   
Sbjct: 310 YL--DCRPQDL---PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364

Query: 254 K-ATIEIKKQY---AVF--DEKVLKKVLSRI 278
                E +K +   +VF     +   +LS I
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLI 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	287
2ko2_A	79	Reticulon-4; NOGO, membrane protein, peripheral, D	98.07
2g31_A	60	Reticulon-4; NOGO, helix, signaling protein; NMR {	97.26

>2ko2_A Reticulon-4; NOGO, membrane protein, peripheral, DPC micelle, myelin INHI endoplasmic reticulum, membrane, phosphoprotein, transmembr; NMR {Mus musculus}

Probab=98.07  E-value=5.2e-07  Score=69.88  Aligned_cols=58  Identities=22%  Similarity=0.303  Sum_probs=54.6

Q ss_pred             HHHHHHhhhccCCCCCC-------ceeeCHHHHHHHHHHHHHHHHHHHHHHhhhhcccChHHHHH
Q 023137          117 LWSNASTFINKSPPEIP-------VVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG  174 (287)
Q Consensus       117 l~~~~~~~ink~~~~~P-------~~~isee~v~~~a~~l~~~iN~~l~~lr~I~~g~d~~~flk  174 (287)
                      +|..+.+.++|++.++|       ++.+|+|.++++++.+...+|.++..+|++++++|+..|+|
T Consensus        15 iYk~vlqavqKtd~~hPFk~YLd~Di~ls~E~~~~~~~~~v~~in~~l~~LRrLfLVedlvDSLK   79 (79)
T 2ko2_A           15 IYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLK   79 (79)
T ss_dssp             HHHHTHHHHHCTTTTCCSHHHHHHHHHHTTCHHHHHHHCTTTHHHHHHHHHHHHHHHTCTTGGGC
T ss_pred             HHHHHHHHHHhCCCCCCccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhHHhhcccHHHhcC
Confidence            68888899999999999       88999999999999999999999999999999999998875

>2g31_A Reticulon-4; NOGO, helix, signaling protein; NMR {Homo sapiens} PDB: 2jv5_A

Probab=97.26  E-value=5.3e-06  Score=60.99  Aligned_cols=50  Identities=22%  Similarity=0.273  Sum_probs=44.2

Q ss_pred             HHHHhhhccCCCCCC-------ceeeCHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 023137          119 SNASTFINKSPPEIP-------VVTLPEKFVLEFASALRYEINRALAVLREIASGRD  168 (287)
Q Consensus       119 ~~~~~~ink~~~~~P-------~~~isee~v~~~a~~l~~~iN~~l~~lr~I~~g~d  168 (287)
                      ..+.+.++|++.++|       ++.+|+|.++++++.+...+|.++..+|++++++|
T Consensus         4 k~vlqavqKt~~~hPFk~yLd~di~ls~e~~~~~~~~~v~~in~~l~~lrrLfLVed   60 (60)
T 2g31_A            4 KGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDD   60 (60)
T ss_dssp             CTTTTHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHGGGTCHHHHHHHHTSSCTTC
T ss_pred             HHHHHHHHhCCCCCCchhccccCcCCCHHHHHHHHHHHHHHHHHHHHHHhHhhccCC
Confidence            344566778887788       88999999999999999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00