Citrus Sinensis ID: 023529

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-

MKRYRNGEIWDFETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSFMNAR

cccccccccccccccccccccEEEEEEEcccccHHHHHcccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEcEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHccccHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccccHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHccc

ccccccccEEEEcccccccccEEEEEEccccccEEEEEEEcccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccHccccccHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHccc

mkryrngeiwdfetaeesggrevilgldggttstvcicmpvismsdslpdplpVLARAAagcsnhnsvgedAARETIEKVMADALlksgsnrsAVRAVCLAvsgvnhptdQQRILNWLSGYGIAAQALTAVIRAydgrgpdtmlTSNILstlelsspdeligwtyvdpswarIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSlsgedgkhsfplVMVGGvleanrrwDIGREVVKCILRdypgavpirpkvepAVGAALLAWNSFMNAR

mkryrngeiwdfetaeesggreVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADAllksgsnrSAVRAVCLAVSGVNHPTDQQRILNWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSlsgedgkhsfplVMVGGVLEANRRWDIGREVVKCILRDYPgavpirpkvePAVGAALLAWNSFMNAR

********IWDFETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAA********************MADALL*****RSAVRAVCLAVSGVNHPTDQQRILNWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSF****

**********************VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSFM***

***YRNGEIWDFETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSFMN**

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		281	2.2.26 [Sep-21-2011]
Q54PM7		319	N-acetyl-D-glucosamine ki	yes	no	0.551	0.485	0.378	1e-21

>sp\|Q54PM7\|NAGK_DICDI N-acetyl-D-glucosamine kinase OS=Dictyostelium discoideum GN=nagk PE=3 SV=2	Back alignment and function desciption

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 9/164 (5%)

Query: 116 NWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP---SWAR 172
           ++ SGY I    L  V++A D  GP T LT  +L  L+L+  ++LI W Y DP   SW +
Sbjct: 160 DYGSGYQIGYDILRHVLKAKDQVGPKTSLTQVLLEKLQLTKEEDLISWAY-DPKTQSWQK 218

Query: 173 IAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGV 232
            A L P+    A+ GDE++N IL D+   L   + +V+++L L   D +  FPLV  GG 
Sbjct: 219 FAQLSPLAFEQAQLGDEISNLILVDAANALYDLINSVIKKLGL---DKEEKFPLVYTGGN 275

Query: 233 LEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 276
           +E  R+  +   + K I+ +YP A  +    +P++GAALLA NS
Sbjct: 276 IE--RKGILSDLLSKKIMENYPNAEILNTTCDPSMGAALLALNS 317

Converts N-acetylglucosamine (GlcNAc), a major component of complex carbohydrates, into GlcNAc 6-phosphate. Also has ManNAc kinase activity.
Dictyostelium discoideum (taxid: 44689)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 5EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		281
326518726		283	predicted protein [Hordeum vulgare subsp	0.971	0.964	0.653	1e-95
18397556		351	Actin-like ATPase superfamily protein [A	0.935	0.749	0.506	3e-73
6634777		352	F26G16.16 [Arabidopsis thaliana]	0.935	0.747	0.504	5e-73
359485331		350	PREDICTED: N-acetyl-D-glucosamine kinase	0.572	0.46	0.823	1e-71
224131396		354	predicted protein [Populus trichocarpa]	0.580	0.460	0.817	6e-71
225444057		358	PREDICTED: N-acetyl-D-glucosamine kinase	0.548	0.430	0.8	8e-68
255561146		328	N-acetylglucosamine kinase, putative [Ri	0.523	0.448	0.871	2e-67
356501411		370	PREDICTED: N-acetyl-D-glucosamine kinase	0.583	0.443	0.781	4e-67
224122134		362	predicted protein [Populus trichocarpa]	0.580	0.450	0.779	5e-67
224061623		362	predicted protein [Populus trichocarpa]	0.580	0.450	0.779	3e-66

>gi\|326518726\|dbj\|BAJ92524.1\| predicted protein [Hordeum vulgare subsp. vulgare]	Back alignment and taxonomy information

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 181/277 (65%), Positives = 216/277 (77%), Gaps = 4/277 (1%)

Query: 1   MKRYRNGEIWDFETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAA 60
           M  Y NG+      A   GG  VILG+DGGTTSTVC+C+P        P  + VL+RA A
Sbjct: 1   MGGYENGD--SSAAAAREGG--VILGVDGGTTSTVCVCLPAAMPPPEAPGSVAVLSRAIA 56

Query: 61  GCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLSG 120
           GCSN NSVGE+AA ET+E+VM  AL  + ++RSAV AVCL+VSGVNHP+DQQR+L+W+ G
Sbjct: 57  GCSNRNSVGENAALETLEQVMMQALTMASTDRSAVVAVCLSVSGVNHPSDQQRMLDWICG 116

Query: 121 YGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVV 180
           YGIAAQALTAVI+A+DGRGP T LT  I+  LE+SSPDELIGW Y DPSWARIAALVPVV
Sbjct: 117 YGIAAQALTAVIKAHDGRGPQTNLTREIIRKLEISSPDELIGWAYADPSWARIAALVPVV 176

Query: 181 VSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWD 240
           VS AE GD+VAN IL D+V+ELA SV AVV+RL+L GEDGK  FPLV+VGGVLE N++WD
Sbjct: 177 VSAAEDGDKVANTILHDAVQELAESVVAVVRRLTLCGEDGKDQFPLVLVGGVLEGNKKWD 236

Query: 241 IGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSF 277
           I  EV+KCI + +PG  PIRP+VEPA+GAALLAW+  
Sbjct: 237 ISGEVIKCISKVFPGVCPIRPEVEPAIGAALLAWSHL 273

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|18397556\|ref\|NP_564358.1\| Actin-like ATPase superfamily protein [Arabidopsis thaliana] gi\|21536578\|gb\|AAM60910.1\| unknown [Arabidopsis thaliana] gi\|30102644\|gb\|AAP21240.1\| At1g30540 [Arabidopsis thaliana] gi\|110735965\|dbj\|BAE99957.1\| hypothetical protein [Arabidopsis thaliana] gi\|332193120\|gb\|AEE31241.1\| Actin-like ATPase superfamily protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|6634777\|gb\|AAF19757.1\|AC009917_16 F26G16.16 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|359485331\|ref\|XP_002278295.2\| PREDICTED: N-acetyl-D-glucosamine kinase-like [Vitis vinifera] gi\|302143498\|emb\|CBI22059.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224131396\|ref\|XP_002321074.1\| predicted protein [Populus trichocarpa] gi\|222861847\|gb\|EEE99389.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225444057\|ref\|XP_002263483.1\| PREDICTED: N-acetyl-D-glucosamine kinase [Vitis vinifera] gi\|297740841\|emb\|CBI31023.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255561146\|ref\|XP_002521585.1\| N-acetylglucosamine kinase, putative [Ricinus communis] gi\|223539263\|gb\|EEF40856.1\| N-acetylglucosamine kinase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356501411\|ref\|XP_003519518.1\| PREDICTED: N-acetyl-D-glucosamine kinase-like [Glycine max]	Back alignment and taxonomy information

>gi\|224122134\|ref\|XP_002330549.1\| predicted protein [Populus trichocarpa] gi\|222872107\|gb\|EEF09238.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224061623\|ref\|XP_002300572.1\| predicted protein [Populus trichocarpa] gi\|222847830\|gb\|EEE85377.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		281
TAIR\|locus:2028135		351	AT1G30540 [Arabidopsis thalian	0.583	0.467	0.757	1.4e-95
DICTYBASE\|DDB_G0284433		319	DDB_G0284433 "N-acetyl-D-gluco	0.540	0.476	0.385	5.5e-32

TAIR\|locus:2028135 AT1G30540 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 618 (222.6 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
 Identities = 125/165 (75%), Positives = 141/165 (85%)

Query:   116 NWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAA 175
             +W SGYGIAAQALTAVIRA+DGRGP TMLTS IL  L LSSPDELIGWTY DPSWARIAA
Sbjct:   188 DWGSGYGIAAQALTAVIRAHDGRGPQTMLTSTILKALGLSSPDELIGWTYADPSWARIAA 247

Query:   176 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEA 235
             LVP VVSCAEAGDE+++KIL D+ E+LALSVKAVVQRL L G+DG  SFP+VMVGGVL A
Sbjct:   248 LVPQVVSCAEAGDEISDKILVDAAEDLALSVKAVVQRLGLCGKDGTASFPVVMVGGVLNA 307

Query:   236 NRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSFMNA 280
             N++WDIG+EV K I R +PGA  I PKVEPAVGAALLA N F+++
Sbjct:   308 NQKWDIGKEVSKRINRYFPGAQTIIPKVEPAVGAALLAMN-FLSS 351

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016887 "ATPase activity" evidence=ISS

DICTYBASE\|DDB_G0284433 DDB_G0284433 "N-acetyl-D-glucosamine kinase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT1G30540	ATPase, BadF/BadG/BcrA/BcrD-type family; ATPase, BadF/BadG/BcrA/BcrD-type family; FUNCTIONS IN- ATPase activity; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- ATPase, BadF/BadG/BcrA/BcrD type (InterPro-IPR002731); Has 975 Blast hits to 975 proteins in 386 species- Archae - 31; Bacteria - 696; Metazoa - 107; Fungi - 20; Plants - 23; Viruses - 0; Other Eukaryotes - 98 (source- NCBI BLink). (351 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	NHO1	NHO1 (nonhost resistance to P. s. phaseolicola 1); carbohydrate kinase/ glycerol kinase; Encode [...] (522 aa)	•	0.413

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		281
pfam01869		257	pfam01869, BcrAD_BadFG, BadF/BadG/BcrA/BcrD ATPase	3e-20
COG2971		301	COG2971, COG2971, Predicted N-acetylglucosamine ki	1e-16

>gnl\|CDD\|216750 pfam01869, BcrAD_BadFG, BadF/BadG/BcrA/BcrD ATPase family	Back alignment and domain information

 Score = 86.7 bits (215), Expect = 3e-20
 Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 10/121 (8%)

Query: 117 WLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP-SWARIAA 175
             S   IAA+AL AV+R  DG    T L   ++  L     D+LI   Y      +  A 
Sbjct: 141 EGSFLWIAARALGAVLRELDGLAAKTTLADVVMKALG---VDDLIAVAYRKGAINSDCAV 197

Query: 176 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEA 235
               VV  A +GD  A  IL  + E LAL V A+++RL            +V+ GGV + 
Sbjct: 198 FAEQVVEHALSGDPKAEDILAGAAESLALRVAALLKRLGPVP------DQVVLTGGVAKN 251

Query: 236 N 236
            
Sbjct: 252 E 252

This family includes the BadF and BadG proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase. An uncharacterized protein from Aquifex aeolicus contains two copies of this region suggesting that the family may structurally dimerise. This family appears to be related to pfam00370. Length = 257

>gnl\|CDD\|225518 COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		281
COG2971		301	Predicted N-acetylglucosamine kinase [Carbohydrate	99.97
KOG1794		336	consensus N-Acetylglucosamine kinase [Carbohydrate	99.97
PF01869		271	BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In	99.93
TIGR00744		318	ROK_glcA_fam ROK family protein (putative glucokin	99.88
PRK13310		303	N-acetyl-D-glucosamine kinase; Provisional	99.85
COG1940		314	NagC Transcriptional regulator/sugar kinase [Trans	99.84
PRK09557		301	fructokinase; Reviewed	99.82
PRK09698		302	D-allose kinase; Provisional	99.82
PRK05082		291	N-acetylmannosamine kinase; Provisional	99.81
PRK00292		316	glk glucokinase; Provisional	99.73
PRK14101		638	bifunctional glucokinase/RpiR family transcription	99.67
PRK12408		336	glucokinase; Provisional	99.65
PRK13311		256	N-acetyl-D-glucosamine kinase; Provisional	99.53
TIGR00749		316	glk glucokinase, proteobacterial type. This model	99.41
TIGR02707		351	butyr_kinase butyrate kinase. This model represent	99.31
TIGR03192		293	benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s	99.18
TIGR00241		248	CoA_E_activ CoA-substrate-specific enzyme activase	99.14
PTZ00288		405	glucokinase 1; Provisional	99.14
PRK03011		358	butyrate kinase; Provisional	99.08
PRK00976		326	hypothetical protein; Provisional	99.01
PF02685		316	Glucokinase: Glucokinase; InterPro: IPR003836 Gluc	98.89
TIGR02261		262	benz_CoA_red_D benzoyl-CoA reductase, bcr type, su	98.89
TIGR03286		404	methan_mark_15 putative methanogenesis marker prot	98.87
COG1924		396	Activator of 2-hydroxyglutaryl-CoA dehydratase (HS	98.82
TIGR02259		432	benz_CoA_red_A benzoyl-CoA reductase, bcr type, su	98.78
PLN02914		490	hexokinase	98.51
PRK00047		498	glpK glycerol kinase; Provisional	98.39
COG0837		320	Glk Glucokinase [Carbohydrate transport and metabo	98.35
PF00370		245	FGGY_N: FGGY family of carbohydrate kinases, N-ter	98.32
PTZ00107		464	hexokinase; Provisional	98.31
PRK10939		520	autoinducer-2 (AI-2) kinase; Provisional	98.24
TIGR01311		493	glycerol_kin glycerol kinase. This model describes	98.22
smart00732		99	YqgFc Likely ribonuclease with RNase H fold. YqgF	98.19
PRK04123		548	ribulokinase; Provisional	98.19
PLN02405		497	hexokinase	98.19
COG1070		502	XylB Sugar (pentulose and hexulose) kinases [Carbo	98.16
PLN02362		509	hexokinase	98.15
PLN02596		490	hexokinase-like	98.15
TIGR01315		541	5C_CHO_kinase FGGY-family pentulose kinase. This m	98.12
PF00480		179	ROK: ROK family; InterPro: IPR000600 A family of b	98.09
PTZ00294		504	glycerol kinase-like protein; Provisional	98.06
COG1069		544	AraB Ribulose kinase [Energy production and conver	98.01
TIGR01234		536	L-ribulokinase L-ribulokinase. This enzyme catalyz	98.0
TIGR01314		505	gntK_FGGY gluconate kinase, FGGY type. Gluconate i	98.0
TIGR01312		481	XylB D-xylulose kinase. D-xylulose kinase (XylB) g	97.99
PLN02295		512	glycerol kinase	97.96
PRK13317		277	pantothenate kinase; Provisional	97.87
PRK10331		470	L-fuculokinase; Provisional	97.83
COG0554		499	GlpK Glycerol kinase [Energy production and conver	97.83
TIGR02628		465	fuculo_kin_coli L-fuculokinase. Members of this fa	97.77
PRK15027		484	xylulokinase; Provisional	97.75
PRK15080		267	ethanolamine utilization protein EutJ; Provisional	97.74
COG3426		358	Butyrate kinase [Energy production and conversion]	97.62
PF05378		176	Hydant_A_N: Hydantoinase/oxoprolinase N-terminal r	97.56
PF00871		388	Acetate_kinase: Acetokinase family; InterPro: IPR0	97.41
PRK13318		258	pantothenate kinase; Reviewed	97.4
PLN02669		556	xylulokinase	97.23
PRK13321		256	pantothenate kinase; Reviewed	97.23
TIGR00555		279	panK_eukar pantothenate kinase, eukaryotic/staphyl	96.93
TIGR02529		239	EutJ ethanolamine utilization protein EutJ family	96.86
COG5026		466	Hexokinase [Carbohydrate transport and metabolism]	96.79
KOG2517		516	consensus Ribulose kinase and related carbohydrate	96.65
PRK09605		535	bifunctional UGMP family protein/serine/threonine	96.37
PF03727		243	Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexo	96.33
PF00349		206	Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexo	96.29
PF14574		412	DUF4445: Domain of unknown function (DUF4445); PDB	95.93
PTZ00340		345	O-sialoglycoprotein endopeptidase-like protein; Pr	95.92
COG4020		332	Uncharacterized protein conserved in archaea [Func	95.62
PRK12440		397	acetate kinase; Reviewed	95.59
TIGR00329		305	gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami	95.59
PLN02666		1275	5-oxoprolinase	95.51
smart00842		187	FtsA Cell division protein FtsA. FtsA is essential	95.47
PRK14878		323	UGMP family protein; Provisional	95.42
PRK00180		402	acetate kinase A/propionate kinase 2; Reviewed	95.3
TIGR00016		404	ackA acetate kinase. Acetate kinase is involved in	95.18
PRK09604		332	UGMP family protein; Validated	95.17
PRK12379		396	propionate/acetate kinase; Provisional	94.71
PRK07157		400	acetate kinase; Provisional	94.38
PRK12397		404	propionate kinase; Reviewed	94.36
COG0145		674	HyuA N-methylhydantoinase A/acetone carboxylase, b	94.31
TIGR02627		454	rhamnulo_kin rhamnulokinase. This model describes	94.03
PRK09472		420	ftsA cell division protein FtsA; Reviewed	93.77
PRK07058		396	acetate kinase; Provisional	93.5
TIGR01174		371	ftsA cell division protein FtsA. This bacterial ce	93.43
COG0282		396	ackA Acetate kinase [Energy production and convers	93.36
KOG2707		405	consensus Predicted metalloprotease with chaperone	93.26
KOG1369		474	consensus Hexokinase [Carbohydrate transport and m	92.42
COG0533		342	QRI7 Metal-dependent proteases with possible chape	91.9
PF13941		457	MutL: MutL protein	91.3
PF02782		198	FGGY_C: FGGY family of carbohydrate kinases, C-ter	91.16
PF07318		343	DUF1464: Protein of unknown function (DUF1464); In	90.82
COG0849		418	ftsA Cell division ATPase FtsA [Cell division and	89.85
TIGR03281		326	methan_mark_12 putative methanogenesis marker prot	89.64
TIGR03725		202	bact_YeaZ universal bacterial protein YeaZ. This f	89.54
TIGR00143		711	hypF [NiFe] hydrogenase maturation protein HypF. A	86.84
PRK13324		258	pantothenate kinase; Reviewed	86.79
PF14450		120	FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B	86.0
TIGR01175		348	pilM type IV pilus assembly protein PilM. This pro	85.47
TIGR03123		318	one_C_unchar_1 probable H4MPT-linked C1 transfer p	84.98
PRK13320		244	pantothenate kinase; Reviewed	84.77
TIGR03723		314	bact_gcp putative glycoprotease GCP. This model re	83.66
TIGR03722		322	arch_KAE1 universal archaeal protein Kae1. This fa	82.96
COG3894		614	Uncharacterized metal-binding protein [General fun	82.5
PRK13331		251	pantothenate kinase; Reviewed	82.38
PRK13326		262	pantothenate kinase; Reviewed	82.15
TIGR03723		314	bact_gcp putative glycoprotease GCP. This model re	81.41
TIGR00671		243	baf pantothenate kinase, type III. This model desc	80.46

>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	Back alignment and domain information

Probab=99.97  E-value=9.5e-29  Score=219.33  Aligned_cols=233  Identities=28%  Similarity=0.397  Sum_probs=197.1

Q ss_pred             CCCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccccee
Q 023529           19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV   98 (281)
Q Consensus        19 ~~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~I   98 (281)
                      .++.|+||||+|||+|++++.|.         +|+++.+.+.++.|....+.+.++.+|.++|.+++.++|.++++|-.+
T Consensus         2 ~~~~~~lGVDGGGTkt~a~l~~~---------~g~vlg~g~sGpAN~~~~~~e~A~~ni~~ai~~A~~~aG~~~~~i~~~   72 (301)
T COG2971           2 EPMPYFLGVDGGGTKTRAVLADE---------DGNVLGRGKSGPANIQLVGKEEAVRNIKDAIREALDEAGLKPDEIAAI   72 (301)
T ss_pred             CCccEEEEEccCCcceEEEEEcC---------CCcEEEEeccCCceecccchHHHHHHHHHHHHHHHHhcCCCHHHhCce
Confidence            35789999999999999999996         999999999999998766669999999999999999999999998887


Q ss_pred             EEcccCCCChh--hHHHHHHhh----------------------------------------------------------
Q 023529           99 CLAVSGVNHPT--DQQRILNWL----------------------------------------------------------  118 (281)
Q Consensus        99 gig~~G~~~~~--~~~~l~~~~----------------------------------------------------------  118 (281)
                      +.|+++.+...  ....+...+                                                          
T Consensus        73 ~agla~ag~~~~~~~~~~~~~l~~a~~v~v~~Dg~iAl~ga~~~~~Gii~i~GTGSi~~~~~gg~~~r~GG~Gf~IgDeg  152 (301)
T COG2971          73 VAGLALAGANVEEAREELERLLPFAGKVDVENDGLIALRGALGDDDGIIVIAGTGSIGYGRKGGRRERVGGWGFPIGDEG  152 (301)
T ss_pred             eeeeeccCcchhHHHHHHHHhcCccceEEEecChHHHHhhccCCCCCEEEEecCCeEEEEEeCCeeEEecCcCccccccc
Confidence            77777665432  222111100                                                          


Q ss_pred             cHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccCCC-hHHhhcchHHHHHHHHhCCHHHHHHHHH
Q 023529          119 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPS-WARIAALVPVVVSCAEAGDEVANKILQD  197 (281)
Q Consensus       119 sg~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~-~~~~a~~a~~v~~~A~~GD~~A~~il~~  197 (281)
                      ||+|||+++++++++.+||+.+.+++...++.+|+. +++.++.+.|+... ...++++++.|+++|++||+.|++|+++
T Consensus       153 Sga~ig~~~L~~~lra~DG~~~~t~L~d~v~~~f~~-d~edlv~~~y~a~~~~~~ia~lap~V~~~A~~GD~~A~~Il~~  231 (301)
T COG2971         153 SGAWIGREALQEALRAFDGRREATPLTDAVMAEFNL-DPEDLVAFIYKAGPGDKKIAALAPAVFEAARKGDPVAIRILKE  231 (301)
T ss_pred             hHHHHHHHHHHHHHHHhcCCccCChHHHHHHHHhCC-CHHHHHHHHHhcCCchHHHHHhhHHHHHHHHcCCHHHHHHHHH
Confidence            999999999999999999999999999999999986 89999999998753 3459999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHhhh
Q 023529          198 SVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSF  277 (281)
Q Consensus       198 aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~~~  277 (281)
                      ++.++...+..+. .++       .+.++.+-||++...++  +.+.+++.+..        ++..+++.||..+|...+
T Consensus       232 aa~~i~~~~~~l~-~~~-------g~~~l~l~GG~~~~~~~--~~~~~~~~l~~--------~~~~D~~~GA~~~A~~~~  293 (301)
T COG2971         232 AAAYIATLLEALS-IFN-------GSEKLSLLGGLAPSYPY--YLSLFRRALLV--------PPIGDALSGAVLLALGRF  293 (301)
T ss_pred             HHHHHHHHHHHHh-ccc-------CCceEEEeccccccchh--hHHHHHHHhcC--------CccccHHHHHHHHHHHhh
Confidence            9999988887775 333       38899999999999874  67777776654        347789999999998776


Q ss_pred             hc
Q 023529          278 MN  279 (281)
Q Consensus       278 ~~  279 (281)
                      ..
T Consensus       294 ~~  295 (301)
T COG2971         294 GE  295 (301)
T ss_pred             hh
Confidence            54

>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis	Back alignment and domain information

>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase)	Back alignment and domain information

>PRK13310 N-acetyl-D-glucosamine kinase; Provisional	Back alignment and domain information

>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK09557 fructokinase; Reviewed	Back alignment and domain information

>PRK09698 D-allose kinase; Provisional	Back alignment and domain information

>PRK05082 N-acetylmannosamine kinase; Provisional	Back alignment and domain information

>PRK00292 glk glucokinase; Provisional	Back alignment and domain information

>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional	Back alignment and domain information

>PRK12408 glucokinase; Provisional	Back alignment and domain information

>PRK13311 N-acetyl-D-glucosamine kinase; Provisional	Back alignment and domain information

>TIGR00749 glk glucokinase, proteobacterial type	Back alignment and domain information

>TIGR02707 butyr_kinase butyrate kinase	Back alignment and domain information

>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit	Back alignment and domain information

>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative	Back alignment and domain information

>PTZ00288 glucokinase 1; Provisional	Back alignment and domain information

>PRK03011 butyrate kinase; Provisional	Back alignment and domain information

>PRK00976 hypothetical protein; Provisional	Back alignment and domain information

>PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2	Back alignment and domain information

>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D	Back alignment and domain information

>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15	Back alignment and domain information

>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	Back alignment and domain information

>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A	Back alignment and domain information

>PLN02914 hexokinase	Back alignment and domain information

>PRK00047 glpK glycerol kinase; Provisional	Back alignment and domain information

>COG0837 Glk Glucokinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related	Back alignment and domain information

>PTZ00107 hexokinase; Provisional	Back alignment and domain information

>PRK10939 autoinducer-2 (AI-2) kinase; Provisional	Back alignment and domain information

>TIGR01311 glycerol_kin glycerol kinase	Back alignment and domain information

>smart00732 YqgFc Likely ribonuclease with RNase H fold	Back alignment and domain information

>PRK04123 ribulokinase; Provisional	Back alignment and domain information

>PLN02405 hexokinase	Back alignment and domain information

>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN02362 hexokinase	Back alignment and domain information

>PLN02596 hexokinase-like	Back alignment and domain information

>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase	Back alignment and domain information

>PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames []	Back alignment and domain information

>PTZ00294 glycerol kinase-like protein; Provisional	Back alignment and domain information

>COG1069 AraB Ribulose kinase [Energy production and conversion]	Back alignment and domain information

>TIGR01234 L-ribulokinase L-ribulokinase	Back alignment and domain information

>TIGR01314 gntK_FGGY gluconate kinase, FGGY type	Back alignment and domain information

>TIGR01312 XylB D-xylulose kinase	Back alignment and domain information

>PLN02295 glycerol kinase	Back alignment and domain information

>PRK13317 pantothenate kinase; Provisional	Back alignment and domain information

>PRK10331 L-fuculokinase; Provisional	Back alignment and domain information

>COG0554 GlpK Glycerol kinase [Energy production and conversion]	Back alignment and domain information

>TIGR02628 fuculo_kin_coli L-fuculokinase	Back alignment and domain information

>PRK15027 xylulokinase; Provisional	Back alignment and domain information

>PRK15080 ethanolamine utilization protein EutJ; Provisional	Back alignment and domain information

>COG3426 Butyrate kinase [Energy production and conversion]	Back alignment and domain information

>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family	Back alignment and domain information

>PF00871 Acetate_kinase: Acetokinase family; InterPro: IPR000890 Acetate kinase, which is predominantly found in micro-organisms, facilitates the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation [, ]	Back alignment and domain information

>PRK13318 pantothenate kinase; Reviewed	Back alignment and domain information

>PLN02669 xylulokinase	Back alignment and domain information

>PRK13321 pantothenate kinase; Reviewed	Back alignment and domain information

>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type	Back alignment and domain information

>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein	Back alignment and domain information

>COG5026 Hexokinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated	Back alignment and domain information

>PF03727 Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P)	Back alignment and domain information

>PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P)	Back alignment and domain information

>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X	Back alignment and domain information

>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional	Back alignment and domain information

>COG4020 Uncharacterized protein conserved in archaea [Function unknown]	Back alignment and domain information

>PRK12440 acetate kinase; Reviewed	Back alignment and domain information

>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family	Back alignment and domain information

>PLN02666 5-oxoprolinase	Back alignment and domain information

>smart00842 FtsA Cell division protein FtsA	Back alignment and domain information

>PRK14878 UGMP family protein; Provisional	Back alignment and domain information

>PRK00180 acetate kinase A/propionate kinase 2; Reviewed	Back alignment and domain information

>TIGR00016 ackA acetate kinase	Back alignment and domain information

>PRK09604 UGMP family protein; Validated	Back alignment and domain information

>PRK12379 propionate/acetate kinase; Provisional	Back alignment and domain information

>PRK07157 acetate kinase; Provisional	Back alignment and domain information

>PRK12397 propionate kinase; Reviewed	Back alignment and domain information

>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>TIGR02627 rhamnulo_kin rhamnulokinase	Back alignment and domain information

>PRK09472 ftsA cell division protein FtsA; Reviewed	Back alignment and domain information

>PRK07058 acetate kinase; Provisional	Back alignment and domain information

>TIGR01174 ftsA cell division protein FtsA	Back alignment and domain information

>COG0282 ackA Acetate kinase [Energy production and conversion]	Back alignment and domain information

>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG1369 consensus Hexokinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF13941 MutL: MutL protein	Back alignment and domain information

>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related	Back alignment and domain information

>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length	Back alignment and domain information

>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]	Back alignment and domain information

>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12	Back alignment and domain information

>TIGR03725 bact_YeaZ universal bacterial protein YeaZ	Back alignment and domain information

>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF	Back alignment and domain information

>PRK13324 pantothenate kinase; Reviewed	Back alignment and domain information

>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T	Back alignment and domain information

>TIGR01175 pilM type IV pilus assembly protein PilM	Back alignment and domain information

>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein	Back alignment and domain information

>PRK13320 pantothenate kinase; Reviewed	Back alignment and domain information

>TIGR03723 bact_gcp putative glycoprotease GCP	Back alignment and domain information

>TIGR03722 arch_KAE1 universal archaeal protein Kae1	Back alignment and domain information

>COG3894 Uncharacterized metal-binding protein [General function prediction only]	Back alignment and domain information

>PRK13331 pantothenate kinase; Reviewed	Back alignment and domain information

>PRK13326 pantothenate kinase; Reviewed	Back alignment and domain information

>TIGR03723 bact_gcp putative glycoprotease GCP	Back alignment and domain information

>TIGR00671 baf pantothenate kinase, type III	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		281
2e2n_A		299	Crystal Structure Of Sulfolobus Tokodaii Hexokinase		3e-06

>pdb|2E2N|A Chain A, Crystal Structure Of Sulfolobus Tokodaii Hexokinase In The Apo Form Length = 299

Back alignment and structure

Iteration: 1

Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 14/158 (8%) Query: 119 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWAR-IAALV 177 S Y + +AL V++ DG T+L + +L T+ + DEL+ W+Y +A++ Sbjct: 143 SAYWVGRKALRKVLKMMDGLENKTILYNKVLKTINVKDLDELVMWSYTSSCQIDLVASIA 202 Query: 178 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANR 237 V A GD VA IL+ E LA + +++ + + + GG+ +N Sbjct: 203 KAVDEAANEGDTVAMDILKQGAELLASQAVYLARKIGTN--------KVYLKGGMFRSN- 253 Query: 238 RWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWN 275 I + L G + K P +GA +LA+ Sbjct: 254 ---IYHKFFTLYLEK-EGIISDLGKRSPEIGAVILAYK 287

PyMOL of 2e2n

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		281
2e2o_A		299	Hexokinase; acetate and sugar kinases, HSP70, acti	4e-37
2ch5_A		347	NAGK protein; transferase, N-acetylglucosamine, gl	2e-33
2ch5_A		347	NAGK protein; transferase, N-acetylglucosamine, gl	6e-11
1zc6_A		305	Probable N-acetylglucosamine kinase; NESG, Q7NU07_	7e-26
1zbs_A		291	Hypothetical protein PG1100; alpha-beta protein.,	2e-12
1zxo_A		291	Conserved hypothetical protein Q8A1P1; NESG, BTR25	1e-05

>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Length = 299	Back alignment and structure

 Score =  132 bits (334), Expect = 4e-37
 Identities = 56/309 (18%), Positives = 104/309 (33%), Gaps = 76/309 (24%)

Query: 23  VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMA 82
           +I+G+D G T T  +                 +   ++G  N+++VG   A E I++ + 
Sbjct: 3   IIVGVDAGGTKTKAVA---------YDCEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVK 53

Query: 83  D--------------------------------------------ALLKSGSNRSAVRAV 98
                                                        AL         V  +
Sbjct: 54  IAAKGEADVVGMGVAGLDSKFDWENFTPLASLIAPKVIIQHDGVIALFAETLGEPGVVVI 113

Query: 99  CLAVSGVNHPTDQQRIL---------NWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNIL 149
               S V     ++ +          +  S Y +  +AL  V++  DG    T+L + +L
Sbjct: 114 AGTGSVVEGYNGKEFLRVGGRGWLLSDDGSAYWVGRKALRKVLKMMDGLENKTILYNKVL 173

Query: 150 STLELSSPDELIGWTYVDPSW-ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKA 208
            T+ +   DEL+ W+Y        +A++   V   A  GD VA  IL+   E LA     
Sbjct: 174 KTINVKDLDELVMWSYTSSCQIDLVASIAKAVDEAANEGDTVAMDILKQGAELLASQAVY 233

Query: 209 VVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVG 268
           + +++         +  + + GG+  +N         ++       G +    K  P +G
Sbjct: 234 LARKI--------GTNKVYLKGGMFRSNIYHKFFTLYLEK-----EGIISDLGKRSPEIG 280

Query: 269 AALLAWNSF 277
           A +LA+   
Sbjct: 281 AVILAYKEV 289

PyMOL of 2e2o

>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Length = 347	Back alignment and structure

>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Length = 347	Back alignment and structure

>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 Length = 305	Back alignment and structure

>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5 Length = 291	Back alignment and structure

>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5 Length = 291	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		281
1zc6_A		305	Probable N-acetylglucosamine kinase; NESG, Q7NU07_	99.96
2ch5_A		347	NAGK protein; transferase, N-acetylglucosamine, gl	99.95
2e2o_A		299	Hexokinase; acetate and sugar kinases, HSP70, acti	99.94
2qm1_A		326	Glucokinase; alpha-beta structure, putative helix-	99.91
1zbs_A		291	Hypothetical protein PG1100; alpha-beta protein.,	99.91
3vgl_A		321	Glucokinase; ROK family, transferase; HET: BGC ANP	99.9
3vov_A		302	Glucokinase, hexokinase; ROK, sugar kinase, transf	99.89
1z05_A		429	Transcriptional regulator, ROK family; structural	99.88
4db3_A		327	Glcnac kinase, N-acetyl-D-glucosamine kinase; stru	99.88
4htl_A		297	Beta-glucoside kinase; structural genomics, sugar	99.88
1zxo_A		291	Conserved hypothetical protein Q8A1P1; NESG, BTR25	99.88
2hoe_A		380	N-acetylglucosamine kinase; TM1224, structural gen	99.87
2yhw_A		343	Bifunctional UDP-N-acetylglucosamine 2-epimerase/N	99.87
2ap1_A		327	Putative regulator protein; zinc binding protein,	99.86
3r8e_A		321	Hypothetical sugar kinase; ribonuclease H-like mot	99.86
1z6r_A		406	MLC protein; transcriptional repressor, ROK family	99.86
2aa4_A		289	Mannac kinase, putative N-acetylmannosamine kinase	99.85
3htv_A		310	D-allose kinase, allokinase; NP_418508.1, structur	99.85
2gup_A		292	ROK family protein; sugar kinase, streptococcus pn	99.81
1sz2_A		332	Glucokinase, glucose kinase; ATP-dependent, glucos	99.78
3epq_A		302	Putative fructokinase; SCRK, ADP binding, PSI2, MC	99.76
1saz_A		381	Probable butyrate kinase 2; askha (acetate and sug	99.69
2q2r_A		373	Glucokinase 1, putative; ATPase hexose kinase fami	99.67
3mcp_A		366	Glucokinase; structural genomics, joint center for	99.62
1bdg_A		451	Hexokinase; phosphotransferase; HET: GLC; 2.60A {S	99.58
1woq_A		267	Inorganic polyphosphate/ATP-glucomannokinase; tran	99.43
1cza_N		917	Hexokinase type I; structurally homologous domains	99.42
2yhx_A		457	Hexokinase B; transferase(phosphoryl,alcohol accep	99.38
1cza_N		917	Hexokinase type I; structurally homologous domains	99.35
3lm2_A		226	Putative kinase; structural genomics, joint center	99.26
3o8m_A		485	Hexokinase; rnaseh-like fold, glycolysis, glucose	99.09
1hux_A		270	Activator of (R)-2-hydroxyglutaryl-COA dehydratase	98.98
4ehu_A		276	Activator of 2-hydroxyisocaproyl-COA dehydratase;	98.82
4e1j_A		520	Glycerol kinase; structural genomics, PSI-biology,	98.6
2zf5_O		497	Glycerol kinase; hyperthermophilic archaeon, ATP-b	98.58
3g25_A		501	Glycerol kinase; IDP00743, ATP-binding, glycerol m	98.58
3ifr_A		508	Carbohydrate kinase, FGGY; xylulose kinase, SGX, s	98.57
2w40_A		503	Glycerol kinase, putative; closed conformation, ma	98.56
2p3r_A		510	Glycerol kinase; glycerol metabolism, allosteric r	98.5
2dpn_A		495	Glycerol kinase; thermus thermophilus HB8, structu	98.47
3hz6_A		511	Xylulokinase; xylulose, structural genomic, chromo	98.47
3h3n_X		506	Glycerol kinase; ATP-binding, glycerol metabolism,	98.46
3f9m_A		470	Glucokinase; hexokinase IV, ATP-binding, diabetes	98.44
2d4w_A		504	Glycerol kinase; alpha and beta protein, ribonucle	98.39
3ezw_A		526	Glycerol kinase; glycerol metabolism, allosteric r	98.39
3hm8_A		445	Hexokinase-3; glucose, glucose-6-phosphate, non-pr	98.34
3l0q_A		554	Xylulose kinase; xlylulose kinase, SGX, PSI, struc	98.32
3ll3_A		504	Gluconate kinase; xylulose kinase, nysgx, ATP, ADP	98.24
3jvp_A		572	Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su	98.23
4ijn_A		398	Acetate kinase, acetokinase; proprionate kinase, A	98.18
2itm_A		484	Xylulose kinase, xylulokinase; ATPase, FGGY kinase	98.17
3h6e_A		482	Carbohydrate kinase, FGGY; novosphingobium aromati	98.07
3i8b_A		515	Xylulose kinase; strain ATCC 15703 / DSM 20083, 11	97.92
3h1q_A		272	Ethanolamine utilization protein EUTJ; ethanolamin	97.8
2uyt_A		489	Rhamnulokinase; rhamnose degradation, IN-LINE phos	97.78
3djc_A		266	Type III pantothenate kinase; structural genomics,	97.53
4bc3_A		538	Xylulose kinase; transferase, glucuronate xyluloki	97.49
3r9p_A		391	ACKA; ssgcid, seattle structural genomics center f	97.45
2ivn_A		330	O-sialoglycoprotein endopeptidase; UP1 keops compl	97.21
2e1z_A		415	Propionate kinase; TDCD, native, acetate kinase, n	97.1
3eno_A		334	Putative O-sialoglycoprotein endopeptidase; hydrol	96.86
3bex_A		249	Type III pantothenate kinase; actin-like fold, ATP	96.77
2h3g_X		268	Biosynthetic protein; pantothenate kinase, anthrax	95.64
3sk3_A		415	Acetate kinase, acetokinase; actin-like ATPase dom	95.48
3zyy_X		631	Iron-sulfur cluster binding protein; iron-sulfur-b	95.43
2iir_A		403	Acetate kinase; transferase; 3.30A {Thermotoga mar	94.83
3khy_A		384	Propionate kinase; csgid, IDP01739, ATP-binding, n	94.46
1g99_A		408	Acetate kinase; alpha/beta, askha (acetate and sug	94.43
4a2a_A		419	Cell division protein FTSA, putative; cell cycle,	94.16
3r6m_A		213	YEAZ, resuscitation promoting factor; actin/HSP70	93.96
4h0o_A		404	Acetate kinase; askha (acetate and S kinase, HSC70	93.96
1nbw_A		607	Glycerol dehydratase reactivase alpha subunit; mol	93.63
2gel_A		231	Putative GRAM negative resuscitation promoting FA;	92.11
3vth_A		761	Hydrogenase maturation factor; carbamoyltransfer,	91.56
2i7n_A		360	Pantothenate kinase 1; PANK, transferase; HET: ACO	91.31
3en9_A		540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	91.19
2d0o_A		610	DIOL dehydratase-reactivating factor large subunit	90.73
2a6a_A		218	Hypothetical protein TM0874; glycoprotein endopept	90.64
2ews_A		287	Pantothenate kinase; PANK, structural genomics, st	90.01
2ych_A		377	Competence protein PILM; cell cycle, type IV pilus	89.15
3t69_A		330	Putative 2-dehydro-3-deoxygalactonokinase; structu	88.56
2ews_A		287	Pantothenate kinase; PANK, structural genomics, st	85.95
4g9i_A		772	Hydrogenase maturation protein HYPF; zinc finger,	85.53
3nuw_A		295	2-OXO-3-deoxygalactonate kinase; structural genomi	85.44
1vhx_A		150	Putative holliday junction resolvase; structural g	84.8
1nu0_A		138	Hypothetical protein YQGF; structural genomics, st	83.92
3cet_A		334	Conserved archaeal protein; Q6M145, MRR63, NESG, X	81.61
4h0p_A		438	Acetate kinase; askha (acetate and sugar kinas act	80.84

>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5	Back alignment and structure

Probab=99.96  E-value=1.9e-27  Score=215.16  Aligned_cols=227  Identities=24%  Similarity=0.309  Sum_probs=179.3

Q ss_pred             cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccc--ceeE
Q 023529           22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV--RAVC   99 (281)
Q Consensus        22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i--~~Ig   99 (281)
                      .|+||||+|||+++++++|+         +|+++.+.+.++.++. .+++++++.+.+.+++++++.+.+..++  .+||
T Consensus        11 ~~~lGiDiGgT~i~~~l~d~---------~G~il~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~ig   80 (305)
T 1zc6_A           11 RYLIGVDGGGTGTRIRLHAS---------DGTPLAMAEGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIG   80 (305)
T ss_dssp             CEEEEEEECSSCEEEEEEET---------TCCEEEEEEESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEE
T ss_pred             CEEEEEEcCccceEEEEEcC---------CCCEEEEEeCCCCCcc-cCHHHHHHHHHHHHHHHHHhcCCChhhhccceEE
Confidence            49999999999999999996         8999998877555543 5789999999999999999988877777  7999


Q ss_pred             EcccCCCChhhHHHHHH-h--h--------------------------------------------------------cH
Q 023529          100 LAVSGVNHPTDQQRILN-W--L--------------------------------------------------------SG  120 (281)
Q Consensus       100 ig~~G~~~~~~~~~l~~-~--~--------------------------------------------------------sg  120 (281)
                      ||+||+++++.+..++. .  .                                                        ++
T Consensus        81 ig~pG~v~~~~~~~l~~~~~~~~pv~v~NDa~aaa~ge~~~~~~v~v~~GTGigg~~i~~~G~~~~aGe~Gh~~~d~g~~  160 (305)
T 1zc6_A           81 LGLSGVHNRQWAGEFESQAPGFARLSLATDGYTTLLGAHGGQPGIIVALGTGSIGEALYPDGSHREAGGWGYPSGDEASG  160 (305)
T ss_dssp             EEESCCCTTSHHHHHHHTCCCCSEEEEECHHHHHHHHHTTTSSEEEEEESSSEEEEEECTTSCEEEESCCCTTTSCTTSH
T ss_pred             EEecCCCchHHHHHHHHhCCCCceEEEECCHHHHHHhhcCCCCeEEEEecCCeEEEEEeCCCcEEEecCcccccCCCchH
Confidence            99999987654321211 0  0                                                        67


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCCHHHHHHHHHHHH
Q 023529          121 YGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQDSVE  200 (281)
Q Consensus       121 ~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD~~A~~il~~aa~  200 (281)
                      +|+|+..+.......||+.+.|.+..++.++++ .+.++++++++.. ....++..++.|+++| +||+.|+++++++++
T Consensus       161 ~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~~v~~~a-~GD~~A~~i~~~~~~  237 (305)
T 1zc6_A          161 AWLGQRAAQLTQMALDGRHSHSPLTRAVLDFVG-GDWQAMMAWNGRA-TPAQFARLAPLVLSAA-RVDPEADALLRQAGE  237 (305)
T ss_dssp             HHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHT-SSHHHHHHHHHTC-CHHHHHTTHHHHHHHT-TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHC-cCHHHHHHHHhcc-CHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence            899999988887788998888999888888886 4688888776643 2234455678999999 999999999999999


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHhhhhcc
Q 023529          201 ELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSFMNA  280 (281)
Q Consensus       201 ~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~~~~~~  280 (281)
                      +|+.+++++++. |        |+.|||+||++....++ |.+.+++.         +..++.++++||+++|++.+.++
T Consensus       238 ~L~~~l~~l~~~-~--------p~~VvlgGgv~~~~~~~-l~~~l~~~---------i~~~~~~~~~GAa~la~~~~~~~  298 (305)
T 1zc6_A          238 DAWAIARALDPQ-D--------ELPVALCGGLGQALRDW-LPPGFRQR---------LVAPQGDSAQGALLLLQRPSTRL  298 (305)
T ss_dssp             HHHHHHHHHCTT-C--------CSCEEEESHHHHHTGGG-SCHHHHHH---------CCCCSSCHHHHHHHHTC------
T ss_pred             HHHHHHHHHhcC-C--------CCeEEEECCchHhHHHH-HHHHHHhh---------ccCCCCCHHHHHHHHHhhhccch
Confidence            999999999998 8        99999999998643333 66776663         23467889999999998877654

PyMOL of 1zc6

>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*	Back alignment and structure

>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*	Back alignment and structure

>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}	Back alignment and structure

>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5	Back alignment and structure

>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*	Back alignment and structure

>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}	Back alignment and structure

>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10	Back alignment and structure

>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}	Back alignment and structure

>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}	Back alignment and structure

>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5	Back alignment and structure

>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10	Back alignment and structure

>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A	Back alignment and structure

>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10	Back alignment and structure

>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}	Back alignment and structure

>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A	Back alignment and structure

>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10	Back alignment and structure

>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}	Back alignment and structure

>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10	Back alignment and structure

>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*	Back alignment and structure

>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*	Back alignment and structure

>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}	Back alignment and structure

>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}	Back alignment and structure

>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3	Back alignment and structure

>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10	Back alignment and structure

>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*	Back alignment and structure

>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A	Back alignment and structure

>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*	Back alignment and structure

>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}	Back alignment and structure

>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*	Back alignment and structure

>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5	Back alignment and structure

>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A	Back alignment and structure

>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}	Back alignment and structure

>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}	Back alignment and structure

>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*	Back alignment and structure

>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}	Back alignment and structure

>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*	Back alignment and structure

>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}	Back alignment and structure

>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*	Back alignment and structure

>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O	Back alignment and structure

>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*	Back alignment and structure

>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}	Back alignment and structure

>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*	Back alignment and structure

>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}	Back alignment and structure

>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*	Back alignment and structure

>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*	Back alignment and structure

>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}	Back alignment and structure

>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A	Back alignment and structure

>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}	Back alignment and structure

>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}	Back alignment and structure

>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}	Back alignment and structure

>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*	Back alignment and structure

>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}	Back alignment and structure

>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*	Back alignment and structure

>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A	Back alignment and structure

>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*	Back alignment and structure

>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*	Back alignment and structure

>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}	Back alignment and structure

>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A	Back alignment and structure

>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}	Back alignment and structure

>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A	Back alignment and structure

>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}	Back alignment and structure

>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}	Back alignment and structure

>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}	Back alignment and structure

>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*	Back alignment and structure

>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*	Back alignment and structure

>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}	Back alignment and structure

>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}	Back alignment and structure

>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6	Back alignment and structure

>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A	Back alignment and structure

>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A	Back alignment and structure

>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*	Back alignment and structure

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*	Back alignment and structure

>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A	Back alignment and structure

>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9	Back alignment and structure

>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14	Back alignment and structure

>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}	Back alignment and structure

>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}	Back alignment and structure

>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14	Back alignment and structure

>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}	Back alignment and structure

>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8	Back alignment and structure

>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A	Back alignment and structure

>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A	Back alignment and structure

>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		281
d2ch5a1		227	c.55.1.5 (A:118-344) N-acetylglucosamine kinase, N	4e-25
d1zc6a2		171	c.55.1.5 (A:122-292) Probable N-acetylglucosamine	2e-22
d1zbsa1		176	c.55.1.5 (A:108-283) Hypothetical protein PG1100 {	1e-09
d2ch5a2		117	c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAG	2e-09
d1zxoa2		174	c.55.1.5 (A:107-280) Hypothetical protein BT3618 {	2e-07
d1zc6a1		114	c.55.1.5 (A:8-121) Probable N-acetylglucosamine ki	1e-05
d1zbsa2		107	c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Po	4e-05

>d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Length = 227	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: N-acetylglucosamine kinase, NAGK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (242), Expect = 4e-25
 Identities = 30/169 (17%), Positives = 57/169 (33%), Gaps = 10/169 (5%)

Query: 119 SGYGIAAQALTAVIRAYDGRGPDTMLTS----NILSTLELSSPDELIGWTYVDPSWARIA 174
           S Y IA QA+  V  + D               +    ++     ++   Y D    R A
Sbjct: 38  SAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFA 97

Query: 175 ALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLE 234
                +   A+ GD ++  I + + E L   + AV+  +      GK   P++ VG V +
Sbjct: 98  GFCRKIAEGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWK 157

Query: 235 ANR------RWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSF 277
           +           + +         +     ++ +   A+G A L     
Sbjct: 158 SWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASLGARHI 206

PyMOL of d2ch5a1

>d1zc6a2 c.55.1.5 (A:122-292) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Length = 171	Back information, alignment and structure

>d1zbsa1 c.55.1.5 (A:108-283) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} Length = 176	Back information, alignment and structure

>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Length = 117	Back information, alignment and structure

>d1zxoa2 c.55.1.5 (A:107-280) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 174	Back information, alignment and structure

>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Length = 114	Back information, alignment and structure

>d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} Length = 107	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		281
d2ch5a1		227	N-acetylglucosamine kinase, NAGK {Human (Homo sapi	99.85
d1zc6a2		171	Probable N-acetylglucosamine kinase CV2896 {Chromo	99.68
d2ch5a2		117	N-acetylglucosamine kinase, NAGK {Human (Homo sapi	99.59
d1sz2a1		319	Glucokinase Glk {Escherichia coli [TaxId: 562]}	99.58
d1huxa_		259	Hydroxyglutaryl-CoA dehydratase component A {Acida	99.53
d1zc6a1		114	Probable N-acetylglucosamine kinase CV2896 {Chromo	99.51
d1z05a2		197	Transcriptional regulator VC2007 {Vibrio cholerae	99.43
d2aa4a2		170	N-acetylmannosamine kinase NanK {Escherichia coli	99.39
d2ewsa1		267	Type II pantothenate kinase, CoaW {Staphylococcus	99.38
d2gupa2		175	Hypothetical protein SP2142 {Streptococcus pneumon	99.31
d1z6ra3		196	Mlc protein {Escherichia coli [TaxId: 562]}	99.29
d2ap1a1		186	Putative regulator protein YcfX {Salmonella typhim	99.21
d2hoea2		169	N-acetylglucosamine kinase {Thermotoga maritima [T	99.21
d1zbsa1		176	Hypothetical protein PG1100 {Porphyromonas gingiva	99.19
d2ap1a2		117	Putative regulator protein YcfX {Salmonella typhim	99.12
d2hoea3		128	N-acetylglucosamine kinase {Thermotoga maritima [T	99.1
d1z05a3		128	Transcriptional regulator VC2007 {Vibrio cholerae	99.06
d1zbsa2		107	Hypothetical protein PG1100 {Porphyromonas gingiva	98.96
d2aa4a1		119	N-acetylmannosamine kinase NanK {Escherichia coli	98.92
d1z6ra2		129	Mlc protein {Escherichia coli [TaxId: 562]}	98.91
d1woqa1		129	Inorganic polyphosphate/ATP-glucomannokinase PPGMK	98.89
d2gupa1		114	Hypothetical protein SP2142 {Streptococcus pneumon	98.86
d1zxoa2		174	Hypothetical protein BT3618 {Bacteroides thetaiota	98.84
d1xc3a2		176	Putative fructokinase YhdR {Bacillus subtilis [Tax	98.76
d1xc3a1		118	Putative fructokinase YhdR {Bacillus subtilis [Tax	98.71
d1q18a1		110	Glucokinase Glk {Escherichia coli [TaxId: 562]}	98.48
d2p3ra1		252	Glycerol kinase {Escherichia coli [TaxId: 562]}	98.44
d1woqa2		124	Inorganic polyphosphate/ATP-glucomannokinase PPGMK	98.28
d1r59o1		252	Glycerol kinase {Enterococcus casseliflavus [TaxId	98.09
d1czan2		243	Mammalian type I hexokinase {Human (Homo sapiens)	96.8
d1bdga1		208	Hexokinase {Blood fluke (Schistosoma mansoni) [Tax	96.72
d1v4sa2		243	Glucokinase {Human (Homo sapiens) [TaxId: 9606]}	96.71
d1czan4		243	Mammalian type I hexokinase {Human (Homo sapiens)	96.53
d1saza2		203	butyrate kinase 2 {Thermotoga maritima [TaxId: 233	96.51
d1bdga2		237	Hexokinase {Blood fluke (Schistosoma mansoni) [Tax	96.38
d1czan3		205	Mammalian type I hexokinase {Human (Homo sapiens)	96.29
d1g99a2		201	Acetate kinase {Archaeon Methanosarcina thermophil	96.22
d1ig8a2		262	Hexokinase {Baker's yeast (Saccharomyces cerevisia	96.19
d1v4sa1		205	Glucokinase {Human (Homo sapiens) [TaxId: 9606]}	96.14
d2e1za2		205	Propionate kinase {Salmonella typhimurium [TaxId:	96.08
d1ig8a1		207	Hexokinase {Baker's yeast (Saccharomyces cerevisia	95.98
d1czan1		207	Mammalian type I hexokinase {Human (Homo sapiens)	95.91
d3bzka5		149	Transcriptional accessory factor Tex {Pseudomonas	95.59
d1zxoa1		104	Hypothetical protein BT3618 {Bacteroides thetaiota	95.13
d2d0oa2		241	Diol dehydratase-reactivating factor large subunit	94.96
d1okja1		106	Hypothetical protein YeaZ {Escherichia coli [TaxId	94.93
d1e4ft1		193	Cell division protein FtsA {Thermotoga maritima [T	94.26
d1nbwa2		239	ATPase domain of the glycerol dehydratase reactiva	93.07
d2i7na2		212	Pantothenate kinase 1, PANK1 {Human (Homo sapiens)	92.84
d2a6aa1		103	Hypothetical protein TM0874 {Thermotoga maritima [	91.93
d1r59o2		235	Glycerol kinase {Enterococcus casseliflavus [TaxId	88.29
d1saza1		172	butyrate kinase 2 {Thermotoga maritima [TaxId: 233	88.26
d3bexa1		118	Type III pantothenate kinase, CoaX {Thermotoga mar	87.98
d2p3ra2		247	Glycerol kinase {Escherichia coli [TaxId: 562]}	86.07
d1nu0a_		138	Hypothetical protein YqgF (RuvX) {Escherichia coli	81.63
d1iv0a_		98	Hypothetical protein, YqgF homologue {Thermus ther	81.57

>d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: N-acetylglucosamine kinase, NAGK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-20  Score=161.97  Aligned_cols=158  Identities=19%  Similarity=0.250  Sum_probs=134.4

Q ss_pred             cHHHHHHHHHHHHHHhhcCCCCCc----hhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCCHHHHHH
Q 023529          119 SGYGIAAQALTAVIRAYDGRGPDT----MLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKI  194 (281)
Q Consensus       119 sg~~iG~~~l~~~~~~~dg~~~~~----~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD~~A~~i  194 (281)
                      ||+|||++++++++...||+.+.+    .+...+..++++.+...++...+...++.+++.+++.|+++|++||+.|++|
T Consensus        38 sg~~iG~~al~~~~~~~DG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~iA~la~~V~~aA~~GD~~A~~I  117 (227)
T d2ch5a1          38 SAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDPLSRYI  117 (227)
T ss_dssp             SHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHHHHTTCHHHHHH
T ss_pred             cHhHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHhcCCCCHHHHHHHHHhcccHHHHHHhhhhhhhhhhcchHHHHHH
Confidence            999999999999999999988765    4566677788877788888777765566788999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC--------CCceeeCCCCChh
Q 023529          195 LQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY--------PGAVPIRPKVEPA  266 (281)
Q Consensus       195 l~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~--------p~~~i~~~~~~~~  266 (281)
                      +++++++|++.+.++++.+|.+...++++.+|+++|||+.++++  +++.|++.|.++.        |.+.++.+..+|+
T Consensus       118 l~~aa~~La~~i~~~~~~l~~~~~~~~~~~~Vvl~Ggv~~~~~~--l~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~p~  195 (227)
T d2ch5a1         118 FRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWEL--LKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSA  195 (227)
T ss_dssp             HHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHH--HHHHHHHHHHHHC---CCCSCSEEEEEEESSCTH
T ss_pred             HHHHHHHHHHHHHHHHHhcCchhhccccCCCeEEechHhhcchH--HHHHHHHHHHHhcchhhcccCCeeEeecCCCccH
Confidence            99999999999999999999544444556679999999999873  8999999998864        3455667889999


Q ss_pred             HHHHHHHHhhhh
Q 023529          267 VGAALLAWNSFM  278 (281)
Q Consensus       267 ~GAa~la~~~~~  278 (281)
                      +||++||++...
T Consensus       196 ~GAa~LA~~~~g  207 (227)
T d2ch5a1         196 LGGASLGARHIG  207 (227)
T ss_dssp             HHHHHHHHHTTT
T ss_pred             HHHHHHHHHHcC
Confidence            999999998764

PyMOL of d2ch5a1

>d1zc6a2 c.55.1.5 (A:122-292) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}	Back information, alignment and structure

>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]}	Back information, alignment and structure

>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}	Back information, alignment and structure

>d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure

>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]}	Back information, alignment and structure

>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}	Back information, alignment and structure

>d1z6ra3 c.55.1.10 (A:211-406) Mlc protein {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1zbsa1 c.55.1.5 (A:108-283) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]}	Back information, alignment and structure

>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure

>d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]}	Back information, alignment and structure

>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}	Back information, alignment and structure

>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}	Back information, alignment and structure

>d1zxoa2 c.55.1.5 (A:107-280) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d1xc3a2 c.55.1.10 (A:119-294) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1woqa2 c.55.1.10 (A:140-263) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}	Back information, alignment and structure

>d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]}	Back information, alignment and structure

>d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]}	Back information, alignment and structure

>d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1saza2 c.55.1.2 (A:173-375) butyrate kinase 2 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]}	Back information, alignment and structure

>d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1g99a2 c.55.1.2 (A:198-398) Acetate kinase {Archaeon Methanosarcina thermophila [TaxId: 2210]}	Back information, alignment and structure

>d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]}	Back information, alignment and structure

>d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2e1za2 c.55.1.2 (A:193-397) Propionate kinase {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]}	Back information, alignment and structure

>d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d1zxoa1 c.55.1.5 (A:3-106) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d2d0oa2 c.55.1.6 (A:1-92,A:255-403) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]}	Back information, alignment and structure

>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1nbwa2 c.55.1.6 (A:2-91,A:257-405) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]}	Back information, alignment and structure

>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]}	Back information, alignment and structure

>d1saza1 c.55.1.2 (A:1-172) butyrate kinase 2 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d3bexa1 c.55.1.13 (A:1-118) Type III pantothenate kinase, CoaX {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure