Citrus Sinensis ID: 023788

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------
MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
ccccccccccEEEEcHHHHHHHHHHcHHccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEccccccccccccEEEEEEccEEEcccccccccccccccHHHHHHHHHHHHccccEEEEEEcccccEEEEEccEEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEcccccccccEEcccccEEEEcccEEEEEccEEEEEcccccHHHHHHHHHHHHccccccccccccEEEcc
EEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHHcccEEEEEEccEEEcccccccccEccccHHHHHHHHHHHHHcccccEEEEccccccEEEEEcccEEEEEEccEEEEccHHHcccccHHHHHHHHHHHHccccEEEcccEccHHHHccEEEEEEcccEEEEEEEEEEcccEEEEcccccHHHHHHHHHHHcccccccccccccEEEEc
mkayrkedgqlvlfrpdqnairlqtgaermcmpspsiDQFIDAVKQTALankrwvpppgkgslyirpllvgsgpilglapapeytflvfaspvgnyfkeglaplnlyvedefhratpggaggvkaISNYAPVLKAISRAknrgfsdvlYLDSVnkknleevsscnifilkgniistpatsgtilaGITRKSIIEIASdcgfqveeraipvdelleadevfcTGTAVvvapvgsityrgkriefktgaqSVSRELYSTLVGIQtglikdnkgwtvein
mkayrkedgqlvlfrpdqnAIRLQTGAERMCMPSPSIDQFIDAVKQTALAnkrwvpppgkGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKgniistpatsgtILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVvvapvgsityrgkriefktgaqsvsrELYSTLVgiqtglikdnkgwtvein
MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
***********VLFR****AIRLQT****MCM**PSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTV***
MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
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MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query277 2.2.26 [Sep-21-2011]
Q9M439388 Branched-chain-amino-acid yes no 0.996 0.711 0.768 1e-127
Q9FYA6415 Branched-chain-amino-acid no no 1.0 0.667 0.687 1e-115
Q9M401413 Branched-chain-amino-acid no no 1.0 0.670 0.677 1e-113
Q93Y32384 Branched-chain-amino-acid no no 0.996 0.718 0.684 1e-108
Q9LPM9356 Branched-chain-amino-acid no no 0.996 0.775 0.613 1e-104
Q9LPM8367 Putative branched-chain-a no no 0.996 0.752 0.617 1e-102
Q9LE06354 Methionine aminotransfera no no 0.996 0.779 0.574 2e-97
P39576363 Branched-chain-amino-acid yes no 0.996 0.760 0.420 9e-64
O31461356 Branched-chain-amino-acid no no 0.996 0.775 0.433 2e-58
Q6GJB4358 Probable branched-chain-a yes no 0.985 0.762 0.411 2e-57
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  456 bits (1172), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 212/276 (76%), Positives = 252/276 (91%)

Query: 2   KAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG 61
           KAYRKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG
Sbjct: 113 KAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKG 172

Query: 62  SLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAG 121
           +LYIRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFKEG+A LNLYVE+E+ RA PGGAG
Sbjct: 173 TLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAG 232

Query: 122 GVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSG 181
           GVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV KK LEE SSCN+F++KG  ISTPAT+G
Sbjct: 233 GVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNG 292

Query: 182 TILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRI 241
           TIL GITRKS++EIASD G+QV E+A+ VDE+++ADEVFCTGTAVVVAPVG+ITY+ KR+
Sbjct: 293 TILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRV 352

Query: 242 EFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 277
           E+KTG +SV ++L S LVGIQTGLI+DNKGW  +IN
Sbjct: 353 EYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|O31461|ILVE1_BACSU Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis (strain 168) GN=ilvE PE=1 SV=1 Back     alignment and function description
>sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query277
255537936 399 branched-chain amino acid aminotransfera 0.996 0.691 0.782 1e-128
224063417318 predicted protein [Populus trichocarpa] 0.996 0.867 0.778 1e-126
15218409 388 branched-chain-amino-acid aminotransfera 0.996 0.711 0.768 1e-126
186478317318 branched-chain-amino-acid aminotransfera 0.996 0.867 0.768 1e-126
225458938 387 PREDICTED: branched-chain-amino-acid ami 0.996 0.713 0.757 1e-125
297843816 388 ATBCAT-2 [Arabidopsis lyrata subsp. lyra 0.996 0.711 0.753 1e-124
407317193 393 mitochodrial branched-chain aminotransfe 0.996 0.702 0.75 1e-123
302142143 387 unnamed protein product [Vitis vinifera] 0.996 0.713 0.757 1e-123
449450320 390 PREDICTED: branched-chain-amino-acid ami 1.0 0.710 0.765 1e-123
288310302 389 branched chain amino acid transaminase [ 1.0 0.712 0.765 1e-123
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 216/276 (78%), Positives = 252/276 (91%)

Query: 2   KAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG 61
           KAYRKEDG+L+LFRPDQNAIR+Q GA+RMCMP PSIDQF+DAVKQ A +NKRWVPPPGKG
Sbjct: 124 KAYRKEDGRLLLFRPDQNAIRMQMGADRMCMPCPSIDQFVDAVKQVAFSNKRWVPPPGKG 183

Query: 62  SLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAG 121
           +LYIRPLL+GSGP+LGLAPAPEYTFLV+ASPVGNYFKEG APLNLY+E+EFHRA+ GGAG
Sbjct: 184 TLYIRPLLMGSGPVLGLAPAPEYTFLVYASPVGNYFKEGSAPLNLYIEEEFHRASRGGAG 243

Query: 122 GVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSG 181
           GVK+I+NYAPVLKAI+RAK RGFSDVLYLD+VNKK LEEVSSCNIF++KGN+IS+P  +G
Sbjct: 244 GVKSITNYAPVLKAIARAKGRGFSDVLYLDAVNKKYLEEVSSCNIFVVKGNVISSPPANG 303

Query: 182 TILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRI 241
           TIL G+TR+SIIEIA D  +QVEERAIPVDEL++ADEVFCTGTAV VAPVGSITY+ +RI
Sbjct: 304 TILQGVTRRSIIEIACDLNYQVEERAIPVDELMDADEVFCTGTAVGVAPVGSITYQDRRI 363

Query: 242 EFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 277
           E+K  A+SVS+EL STL GI+ GLI+D KGW +E+ 
Sbjct: 364 EYKIRAESVSQELQSTLEGIKRGLIEDKKGWILEMQ 399

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224063417|ref|XP_002301136.1| predicted protein [Populus trichocarpa] gi|222842862|gb|EEE80409.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|186478317|ref|NP_001031016.2| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|3540183|gb|AAC34333.1| Highly Similar to branched-chain amino acid aminotransferase [Arabidopsis thaliana] gi|227206244|dbj|BAH57177.1| AT1G10070 [Arabidopsis thaliana] gi|332190418|gb|AEE28539.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225458938|ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] gi|302142142|emb|CBI19345.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297843816|ref|XP_002889789.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] gi|297335631|gb|EFH66048.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|407317193|gb|AFU07634.1| mitochodrial branched-chain aminotransferase 1 [Humulus lupulus] Back     alignment and taxonomy information
>gi|302142143|emb|CBI19346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query277
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 0.996 0.711 0.768 3.1e-115
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 1.0 0.670 0.677 1.1e-103
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.996 0.718 0.684 1.2e-97
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.996 0.775 0.613 6.8e-95
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.996 0.752 0.617 1e-93
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.996 0.779 0.574 5.1e-90
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.996 0.773 0.431 4.5e-59
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 1.0 0.752 0.394 1.9e-53
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.996 0.75 0.399 3.1e-51
ASPGD|ASPL0000058845394 AN0385 [Emericella nidulans (t 0.974 0.685 0.383 8.1e-44
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1136 (405.0 bits), Expect = 3.1e-115, P = 3.1e-115
 Identities = 212/276 (76%), Positives = 252/276 (91%)

Query:     2 KAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG 61
             KAYRKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG
Sbjct:   113 KAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKG 172

Query:    62 SLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAG 121
             +LYIRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFKEG+A LNLYVE+E+ RA PGGAG
Sbjct:   173 TLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAG 232

Query:   122 GVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSG 181
             GVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV KK LEE SSCN+F++KG  ISTPAT+G
Sbjct:   233 GVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNG 292

Query:   182 TILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRI 241
             TIL GITRKS++EIASD G+QV E+A+ VDE+++ADEVFCTGTAVVVAPVG+ITY+ KR+
Sbjct:   293 TILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRV 352

Query:   242 EFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 277
             E+KTG +SV ++L S LVGIQTGLI+DNKGW  +IN
Sbjct:   353 EYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
ASPGD|ASPL0000058845 AN0385 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZJF1ILVE_HELPJ2, ., 6, ., 1, ., 4, 20.39640.98910.8058yesno
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.76810.99630.7113yesno
O26004ILVE_HELPY2, ., 6, ., 1, ., 4, 20.39640.98910.8058yesno
P0AB81ILVE_ECOL62, ., 6, ., 1, ., 4, 20.30510.91330.8187yesno
P0A1A5ILVE_SALTY2, ., 6, ., 1, ., 4, 20.30520.94220.8446yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.963
4th Layer2.6.1.420.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query277
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 1e-173
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 1e-157
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-151
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-135
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-132
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-117
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 1e-104
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 1e-77
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 5e-66
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 3e-37
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 1e-34
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 2e-34
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 1e-28
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 8e-27
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 5e-24
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 3e-21
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 4e-18
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 1e-16
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 2e-15
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 2e-13
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 2e-13
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 3e-13
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 5e-13
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 3e-10
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 2e-07
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  484 bits (1248), Expect = e-173
 Identities = 201/278 (72%), Positives = 243/278 (87%), Gaps = 1/278 (0%)

Query: 1   MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK 60
           +KAYRKEDG ++LFRP++NAIR++ GAERMCMP+P+++QF++AVK+T LANKRWVPPPGK
Sbjct: 126 LKAYRKEDGNILLFRPEENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGK 185

Query: 61  GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGA 120
           GSLYIRPLL+GSG +LGLAPAPEYTFL++ SPVGNYFKEG+AP+NL VE+EFHRATPGG 
Sbjct: 186 GSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGT 245

Query: 121 GGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATS 180
           GGVK I NYA VLKA S AK +G+SDVLYLD V+KK LEEVSSCNIFI+K N+ISTPA  
Sbjct: 246 GGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIK 305

Query: 181 GTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKR 240
           GTIL GITRKSII++A   GFQVEER + VDELLEADEVFCTGTAVVV+PVGSITY+GKR
Sbjct: 306 GTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKR 365

Query: 241 IEF-KTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 277
           + + + G  +VS++LY+ L  +Q GLI+DN  WTVE++
Sbjct: 366 VSYGEGGFGTVSQQLYTVLTSLQMGLIEDNMNWTVELS 403

Length = 403
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 277
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK13356286 aminotransferase; Provisional 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 100.0
PRK07101187 hypothetical protein; Provisional 100.0
>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information 
Probab=100.00  E-value=3.5e-60  Score=431.82  Aligned_cols=277  Identities=77%  Similarity=1.249  Sum_probs=252.0

Q ss_pred             CceEecCCCcEeeeChhhHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCCcccCC
Q 023788            1 MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAP   80 (277)
Q Consensus         1 ~~~~rv~~G~~~~f~l~~Hl~RL~~sa~~l~i~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ir~~~~g~~~~~~~~~   80 (277)
                      ||+||..||++.+|++++|++||.+||+.|+|+.|+.+++.+.+.++++.|+.|+|+...+.+|||++++|+++.+|+.|
T Consensus       112 lkayr~~~G~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p  191 (388)
T PLN02259        112 TKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGP  191 (388)
T ss_pred             EEEEECCCCeEeecCcHHHHHHHHHhHHHhCCCCcCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCcCC
Confidence            58888889999999999999999999999999988899999999999999999998766678999998888876678877


Q ss_pred             CCCcEEEEEEEecCccccCCCcCeEEEeeecccccCCCCCCCCccccCcHHHHHHHHHHHhcCCCeEEEEccCCCCeEEe
Q 023788           81 APEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEE  160 (277)
Q Consensus        81 ~~~~~~~i~~~p~~~~~~~g~~~i~l~~~~~~~r~~~~~l~~~Kt~~~y~~~~~a~~ea~~~g~de~llld~~~~G~v~E  160 (277)
                      +.++++++++.|.++++..|++++++.+.+++.|..|..++++|+.+||+++++++++|+++|+||+||+|..++|+|+|
T Consensus       192 ~~~~~~~i~~~p~~~~~~~g~~~i~l~v~~~~~Ra~p~~~g~~K~~~NY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E  271 (388)
T PLN02259        192 APEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEE  271 (388)
T ss_pred             CCCcEEEEEEEechhhhhcCcceEEEEeecceeccCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEecCCCCCEEEE
Confidence            66788999999988777778777777766667888888889999987999999999999999999999999622699999


Q ss_pred             eCceeEEEEECCEEEccCCCCCcccchHHHHHHHHHHhCCCcEEEEecChhhHhcccEEEEecCCCceEEEEEEeeCCeE
Q 023788          161 VSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKR  240 (277)
Q Consensus       161 ~t~sNvf~v~~g~l~TP~l~~~~L~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfltns~~gi~pV~~i~~~~~~  240 (277)
                      ++++|+|++++++|+||+++.+||+||||+.||++|++.|++|+|+.++++||.+|||+|+|||+.+|+||++|++.++.
T Consensus       272 ~~~sNlF~v~~~~l~TP~l~~~iL~GITR~sIl~la~~~G~~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~~~~  351 (388)
T PLN02259        272 ASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKR  351 (388)
T ss_pred             cCcEEEEEEECCEEEcCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHHHHHhCCEEEEcCCcceEEEEEEEecCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999875666


Q ss_pred             EeeCCCccHHHHHHHHHHHHhHhcCCCCCCCCceecC
Q 023788          241 IEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN  277 (277)
Q Consensus       241 i~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  277 (277)
                      +.++++.||++++|++.|.++|+|+.+|.++|+++||
T Consensus       352 ~~~~~~~g~~t~~L~~~l~~iq~G~~~~~~~W~~~~~  388 (388)
T PLN02259        352 VEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN  388 (388)
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHcCCCCCCCCCeEECC
Confidence            4455556899999999999999999999999999986

>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query277
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 2e-58
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 6e-56
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 6e-56
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 3e-55
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 2e-52
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 2e-37
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 9e-37
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 2e-36
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 2e-36
1ekf_A365 Crystallographic Structure Of Human Branched Chain 5e-36
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 5e-36
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 1e-34
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 1e-33
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 2e-20
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 2e-20
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 3e-14
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 4e-14
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 2e-09
3sno_A315 Crystal Structure Of A Hypothetical Aminotransferas 5e-07
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 3e-06
1daa_A282 Crystallographic Structure Of D-Amino Acid Aminotra 3e-06
3lqs_A280 Complex Structure Of D-Amino Acid Aminotransferase 3e-06
3daa_A277 Crystallographic Structure Of D-Amino Acid Aminotra 4e-06
1g2w_A282 E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D 4e-06
5daa_A277 E177k Mutant Of D-Amino Acid Aminotransferase Compl 4e-06
1a0g_A282 L201a Mutant Of D-Amino Acid Aminotransferase Compl 2e-05
1et0_A269 Crystal Structure Of Aminodeoxychorismate Lyase Fro 6e-05
2y4r_A292 Crystal Structure Of 4-Amino-4-Deoxychorismate Lyas 2e-04
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure 
Iteration: 1

 Score =  222 bits (565), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/282 (43%), Positives = 168/282 (59%), Gaps = 6/282 (2%)
Query: 1   MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK 60
           +KAYR +DG + LFRP+ NA RLQ  A+R+ MP    D+FIDA KQ   AN+ +VPP G 
Sbjct: 64  LKAYRTKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGT 123
Query: 61  G-SLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGG 119
           G +LY+RPLL+G G ++G+ PA EY F +FA PVGNYFK GLAP N  ++D++ RA P G
Sbjct: 124 GATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHG 183
Query: 120 AGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIF-ILKGNIISTPA 178
            G  K   NYA  L     A  R FSDV+YLD      +EEV S N F I K N   TP 
Sbjct: 184 TGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITP- 242
Query: 179 TSGTILAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYR 237
            S +IL  +T+ S++ +A    G +  E  + VDEL +  E    GTA V++P+G + + 
Sbjct: 243 LSPSILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHG 302
Query: 238 GKRIEF--KTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 277
                F  +T    V+ +LY  L GIQ G +K  +GW  +++
Sbjct: 303 DDFHVFYSETEVGPVTHKLYDELTGIQFGDVKAPEGWIYKVD 344
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure
>pdb|3SNO|A Chain A, Crystal Structure Of A Hypothetical Aminotransferase (Ncgl2491) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.60 A Resolution Length = 315 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure
>pdb|1DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Complexed With Pyridoxal-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3LQS|A Chain A, Complex Structure Of D-Amino Acid Aminotransferase And 4-Amino-4,5- Dihydro-Thiophenecarboxylic Acid (Adta) Length = 280 Back     alignment and structure
>pdb|3DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Inactivated By Pyridoxyl-D-Alanine Length = 277 Back     alignment and structure
>pdb|1G2W|A Chain A, E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D-amino Acid Aminotransferase Length = 282 Back     alignment and structure
>pdb|5DAA|A Chain A, E177k Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 277 Back     alignment and structure
>pdb|1A0G|A Chain A, L201a Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|1ET0|A Chain A, Crystal Structure Of Aminodeoxychorismate Lyase From Escherichia Coli Length = 269 Back     alignment and structure
>pdb|2Y4R|A Chain A, Crystal Structure Of 4-Amino-4-Deoxychorismate Lyase From Pseudomonas Aeruginosa Length = 292 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query277
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-144
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-135
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-134
1iye_A309 Branched-chain amino acid aminotransferase; hexame 5e-44
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 1e-43
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 9e-43
3u0g_A328 Putative branched-chain amino acid aminotransfera; 2e-42
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 6e-41
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 4e-40
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 3e-38
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 4e-36
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 5e-34
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 1e-31
3qqm_A221 MLR3007 protein; structural genomics, joint center 6e-24
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 2e-15
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query277
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 277
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 2e-56
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 3e-46
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 5e-22
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 2e-20
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  183 bits (464), Expect = 2e-56
 Identities = 90/290 (31%), Positives = 136/290 (46%), Gaps = 16/290 (5%)

Query: 1   MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK 60
           MKA++ +D Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP    
Sbjct: 76  MKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAG 135

Query: 61  GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-EGLAPLNLYVEDEFHRATPGG 119
            SLY+RP+L+G+ P LG++        V   PVG YF    + P++L  +  F RA  GG
Sbjct: 136 TSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGG 195

Query: 120 AGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN----IIS 175
            G  K   NY P +     A  RG   VL+L   + +  E  +               + 
Sbjct: 196 VGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELV 255

Query: 176 TPATSGTILAGITRKSIIEIASDCG-FQVEERAIPVDELLEA------DEVFCTGTAVVV 228
           TP  +G IL G+ R+S++++A   G F+V ER I + +LL A       EVF +GTA  V
Sbjct: 256 TPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQV 315

Query: 229 APVGSITYRGKRIEFKTGAQ--SVSRELYSTLVGIQTGLIKDNKGWTVEI 276
            PV  I Y+ + +   T      +       L  IQ G       W   +
Sbjct: 316 CPVHRILYKDRNLHIPTMENGPELILRFQKELKEIQYG--IRAHEWMFPV 363
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query277
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-54  Score=382.82  Aligned_cols=260  Identities=29%  Similarity=0.482  Sum_probs=216.9

Q ss_pred             eEecCCC---cEeeeChhhHHHHHHHHHhhCCCCCC-CHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCCccc
Q 023788            3 AYRKEDG---QLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGL   78 (277)
Q Consensus         3 ~~rv~~G---~~~~f~l~~Hl~RL~~sa~~l~i~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ir~~~~g~~~~~~~   78 (277)
                      ++|+.+|   .+ +|+|++|++||.+||+.|+|+.| +.+++.+.+.+++++++.       ...++|+.+...++..++
T Consensus        35 t~r~~~g~~~~~-lf~l~~Hl~RL~~Sa~~l~i~~~~~~~~~~~~~~~~v~~n~~-------~~~~vr~~~~~~~~~~~~  106 (304)
T d1iyea_          35 GIRCYDSHKGPV-VFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNL-------TSAYIRPLIFVGDVGMGV  106 (304)
T ss_dssp             CEEEECCTTSSE-EETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHHHHTTC-------SSEEEEEEEEECSSCSSS
T ss_pred             cEEEEECCCCCe-ecCHHHHHHHHHHhcccccCCCcchhhHHHHHHHHHHHhccc-------ccceEEEEeeeccccccc
Confidence            3455454   44 68999999999999999999988 788888999999998874       355677666554445566


Q ss_pred             CCC--CCcEEEEEEEecCccccCC--CcCeEEEeeecccccCCC--CCCCCccccCcHHHHHHHHHHHhcCCCeEEEEcc
Q 023788           79 APA--PEYTFLVFASPVGNYFKEG--LAPLNLYVEDEFHRATPG--GAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDS  152 (277)
Q Consensus        79 ~~~--~~~~~~i~~~p~~~~~~~g--~~~i~l~~~~~~~r~~~~--~l~~~Kt~~~y~~~~~a~~ea~~~g~de~llld~  152 (277)
                      .++  ..+...+...|...+....  ..++.+.+. .+.|..|.  ++..+|++ ||+.++++.++|+++|+||+||+|+
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~~~r~~~~~~~~~~~k~~-n~~~~~~a~~~A~~~g~deal~ld~  184 (304)
T d1iyea_         107 NPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVS-SWNRAAPNTIPTAAKAGG-NYLSSLLVGSEARRHGYQEGIALDV  184 (304)
T ss_dssp             SCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEEC-SSCCCCTTTSCTTSCBGG-GHHHHHHHHHHHHHTTCSEEEEECT
T ss_pred             CCccccccceeeccccccccCChhhccCceEEEEe-eccccCCCCccccccccc-CccccchhhhHHHHcCCcceeeecc
Confidence            544  3566777777665432111  124555543 45666665  35677875 9999999999999999999999998


Q ss_pred             CCCCeEEeeCceeEEEEECCEEEccCCCCCcccchHHHHHHHHHHhCCCcEEEEecChhhHhcccEEEEecCCCceEEEE
Q 023788          153 VNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVG  232 (277)
Q Consensus       153 ~~~G~v~E~t~sNvf~v~~g~l~TP~l~~~~L~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfltns~~gi~pV~  232 (277)
                        +|+|+|+++|||||++||+|+|||++.++|+||||+.|+++|++.|++|+|++++++||.+|||+|+|||++||+||+
T Consensus       185 --~g~v~E~s~sNif~vk~~~l~TP~~~~~iL~GItR~~vi~~~~~~gi~v~e~~i~~~~L~~AdEvfltns~~gi~PV~  262 (304)
T d1iyea_         185 --NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVR  262 (304)
T ss_dssp             --TSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBTTHHHHCSEEEEEETTTEEEEEE
T ss_pred             --cCeEeecCceeEEEEeCCEEEEeecccccCCchHHHHHHHHhhhcccceeeccCCHHHHHhhCHHhhhCCCCeEEEEE
Confidence              799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeCCeEEeeCCCccHHHHHHHHHHHHhHhcCCCCCCCCceecC
Q 023788          233 SITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN  277 (277)
Q Consensus       233 ~i~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  277 (277)
                      +|+  ++.++ ++.+||+|++|+++|.+++.|+.+|+++|+++|+
T Consensus       263 ~id--~~~~~-~g~~Gpit~~L~~~~~~i~~g~~~~~~~W~~~v~  304 (304)
T d1iyea_         263 SVD--GIQVG-EGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN  304 (304)
T ss_dssp             EET--TEECT-TSSCCHHHHHHHHHHHGGGTTSSCCCSCCEEECC
T ss_pred             EEC--CEEcC-CCCcCHHHHHHHHHHHHHHcCCCCCCCCCCeECC
Confidence            995  88863 5578999999999999999999999999999986
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure