Citrus Sinensis ID: 023972

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
Protein Sequence
MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSKGQ
Secondary Structure (PSIPRED)
cEEEEccHHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHHHHccccccEEEEEEccccHHHHHHHcccEEEEEccccccccEEEccEEEEEEccccccccccccccccccccccccccEEEEEEEEEccccccccccccEEcccccccccccccccccEEEEEEEEccccEEEEEEEEcccccccccccEEEEEEcccccccccccEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHccHHHHccEEcccccccccccccHHHHHHHHcccccHHHEEEEEccHHHHHHHHHHccEEEEEccccccHHHHHHHHHHHHHHHcccHHHccccccccccccccccccEEEEEEcEccccccHHHHccccEEccHHHHHccccccccEEEEEEEEEcccccEEEEEEEEEccccccccEEEEEEEcccccccccccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcHHHHHcccccc
Coil and Loop (DISEMBL)
malasnshratieskisyqhgwnesFSVIVgsdevrtgkpspdIFLEAAKrlnmepssslviedsvIGVVAGKAAGMevvavpslpkqthrytAADEVINSLLdlrpekwglppfqdwiegtlpsepwyiggpvvkglgrgskvlgiptanlstegysdvlsehpsgvyfgwaglstrGVYKMVMSigwnpyfdnaektiepwllhefdedfydEELHLVIVGYirpeanfpsLETLIAKIHEDRKVAERALdlplyskyrddpylkitsskgq
Flexible Loop (DISEMBL)
malasnshratieskisyqhgwnESFSVIVGSDEVRTGKPSPDIFLEAAKRlnmepssslviEDSVIGVVAGKAAGMEVVAvpslpkqthrytAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAEraldlplyskyrddpylkitsskgq
Low Complexity Region (SEG)
MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSKGQ
Disordered region (IsUnstruct)
***************ISYQHGWNESFSVIVGS************FL*************LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYL********
Disordered Region (DISOPRED)
MALA***HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPY**I******
Disordered Region (DISEMBL)
**********TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSKGQ
Disordered Region (DISPRO)
****SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKIT*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSKGQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	274	2.2.26 [Sep-21-2011]
Q8CFV9	155	Riboflavin kinase OS=Mus	yes	no	0.547	0.967	0.466	7e-37
Q969G6	155	Riboflavin kinase OS=Homo	yes	no	0.532	0.941	0.465	4e-36
O76206	153	Putative riboflavin kinas	yes	no	0.547	0.980	0.460	2e-33
O74866	163	Riboflavin kinase OS=Schi	yes	no	0.514	0.865	0.478	3e-33
Q75DY2	186	Riboflavin kinase OS=Ashb	no	no	0.474	0.698	0.377	1e-25
A4QQ05	200	Riboflavin kinase OS=Magn	N/A	no	0.463	0.635	0.440	2e-24
P0C5D9	235	Riboflavin kinase OS=Chae	N/A	no	0.510	0.595	0.382	5e-23
A5DAH9	180	Riboflavin kinase OS=Meye	N/A	no	0.467	0.711	0.358	5e-23
Q6CT57	185	Riboflavin kinase OS=Kluy	yes	no	0.470	0.697	0.335	7e-23
A2QFH1	214	Riboflavin kinase OS=Aspe	yes	no	0.507	0.649	0.391	1e-21

>sp|Q8CFV9|RIFK_MOUSE Riboflavin kinase OS=Mus musculus GN=Rfk PE=2 SV=2

 Score =  154 bits (389), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 106/150 (70%)

Query: 123 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYK 182
           + S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+K
Sbjct: 1   MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHK 60

Query: 183 MVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIH 242
           MV+SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I 
Sbjct: 61  MVVSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQ 120

Query: 243 EDRKVAERALDLPLYSKYRDDPYLKITSSK 272
            D + A++ LDLP + K +DD + +++  K
Sbjct: 121 GDIEEAKKQLDLPEHLKLKDDNFFQVSKGK 150

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 2EC: 6

>sp|Q969G6|RIFK_HUMAN Riboflavin kinase OS=Homo sapiens GN=RFK PE=1 SV=2

 Score =  151 bits (382), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 105/146 (71%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 5   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 64

Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 65  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 124

Query: 247 VAERALDLPLYSKYRDDPYLKITSSK 272
            A++ L+LP + K ++D + +++ SK
Sbjct: 125 EAKKRLELPEHLKIKEDNFFQVSKSK 150

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|O76206|RIFK_DROME Putative riboflavin kinase OS=Drosophila melanogaster GN=anon-84Ea PE=2 SV=1

 Score =  142 bits (359), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 99/152 (65%), Gaps = 2/152 (1%)

Query: 123 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYK 182
           L   P + GG +V+G GRGSK LGIPTAN   E    +    P+G Y+GWA +    V+K
Sbjct: 2   LSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHK 61

Query: 183 MVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIH 242
           MV+SIGWNP+++N EK++E  +LH+F+ D Y + L + IVGY+RPE +F SLE+LIA I 
Sbjct: 62  MVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIR 121

Query: 243 EDRKVAERALDLPLYSKYRDDPYL--KITSSK 272
            D + A+  LD    +K ++ P+   K+ SSK
Sbjct: 122 GDIEQAKAFLDEADKAKLKEAPFFTEKLCSSK 153

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|O74866|RIFK_SCHPO Riboflavin kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmn1 PE=1 SV=1

 Score =  142 bits (357), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 1/142 (0%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P    G VV G GRGSK LGIPTAN+S +   ++L    SGVYFG+A +  R V+ MVMS
Sbjct: 23  PIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKR-VFPMVMS 81

Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           +GWNPY+ N  ++ E  L+    EDFY+E + ++++GYIRPE N+  L+ LI  IH D +
Sbjct: 82  VGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIR 141

Query: 247 VAERALDLPLYSKYRDDPYLKI 268
           VA  ++D P YS Y+ DP+ K+
Sbjct: 142 VALNSMDRPSYSSYKKDPFFKV 163

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q75DY2|RIFK_ASHGO Riboflavin kinase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=FMN1 PE=3 SV=2

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 29/159 (18%)

Query: 134 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL------------------ 175
           +V G GRGS  LGIPTAN+  E     ++E  +GVYFGWA L                  
Sbjct: 27  IVAGFGRGSAELGIPTANVPIEQLPSEVNEMATGVYFGWARLRPNMDQEAQVHHRNDGSE 86

Query: 176 -----------STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGY 224
                      + RGV+ +V+S+GWNP+++N++KT+E  +L++F+EDFY  ++    +GY
Sbjct: 87  VIYNFGSKLSETERGVFPIVLSVGWNPFYNNSKKTVELHILNDFEEDFYGAKIKFSFLGY 146

Query: 225 IRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 263
           IRPE N+ + E LI  IH D K+A   L    YS  ++ 
Sbjct: 147 IRPELNYTTKEALIEDIHTDIKIASEVLHTEPYSSLKNQ 185

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|A4QQ05|RIFK_MAGO7 Riboflavin kinase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=FMN1 PE=3 SV=3

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 86/143 (60%), Gaps = 16/143 (11%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEG-YSDVLSEHPSGVYFGWAGLSTRG------ 179
           P+ + G V+ G GRGSK LGIPTANL  +   S  +S   SGVY+GWA L          
Sbjct: 20  PYKMEGKVISGFGRGSKELGIPTANLPVDATISPWISSISSGVYYGWASLQLPPSHPESP 79

Query: 180 ---------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEAN 230
                    V+ MVMSIG+NP+++N E++ E  +LH+F  DFYD  + L+I+G+IR E N
Sbjct: 80  SSSSCSPYVVFPMVMSIGYNPFYNNTERSAEVHILHKFTADFYDAPMRLLILGFIRDEKN 139

Query: 231 FPSLETLIAKIHEDRKVAERALD 253
           + SLE L+  I+ D  VA  +LD
Sbjct: 140 YDSLEALVKDINTDCDVARTSLD 162

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|P0C5D9|RIFK_CHAGB Riboflavin kinase OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=FMN1 PE=3 SV=1

 Score =  108 bits (270), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 91/183 (49%), Gaps = 43/183 (23%)

Query: 113 PPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTE-GYSDVLSEHPSGVYFG 171
           PP      G  P  P+ + G V+ G GRGSK LGIPTANL  +   +  +S  PSGVYFG
Sbjct: 9   PPLIGDPSGPAPPYPFRMSGLVISGFGRGSKELGIPTANLPVDDAQTPWISSIPSGVYFG 68

Query: 172 WAGLS-------------------------------------TRG-----VYKMVMSIGW 189
           WA L+                                      RG     VY MVMSIG+
Sbjct: 69  WASLNLPASHPDSLTSSAAAAAAAAAAAAAPGEDGGGAGEQRQRGGNGFAVYPMVMSIGY 128

Query: 190 NPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAE 249
           NP++ N  ++ E  +LH F  DFY  E+ L+I G+IR E ++  LE LIA I  D +VA+
Sbjct: 129 NPFYKNTVRSAEVHVLHRFGADFYGVEMRLLIAGFIREEKDYSGLEALIADIEFDCEVAK 188

Query: 250 RAL 252
           R+L
Sbjct: 189 RSL 191

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) (taxid: 306901)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|A5DAH9|RIFK_PICGU Riboflavin kinase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=FMN1 PE=3 SV=2

 Score =  108 bits (270), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 31/159 (19%)

Query: 131 GGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG----------- 179
            G +  G GRGS  LGIPTAN+     +  L++  +G+Y+GW  L  R            
Sbjct: 22  AGTIESGFGRGSAELGIPTANIPV---TSELNKLETGIYYGWCRLVPRNQECAAKQRSDG 78

Query: 180 -----------------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIV 222
                             + M MSIGWNP+++N  KT E  ++H+F E+FY  +L   ++
Sbjct: 79  KKVYFNNGTKLADDELETFPMAMSIGWNPFYNNETKTAEVHIIHKFRENFYGADLRYAVM 138

Query: 223 GYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYR 261
           G+IRPE N+ + E LIA I++D ++ + AL  P Y KYR
Sbjct: 139 GHIRPELNYTTKEALIADINKDIEITKDALSKPSYEKYR 177

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (taxid: 294746)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q6CT57|RIFK_KLULA Riboflavin kinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=FMN1 PE=3 SV=1

 Score =  107 bits (268), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 29/158 (18%)

Query: 134 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTR--------------- 178
           V+ G GRGS  LGIPTAN+  +    ++ +  +GVYFGW  +                  
Sbjct: 26  VIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYFGWCKVRMAKDRDTKVEQRPDGRE 85

Query: 179 --------------GVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGY 224
                          V  +V+S+GWNP++ N  KT+E  ++H+F ++FY  ++    +GY
Sbjct: 86  VQYNNGTLLNDEDLAVLPVVLSVGWNPFYQNKNKTVELHIIHKFSDNFYGAQIKFNFLGY 145

Query: 225 IRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRD 262
           IRPE ++ + + LIA IH D ++A+  L LP Y K +D
Sbjct: 146 IRPELDYTTKDALIADIHTDIEIAKEKLQLPGYRKLKD 183

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|A2QFH1|RIFK_ASPNC Riboflavin kinase OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fmn1 PE=3 SV=1

 Score =  103 bits (257), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 88/171 (51%), Gaps = 32/171 (18%)

Query: 120 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS---GVYFGWAGL- 175
           EG     P  + GPV+KG GRGSK LGIPTAN+     +D LS+HP    GVY+G   L 
Sbjct: 15  EGPESPYPIRMSGPVIKGFGRGSKELGIPTANIP----ADELSQHPELSVGVYYGVVALD 70

Query: 176 -----STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE-------------------D 211
                +   V   V+SIG+NP++ N  K+IE  ++                        D
Sbjct: 71  PARFSTGETVLPAVLSIGYNPFYKNESKSIEIHIMPPLSAPSPTATTSTDGQVTFHKLPD 130

Query: 212 FYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRD 262
           FY   L+L+I+GYIRPE ++ S E LI  I  D +VA R+L  P Y  Y D
Sbjct: 131 FYGTPLNLLILGYIRPEYDYISSEALIEDIRVDCEVARRSLQRPAYRCYLD 181

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
255567401	382	riboflavin kinase/fmn adenylyltransferas	0.985	0.706	0.833	1e-130
359495472	388	PREDICTED: pseudouridine-5'-monophosphat	0.978	0.690	0.817	1e-128
224082356	382	predicted protein [Populus trichocarpa]	0.985	0.706	0.822	1e-126
356521303	377	PREDICTED: pseudouridine-5'-monophosphat	0.974	0.708	0.812	1e-126
224066785	381	predicted protein [Populus trichocarpa]	0.981	0.706	0.818	1e-126
359495493	388	PREDICTED: pseudouridine-5'-monophosphat	0.978	0.690	0.805	1e-126
449457696	386	PREDICTED: pseudouridine-5'-monophosphat	0.974	0.691	0.805	1e-125
297804002	380	ATFMN [Arabidopsis lyrata subsp. lyrata]	0.970	0.7	0.804	1e-124
42567011	379	riboflavin kinase [Arabidopsis thaliana]	0.970	0.701	0.796	1e-122
357475891	377	Riboflavin kinase [Medicago truncatula]	0.974	0.708	0.782	1e-122

>gi|255567401|ref|XP_002524680.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] gi|223536041|gb|EEF37699.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis]

 Score =  468 bits (1205), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/270 (83%), Positives = 247/270 (91%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           MALASNS RA IE+KIS   GW ESFS+I+G DEV+ GKPSP+IFLEAA+RLN+EPSS L
Sbjct: 112 MALASNSPRANIEAKISCHEGWKESFSIIIGGDEVKAGKPSPEIFLEAARRLNIEPSSCL 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDS+ GV+ GKAAGMEVVAVPS+PKQ+H YTAADEVINSLLDL+PEKWGLP F+DW+E
Sbjct: 172 VIEDSLPGVMGGKAAGMEVVAVPSIPKQSHLYTAADEVINSLLDLQPEKWGLPAFEDWVE 231

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
           GTLP EPW+IGGPVVKG GRGSKVLGIPTANLSTEGYS VLS+HPSGVYFGWA LSTRGV
Sbjct: 232 GTLPVEPWHIGGPVVKGFGRGSKVLGIPTANLSTEGYSAVLSQHPSGVYFGWAALSTRGV 291

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           YKMVMSIGWNPYF+N EKTIEPWLLHEF+EDFY EEL LVIVGYIRPEANFPSLE+L+AK
Sbjct: 292 YKMVMSIGWNPYFNNVEKTIEPWLLHEFEEDFYGEELRLVIVGYIRPEANFPSLESLVAK 351

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLKITS 270
           I EDRKVAE ALDLPLYSK+RDDPYLK +S
Sbjct: 352 IQEDRKVAEIALDLPLYSKFRDDPYLKGSS 381

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495472|ref|XP_003634998.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Vitis vinifera] gi|302144187|emb|CBI23314.3| unnamed protein product [Vitis vinifera]

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/268 (81%), Positives = 245/268 (91%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           MALASNS RA+IESKIS   GW ESFSVI+G DEVR GKPSP+IFLEA+KRL+++PS+ L
Sbjct: 112 MALASNSPRASIESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFLEASKRLSVKPSNCL 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDS+ GV+AGKAAGMEVVAVPS+PKQ+H + +ADEVINSLLDLRPE+WGLP FQDW+E
Sbjct: 172 VIEDSLPGVMAGKAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEQWGLPSFQDWVE 231

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
            TLP EPWYIGGPV+KG GRGSKVLG+PTANLSTEGYS +LSE  SGVYFGWAGLS +GV
Sbjct: 232 DTLPVEPWYIGGPVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGV 291

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           YKMVMSIGWNPYF+N EKTIEPWLLHEFDEDFY EELHLVIVGYIRPEANF SLE+LIAK
Sbjct: 292 YKMVMSIGWNPYFNNTEKTIEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAK 351

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLKI 268
           IHEDR++AERALDLPLYS ++DDPYLKI
Sbjct: 352 IHEDRRIAERALDLPLYSNFKDDPYLKI 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082356|ref|XP_002306660.1| predicted protein [Populus trichocarpa] gi|222856109|gb|EEE93656.1| predicted protein [Populus trichocarpa]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/270 (82%), Positives = 242/270 (89%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +ALASNS RA IESKISYQ GW ESFSVI+  DEVR GKPSP+IFLEAAKRLN+EPS  L
Sbjct: 112 LALASNSPRAYIESKISYQQGWKESFSVIIAGDEVRAGKPSPEIFLEAAKRLNIEPSRCL 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDS+ GV  GKAA MEVVAVPS+PKQTH Y AADEVI+SLLDL+PE WGLPPF DWI+
Sbjct: 172 VIEDSLPGVTGGKAADMEVVAVPSIPKQTHLYIAADEVISSLLDLQPELWGLPPFDDWID 231

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
           GTLP E W+IGGPVVKG GRGSKVLGIPTANLST+GYS +LSEHPSGVYFGWAGLSTRGV
Sbjct: 232 GTLPLEIWHIGGPVVKGFGRGSKVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSTRGV 291

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           YKMVMSIGWNPYF+N EKTIEPWLLHEFD DFY EEL LVIVGYIRPEANF +LE+LIAK
Sbjct: 292 YKMVMSIGWNPYFNNTEKTIEPWLLHEFDGDFYGEELRLVIVGYIRPEANFTTLESLIAK 351

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLKITS 270
           IHEDR++AERALD+PLY KY+DDPYLK +S
Sbjct: 352 IHEDRRIAERALDIPLYLKYKDDPYLKGSS 381

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521303|ref|XP_003529296.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max]

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/267 (81%), Positives = 241/267 (90%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           MALASNS R +IE+KISY  GW  SFSVI+G DEVRTGKPSP+IFLEAA+RLNMEPSS L
Sbjct: 109 MALASNSPRESIEAKISYHDGWKNSFSVIIGGDEVRTGKPSPEIFLEAARRLNMEPSSCL 168

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDS+ GV AGK A MEVV VPSLPKQ+H YTAADEVINSLLDLR EKWGLPPF+DW+E
Sbjct: 169 VIEDSLPGVTAGKTAEMEVVVVPSLPKQSHLYTAADEVINSLLDLRLEKWGLPPFEDWVE 228

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
           GTLP +PWYIGGPVVKG GRGSKVLGIPTANLSTEGYSD+LSE+P+GVYFGWAGLS RGV
Sbjct: 229 GTLPVDPWYIGGPVVKGFGRGSKVLGIPTANLSTEGYSDLLSEYPAGVYFGWAGLSARGV 288

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           +KMVMSIGWNPYF+N EK IEPWLLH+F+EDFY EEL LVIVGYIRPE NF SLE+L+AK
Sbjct: 289 FKMVMSIGWNPYFNNKEKAIEPWLLHDFNEDFYGEELRLVIVGYIRPEVNFSSLESLVAK 348

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLK 267
           IHEDR+VAERALDLPLYS +++D YL+
Sbjct: 349 IHEDRRVAERALDLPLYSSFKNDSYLR 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066785|ref|XP_002302214.1| predicted protein [Populus trichocarpa] gi|222843940|gb|EEE81487.1| predicted protein [Populus trichocarpa]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/270 (81%), Positives = 244/270 (90%), Gaps = 1/270 (0%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           MALASNS RA IESKISY  GW  SFSVI+  DEVRTGKPSP+IFLEAAKRLN++PSS L
Sbjct: 112 MALASNSPRANIESKISYHQGWKGSFSVIIAGDEVRTGKPSPEIFLEAAKRLNVKPSSCL 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDS+ GV  GKAAGMEVVAVPS+PK +H YT ADEVINSLLDL+PE WGLPPF+DW+E
Sbjct: 172 VIEDSLPGVTGGKAAGMEVVAVPSIPK-SHLYTEADEVINSLLDLQPELWGLPPFEDWME 230

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
           GTLP EPW+IGGPVVKG GRGSKVLGIPTANLST+GYS +LSEHPSGVYFGWAGLS++G+
Sbjct: 231 GTLPIEPWHIGGPVVKGFGRGSKVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSSQGL 290

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           YKMVMSIGWNPYF+N EKTIEPWLLHEFD DFY EEL LV+VGYIRPEANF SLE+LIAK
Sbjct: 291 YKMVMSIGWNPYFNNTEKTIEPWLLHEFDGDFYGEELRLVVVGYIRPEANFSSLESLIAK 350

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLKITS 270
           IHEDR++AERALD+P YSKYRDDPYLK +S
Sbjct: 351 IHEDRRIAERALDIPTYSKYRDDPYLKGSS 380

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495493|ref|XP_002271233.2| PREDICTED: pseudouridine-5'-monophosphatase [Vitis vinifera] gi|302144186|emb|CBI23313.3| unnamed protein product [Vitis vinifera]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 216/268 (80%), Positives = 242/268 (90%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +ALASNS RA+IESKIS   GW ESFSVI+G DEVR GKPSP+IF EA+KRL+++PS+ L
Sbjct: 112 IALASNSPRASIESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFFEASKRLSVKPSNCL 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDS+ GV+AGKAAGMEVVAVPS+P Q+H + +ADEVINSLLDLRPE WGLP FQDW+E
Sbjct: 172 VIEDSLPGVMAGKAAGMEVVAVPSIPNQSHIFNSADEVINSLLDLRPELWGLPSFQDWVE 231

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
            TLP EPWYIGGPV+KG GRGSKVLG+PTANLSTEGYS +LSE  SGVYFGWAGLS +GV
Sbjct: 232 DTLPVEPWYIGGPVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGV 291

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           YKMVMSIGWNPYF+N EKTIEPWLLHEFDEDFY EELHLVIVGYIRPEANF SLE+LIAK
Sbjct: 292 YKMVMSIGWNPYFNNTEKTIEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAK 351

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLKI 268
           IHEDR++AERALDLPLYS ++DDPYLKI
Sbjct: 352 IHEDRRIAERALDLPLYSNFKDDPYLKI 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457696|ref|XP_004146584.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus] gi|449488415|ref|XP_004158027.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/267 (80%), Positives = 242/267 (90%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +ALASNS R  IESKIS+  GW +SFSVI+GS+EV   KPSP+IFLE+AKRLN+EPSS L
Sbjct: 116 IALASNSSRENIESKISFHPGWKDSFSVIIGSNEVTAAKPSPEIFLESAKRLNLEPSSCL 175

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDSV GV AGKAAGM+VVAVPSLPK++H Y++ADEVINSLLD +P+KWGLPPF+DW+E
Sbjct: 176 VIEDSVPGVAAGKAAGMKVVAVPSLPKKSHLYSSADEVINSLLDFQPQKWGLPPFEDWVE 235

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
            TLP  P YIGGPVVKG GRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG+
Sbjct: 236 NTLPINPLYIGGPVVKGYGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGI 295

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           +KMVMSIGWNP+FDN EKTIEPWLLH+FD DFY E+L LV+VGYIRPEANFPSLE+LIAK
Sbjct: 296 FKMVMSIGWNPFFDNVEKTIEPWLLHDFDGDFYGEDLRLVVVGYIRPEANFPSLESLIAK 355

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLK 267
           IHED ++AERALDLPLYSKYR+D YLK
Sbjct: 356 IHEDGRIAERALDLPLYSKYRNDQYLK 382

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804002|ref|XP_002869885.1| ATFMN [Arabidopsis lyrata subsp. lyrata] gi|297315721|gb|EFH46144.1| ATFMN [Arabidopsis lyrata subsp. lyrata]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/266 (80%), Positives = 238/266 (89%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +ALASNS RA IESKIS+  GW E FSVIVGSDEV  GKPSPDIFLEAAKRLN +P+  L
Sbjct: 112 VALASNSSRANIESKISHHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLNKDPADCL 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDSV GV+AGKAAG  V+AVPSLPKQTH YT+ADEVINSLLD+RPEKWGLPPFQDWIE
Sbjct: 172 VIEDSVPGVMAGKAAGTNVIAVPSLPKQTHLYTSADEVINSLLDIRPEKWGLPPFQDWIE 231

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
            TLP +PW+IGGPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV
Sbjct: 232 NTLPIDPWHIGGPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGV 291

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           +KMVMSIGWNPYF+N EKTIEPWLLH+F EDFY EEL L+IVGYIRPEANF SLE+LIAK
Sbjct: 292 FKMVMSIGWNPYFNNKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAK 351

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYL 266
           IHEDR+VAE+ALDLP Y+K++DDPYL
Sbjct: 352 IHEDREVAEKALDLPSYAKFKDDPYL 377

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567011|ref|NP_193878.2| riboflavin kinase [Arabidopsis thaliana] gi|30102526|gb|AAP21181.1| At4g21470 [Arabidopsis thaliana] gi|62752481|gb|AAX98488.1| riboflavin kinase/FMN hydrolase [Arabidopsis thaliana] gi|110742726|dbj|BAE99274.1| hypothetical protein [Arabidopsis thaliana] gi|332659057|gb|AEE84457.1| riboflavin kinase [Arabidopsis thaliana]

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/266 (79%), Positives = 236/266 (88%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +ALASNS RA IESKISY  GW E FSVIVGSDEV  GKPSPDIFLEAAKRL  +P+  L
Sbjct: 112 VALASNSSRANIESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCL 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDSV GV+AGKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQDWIE
Sbjct: 172 VIEDSVPGVMAGKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIE 231

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
            TLP +PW+IGGPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV
Sbjct: 232 NTLPIDPWHIGGPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGV 291

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           +KMVMSIGWNPYF+N EKTIEPWLLH+F EDFY EEL L+IVGYIRPEANF SLE+LIAK
Sbjct: 292 FKMVMSIGWNPYFNNKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAK 351

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYL 266
           IHEDR+VAE+ALDLP Y+K++ DPYL
Sbjct: 352 IHEDREVAEKALDLPSYAKFKGDPYL 377

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475891|ref|XP_003608231.1| Riboflavin kinase [Medicago truncatula] gi|217072412|gb|ACJ84566.1| unknown [Medicago truncatula] gi|355509286|gb|AES90428.1| Riboflavin kinase [Medicago truncatula] gi|388509552|gb|AFK42842.1| unknown [Medicago truncatula]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/267 (78%), Positives = 239/267 (89%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           MALASNS R +I++KIS+  GW +SFSVI+G DEVRTGKPSPDIF EAA+RL +EPSS L
Sbjct: 109 MALASNSPRESIDAKISFHDGWKDSFSVIIGGDEVRTGKPSPDIFFEAARRLKIEPSSCL 168

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDS+ GV AGKAA MEVVAVPSLPKQ+H +TAADEVINSLLDL+ EKWGLPPF DW+E
Sbjct: 169 VIEDSLPGVTAGKAAEMEVVAVPSLPKQSHLFTAADEVINSLLDLQLEKWGLPPFADWVE 228

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
            TLP +PWYIGGPV+KG GRGSKVLGIPTANLST+ YSD+L+EHP+GVYFGWAGLS RG+
Sbjct: 229 RTLPVDPWYIGGPVIKGFGRGSKVLGIPTANLSTKDYSDLLAEHPAGVYFGWAGLSGRGI 288

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           +KMVMSIGWNPYF+N EKTIEPWLLHEF EDFY EEL LVIVGYIRPE NFP+LE+LIAK
Sbjct: 289 FKMVMSIGWNPYFNNKEKTIEPWLLHEFTEDFYGEELKLVIVGYIRPEVNFPTLESLIAK 348

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLK 267
           IHEDR+VAE AL+LP+YS ++DD YL+
Sbjct: 349 IHEDRRVAESALELPMYSSHKDDSYLR 375

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
TAIR|locus:2119647	379	FMN/FHY "riboflavin kinase/FMN	0.970	0.701	0.796	2.4e-115
UNIPROTKB|F1SJ99	162	RFK "Uncharacterized protein"	0.554	0.938	0.460	5.7e-36
RGD|1549748	155	Rfk "riboflavin kinase" [Rattu	0.540	0.954	0.479	7.2e-36
RGD|1563242	155	RGD1563242 "similar to ribofla	0.540	0.954	0.479	7.2e-36
UNIPROTKB|Q3SZP4	234	RFK "Uncharacterized protein"	0.605	0.709	0.433	1.2e-35
UNIPROTKB|J9NSA8	384	RFK "Uncharacterized protein"	0.554	0.395	0.453	1.2e-35
MGI|MGI:1914688	155	Rfk "riboflavin kinase" [Mus m	0.540	0.954	0.472	1.5e-35
UNIPROTKB|F1NU60	168	LOC427259 "Uncharacterized pro	0.562	0.916	0.467	1.9e-35
UNIPROTKB|J9P4I1	206	RFK "Uncharacterized protein"	0.532	0.708	0.465	1.9e-35
UNIPROTKB|Q969G6	155	RFK "Riboflavin kinase" [Homo	0.532	0.941	0.465	4e-35

TAIR|locus:2119647 FMN/FHY "riboflavin kinase/FMN hydrolase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1137 (405.3 bits), Expect = 2.4e-115, P = 2.4e-115
 Identities = 212/266 (79%), Positives = 236/266 (88%)

Query:     1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
             +ALASNS RA IESKISY  GW E FSVIVGSDEV  GKPSPDIFLEAAKRL  +P+  L
Sbjct:   112 VALASNSSRANIESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCL 171

Query:    61 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
             VIEDSV GV+AGKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQDWIE
Sbjct:   172 VIEDSVPGVMAGKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIE 231

Query:   121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
              TLP +PW+IGGPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV
Sbjct:   232 NTLPIDPWHIGGPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGV 291

Query:   181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
             +KMVMSIGWNPYF+N EKTIEPWLLH+F EDFY EEL L+IVGYIRPEANF SLE+LIAK
Sbjct:   292 FKMVMSIGWNPYFNNKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAK 351

Query:   241 IHEDRKVAERALDLPLYSKYRDDPYL 266
             IHEDR+VAE+ALDLP Y+K++ DPYL
Sbjct:   352 IHEDREVAEKALDLPSYAKFKGDPYL 377

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA;ISS;IDA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0003919 "FMN adenylyltransferase activity" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|F1SJ99 RFK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 70/152 (46%), Positives = 108/152 (71%)

Query:   121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
             G + + P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V
Sbjct:     6 GVMRNLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDV 65

Query:   181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
             +KMV+SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ 
Sbjct:    66 HKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISA 125

Query:   241 IHEDRKVAERALDLPLYSKYRDDPYLKITSSK 272
             I  D + A++ LDLP + K ++D + +++ SK
Sbjct:   126 IQGDIEEAKKQLDLPEHLKLKEDNFFQVSKSK 157

GO:0005739 "mitochondrion" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

RGD|1549748 Rfk "riboflavin kinase" [Rattus norvegicus (taxid:10116)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 71/148 (47%), Positives = 106/148 (71%)

Query:   125 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 184
             S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV
Sbjct:     3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHKMV 62

Query:   185 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 244
             +SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D
Sbjct:    63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122

Query:   245 RKVAERALDLPLYSKYRDDPYLKITSSK 272
              + A++ LDLP + K +DD + +++ SK
Sbjct:   123 IEEAKKQLDLPEHLKLKDDNFFQVSKSK 150

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0008531 "riboflavin kinase activity" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

RGD|1563242 RGD1563242 "similar to riboflavin kinase" [Rattus norvegicus (taxid:10116)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 71/148 (47%), Positives = 106/148 (71%)

Query:   125 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 184
             S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV
Sbjct:     3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHKMV 62

Query:   185 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 244
             +SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D
Sbjct:    63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122

Query:   245 RKVAERALDLPLYSKYRDDPYLKITSSK 272
              + A++ LDLP + K +DD + +++ SK
Sbjct:   123 IEEAKKQLDLPEHLKLKDDNFFQVSKSK 150

GO:0005739 "mitochondrion" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

UNIPROTKB|Q3SZP4 RFK "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 72/166 (43%), Positives = 108/166 (65%)

Query:   107 PEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS 166
             P+    P  +   +G +   P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +
Sbjct:    64 PDSRSGPQPEPEADGVMRQLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADIST 123

Query:   167 GVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIR 226
             G+Y+GWA +    V+KMV+SIGWNPY+ N +K++E  ++H F EDFY E L + IVGY+R
Sbjct:   124 GIYYGWASVGNGDVHKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEILKVAIVGYLR 183

Query:   227 PEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSK 272
             PE NF SLE LI+ I  D + A++ LDLP + K ++D + ++  SK
Sbjct:   184 PEKNFDSLEALISAIQGDIEEAKKRLDLPEHLKLKEDKFFQVPKSK 229

GO:0005739 "mitochondrion" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

UNIPROTKB|J9NSA8 RFK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 69/152 (45%), Positives = 107/152 (70%)

Query:   121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
             G +   P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V
Sbjct:   228 GVMRHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDV 287

Query:   181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
             +KMV+SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ 
Sbjct:   288 HKMVVSIGWNPYYKNTKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISA 347

Query:   241 IHEDRKVAERALDLPLYSKYRDDPYLKITSSK 272
             I  D + A++ LDLP + K+++D + ++  +K
Sbjct:   348 IQGDIEEAKKRLDLPEHLKFKEDNFFQVPKNK 379

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

MGI|MGI:1914688 Rfk "riboflavin kinase" [Mus musculus (taxid:10090)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 70/148 (47%), Positives = 105/148 (70%)

Query:   125 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 184
             S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV
Sbjct:     3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHKMV 62

Query:   185 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 244
             +SIGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D
Sbjct:    63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122

Query:   245 RKVAERALDLPLYSKYRDDPYLKITSSK 272
              + A++ LDLP + K +DD + +++  K
Sbjct:   123 IEEAKKQLDLPEHLKLKDDNFFQVSKGK 150

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0008531 "riboflavin kinase activity" evidence=ISA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=ISA

GO:0016740 "transferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NU60 LOC427259 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 72/154 (46%), Positives = 102/154 (66%)

Query:   110 WGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVY 169
             W LP  +      +   P++  G VVKG GRGS+ LG+PTAN S +      S+ P+G+Y
Sbjct:     3 WTLPAMRGRCAAAVRYLPYFCRGEVVKGFGRGSRELGVPTANFSEQVVESFPSDIPTGIY 62

Query:   170 FGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEA 229
             +GWA +    V+KMV+SIGWNP++ N +K++E  +++ F EDFY E L +VI GYIR E 
Sbjct:    63 YGWASVGNGDVHKMVLSIGWNPFYKNIKKSVETHIINTFKEDFYGEILSIVITGYIRSEK 122

Query:   230 NFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 263
             NF SLETL++ I ED + A+R LDLP + K +D+
Sbjct:   123 NFNSLETLVSAIREDIEEAKRQLDLPEHLKLKDN 156

GO:0008531 "riboflavin kinase activity" evidence=IEA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

UNIPROTKB|J9P4I1 RFK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 68/146 (46%), Positives = 105/146 (71%)

Query:   127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
             P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct:    57 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHKMVVS 116

Query:   187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
             IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct:   117 IGWNPYYKNTKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 176

Query:   247 VAERALDLPLYSKYRDDPYLKITSSK 272
              A++ LDLP + K+++D + ++  +K
Sbjct:   177 EAKKRLDLPEHLKFKEDNFFQVPKNK 202

GO:0009231 "riboflavin biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA

UNIPROTKB|Q969G6 RFK "Riboflavin kinase" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 68/146 (46%), Positives = 105/146 (71%)

Query:   127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
             P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct:     5 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 64

Query:   187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
             IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct:    65 IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 124

Query:   247 VAERALDLPLYSKYRDDPYLKITSSK 272
              A++ L+LP + K ++D + +++ SK
Sbjct:   125 EAKKRLELPEHLKIKEDNFFQVSKSK 150

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009398 "FMN biosynthetic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=NAS;TAS

GO:0009231 "riboflavin biosynthetic process" evidence=NAS

GO:0005737 "cytoplasm" evidence=NAS

GO:0005829 "cytosol" evidence=TAS

GO:0006766 "vitamin metabolic process" evidence=TAS

GO:0006767 "water-soluble vitamin metabolic process" evidence=TAS

GO:0006771 "riboflavin metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.7	LOW CONFIDENCE prediction!
3rd Layer	2.7.1	LOW CONFIDENCE prediction!
4th Layer	2.7.1.26	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_V0054	riboflavin kinase (EC-2.7.1.26) (383 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.142.26.1	SubName- Full=Putative uncharacterized protein; (231 aa)						•			0.899
	gw1.120.130.1	riboflavin synthase (EC-2.5.1.9) (205 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	274
PLN02940	382	PLN02940, PLN02940, riboflavin kinase	0.0
pfam01687	125	pfam01687, Flavokinase, Riboflavin kinase	1e-41
smart00904	124	smart00904, Flavokinase, Riboflavin kinase	6e-40
PLN02811	220	PLN02811, PLN02811, hydrolase	1e-31
COG0196	304	COG0196, RibF, FAD synthase [Coenzyme metabolism]	1e-28
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	3e-24
PRK05627	305	PRK05627, PRK05627, bifunctional riboflavin kinase	1e-21
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	2e-17
TIGR01990	185	TIGR01990, bPGM, beta-phosphoglucomutase	5e-16
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	2e-15
TIGR00083	288	TIGR00083, ribF, riboflavin kinase/FMN adenylyltra	2e-15
PRK10826	222	PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase;	5e-15
PLN02779	286	PLN02779, PLN02779, haloacid dehalogenase-like hyd	4e-14
PRK10725	188	PRK10725, PRK10725, fructose-1-P/6-phosphogluconat	6e-13
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	2e-12
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	3e-12
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	3e-12
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	3e-12
PRK11587	218	PRK11587, PRK11587, putative phosphatase; Provisio	5e-12
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	1e-11
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	2e-11
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	2e-10
PLN02575	381	PLN02575, PLN02575, haloacid dehalogenase-like hyd	4e-10
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	1e-09
TIGR01449	213	TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas	4e-09
PLN02770	248	PLN02770, PLN02770, haloacid dehalogenase-like hyd	1e-08
TIGR01454	205	TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic	2e-07
PLN03243	260	PLN03243, PLN03243, haloacid dehalogenase-like hyd	3e-07
PRK13226	229	PRK13226, PRK13226, phosphoglycolate phosphatase;	6e-07
PRK13288	214	PRK13288, PRK13288, pyrophosphatase PpaX; Provisio	1e-06
TIGR00213	176	TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate	5e-06
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	5e-06
TIGR01656	147	TIGR01656, Histidinol-ppas, histidinol-phosphate p	3e-05
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	6e-05
COG0241	181	COG0241, HisB, Histidinol phosphatase and related	1e-04
PRK10563	221	PRK10563, PRK10563, 6-phosphogluconate phosphatase	2e-04
PRK13223	272	PRK13223, PRK13223, phosphoglycolate phosphatase;	3e-04
TIGR01458	257	TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam	3e-04
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	6e-04
TIGR01422	253	TIGR01422, phosphonatase, phosphonoacetaldehyde hy	6e-04
PRK08942	181	PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p	7e-04
TIGR02252	203	TIGR02252, DREG-2, REG-2-like, HAD superfamily (su	0.001
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	0.002
PRK13478	267	PRK13478, PRK13478, phosphonoacetaldehyde hydrolas	0.002

>gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase

 Score =  532 bits (1372), Expect = 0.0
 Identities = 226/267 (84%), Positives = 246/267 (92%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           MALASNS RA IE+KIS   GW ESFSVIVG DEV  GKPSPDIFLEAAKRLN+EPS+ L
Sbjct: 112 MALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCL 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 120
           VIEDS+ GV+AGKAAGMEV+AVPS+PKQTH Y++ADEVINSLLDL+PEKWGLPPF DWIE
Sbjct: 172 VIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIE 231

Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 180
           GTLP EPW+IGGPV+KG GRGSKVLGIPTANLSTE YSDVLSEHPSGVYFGWAGLSTRGV
Sbjct: 232 GTLPIEPWHIGGPVIKGFGRGSKVLGIPTANLSTENYSDVLSEHPSGVYFGWAGLSTRGV 291

Query: 181 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240
           YKMVMSIGWNPYF+N EKTIEPWLLH+F EDFY EEL LVIVGYIRPEANFPSLE+LIAK
Sbjct: 292 YKMVMSIGWNPYFNNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIAK 351

Query: 241 IHEDRKVAERALDLPLYSKYRDDPYLK 267
           IHEDR++AE+ALDLPLY+KY+DDPYL 
Sbjct: 352 IHEDRRIAEKALDLPLYAKYKDDPYLT 378

Length = 382

>gnl|CDD|190069 pfam01687, Flavokinase, Riboflavin kinase

 Score =  138 bits (351), Expect = 1e-41
 Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 6/126 (4%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P+ I G VV G GRG   LG PTANLS      +     +GVY     +  + VY  V +
Sbjct: 5   PYSISGTVVHGKGRGRT-LGFPTANLSLPKDKLL---PKNGVYAVRVKIDGK-VYPGVAN 59

Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           IG+NP F   + TIE  +L +FD D Y EE+ +  + ++RPE  F SLE L A+I +D +
Sbjct: 60  IGYNPTFGGKKPTIEVHIL-DFDGDLYGEEIRVEFLKFLRPEKKFDSLEELKAQIKKDIE 118

Query: 247 VAERAL 252
            A + L
Sbjct: 119 QARKIL 124

This family represents the C-terminal region of the bifunctional riboflavin biosynthesis protein known as RibC in Bacillus subtilis. The RibC protein from Bacillus subtilis has both flavokinase and flavin adenine dinucleotide synthetase (FAD-synthetase) activities. RibC plays an essential role in the flavin metabolism. This domain is thought to have kinase activity. Length = 125

>gnl|CDD|214901 smart00904, Flavokinase, Riboflavin kinase

 Score =  134 bits (340), Expect = 6e-40
 Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 7/127 (5%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P+ I G VV G  RG   LG PTANL  +    +     +GVY     +    +Y  V +
Sbjct: 5   PYSISGRVVHGDKRGRT-LGFPTANLPLDDRLLLP---KNGVYAVRVRV-DGKIYPGVAN 59

Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           IG  P F   ++++E  +L  F  D Y EE+ +  + +IR E  F SL+ L A+I  D +
Sbjct: 60  IGTRPTFGG-DRSVEVHILD-FSGDLYGEEIEVEFLKFIRDEQKFDSLDELKAQISRDIE 117

Query: 247 VAERALD 253
            A   L 
Sbjct: 118 EAREYLA 124

Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase, which converts it into FMN, and FAD synthetase, which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme. the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases. This entry represents riboflavin kinase, which occurs as part of a bifunctional enzyme or a stand-alone enzyme. Length = 124

>gnl|CDD|178407 PLN02811, PLN02811, hydrolase

 Score =  116 bits (292), Expect = 1e-31
 Identities = 60/127 (47%), Positives = 79/127 (62%), Gaps = 15/127 (11%)

Query: 1   MALASNSHRATIESKISYQHGWNESFS----VIVGSD-EVRTGKPSPDIFLEAAKRL--- 52
           +A+A+ SH+   + K   +HG  E FS    V+ G D EV+ GKP+PDIFL AA+R    
Sbjct: 97  IAIATGSHKRHFDLKTQ-RHG--ELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153

Query: 53  NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRPEKW 110
            ++P   LV ED+  GV A K AGM VV VP   L K   +   AD+V++SLLD +PE+W
Sbjct: 154 PVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCK--GADQVLSSLLDFKPEEW 211

Query: 111 GLPPFQD 117
           GLPPF D
Sbjct: 212 GLPPFPD 218

Length = 220

>gnl|CDD|223274 COG0196, RibF, FAD synthase [Coenzyme metabolism]

 Score =  110 bits (278), Expect = 1e-28
 Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P+ I G VV G   G   LG PTAN+  +           GVY     L   GVY  V +
Sbjct: 185 PYSIEGKVVHGQKLGRT-LGFPTANIYLKDNVLP----AFGVYAVRVKL-DGGVYPGVAN 238

Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           +G+ P  D +E+++E  +L  F+ D Y E + +  + +IR E  F SL+ L  +I +D  
Sbjct: 239 VGYRPTVDGSERSLEVHILD-FNGDLYGERVKVRFLKFIRDEKKFDSLDELKEQIEKD-- 295

Query: 247 VAERALDL 254
             ERA  L
Sbjct: 296 -IERARKL 302

Length = 304

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 97.1 bits (242), Expect = 3e-24
 Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 1/108 (0%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +A+AS+S R   E ++  + G  + F VIV +D+V  GKP+PDI+L AA+RL ++P   +
Sbjct: 105 LAVASSSPRRAAE-RVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 108
           V+EDS  G+ A KAAGM VV VP+   + H         +++L    E
Sbjct: 164 VVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAE 211

Length = 221

>gnl|CDD|235536 PRK05627, PRK05627, bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed

 Score = 91.4 bits (228), Expect = 1e-21
 Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 9/124 (7%)

Query: 130 IGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVMSIG 188
           I G VV G   G   LG PTANL            P  GVY     +  +  Y  V +IG
Sbjct: 188 ISGRVVHGQKLGRT-LGFPTANLPLPDRV-----LPADGVYAVRVKVDGK-PYPGVANIG 240

Query: 189 WNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVA 248
             P  D   + +E  LL +F+ D Y E + +  +  +R E  F SL+ L A+I +D + A
Sbjct: 241 TRPTVDGGRQLLEVHLL-DFNGDLYGEHITVEFLKKLRDEQKFDSLDELKAQIAKDIETA 299

Query: 249 ERAL 252
              L
Sbjct: 300 RAFL 303

Length = 305

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score = 77.8 bits (192), Expect = 2e-17
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 5/82 (6%)

Query: 2   ALASNSHRA-TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
            L S+S  A  I +K+    G  + F  IV + EV+ GKP P+ FL AA+ L + P+  +
Sbjct: 108 GLGSSSKNAPRILAKL----GLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPNECI 163

Query: 61  VIEDSVIGVVAGKAAGMEVVAV 82
           V ED++ GV A +AAGM  VAV
Sbjct: 164 VFEDALAGVQAARAAGMFAVAV 185

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase

 Score = 73.9 bits (182), Expect = 5e-16
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%)

Query: 2   ALASNSHRA-TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           ALAS S  A TI  K+       + F  IV   E++ GKP P+IFL AA+ L + PS  +
Sbjct: 107 ALASASKNAPTILEKL----ELIDYFDAIVDPAELKKGKPDPEIFLAAAEGLGVSPSECI 162

Query: 61  VIEDSVIGVVAGKAAGMEVVAV 82
            IED+  G+ A KAAGM  V V
Sbjct: 163 GIEDAQAGIEAIKAAGMFAVGV 184

This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 72.1 bits (177), Expect = 2e-15
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +AL +NS RA  +  +    G    F V++ S +V  GKP PDI+L+A K+L ++PS  L
Sbjct: 98  LALLTNSPRADAKLVLE--LGLRALFDVVIDSSDVGLGKPDPDIYLQALKKLGLKPSECL 155

Query: 61  VIEDSVIGVVAGKAAGMEVVAV 82
            ++DS  G+ A KAAGM  V V
Sbjct: 156 FVDDSPAGIDAAKAAGMHTVLV 177

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|232818 TIGR00083, ribF, riboflavin kinase/FMN adenylyltransferase

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 6/127 (4%)

Query: 126 EPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVM 185
            P++I G V+ G   G   LG PTAN+  +     L     G Y     L+    Y  V 
Sbjct: 167 RPYFICGTVIHGQKLGRT-LGFPTANIKLKNQVLPL---KGGYYVVVVLLNGE-PYPGVG 221

Query: 186 SIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDR 245
           +IG  P F   +  IE  LL +F  + Y +E+ + +V  IRPE  F SL+ L  +I +D 
Sbjct: 222 NIGNRPTFIGQQLVIEVHLL-DFSGELYGQEIKVTLVKKIRPEQKFSSLDELKNQIQQDI 280

Query: 246 KVAERAL 252
             A++  
Sbjct: 281 LQAKKWF 287

multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase) [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD]. Length = 288

>gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional

 Score = 71.9 bits (177), Expect = 5e-15
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 4/108 (3%)

Query: 3   LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 62
           LAS S    +E  +       + F  +  ++++   KP P+++L  A +L ++P + + +
Sbjct: 113 LASASPLHMLE-AVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVAL 171

Query: 63  EDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDLRPE 108
           EDS  G++A KAA M  + VP+ P+Q +  R+  AD  + SL +L   
Sbjct: 172 EDSFNGMIAAKAARMRSIVVPA-PEQQNDPRWALADVKLESLTELTAA 218

Length = 222

>gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein

 Score = 70.5 bits (173), Expect = 4e-14
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 1/89 (1%)

Query: 24  ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 83
           +   V  G D+V   KP PDI+  AA+ L ++PS  +V+EDSVIG+ A KAAGM  +   
Sbjct: 188 QGLDVFAG-DDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTK 246

Query: 84  SLPKQTHRYTAADEVINSLLDLRPEKWGL 112
           S       ++ AD V + L D+  E + L
Sbjct: 247 SSYTADEDFSGADAVFDCLGDVPLEDFDL 275

Length = 286

>gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional

 Score = 65.5 bits (160), Expect = 6e-13
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 1   MALASNSHRATIESKISYQH-GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           MA+ + S  A  E+ +   H G    F  +V +D+V+  KP+PD FL  A+ + ++P+  
Sbjct: 105 MAVGTGSESAIAEALL--AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVPSL 85
           +V ED+  G+ A +AAGM+ V V  L
Sbjct: 163 VVFEDADFGIQAARAAGMDAVDVRLL 188

Length = 188

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + +N  R   E K+  Q G  + F  +  S++V   KP P+IF  A ++L + P  +L
Sbjct: 117 LGILTNGARPHQERKLR-QLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175

Query: 61  VIEDSVIGVVAG-KAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL 105
            + DS+   + G +A GM+ V +    K       A D  I+SL +L
Sbjct: 176 FVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222

Length = 229

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + SN  R  +E  +    G  + F  +  SD+V   KP P+ +    +RL + P   L
Sbjct: 96  LVILSNGSREAVERLLEK-LGLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEIL 154

Query: 61  VIEDSVIGVVAGKAAGMEVVAV 82
            I+DS   + A +AAG++ V V
Sbjct: 155 FIDDSPEDLEAARAAGIKTVHV 176

Length = 176

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 66.0 bits (161), Expect = 3e-12
 Identities = 33/82 (40%), Positives = 50/82 (60%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +A+AS++ R  +++ ++        F  IV +D     KP+PDIFL AAK L +  S  +
Sbjct: 180 VAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239

Query: 61  VIEDSVIGVVAGKAAGMEVVAV 82
           VIED++ GV A +AAGM  +AV
Sbjct: 240 VIEDALAGVQAARAAGMRCIAV 261

Length = 1057

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 64.1 bits (157), Expect = 3e-12
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 14/98 (14%)

Query: 19  QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78
             G  + FSV++G D +   KP P   L A ++L ++P   L + DS   + A +AAG  
Sbjct: 129 ALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCP 188

Query: 79  VVAVPSLPKQTHRYT--------AADEVINSLLDLRPE 108
            V V      T+ Y           D VI+   +L P 
Sbjct: 189 SVGV------TYGYNYGEPIALSEPDVVIDHFAELLPL 220

Length = 226

>gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional

 Score = 63.5 bits (155), Expect = 5e-12
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 87
           V V ++ V+ GKP PD +L  A+ L + P   +V+ED+  GV++G AAG  V+AV + P 
Sbjct: 127 VFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-NAPA 185

Query: 88  QTHRYTAADEVINSLLDLRPEK 109
            T R    D V++SL  L   K
Sbjct: 186 DTPRLDEVDLVLHSLEQLTVTK 207

Length = 218

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 62.5 bits (152), Expect = 1e-11
 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + +N     ++  +    G  + F VIVG D+V   KP P+  L   ++L ++P  +L
Sbjct: 108 LGIVTNKPERELD-ILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166

Query: 61  VIEDSVIGVVAGKAAGMEVVAV------PSLPKQTHRYTAADEVINSLLDLRP 107
           ++ DS+  ++A KAAG+  V V           Q      AD VI+SL +L  
Sbjct: 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAG----ADVVIDSLAELLA 215

Length = 220

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 14/77 (18%)

Query: 38  GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--- 94
           GKP+P +   A +RL ++P   ++I DS   ++A +AAG+  + V      T   TA   
Sbjct: 3   GKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVL-----TGVTTAEDL 57

Query: 95  ------ADEVINSLLDL 105
                  D V++SL DL
Sbjct: 58  ERAPGRPDYVVDSLADL 74

Length = 74

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 17/98 (17%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------RTGKPSPDI 44
           +ALA+N  R  +   +  + G ++ F  ++ S+                    GKP+PD 
Sbjct: 43  LALATNKSRREVLELLE-ELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDK 101

Query: 45  FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82
            L A K L ++P   L++ DS+  +   KAAG   VAV
Sbjct: 102 LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase

 Score = 59.5 bits (144), Expect = 4e-10
 Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           MAL S   R T+E+ I    G    FSVIV +++V  GKP P++F+ AA+ LN  P   +
Sbjct: 235 MALVSTRPRKTLENAIG-SIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           V  +S   V A   A M+ VAV S     +   AAD V+  L +L
Sbjct: 294 VFGNSNQTVEAAHDARMKCVAVAS-KHPIYELGAADLVVRRLDEL 337

Length = 381

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 56.1 bits (135), Expect = 1e-09
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 7/79 (8%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT---GKPSPDIFLEAAKRLNMEPS 57
           +A+ +  +R T  +           F  +V +D       GKP P IF  A + L ++P 
Sbjct: 113 LAILTGDNRLTANAIARLLG----LFDALVSADLYGLVGVGKPDPKIFELALEELGVKPE 168

Query: 58  SSLVIEDSVIGVVAGKAAG 76
             L++ D V  + A KAAG
Sbjct: 169 EVLMVGDGVNDIPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 21  GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80
           G  + FSV++G D +   KP PD  L AA+RL + P   + + DS + + A +AAG   V
Sbjct: 123 GLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSV 182

Query: 81  AV 82
            +
Sbjct: 183 LL 184

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213

>gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 2   ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 61
           A  +N+ R   E  IS   G ++ F  ++   E    KP PD +L+A + L +    + V
Sbjct: 128 AAVTNAPRENAELMISLL-GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFV 186

Query: 62  IEDSVIGVVAGKAAGMEVVAV 82
            EDSV G+ AG AAGM VV +
Sbjct: 187 FEDSVSGIKAGVAAGMPVVGL 207

Length = 248

>gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 21  GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80
           G    F  ++GSDEV   KP+PDI  EA + L++ P  ++++ D+V  + + +AAG   V
Sbjct: 113 GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATV 172

Query: 81  A 81
           A
Sbjct: 173 A 173

The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205

>gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional

 Score = 50.0 bits (119), Expect = 3e-07
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 2/105 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +A+AS   R  +E  I    G    FSV++ +++V  GKP P++F+ AA+RL   P   +
Sbjct: 128 IAVASTRPRRYLERAIE-AVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           V  +S   V A     M+ VAV       +  +A D V+  L DL
Sbjct: 187 VFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRRLDDL 230

Length = 260

>gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional

 Score = 48.7 bits (116), Expect = 6e-07
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 19  QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78
           Q GW +  +V++G D +   KP P   L AA+R+ + P+  + + D    ++A +AAGM 
Sbjct: 131 QLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMP 190

Query: 79  VVAV 82
            VA 
Sbjct: 191 SVAA 194

Length = 229

>gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 21  GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80
           G +E F V++  D+V   KP P+  L+A + L  +P  +L++ D+   ++AGK AG +  
Sbjct: 120 GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTA 179

Query: 81  AV 82
            V
Sbjct: 180 GV 181

Length = 214

>gnl|CDD|129317 TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate phosphatase

 Score = 45.7 bits (108), Expect = 5e-06
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAAD 96
           KP P + L+A K L+++ + S ++ D +  + AG AA     V+     P        AD
Sbjct: 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIAD 165

Query: 97  EVINSLLDL 105
            V+NSL DL
Sbjct: 166 WVLNSLADL 174

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PMID:11751812) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 176

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 26  FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPS 84
           F  ++ S+E    KP P IF  A KRL ++P  ++++ D +   +   K  GM+ V +  
Sbjct: 137 FDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196

Query: 85  LPKQTHR---YTAADEVINSLLDL 105
                     Y   D  I+SL +L
Sbjct: 197 GKSSKMEDDVYPYPDYEISSLREL 220

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 84
           KP P + LEA KRL ++ S SLV+ D +  + A + AG+  V +  
Sbjct: 101 KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVD 146

This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 42.0 bits (99), Expect = 6e-05
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + SN      +  +   HG  + F +I+GSDE+ + KP P+IFL A + L + P   L
Sbjct: 90  LGIISNGSLRAQKLLLRK-HGLGDYFELILGSDEIGS-KPEPEIFLAALESLGVPP-EVL 146

Query: 61  VIEDSVIGVVAGKAAG 76
            + D++  +   + AG
Sbjct: 147 HVGDNLSDIKGARNAG 162

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|223319 COG0241, HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHRYTAADE 97
           KP P + L A K  N++ S S V+ D +  + A + AG++ V+ +  +   T     A  
Sbjct: 105 KPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKW 164

Query: 98  VINSLLDL 105
           V +SL + 
Sbjct: 165 VFDSLAEF 172

Length = 181

>gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79
           KP P +   AA+ +N+   + ++++DS  G  +G AAGMEV
Sbjct: 142 KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEV 182

Length = 221

>gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 26  FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 85
           F  I+G D +   KP P   L   K   + PS SL + DS   V+A KAAG++ VA+   
Sbjct: 144 FRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY- 202

Query: 86  PKQTHRYTAADE----VINSLLDLRP 107
               H    A+E    VI+ L  L P
Sbjct: 203 -GYNHGRPIAEESPALVIDDLRALLP 227

Length = 272

>gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 38  GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG-KAAGMEVVAVPSLPKQTHRYTAAD 96
           GKPS   FLEA +    EP  +++I D     V G +  GM  + V     +T +Y  +D
Sbjct: 178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV-----RTGKYRPSD 232

Query: 97  E 97
           E
Sbjct: 233 E 233

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 38  GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAV 82
           GKPSP I+  A ++L ++ S  L++ D +   ++  KAAG++ + V
Sbjct: 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLV 234

Length = 269

>gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 30  VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 82
           V +D+V  G+P+P + L+ A  L +   +++V + D+V  +  G+ AGM  V V
Sbjct: 147 VTADDVPAGRPAPWMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGV 200

This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253

>gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated

 Score = 39.4 bits (93), Expect = 7e-04
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76
           KP P + L  A+RLN++ + S ++ DS+  + A  AAG
Sbjct: 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAG 140

Length = 181

>gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 26  FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGM 77
           F  +V S EV   KP P IF EA +R  + P  +L I DS+       +AAG 
Sbjct: 147 FDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199

This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82
           KPSP  + +A +   ++P  ++  +DS   + AGKA GM+ V V
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

>gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 82
            +V +D+V  G+P P + L+ A  L +   ++ V ++D+V G+  G  AGM  V V
Sbjct: 147 HVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGV 202

Length = 267

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	274
PLN02940	382	riboflavin kinase	100.0
TIGR00083	288	ribF riboflavin kinase/FMN adenylyltransferase. mu	100.0
PRK05627	305	bifunctional riboflavin kinase/FMN adenylyltransfe	100.0
PF01687	125	Flavokinase: Riboflavin kinase; InterPro: IPR01586	100.0
COG0196	304	RibF FAD synthase [Coenzyme metabolism]	100.0
KOG3110	153	consensus Riboflavin kinase [Coenzyme transport an	100.0
PRK07143	279	hypothetical protein; Provisional	100.0
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.6
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.56
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.56
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.54
PLN02575	381	haloacid dehalogenase-like hydrolase	99.53
PRK09449	224	dUMP phosphatase; Provisional	99.53
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.52
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.52
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.52
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.52
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.51
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.51
PRK13288	214	pyrophosphatase PpaX; Provisional	99.51
COG0546	220	Gph Predicted phosphatases [General function predi	99.51
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.5
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.49
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.49
PLN02811	220	hydrolase	99.49
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.48
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.48
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.47
PRK11587	218	putative phosphatase; Provisional	99.47
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.46
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.45
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.42
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.41
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.4
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.4
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.38
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.37
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.36
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.35
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.35
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.33
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.32
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.31
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.3
PRK06769	173	hypothetical protein; Validated	99.28
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.26
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.24
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.23
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.23
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.23
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.22
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.2
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.19
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.18
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.16
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.16
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.12
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.11
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.08
cd02064	180	FAD_synthetase_N FAD synthetase, N-terminal domain	99.03
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	98.93
PHA02530	300	pseT polynucleotide kinase; Provisional	98.92
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.91
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	98.91
PHA02597	197	30.2 hypothetical protein; Provisional	98.91
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.9
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	98.89
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.84
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	98.79
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	98.73
PLN02645	311	phosphoglycolate phosphatase	98.73
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	98.71
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.65
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.64
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.55
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.53
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.53
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.51
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.51
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.5
PRK10444	248	UMP phosphatase; Provisional	98.45
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.35
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.31
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.23
PLN02954	224	phosphoserine phosphatase	98.19
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.12
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	98.08
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.01
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	97.99
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	97.99
COG0241	181	HisB Histidinol phosphatase and related phosphatas	97.98
PRK11133	322	serB phosphoserine phosphatase; Provisional	97.91
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	97.91
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	97.87
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	97.86
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	97.71
PTZ00445	219	p36-lilke protein; Provisional	97.65
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	97.6
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.6
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.5
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.5
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	97.46
cd02169	297	Citrate_lyase_ligase Citrate lyase ligase. Citrate	97.46
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	97.44
PRK08238	479	hypothetical protein; Validated	97.27
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	97.24
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	97.1
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	96.94
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	96.89
smart00764	182	Citrate_ly_lig Citrate lyase ligase C-terminal dom	96.79
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	96.74
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	96.4
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	96.39
PF06574	157	FAD_syn: FAD synthetase; InterPro: IPR015864 Ribof	96.21
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	95.75
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	95.69
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	95.57
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	95.17
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	95.09
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	95.04
PRK01158	230	phosphoglycolate phosphatase; Provisional	94.91
PRK10671	834	copA copper exporting ATPase; Provisional	94.62
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	94.43
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	94.39
COG4229	229	Predicted enolase-phosphatase [Energy production a	94.24
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	94.13
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	93.84
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	93.75
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	93.71
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	93.03
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	92.84
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	92.55
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	92.21
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	90.59
COG4087	152	Soluble P-type ATPase [General function prediction	90.33
PHA03398	303	viral phosphatase superfamily protein; Provisional	89.99
PLN02645	311	phosphoglycolate phosphatase	88.06
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	87.53
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	87.38
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	86.52
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	86.29
PRK10513	270	sugar phosphate phosphatase; Provisional	84.98
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	84.97
PRK10976	266	putative hydrolase; Provisional	84.45
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	84.31
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	82.09

>PLN02940 riboflavin kinase

Probab=100.00  E-value=2.2e-67  Score=489.09  Aligned_cols=270  Identities=84%  Similarity=1.376  Sum_probs=245.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+.++.|+.++||.+++++++..+||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus       112 l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I  191 (382)
T PLN02940        112 MALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI  191 (382)
T ss_pred             EEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence            58999999999887774378999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCC
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDV  160 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~  160 (274)
                      ++.++.........++.++.++.++....+++|++++|+.+.||+|||+++|+|+||+++||+.||||||||.++...++
T Consensus       192 ~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~~~~~~~~~~~y~~~G~Vv~G~~~G~~~lg~PTaNl~~~~~~~~  271 (382)
T PLN02940        192 AVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIGGPVIKGFGRGSKVLGIPTANLSTENYSDV  271 (382)
T ss_pred             EECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccccccCcCCcCCEEEEEEEEeCCccCcccCCCCcccCCcchhhhh
Confidence            99886443334456778999999988888899999999999999999999999999999998548999999998764346


Q ss_pred             CCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHH
Q 023972          161 LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK  240 (274)
Q Consensus       161 ~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~q  240 (274)
                      +|.|+.|||++|+.++++.+|+||+|||+||||++.+.++|||||+||++||||++|+|+|++|||+|+||+|+|+|++|
T Consensus       272 ~~~p~~GVY~~~~~~~~~~~~~~v~niG~~Pt~~~~~~~~E~~i~~df~~dlyg~~i~v~~~~~lR~e~kF~~~~~L~~q  351 (382)
T PLN02940        272 LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIAK  351 (382)
T ss_pred             cCCCCCEEEEEEEEECCCceEEEEEEecCCCccCCCccEEEEEEeCCCCCCCCCCeEEEEEehhcCCCCCCCCHHHHHHH
Confidence            76445999999999975468999999999999987777899999955999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCccccCCCCCCCCcccc
Q 023972          241 IHEDRKVAERALDLPLYSKYRDDPYLKITS  270 (274)
Q Consensus       241 i~~D~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (274)
                      |++|++.||++|+.|.|+.|++|.||+++.
T Consensus       352 i~~D~~~a~~~~~~~~~~~~~~~~~~~~~~  381 (382)
T PLN02940        352 IHEDRRIAEKALDLPLYAKYKDDPYLTNSL  381 (382)
T ss_pred             HHHHHHHHHHHHcCchhhhhccChhhccCC
Confidence            999999999999999999999999999874

>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase

Probab=100.00  E-value=9e-53  Score=375.09  Aligned_cols=214  Identities=24%  Similarity=0.327  Sum_probs=180.8

Q ss_pred             HHcCCCCCCcEEEecC-CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh----------HHHHHHcCCEEEEecCCC
Q 023972           18 YQHGWNESFSVIVGSD-EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG----------VVAGKAAGMEVVAVPSLP   86 (274)
Q Consensus        18 ~~~gl~~~Fd~v~~~~-~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d----------i~aA~~aGi~vi~V~~~~   86 (274)
                      +.+|+    |.++.-. +...++.+|+.|++-+..-.++++.++++.|++||          .+.+++.|+.++.++...
T Consensus        64 ~~~Gv----d~~~~~~F~~~~a~ls~e~Fi~~~l~~~l~~~~ivvG~Df~FG~~~~G~~~~L~~~~~~~g~~v~~~~~~~  139 (288)
T TIGR00083        64 QIKGV----EQLLVVVFDEEFANLSALQFIDQLIVKHLHVKFLVVGDDFRFGHDRQGDFLLLQLFGNTTIFCVIVKQLFC  139 (288)
T ss_pred             HHcCC----CEEEEeCCCHHHHcCCHHHHHHHHHHhccCCcEEEECCCccCCCCCCCCHHHHHHhccccCcEEEEecccc
Confidence            55565    5544433 33567899999997432222344788888999997          344678899999998876


Q ss_pred             CcccccccccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCC
Q 023972           87 KQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS  166 (274)
Q Consensus        87 ~~~~~iSss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~  166 (274)
                      .+ ..+||+ .|++.+.++++..          |++||||||+++|+|+||+++|| +||||||||.+++. .++|+  .
T Consensus       140 ~~-~~ISST-~IR~~l~~G~i~~----------A~~lLGr~y~i~G~Vv~G~~~Gr-~lGfPTaNl~~~~~-~~~p~--~  203 (288)
T TIGR00083       140 QD-IRISSS-AIRQALKNGDLEL----------ANKLLGRPYFICGTVIHGQKLGR-TLGFPTANIKLKNQ-VLPLK--G  203 (288)
T ss_pred             CC-CeECHH-HHHHHHHcCCHHH----------HHHhhhhhhccceEEEecCCCcc-cccCceEEecCccc-ccCCC--c
Confidence            66 778885 7777888899987          99999999999999999999997 79999999998774 56665  8


Q ss_pred             ceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHH
Q 023972          167 GVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK  246 (274)
Q Consensus       167 GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~  246 (274)
                      |||++++.++ +.+|+||+|||.||||++.+..+|||||| |++||||++|+|+|++|||+|+||+|+|+|++||++|++
T Consensus       204 GVYa~~v~i~-~~~y~~v~niG~~PT~~~~~~~~E~~ild-f~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~  281 (288)
T TIGR00083       204 GYYVVVVLLN-GEPYPGVGNIGNRPTFIGQQLVIEVHLLD-FSGELYGQEIKVTLVKKIRPEQKFSSLDELKNQIQQDIL  281 (288)
T ss_pred             ceEEEEEEeC-CeEEEEEEEeCCCCccCCCceEEEEEeCC-CCcccCCCEEEEEeHHhccCCCCcCCHHHHHHHHHHHHH
Confidence            9999999986 48899999999999998766789999996 999999999999999999999999999999999999999


Q ss_pred             HHHHHcC
Q 023972          247 VAERALD  253 (274)
Q Consensus       247 ~a~~~~~  253 (274)
                      .||++|+
T Consensus       282 ~ar~~~~  288 (288)
T TIGR00083       282 QAKKWFN  288 (288)
T ss_pred             HHHHHhC
Confidence            9999874

multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).

>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed

Probab=100.00  E-value=3.8e-50  Score=361.39  Aligned_cols=210  Identities=29%  Similarity=0.387  Sum_probs=178.6

Q ss_pred             CcEEEec-CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh----------HHHHHHcCCEEEEecCCCCccccccc
Q 023972           26 FSVIVGS-DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG----------VVAGKAAGMEVVAVPSLPKQTHRYTA   94 (274)
Q Consensus        26 Fd~v~~~-~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d----------i~aA~~aGi~vi~V~~~~~~~~~iSs   94 (274)
                      +|.++.. .+-..++.+|+.|++.+..-.++++.++++.|+.||          .+.+++.|+.++.++....++..+||
T Consensus        84 VD~~~~~~F~~~~~~ls~e~Fi~~~l~~~l~~~~iVvG~Df~FG~~~~G~~~~L~~~~~~~g~~v~~v~~~~~~~~~ISS  163 (305)
T PRK05627         84 VDYVLVLPFDEEFAKLSAEEFIEDLLVKGLNAKHVVVGFDFRFGKKRAGDFELLKEAGKEFGFEVTIVPEVKEDGERVSS  163 (305)
T ss_pred             CCEEEEecCCHHHhcCCHHHHHHHHHHhccCCCEEEECCCCCCCCCCCCCHHHHHHHHHHcCcEEEEeccEecCCCcCch
Confidence            5655542 233467889999998432223355788888999886          23367789999999887777778888


Q ss_pred             ccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEE
Q 023972           95 ADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAG  174 (274)
Q Consensus        95 s~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~  174 (274)
                      + .|++.+.++++..          |++||||||+++|+|+||+++|| +||||||||.+++. . +|+  .|||++|+.
T Consensus       164 T-~IR~~I~~G~i~~----------A~~lLg~~y~~~g~V~~G~~~Gr-~lgfPTaNl~~~~~-~-~p~--~GVY~~~~~  227 (305)
T PRK05627        164 T-AIRQALAEGDLEL----------ANKLLGRPYSISGRVVHGQKLGR-TLGFPTANLPLPDR-V-LPA--DGVYAVRVK  227 (305)
T ss_pred             H-HHHHHHHcCCHHH----------HHhhhcCCCceEEEEEECcccCc-cccceeEeecCccC-C-CCC--ceEEEEEEE
Confidence            6 7778888899987          99999999999999999999996 79999999998774 3 464  899999999


Q ss_pred             EcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 023972          175 LSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD  253 (274)
Q Consensus       175 ~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~  253 (274)
                      +++ .+|+||+|||+||||++.+.++|+|||| |++|+||++|+|+|++|||+|+||+|+|||++||++|++.||++|.
T Consensus       228 i~~-~~y~~~~~iG~~ptf~~~~~~~E~~i~d-f~~d~Yg~~i~v~~~~~iR~e~kF~s~~~L~~~i~~D~~~a~~~~~  304 (305)
T PRK05627        228 VDG-KPYPGVANIGTRPTVDGGRQLLEVHLLD-FNGDLYGEHITVEFLKKLRDEQKFDSLDELKAQIAKDIETARAFLA  304 (305)
T ss_pred             ECC-EEEEEEEEecCCCccCCCceEEEEEecC-CCCccCCCEEEEEEhhhcCCCCCcCCHHHHHHHHHHHHHHHHHHhh
Confidence            974 8999999999999998767789999995 9999999999999999999999999999999999999999999985

>PF01687 Flavokinase: Riboflavin kinase; InterPro: IPR015865 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2

Probab=100.00  E-value=4.1e-50  Score=315.56  Aligned_cols=125  Identities=39%  Similarity=0.713  Sum_probs=110.0

Q ss_pred             CCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeee
Q 023972          123 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEP  202 (274)
Q Consensus       123 lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~  202 (274)
                      ||||||+++|+|+||+++|| +||||||||.++.. .++|+  .|||++|+.+++ .+|+||+|||+||||++.+.++||
T Consensus         1 LLG~py~i~G~Vv~G~~~Gr-~lGfPTANl~~~~~-~~~p~--~GVYa~~v~~~~-~~~~~v~niG~~PTf~~~~~~vE~   75 (125)
T PF01687_consen    1 LLGRPYSISGTVVHGFGRGR-KLGFPTANLDIPDD-KLLPK--EGVYAVWVRVDG-KWYPGVTNIGYRPTFDGKERTVEV   75 (125)
T ss_dssp             HHTSSEEEEEEEEC-SSCCC-CTTS-EEEEEEHCC-CTCCC--TEEEEEEEEETS-EEEEEEEEEEEETTTSSCEEEEEE
T ss_pred             CcCCCEEEEEEEEeCCcccc-ccCCccccccCCcc-ccccc--CEEEEEEEEECC-EEEEeEEEecCCCccCcCceeEEE
Confidence            58999999999999999996 79999999998553 67886  799999999974 899999999999999988899999


Q ss_pred             eEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 023972          203 WLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD  253 (274)
Q Consensus       203 ~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~  253 (274)
                      |||| |++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus        76 hild-f~~dlYg~~i~v~~~~~lR~e~kF~s~e~L~~qI~~D~~~a~~~lq  125 (125)
T PF01687_consen   76 HILD-FDGDLYGKKIKVEFLKFLRPEKKFDSLEELKEQIKKDIEQARKYLQ  125 (125)
T ss_dssp             EETT-SSSE-TTSEEEEEEEEEEEE----SSHHHHHHHHHHHHHHHHHHH-
T ss_pred             EEec-cCcccCCCeEEEEEEeCccCCcccCCHHHHHHHHHHHHHHHHHhcC
Confidence            9995 9999999999999999999999999999999999999999999984

7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents the riboflavin kinase domains from bacteria and eukaryotes.; GO: 0008531 riboflavin kinase activity, 0009231 riboflavin biosynthetic process; PDB: 1Q9S_A 1NB9_A 1P4M_A 1NB0_A 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A ....

>COG0196 RibF FAD synthase [Coenzyme metabolism]

Probab=100.00  E-value=3.4e-49  Score=351.87  Aligned_cols=207  Identities=29%  Similarity=0.451  Sum_probs=179.5

Q ss_pred             cEEEec-CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH----------HHHHHcCCEEEEecCCCCcccccccc
Q 023972           27 SVIVGS-DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV----------VAGKAAGMEVVAVPSLPKQTHRYTAA   95 (274)
Q Consensus        27 d~v~~~-~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di----------~aA~~aGi~vi~V~~~~~~~~~iSss   95 (274)
                      |.++.- .+...++.+|+.|+. +..-.+.++.++++.|+.||.          ..+.+ |+.++.++....++.++||+
T Consensus        87 d~~~v~~F~~~fa~ls~~~Fv~-~lv~~l~~k~ivvG~DF~FGk~~~g~~~~L~~~~~~-gf~v~~v~~~~~~~~~iSSt  164 (304)
T COG0196          87 DALVVLDFDLEFANLSAEEFVE-LLVEKLNVKHIVVGFDFRFGKGRQGNAELLRELGQK-GFEVTIVPKINEEGIRISST  164 (304)
T ss_pred             cEEEEEeCCHhHhhCCHHHHHH-HHHhccCCcEEEEecccccCCCCCCCHHHHHHhccC-CceEEEeccEecCCcEEchH
Confidence            554443 455688999999999 333344557899999999872          23455 89999999988888889986


Q ss_pred             cEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEE
Q 023972           96 DEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL  175 (274)
Q Consensus        96 ~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~  175 (274)
                       .|++.+.++++..          |+.+|||||+++|+|+||.++|| +||||||||.++..  .+|  +.|||++++.+
T Consensus       165 -~IR~~L~~gdl~~----------A~~lLG~py~i~G~Vv~G~~~Gr-~lGfPTaNi~~~~~--~~~--~~GVYav~v~~  228 (304)
T COG0196         165 -AIRQALREGDLEE----------ANKLLGRPYSIEGKVVHGQKLGR-TLGFPTANIYLKDN--VLP--AFGVYAVRVKL  228 (304)
T ss_pred             -HHHHHHhcCCHHH----------HHHhcCCCeEEEEEEEccccccc-ccCCCccccccccc--ccc--CCeeEEEEEEE
Confidence             7788888899987          99999999999999999999996 79999999998774  455  38999999999


Q ss_pred             cCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 023972          176 STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD  253 (274)
Q Consensus       176 ~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~  253 (274)
                      .+ ..|+||+|||+|||+++....+|+|||| |++|+||+.++|.|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus       229 ~~-~~~~gv~~vG~rpt~~~~~~~lEvhi~D-f~~dlYG~~i~v~~~~~iR~e~kF~s~d~L~~qi~~D~~~Ar~~~~  304 (304)
T COG0196         229 DG-GVYPGVANVGYRPTVDGSERSLEVHILD-FNGDLYGERVKVRFLKFIRDEKKFDSLDELKEQIEKDIERARKLLA  304 (304)
T ss_pred             CC-ccccceEEecccccccCCeeEEEEEEec-ccccccCceEEEEEhhhcccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence            75 4499999999999999888899999996 9999999999999999999999999999999999999999999984

>KOG3110 consensus Riboflavin kinase [Coenzyme transport and metabolism]

Probab=100.00  E-value=3.1e-45  Score=281.18  Aligned_cols=148  Identities=54%  Similarity=1.020  Sum_probs=136.8

Q ss_pred             cCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCce
Q 023972          120 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT  199 (274)
Q Consensus       120 a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~  199 (274)
                      ++.+.-.||.+.|.||+|++||+++||+||||+.....+.++-....|||.+|+.++.+.+|++++||||||.+++++.+
T Consensus         5 ~~~~~~~P~~~~g~VVrGFGRGskeLGiPTAN~~~~~v~~l~~~l~~GvYfG~A~v~~~~v~kMvmSIGwNP~Y~N~~Kt   84 (153)
T KOG3110|consen    5 AQPMSPLPLFFGGEVVRGFGRGSKELGIPTANFPENVVPKLPEDLPSGVYFGWAHVDKGDVFKMVMSIGWNPYYKNKKKT   84 (153)
T ss_pred             cccCCCCCEEecCeEEEecCCCccccCCccCCCCHHHHhcccccCCCceEEEeeeecCCCceeEEEEcccCcccCCcccc
Confidence            34455579999999999999999999999999987655444444558999999999877899999999999999999999


Q ss_pred             eeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCc
Q 023972          200 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  267 (274)
Q Consensus       200 ~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~  267 (274)
                      +|+||+|||..|+||+++++.+++|||||+.|+|+|+|++.|+.||+.|++.|++|.+++|+.|.||+
T Consensus        85 ~E~hlih~f~~DFYge~l~~~IvGyiRpe~nf~slesLi~~I~~Di~vA~~~l~~p~~~k~K~dpff~  152 (153)
T KOG3110|consen   85 MELHLIHDFGEDFYGETLKVIIVGYIRPELNFDSLESLIEAIHGDIEVAKKVLDLPEYAKFKEDPFFT  152 (153)
T ss_pred             eeeeeehhcccchhhheeeEEEEEeeccccCcchHHHHHHHHHhhHHHHHHhhcCcchhhhccCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999996

>PRK07143 hypothetical protein; Provisional

Probab=100.00  E-value=5.9e-39  Score=284.67  Aligned_cols=191  Identities=17%  Similarity=0.115  Sum_probs=156.2

Q ss_pred             HHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH------HHHHcCCEEEEecCCCCccc
Q 023972           18 YQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV------AGKAAGMEVVAVPSLPKQTH   90 (274)
Q Consensus        18 ~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~------aA~~aGi~vi~V~~~~~~~~   90 (274)
                      +.+|+    |.++.- .+...++.+|+.|++.+..  +.++.++++.|+.||..      .-++.+-.+..++....++.
T Consensus        75 ~~~Gv----d~~~~~~F~~~~a~ls~e~Fi~~ll~--l~~~~iVvG~Df~FG~~r~G~~~~L~~~~~~v~~v~~~~~~g~  148 (279)
T PRK07143         75 ANLGF----KNIILLDFNEELQNLSGNDFIEKLTK--NQVSFFVVGKDFRFGKNASWNADDLKEYFPNVHIVEILKINQQ  148 (279)
T ss_pred             HHCCC----CEEEEeCCCHHHhCCCHHHHHHHHHh--cCCCEEEECCCcccCCCCCCCHHHHHHhCCcEEEeCCEEcCCc
Confidence            55555    544433 3445788999999985544  45567777789998732      22343226777887777777


Q ss_pred             ccccccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEE
Q 023972           91 RYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYF  170 (274)
Q Consensus        91 ~iSss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~  170 (274)
                      .+||+ .|++.+.++++..          |++||||||+++|+|+||            |||.+++. +++|+  .|||+
T Consensus       149 ~ISST-~IR~~l~~G~i~~----------A~~lLGr~y~i~G~V~~G------------aNl~~~~~-~~~P~--~GVYa  202 (279)
T PRK07143        149 KISTS-LLKEFIEFGDIEL----------LNSLLLYNYSISITINKN------------FEFTYPQN-IIKLH--AGIYL  202 (279)
T ss_pred             EEcHH-HHHHHHHcCCHHH----------HHHHcCCCcEEEEEEECC------------eEeCCCcC-cCCCC--CcEEE
Confidence            88886 7777788899987          999999999999999998            89998764 67776  89999


Q ss_pred             EEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCc--ccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHH
Q 023972          171 GWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE--DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVA  248 (274)
Q Consensus       171 ~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~--dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a  248 (274)
                      ++|.++ +.+|+||+|||.|||       +|||||| |++  |+|| +|+|+|++|||+|+||+| +   +||++|++.|
T Consensus       203 ~~v~~~-~~~y~~v~niG~~PT-------iE~hild-f~~~~dlYg-~i~v~f~~~iR~e~kF~s-~---~qi~~D~~~a  268 (279)
T PRK07143        203 AYVVIN-NFKYHGILKINFNNK-------NKIKFFD-FDLIINKYQ-EIFIEIVKEIRIISSNED-N---NILNDDIEIA  268 (279)
T ss_pred             EEEEEC-CEEEEEEEEecCCce-------EEEEEec-CCCCcCCCC-EEEEEEhhccCCCcCCCc-H---HHHHHHHHHH
Confidence            999986 489999999999999       8999996 999  8999 999999999999999999 5   8899999999


Q ss_pred             HHHcCC
Q 023972          249 ERALDL  254 (274)
Q Consensus       249 ~~~~~~  254 (274)
                      |++|+.
T Consensus       269 ~~~~~~  274 (279)
T PRK07143        269 KKFFLN  274 (279)
T ss_pred             HHHHHh
Confidence            999864

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.60  E-value=4.3e-15  Score=130.76  Aligned_cols=106  Identities=29%  Similarity=0.390  Sum_probs=92.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+.+|||.+++++++...||+|+.|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus       127 l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i  205 (248)
T PLN02770        127 RAAVTNAPRENAELMI-SLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV  205 (248)
T ss_pred             EEEEeCCCHHHHHHHH-HHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEE
Confidence            5899999999999877 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc-cccccEEEeccccccc
Q 023972           81 AVPSLPKQTHR-YTAADEVINSLLDLRP  107 (274)
Q Consensus        81 ~V~~~~~~~~~-iSss~~ii~~l~e~~~  107 (274)
                      ++.++...... ...++.+++++.+..+
T Consensus       206 ~v~~g~~~~~l~~~~a~~vi~~~~e~~~  233 (248)
T PLN02770        206 GLTTRNPESLLMEAKPTFLIKDYEDPKL  233 (248)
T ss_pred             EEeCCCCHHHHhhcCCCEEeccchhhHH
Confidence            99876432211 2356788888887443

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.56  E-value=1.6e-14  Score=128.05  Aligned_cols=103  Identities=34%  Similarity=0.491  Sum_probs=89.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+.+||+.+++++++...||+|+.|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus       128 l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i  206 (260)
T PLN03243        128 IAVASTRPRRYLERAI-EAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCV  206 (260)
T ss_pred             EEEEeCcCHHHHHHHH-HHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEE
Confidence            5899999999998777 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++.. .........++.++.++.++
T Consensus       207 ~v~g-~~~~~~l~~ad~vi~~~~el  230 (260)
T PLN03243        207 AVAG-KHPVYELSAGDLVVRRLDDL  230 (260)
T ss_pred             EEec-CCchhhhccCCEEeCCHHHH
Confidence            9963 22222233456778877764

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.56  E-value=2.3e-14  Score=123.25  Aligned_cols=103  Identities=24%  Similarity=0.391  Sum_probs=87.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||+....+...+ +++|+..+||.++++++.+..||+|+.|..++++++++|+++++|||+. .|+++|+++|+.+
T Consensus       113 ~~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~  191 (221)
T TIGR02253       113 LGIITDGLPVKQWEKL-ERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKT  191 (221)
T ss_pred             EEEEeCCchHHHHHHH-HhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEE
Confidence            5899999988888777 8899999999999999999999999999999999999999999999998 7999999999999


Q ss_pred             EEecCCCCcc---cccccccEEEecccc
Q 023972           80 VAVPSLPKQT---HRYTAADEVINSLLD  104 (274)
Q Consensus        80 i~V~~~~~~~---~~iSss~~ii~~l~e  104 (274)
                      +++..+....   .....++.+++++.+
T Consensus       192 i~~~~~~~~~~~~~~~~~~~~~i~~~~e  219 (221)
T TIGR02253       192 VWINQGKSSKMEDDVYPYPDYEISSLRE  219 (221)
T ss_pred             EEECCCCCcccccccccCCCeeeCcHHh
Confidence            9998754322   112334567776654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.54  E-value=2.3e-14  Score=126.17  Aligned_cols=86  Identities=20%  Similarity=0.270  Sum_probs=79.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC-cEEEecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F-d~v~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||+++..+...+ +++|+..+| |.|++++++...||+|+.|..+++++++. |++|+||||+..|+++|+++|+.
T Consensus       118 l~IvT~~~~~~~~~~l-~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~  196 (253)
T TIGR01422       118 IGSTTGYTREMMDVVA-PEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW  196 (253)
T ss_pred             EEEECCCcHHHHHHHH-HHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence            5899999999998767 888999986 99999999999999999999999999995 99999999999999999999999


Q ss_pred             EEEecCCCC
Q 023972           79 VVAVPSLPK   87 (274)
Q Consensus        79 vi~V~~~~~   87 (274)
                      +++|.++..
T Consensus       197 ~i~v~~g~~  205 (253)
T TIGR01422       197 TVGLILSSN  205 (253)
T ss_pred             EEEEecCCc
Confidence            999988753

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.53  E-value=4.7e-14  Score=130.44  Aligned_cols=105  Identities=39%  Similarity=0.470  Sum_probs=92.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+..|||.+++++++...||+|++|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus       235 laIaSn~~~~~~~~~L-~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~I  313 (381)
T PLN02575        235 MALVSTRPRKTLENAI-GSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV  313 (381)
T ss_pred             EEEEeCCCHHHHHHHH-HHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence            5899999999999777 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDLRP  107 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~~~  107 (274)
                      ++...... .....++.+++++.++..
T Consensus       314 gV~~~~~~-~~l~~Ad~iI~s~~EL~~  339 (381)
T PLN02575        314 AVASKHPI-YELGAADLVVRRLDELSI  339 (381)
T ss_pred             EECCCCCh-hHhcCCCEEECCHHHHHH
Confidence            99864322 223456788999988644

>PRK09449 dUMP phosphatase; Provisional

Probab=99.53  E-value=5.1e-14  Score=121.48  Aligned_cols=104  Identities=21%  Similarity=0.335  Sum_probs=86.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecCH-hhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSV-IGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~-~di~aA~~aGi~   78 (274)
                      ++|+||+....+...+ +++|+..+||.++++++++..||+|+.|..+++++++.| ++|++|||+. .|+++|+++|+.
T Consensus       113 ~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~  191 (224)
T PRK09449        113 MGIITNGFTELQQVRL-ERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGID  191 (224)
T ss_pred             EEEEeCCcHHHHHHHH-HhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCc
Confidence            5899999999888777 889999999999999999999999999999999999854 7899999998 699999999999


Q ss_pred             EEEecCCCCcccccccccEEEeccccc
Q 023972           79 VVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++++............++.+++++.++
T Consensus       192 ~i~~~~~~~~~~~~~~~~~~i~~~~el  218 (224)
T PRK09449        192 TCWLNAHGREQPEGIAPTYQVSSLSEL  218 (224)
T ss_pred             EEEECCCCCCCCCCCCCeEEECCHHHH
Confidence            999975322211112356777777654

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.52  E-value=1.8e-14  Score=124.73  Aligned_cols=84  Identities=48%  Similarity=0.721  Sum_probs=79.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||+++..+...| +.+|+.++|+.+++++++..+||+|+.|+.+++++|++|.+||+|+|+..|+++|+++||.++
T Consensus       105 ~avaS~s~~~~~~~~L-~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv  183 (221)
T COG0637         105 LAVASSSPRRAAERVL-ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV  183 (221)
T ss_pred             EEEecCChHHHHHHHH-HHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence            4789999999888777 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      .+...
T Consensus       184 ~v~~~  188 (221)
T COG0637         184 GVPAG  188 (221)
T ss_pred             EecCC
Confidence            99873

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.52  E-value=7.2e-14  Score=119.38  Aligned_cols=104  Identities=28%  Similarity=0.401  Sum_probs=90.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+.+..+...+ +++|+.++|+.+++++++...||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus       104 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i  182 (213)
T TIGR01449       104 LGLVTNKPTPLARPLL-ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSV  182 (213)
T ss_pred             EEEEeCCCHHHHHHHH-HHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEE
Confidence            5899999999888766 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCccc--ccccccEEEeccccc
Q 023972           81 AVPSLPKQTH--RYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~--~iSss~~ii~~l~e~  105 (274)
                      ++.++.....  ....++.+++++.++
T Consensus       183 ~v~~g~~~~~~l~~~~a~~~i~~~~~l  209 (213)
T TIGR01449       183 LLTYGYRYGEAIDLLPPDVLYDSLNEL  209 (213)
T ss_pred             EEccCCCCCcchhhcCCCeEeCCHHHH
Confidence            9987643222  223566788877664

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.52  E-value=6.3e-14  Score=118.77  Aligned_cols=84  Identities=24%  Similarity=0.413  Sum_probs=79.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+.++||.++++++++..||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus       111 ~~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i  189 (198)
T TIGR01428       111 LAILSNGSPAMLKSLV-KHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA  189 (198)
T ss_pred             EEEEeCCCHHHHHHHH-HHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence            5899999999998777 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      ++...
T Consensus       190 ~v~r~  194 (198)
T TIGR01428       190 WVNRP  194 (198)
T ss_pred             EecCC
Confidence            99864

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.52  E-value=3.8e-14  Score=118.92  Aligned_cols=83  Identities=35%  Similarity=0.605  Sum_probs=78.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...| +++|+.+|||.|++++++...||+|+.|..++++++++|++||+|||+..|+++|+++|++++
T Consensus       105 l~I~T~~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i  183 (188)
T PRK10725        105 MAVGTGSESAIAEALL-AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAV  183 (188)
T ss_pred             EEEEcCCchHHHHHHH-HhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEE
Confidence            5899999999998777 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecC
Q 023972           81 AVPS   84 (274)
Q Consensus        81 ~V~~   84 (274)
                      .+..
T Consensus       184 ~~~~  187 (188)
T PRK10725        184 DVRL  187 (188)
T ss_pred             eecC
Confidence            8853

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.51  E-value=4.5e-14  Score=121.93  Aligned_cols=104  Identities=30%  Similarity=0.532  Sum_probs=91.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+....+...+ +++++..+|+.+++++++..+||+|+.|..+++++|++|++|++|||+..|+++|+++|+.++
T Consensus       111 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i  189 (222)
T PRK10826        111 IGLASASPLHMLEAVL-TMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSI  189 (222)
T ss_pred             EEEEeCCcHHHHHHHH-HhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEE
Confidence            5899999999988766 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcc-cccccccEEEeccccc
Q 023972           81 AVPSLPKQT-HRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~-~~iSss~~ii~~l~e~  105 (274)
                      +++...... .....++.++.++.++
T Consensus       190 ~v~~~~~~~~~~~~~~~~~~~~~~dl  215 (222)
T PRK10826        190 VVPAPEQQNDPRWALADVKLESLTEL  215 (222)
T ss_pred             EecCCccCchhhhhhhheeccCHHHH
Confidence            998764333 2234456788888775

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.51  E-value=9.2e-14  Score=119.42  Aligned_cols=104  Identities=23%  Similarity=0.298  Sum_probs=88.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHh-CCCCCcEEEEecCH-hhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIEDSV-IGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l-~v~p~~~vvvgD~~-~di~aA~~aGi~   78 (274)
                      ++|+||+....+...+ +.+|+..+||.++++++.+..||+|++|..+++++ +++|+++|+|||+. .|+++|+++|+.
T Consensus       115 ~~i~Sn~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~  193 (224)
T TIGR02254       115 LYIVTNGVRETQYKRL-RKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD  193 (224)
T ss_pred             EEEEeCCchHHHHHHH-HHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence            5899999999888766 88999999999999999999999999999999999 99999999999998 699999999999


Q ss_pred             EEEecCCCCcccccccccEEEeccccc
Q 023972           79 VVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++++.++.........++.+++++.++
T Consensus       194 ~i~~~~~~~~~~~~~~~~~~~~~~~el  220 (224)
T TIGR02254       194 TCWMNPDMHPNPDDIIPTYEIRSLEEL  220 (224)
T ss_pred             EEEECCCCCCCCCCCCCceEECCHHHH
Confidence            999987533222223445677777653

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.51  E-value=6.8e-14  Score=120.06  Aligned_cols=104  Identities=27%  Similarity=0.438  Sum_probs=91.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+.+..+...+ +.+|+.++|+.+++++++...||+|+.|.+++++++++|+++++|||+..|+++|+++|+.++
T Consensus       101 ~~i~S~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i  179 (214)
T PRK13288        101 LGIVTTKMRDTVEMGL-KLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTA  179 (214)
T ss_pred             EEEEeCCCHHHHHHHH-HHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence            4899999999998777 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      ++.++......  ...++.+++++.++
T Consensus       180 ~v~~g~~~~~~l~~~~~~~~i~~~~~l  206 (214)
T PRK13288        180 GVAWTIKGREYLEQYKPDFMLDKMSDL  206 (214)
T ss_pred             EEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence            99887433221  23466788888764

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.51  E-value=9.5e-14  Score=120.08  Aligned_cols=104  Identities=31%  Similarity=0.487  Sum_probs=92.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...| +++|+.++|+.+++.++....||+|+.+..++++++++|++++||||+..|+++|+++|+.++
T Consensus       108 l~i~T~k~~~~~~~~l-~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v  186 (220)
T COG0546         108 LGIVTNKPERELDILL-KALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAV  186 (220)
T ss_pred             EEEEeCCcHHHHHHHH-HHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEE
Confidence            5899999999999766 889999999999998888999999999999999999998899999999999999999999999


Q ss_pred             EecCCCCc--ccccccccEEEeccccc
Q 023972           81 AVPSLPKQ--THRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~--~~~iSss~~ii~~l~e~  105 (274)
                      .|.++...  ......++.++.++.++
T Consensus       187 ~v~~g~~~~~~l~~~~~d~vi~~~~el  213 (220)
T COG0546         187 GVTWGYNSREELAQAGADVVIDSLAEL  213 (220)
T ss_pred             EEECCCCCCcchhhcCCCEEECCHHHH
Confidence            99998642  22345678899988875

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.50  E-value=1.1e-13  Score=120.27  Aligned_cols=104  Identities=25%  Similarity=0.344  Sum_probs=89.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+..+|+.++++++....||+|+.|..+++++|++|++|++|||+..|+++|+++|+.++
T Consensus       114 l~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i  192 (229)
T PRK13226        114 WGIVTNKPEYLARLIL-PQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSV  192 (229)
T ss_pred             EEEECCCCHHHHHHHH-HHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEE
Confidence            4899999998887666 888999999999999988899999999999999999999999999999999999999999999


Q ss_pred             EecCCCCccc---ccccccEEEeccccc
Q 023972           81 AVPSLPKQTH---RYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~---~iSss~~ii~~l~e~  105 (274)
                      ++.++.....   ....++.+++++.++
T Consensus       193 ~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (229)
T PRK13226        193 AALWGYRLHDDDPLAWQADVLVEQPQLL  220 (229)
T ss_pred             EEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence            9988753221   123466888888764

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.49  E-value=1.2e-13  Score=117.78  Aligned_cols=104  Identities=27%  Similarity=0.367  Sum_probs=90.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+....+...+ +++|+..+|+.++++++....||+|+.|..++++++++|++++||||+..|+.+|+++|+.++
T Consensus        94 ~~i~Sn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i  172 (205)
T TIGR01454        94 TAIATGKSGPRARSLL-EALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATV  172 (205)
T ss_pred             EEEEeCCchHHHHHHH-HHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEE
Confidence            4899999999988767 889999999999999998899999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      .+.++......  ...++.+++++.++
T Consensus       173 ~~~~g~~~~~~l~~~~~~~~~~~~~~l  199 (205)
T TIGR01454       173 AALWGEGDAGELLAARPDFLLRKPQSL  199 (205)
T ss_pred             EEEecCCChhhhhhcCCCeeeCCHHHH
Confidence            99887544332  23456777777653

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.49  E-value=1.6e-13  Score=118.29  Aligned_cols=104  Identities=30%  Similarity=0.448  Sum_probs=87.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~v   79 (274)
                      ++|+||+........+ +++||.++||.|+++++++..||+|++|..+++++|++|+++++|||+.. |+.+|+++|+++
T Consensus       117 l~ilTNg~~~~~~~~l-~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~  195 (229)
T COG1011         117 LGILTNGARPHQERKL-RQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKT  195 (229)
T ss_pred             EEEEeCCChHHHHHHH-HHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence            5899999888888777 88899999999999999999999999999999999999999999999987 779999999999


Q ss_pred             EEecCCCCcc-cccccccEEEeccccc
Q 023972           80 VAVPSLPKQT-HRYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~-~~iSss~~ii~~l~e~  105 (274)
                      +++....... .....++..+.++.++
T Consensus       196 vwi~~~~~~~~~~~~~~~~~i~~l~~l  222 (229)
T COG1011         196 VWINRGGKPLPDALEAPDYEISSLAEL  222 (229)
T ss_pred             EEECCCCCCCCCCccCCceEEcCHHHH
Confidence            9998754321 1113445667766653

>PLN02811 hydrolase

Probab=99.49  E-value=7.8e-14  Score=120.45  Aligned_cols=107  Identities=41%  Similarity=0.642  Sum_probs=88.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC--CCCCCCCCHHHHHHHHHHhC---CCCCcEEEEecCHhhHHHHHHc
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAA   75 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~--~~~~~KP~pe~f~~~l~~l~---v~p~~~vvvgD~~~di~aA~~a   75 (274)
                      ++|+||+.+..+...+.++.++.++|+.+++++  ++...||+|+.|..++++++   ++|++|+||||+..|+++|+++
T Consensus        97 ~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~a  176 (220)
T PLN02811         97 IAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNA  176 (220)
T ss_pred             EEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHC
Confidence            589999998766555545557889999999999  88889999999999999996   9999999999999999999999


Q ss_pred             CCEEEEecCCCCcccccccccEEEeccccccc
Q 023972           76 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  107 (274)
Q Consensus        76 Gi~vi~V~~~~~~~~~iSss~~ii~~l~e~~~  107 (274)
                      |+.++++.++.........++.+++++.++..
T Consensus       177 G~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~  208 (220)
T PLN02811        177 GMSVVMVPDPRLDKSYCKGADQVLSSLLDFKP  208 (220)
T ss_pred             CCeEEEEeCCCCcHhhhhchhhHhcCHhhCCH
Confidence            99999998754332223455678888877544

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.48  E-value=4e-14  Score=122.03  Aligned_cols=83  Identities=25%  Similarity=0.444  Sum_probs=76.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCc-EEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd-~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||+++..+...| +++|+.++|+ .++++++++..||+|+.|..++++++++|++|+||||+..|+++|+++|+.+
T Consensus       104 ~~ivTn~~~~~~~~~l-~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~  182 (221)
T PRK10563        104 MCVVSNGPVSKMQHSL-GKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEV  182 (221)
T ss_pred             EEEEeCCcHHHHHHHH-HhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEE
Confidence            5899999999898777 8889999996 6888888899999999999999999999999999999999999999999999


Q ss_pred             EEecC
Q 023972           80 VAVPS   84 (274)
Q Consensus        80 i~V~~   84 (274)
                      +++..
T Consensus       183 i~~~~  187 (221)
T PRK10563        183 FYFCA  187 (221)
T ss_pred             EEECC
Confidence            98864

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.48  E-value=1.6e-13  Score=118.09  Aligned_cols=104  Identities=27%  Similarity=0.426  Sum_probs=88.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCC--CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~--~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||+....+...| +++|+.  ++|+.++++++....||+|+.|..+++++++. |++|+||||+..|+++|+++|+
T Consensus       106 ~~ivT~~~~~~~~~~l-~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~  184 (220)
T TIGR03351       106 VALTTGFDRDTAERLL-EKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGA  184 (220)
T ss_pred             EEEEeCCchHHHHHHH-HHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCC
Confidence            5899999999999877 788998  99999999999989999999999999999997 7999999999999999999999


Q ss_pred             EE-EEecCCCCcccc--cccccEEEeccccc
Q 023972           78 EV-VAVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        78 ~v-i~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      .+ +++.++......  ...++.++.++.++
T Consensus       185 ~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l  215 (220)
T TIGR03351       185 GAVVGVLTGAHDAEELSRHPHTHVLDSVADL  215 (220)
T ss_pred             CeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence            99 888775433221  23455777777654

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.47  E-value=2.1e-13  Score=118.37  Aligned_cols=84  Identities=17%  Similarity=0.276  Sum_probs=77.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE-
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v-   79 (274)
                      ++|+||+++..+...+ +++|+.++||.++++++++..||+|+.|..++++++++|++|++|||+..|+++|+++|+.+ 
T Consensus       112 ~~i~Tn~~~~~~~~~l-~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~  190 (224)
T PRK14988        112 RILLTNAHPHNLAVKL-EHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYC  190 (224)
T ss_pred             EEEEeCcCHHHHHHHH-HHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEE
Confidence            5899999999988777 88999999999999999999999999999999999999999999999999999999999984 


Q ss_pred             EEecCC
Q 023972           80 VAVPSL   85 (274)
Q Consensus        80 i~V~~~   85 (274)
                      +.|...
T Consensus       191 ~~v~~~  196 (224)
T PRK14988        191 LGVTNP  196 (224)
T ss_pred             EEEeCC
Confidence            667654

>PRK11587 putative phosphatase; Provisional

Probab=99.47  E-value=2.8e-13  Score=116.77  Aligned_cols=105  Identities=30%  Similarity=0.475  Sum_probs=87.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +..++ .+|+.+++++++...||+|+.|..+++++|++|++|+||||+..|+++|+++|+.++
T Consensus       102 ~~ivTn~~~~~~~~~l-~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i  179 (218)
T PRK11587        102 WAIVTSGSVPVASARH-KAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVI  179 (218)
T ss_pred             EEEEcCCCchHHHHHH-HhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEE
Confidence            5899999988776555 77788 568899999888899999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEecccccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDLRPE  108 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~~~~  108 (274)
                      ++.++... .....++.+++++.++...
T Consensus       180 ~v~~~~~~-~~~~~~~~~~~~~~el~~~  206 (218)
T PRK11587        180 AVNAPADT-PRLDEVDLVLHSLEQLTVT  206 (218)
T ss_pred             EECCCCch-hhhccCCEEecchhheeEE
Confidence            99875432 2234466888888876443

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.46  E-value=2.6e-13  Score=113.74  Aligned_cols=81  Identities=27%  Similarity=0.442  Sum_probs=75.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCC----CCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~----~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++|+||+++..+...+ +++|+..+||.++++++...    .||+|+.|..++++++++|+++++|||+..|+++|+++|
T Consensus       100 ~~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G  178 (184)
T TIGR01993       100 KIIFTNGDRAHARRAL-NRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALG  178 (184)
T ss_pred             EEEEeCCCHHHHHHHH-HHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcC
Confidence            4799999999998777 88899999999999998877    599999999999999999999999999999999999999


Q ss_pred             CEEEEe
Q 023972           77 MEVVAV   82 (274)
Q Consensus        77 i~vi~V   82 (274)
                      +++++|
T Consensus       179 ~~~i~v  184 (184)
T TIGR01993       179 MKTVLV  184 (184)
T ss_pred             CEEeeC
Confidence            999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.45  E-value=2.8e-13  Score=120.36  Aligned_cols=86  Identities=22%  Similarity=0.287  Sum_probs=78.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC-cEEEecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F-d~v~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||+++..+...+ +.+++..+| |.+++++++...||+|+.|..+++++++. |++|+||||+..|+++|+++|+.
T Consensus       120 l~I~T~~~~~~~~~~l-~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~  198 (267)
T PRK13478        120 IGSTTGYTREMMDVVV-PLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW  198 (267)
T ss_pred             EEEEcCCcHHHHHHHH-HHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence            5899999999988766 777888875 89999999999999999999999999996 69999999999999999999999


Q ss_pred             EEEecCCCC
Q 023972           79 VVAVPSLPK   87 (274)
Q Consensus        79 vi~V~~~~~   87 (274)
                      +++|.++..
T Consensus       199 ~i~v~~g~~  207 (267)
T PRK13478        199 TVGVILSGN  207 (267)
T ss_pred             EEEEccCcc
Confidence            999988653

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.42  E-value=6.1e-13  Score=113.05  Aligned_cols=85  Identities=15%  Similarity=0.174  Sum_probs=76.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++.......+....++..+||.++++++++..||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus       103 ~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i  182 (199)
T PRK09456        103 VVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI  182 (199)
T ss_pred             EEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence            58999999887665442334788999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      .+...
T Consensus       183 ~~~~~  187 (199)
T PRK09456        183 LVTDK  187 (199)
T ss_pred             EecCC
Confidence            98763

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.41  E-value=9e-13  Score=107.81  Aligned_cols=81  Identities=33%  Similarity=0.549  Sum_probs=76.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||.++..+...+ +++|+.++|+.++++++.+..||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus        96 ~~i~Sn~~~~~~~~~l-~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i  174 (176)
T PF13419_consen   96 LVIVSNGSRERIERVL-ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTI  174 (176)
T ss_dssp             EEEEESSEHHHHHHHH-HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEE
T ss_pred             eEEeecCCcccccccc-cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEE
Confidence            4799999999998777 888999999999999999999999999999999999999999999999999999999999998


Q ss_pred             Ee
Q 023972           81 AV   82 (274)
Q Consensus        81 ~V   82 (274)
                      +|
T Consensus       175 ~v  176 (176)
T PF13419_consen  175 WV  176 (176)
T ss_dssp             EE
T ss_pred             eC
Confidence            76

...

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.40  E-value=2e-12  Score=116.26  Aligned_cols=106  Identities=34%  Similarity=0.496  Sum_probs=87.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCC---CCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGW---NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl---~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||+....+...+ ++++.   ..+|+.+ +++++...||+|+.|..++++++++|++|+||||+..|+++|+++|+
T Consensus       163 l~IvTn~~~~~~~~~l-~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~  240 (286)
T PLN02779        163 VAVCSTSNEKAVSKIV-NTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGM  240 (286)
T ss_pred             EEEEeCCCHHHHHHHH-HHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCC
Confidence            5899999999888666 55533   3344555 78888899999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCcccccccccEEEecccccccc
Q 023972           78 EVVAVPSLPKQTHRYTAADEVINSLLDLRPE  108 (274)
Q Consensus        78 ~vi~V~~~~~~~~~iSss~~ii~~l~e~~~~  108 (274)
                      .++.+.++.........++.++.++.++...
T Consensus       241 ~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~  271 (286)
T PLN02779        241 RCIVTKSSYTADEDFSGADAVFDCLGDVPLE  271 (286)
T ss_pred             EEEEEccCCccccccCCCcEEECChhhcchh
Confidence            9999988654444445677889988876554

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.40  E-value=1.6e-12  Score=107.96  Aligned_cols=80  Identities=41%  Similarity=0.655  Sum_probs=73.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+.... .. +..++|+..+||.++++++.+..||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus       104 ~~i~Tn~~~~~-~~-~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i  181 (183)
T TIGR01509       104 LALLTNSPRDH-AV-LVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTV  181 (183)
T ss_pred             EEEEeCCchHH-HH-HHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEE
Confidence            47999999988 54 43558999999999999999999999999999999999999999999999999999999999998


Q ss_pred             Ee
Q 023972           81 AV   82 (274)
Q Consensus        81 ~V   82 (274)
                      +|
T Consensus       182 ~v  183 (183)
T TIGR01509       182 LV  183 (183)
T ss_pred             eC
Confidence            75

HAD subfamilies caused by an overly broad single model.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.38  E-value=1.6e-12  Score=113.75  Aligned_cols=99  Identities=18%  Similarity=0.230  Sum_probs=81.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~v   79 (274)
                      ++|+||++..     + +++|+.++||.++++++....||+|+.|..++++++++|++|+||||+ ..|+.+|+++|+.+
T Consensus       131 l~i~Tn~~~~-----~-~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~  204 (238)
T PRK10748        131 LVAITNGNAQ-----P-ELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQA  204 (238)
T ss_pred             EEEEECCCch-----H-HHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeE
Confidence            5899998765     3 678999999999999999999999999999999999999999999999 58999999999999


Q ss_pred             EEecCCCCcc----cccccccEEEeccccc
Q 023972           80 VAVPSLPKQT----HRYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~----~~iSss~~ii~~l~e~  105 (274)
                      +++......-    ...-.++..+++|.++
T Consensus       205 i~v~~~~~~~~~~~~~~~~p~~~i~~l~el  234 (238)
T PRK10748        205 CWINPENGDLMQTWDSRLLPHIEISRLASL  234 (238)
T ss_pred             EEEcCCCccccccccccCCCCEEECCHHHH
Confidence            9998743211    1111244667776653

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.37  E-value=2.8e-12  Score=114.50  Aligned_cols=104  Identities=31%  Similarity=0.362  Sum_probs=90.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++++..+|+.++++++....||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus       120 l~ivTn~~~~~~~~~l-~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i  198 (272)
T PRK13223        120 MALITNKPERFVAPLL-DQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCV  198 (272)
T ss_pred             EEEEECCcHHHHHHHH-HHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence            4799999999888666 788999999999999998899999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      +|.++......  ...++.+++++.++
T Consensus       199 ~v~~G~~~~~~l~~~~~~~vi~~l~el  225 (272)
T PRK13223        199 ALSYGYNHGRPIAEESPALVIDDLRAL  225 (272)
T ss_pred             EEecCCCCchhhhhcCCCEEECCHHHH
Confidence            99886433222  23567888888775

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.36  E-value=1.8e-12  Score=110.10  Aligned_cols=79  Identities=32%  Similarity=0.421  Sum_probs=71.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||++... ...+ +++|+..+||.++++++++..||+|+.|..++++++++|++|++|||+. .|+++|+++|+.+
T Consensus       124 ~~i~Sn~~~~~-~~~l-~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~  201 (203)
T TIGR02252       124 LGVISNFDSRL-RGLL-EALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRA  201 (203)
T ss_pred             EEEEeCCchhH-HHHH-HHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCee
Confidence            48999998764 5555 8889999999999999999999999999999999999999999999997 7999999999998


Q ss_pred             EE
Q 023972           80 VA   81 (274)
Q Consensus        80 i~   81 (274)
                      ++
T Consensus       202 i~  203 (203)
T TIGR02252       202 LL  203 (203)
T ss_pred             eC
Confidence            74

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.35  E-value=2.9e-12  Score=106.94  Aligned_cols=80  Identities=44%  Similarity=0.617  Sum_probs=72.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+...  ...+ +++|+..+||.++++++....||+|+.|..++++++++|++||||||+..|+++|+++|++++
T Consensus       106 ~~i~s~~~~~--~~~l-~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i  182 (185)
T TIGR01990       106 IALASASKNA--PTVL-EKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV  182 (185)
T ss_pred             EEEEeCCccH--HHHH-HhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEE
Confidence            4789987543  3445 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Eec
Q 023972           81 AVP   83 (274)
Q Consensus        81 ~V~   83 (274)
                      +|.
T Consensus       183 ~v~  185 (185)
T TIGR01990       183 GVG  185 (185)
T ss_pred             ecC
Confidence            873

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.35  E-value=6.5e-12  Score=108.13  Aligned_cols=104  Identities=27%  Similarity=0.416  Sum_probs=90.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+....+...+ +++|+..+|+.+++++++...||+|+.|..++++++++|+++++|||+..|+++|+++|+.++
T Consensus       112 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i  190 (226)
T PRK13222        112 LAVVTNKPTPFVAPLL-EALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSV  190 (226)
T ss_pred             EEEEeCCCHHHHHHHH-HHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEE
Confidence            4799999999888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      ++.++......  ...++.+++++.++
T Consensus       191 ~v~~g~~~~~~~~~~~~~~~i~~~~~l  217 (226)
T PRK13222        191 GVTYGYNYGEPIALSEPDVVIDHFAEL  217 (226)
T ss_pred             EECcCCCCccchhhcCCCEEECCHHHH
Confidence            99886542222  23466888888764

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.33  E-value=1.3e-11  Score=103.13  Aligned_cols=102  Identities=26%  Similarity=0.328  Sum_probs=77.3

Q ss_pred             CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEEec-----------CCCCCCCCCHHHHHHHHHHhCC
Q 023972            1 MALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------DEVRTGKPSPDIFLEAAKRLNM   54 (274)
Q Consensus         1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~~~-----------~~~~~~KP~pe~f~~~l~~l~v   54 (274)
                      ++|+||++.               ..+...+ .++++.  |+.++.+           ++...+||+|++|..+++++++
T Consensus        45 l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~  121 (176)
T TIGR00213        45 LVLVTNQSGIARGYFTEAQFEQLTEWMDWSL-AERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHI  121 (176)
T ss_pred             EEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCc
Confidence            589999985               2333334 555665  7776654           2455789999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCEE-EEecCCCCccccc-ccccEEEeccccc
Q 023972           55 EPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHRY-TAADEVINSLLDL  105 (274)
Q Consensus        55 ~p~~~vvvgD~~~di~aA~~aGi~v-i~V~~~~~~~~~i-Sss~~ii~~l~e~  105 (274)
                      +|++|+||||+..|+++|+++|+.+ +++.++....... ..++.+++++.++
T Consensus       122 ~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el  174 (176)
T TIGR00213       122 DMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL  174 (176)
T ss_pred             ChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence            9999999999999999999999998 7888764322222 3466888877664

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.32  E-value=1.2e-12  Score=108.66  Aligned_cols=74  Identities=19%  Similarity=0.278  Sum_probs=69.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA   75 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a   75 (274)
                      ++|+||+++..+...+ +++|+..+||.|+++++++..||+|+.|..+++++|++|++|+||||+.+|+.+|+++
T Consensus       102 ~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       102 VAILSNASHWAFDQFA-QQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             HhhhhCCCHHHHHHHH-HHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence            5799999999998777 8889999999999999999999999999999999999999999999999999999864

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.31  E-value=4.7e-12  Score=105.68  Aligned_cols=79  Identities=42%  Similarity=0.655  Sum_probs=71.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+  ..+...+ +++|+.++|+.++++++....||+|+.|..++++++++|+++++|||+..|+++|+++|+.++
T Consensus       107 i~i~S~~--~~~~~~l-~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i  183 (185)
T TIGR02009       107 VGLGSSS--KNADRIL-AKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAV  183 (185)
T ss_pred             EEEEeCc--hhHHHHH-HHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEe
Confidence            4789988  4466555 889999999999999999999999999999999999999999999999999999999999998


Q ss_pred             Ee
Q 023972           81 AV   82 (274)
Q Consensus        81 ~V   82 (274)
                      +|
T Consensus       184 ~v  185 (185)
T TIGR02009       184 AV  185 (185)
T ss_pred             eC
Confidence            75

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.30  E-value=4.7e-12  Score=108.29  Aligned_cols=83  Identities=20%  Similarity=0.290  Sum_probs=72.5

Q ss_pred             CEEEcCCChHH--HHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~--~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||+....  ....+ ...++.++||.++++++.+..||+|+.|..++++++++|++|+||||+..|+.+|+++|+.
T Consensus       113 l~i~Sn~~~~~~~~~~~~-~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~  191 (211)
T TIGR02247       113 TACITNNFPTDHSAEEAL-LPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT  191 (211)
T ss_pred             EEEEeCCCCccchhhhHh-hhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence            47999987653  22223 3457889999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecC
Q 023972           79 VVAVPS   84 (274)
Q Consensus        79 vi~V~~   84 (274)
                      ++++..
T Consensus       192 ~i~v~~  197 (211)
T TIGR02247       192 TIKVSD  197 (211)
T ss_pred             EEEECC
Confidence            999965

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK06769 hypothetical protein; Validated

Probab=99.28  E-value=9.4e-12  Score=103.79  Aligned_cols=85  Identities=18%  Similarity=0.255  Sum_probs=67.7

Q ss_pred             CEEEcCCChH--------HHHHHHHHHcCCCCCCcEEE-ecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHH
Q 023972            1 MALASNSHRA--------TIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA   71 (274)
Q Consensus         1 laIvSn~~~~--------~~~~~l~~~~gl~~~Fd~v~-~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~a   71 (274)
                      ++|+||++..        .....+ +.+|+..+|..+. ++++....||+|+.|.+++++++++|++|+||||+..|+++
T Consensus        47 l~I~Tn~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~a  125 (173)
T PRK06769         47 IFSFTNQPGIADGIATIADFVQEL-KGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVA  125 (173)
T ss_pred             EEEEECCchhcCCcCCHHHHHHHH-HhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHH
Confidence            5899998742        122234 5667655543332 45666789999999999999999999999999999999999


Q ss_pred             HHHcCCEEEEecCCC
Q 023972           72 GKAAGMEVVAVPSLP   86 (274)
Q Consensus        72 A~~aGi~vi~V~~~~   86 (274)
                      |+++|+.++++.++.
T Consensus       126 A~~aGi~~i~v~~g~  140 (173)
T PRK06769        126 AAKVNATTILVRTGA  140 (173)
T ss_pred             HHHCCCeEEEEecCC
Confidence            999999999998864

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.26  E-value=2.6e-11  Score=125.97  Aligned_cols=106  Identities=32%  Similarity=0.478  Sum_probs=92.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCC-CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~-~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||+.+..+...| +++|+. .+||.+++++++...||+|++|.+++++++++|++||||||+..|+++|+++||++
T Consensus       180 l~IvSn~~~~~~~~~L-~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~  258 (1057)
T PLN02919        180 VAVASSADRIKVDANL-AAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRC  258 (1057)
T ss_pred             EEEEeCCcHHHHHHHH-HHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEE
Confidence            5899999999998777 888996 79999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCcccc-cccccEEEeccccccc
Q 023972           80 VAVPSLPKQTHR-YTAADEVINSLLDLRP  107 (274)
Q Consensus        80 i~V~~~~~~~~~-iSss~~ii~~l~e~~~  107 (274)
                      +++.+....... ...++.+++++.++..
T Consensus       259 I~v~~~~~~~~L~~~~a~~vi~~l~el~~  287 (1057)
T PLN02919        259 IAVTTTLSEEILKDAGPSLIRKDIGNISL  287 (1057)
T ss_pred             EEECCCCCHHHHhhCCCCEEECChHHCCH
Confidence            999886433222 3456688998877543

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.24  E-value=7.1e-11  Score=98.95  Aligned_cols=102  Identities=29%  Similarity=0.346  Sum_probs=76.5

Q ss_pred             CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEEec-----CCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972            1 MALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DEVRTGKPSPDIFLEAAKRLNMEPSSSL   60 (274)
Q Consensus         1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~~~-----~~~~~~KP~pe~f~~~l~~l~v~p~~~v   60 (274)
                      ++|+||++.               ..+...+ +++|+  +|+.++.+     ++....||+|+.|..++++++++|++|+
T Consensus        48 l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~--~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~  124 (181)
T PRK08942         48 VVVATNQSGIARGLFTEAQLNALHEKMDWSL-ADRGG--RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSP  124 (181)
T ss_pred             EEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEE
Confidence            589999873               2233334 55666  58877764     3457899999999999999999999999


Q ss_pred             EEecCHhhHHHHHHcCCEEEEecCCCCcccc-cccc--cEEEeccccc
Q 023972           61 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAA--DEVINSLLDL  105 (274)
Q Consensus        61 vvgD~~~di~aA~~aGi~vi~V~~~~~~~~~-iSss--~~ii~~l~e~  105 (274)
                      ||||+..|+.+|+++|+.++++.++...... ...+  +.++.++.++
T Consensus       125 ~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el  172 (181)
T PRK08942        125 MVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL  172 (181)
T ss_pred             EEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence            9999999999999999999999875432211 1223  5677777653

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.23  E-value=3.6e-11  Score=101.91  Aligned_cols=73  Identities=26%  Similarity=0.439  Sum_probs=68.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA   75 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a   75 (274)
                      ++|+||+++..+...| +++|+..+|+.++++++... ||+|+.|..++++++++|++|+||||+..|+.+|+++
T Consensus       125 ~~i~T~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       125 MAVVTGRPRKDAAKFL-TTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             EEEECCCCHHHHHHHH-HHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence            5899999999998777 88999999999999999877 9999999999999999999999999999999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.23  E-value=4.4e-11  Score=106.85  Aligned_cols=101  Identities=20%  Similarity=0.281  Sum_probs=85.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+.+..+...+ +++|+.++|+.++++++..   +.|+.|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus       161 laIvSn~~~~~~~~~L-~~~gl~~~F~~vi~~~~~~---~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I  236 (273)
T PRK13225        161 LGILSSNSRQNIEAFL-QRQGLRSLFSVVQAGTPIL---SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAV  236 (273)
T ss_pred             EEEEeCCCHHHHHHHH-HHcCChhheEEEEecCCCC---CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence            5899999999999777 8899999999998887642   34688999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      ++.++......  ...++.+++++.++
T Consensus       237 ~v~~g~~~~~~l~~~~ad~~i~~~~eL  263 (273)
T PRK13225        237 AVTWGFNDRQSLVAACPDWLLETPSDL  263 (273)
T ss_pred             EEecCCCCHHHHHHCCCCEEECCHHHH
Confidence            99887544321  23567899888775

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.23  E-value=9.5e-12  Score=107.75  Aligned_cols=83  Identities=25%  Similarity=0.335  Sum_probs=75.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~v   79 (274)
                      ++++||.+...-  .++..+|+..|||+++.|++.+..||+|++|..+++++++.|++|++|||... |+++|+++|++.
T Consensus       132 l~iisN~d~r~~--~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~a  209 (237)
T KOG3085|consen  132 LGIISNFDDRLR--LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHA  209 (237)
T ss_pred             EEEecCCcHHHH--HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEE
Confidence            478999988854  34478899999999999999999999999999999999999999999999977 899999999999


Q ss_pred             EEecCC
Q 023972           80 VAVPSL   85 (274)
Q Consensus        80 i~V~~~   85 (274)
                      +.|...
T Consensus       210 ilv~~~  215 (237)
T KOG3085|consen  210 ILVDNS  215 (237)
T ss_pred             EEEccc
Confidence            999753

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.22  E-value=3.5e-11  Score=97.57  Aligned_cols=82  Identities=28%  Similarity=0.434  Sum_probs=65.4

Q ss_pred             CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEEe----cCCCCCCCCCHHHHHHHHHHhCCCCCcEEE
Q 023972            1 MALASNSHR---------------ATIESKISYQHGWNESFSVIVG----SDEVRTGKPSPDIFLEAAKRLNMEPSSSLV   61 (274)
Q Consensus         1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~~----~~~~~~~KP~pe~f~~~l~~l~v~p~~~vv   61 (274)
                      ++|+||+++               ..+...+ +++|+... ..+++    +++....||+|++|..++++++++|++|+|
T Consensus        46 ~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~-~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~  123 (147)
T TIGR01656        46 VVVVTNQSGIGRGYFSAEAFRAPNGRVLELL-RQLGVAVD-GVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLV  123 (147)
T ss_pred             EEEEeCCCcccCCcCCHHHHHHHHHHHHHHH-HhCCCcee-EEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            479999874               3444444 77788521 22222    345567899999999999999999999999


Q ss_pred             EecCHhhHHHHHHcCCEEEEecC
Q 023972           62 IEDSVIGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        62 vgD~~~di~aA~~aGi~vi~V~~   84 (274)
                      |||+..|+++|+++|+++++++.
T Consensus       124 IGDs~~Di~~A~~~Gi~~v~i~~  146 (147)
T TIGR01656       124 VGDRLRDLQAARNAGLAAVLLVD  146 (147)
T ss_pred             EcCCHHHHHHHHHCCCCEEEecC
Confidence            99999999999999999999975

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.20  E-value=6.7e-11  Score=113.04  Aligned_cols=101  Identities=17%  Similarity=0.220  Sum_probs=84.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+.+||+.+++++++. .||.|+.|..++++++  |++|++|||+..|+++|+++|+.++
T Consensus       349 l~IvS~~~~~~~~~~l-~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I  424 (459)
T PRK06698        349 IYIASNGLTEYLRAIV-SYYDLDQWVTETFSIEQIN-SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAI  424 (459)
T ss_pred             EEEEeCCchHHHHHHH-HHCCcHhhcceeEecCCCC-CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEE
Confidence            5899999999999877 8899999999999999874 4677889999998874  6899999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++.++.........++.++.++.++
T Consensus       425 ~v~~~~~~~~~~~~~d~~i~~l~el  449 (459)
T PRK06698        425 GCNFDFAQEDELAQADIVIDDLLEL  449 (459)
T ss_pred             EEeCCCCcccccCCCCEEeCCHHHH
Confidence            9988644333334567888887764

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.19  E-value=6.1e-11  Score=102.19  Aligned_cols=105  Identities=46%  Similarity=0.605  Sum_probs=85.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEe--cCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVG--SDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~--~~~~~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++++|++++.+...++..+-++...|+.++.  ..++...||+|+.|+.++++++..| ++|+|++|++.|+++|+++|+
T Consensus       111 ~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm  190 (222)
T KOG2914|consen  111 VALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGM  190 (222)
T ss_pred             eeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCC
Confidence            5899999999999888555458889998888  5688999999999999999999998 999999999999999999999


Q ss_pred             EEEEecCCCCcccccccccEEEeccccc
Q 023972           78 EVVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        78 ~vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      .+++++...........++.+++++.+.
T Consensus       191 ~vi~v~~~~~~~~~~~~~~~~~~~~~~~  218 (222)
T KOG2914|consen  191 QVVGVATPDLSNLFSAGATLILESLEDF  218 (222)
T ss_pred             eEEEecCCCcchhhhhccceeccccccc
Confidence            9999988433332233334555555443

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.18  E-value=1.4e-10  Score=95.73  Aligned_cols=82  Identities=15%  Similarity=0.200  Sum_probs=69.8

Q ss_pred             CEEEcCCC---------------hHHHHHHHHHHcCCCCCCcEEE-e----cCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972            1 MALASNSH---------------RATIESKISYQHGWNESFSVIV-G----SDEVRTGKPSPDIFLEAAKRLNMEPSSSL   60 (274)
Q Consensus         1 laIvSn~~---------------~~~~~~~l~~~~gl~~~Fd~v~-~----~~~~~~~KP~pe~f~~~l~~l~v~p~~~v   60 (274)
                      ++|+||.+               ...+...+ +++|+.  |+.++ +    +++....||+|+.|..++++++++|++++
T Consensus        48 l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l  124 (161)
T TIGR01261        48 FVMVTNQDGLGTPSFPQADFDGPHNLMLQIF-RSQGII--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSY  124 (161)
T ss_pred             EEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHCCCc--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            58999973               44455444 888996  87654 4    47888999999999999999999999999


Q ss_pred             EEecCHhhHHHHHHcCCEEEEecCC
Q 023972           61 VIEDSVIGVVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        61 vvgD~~~di~aA~~aGi~vi~V~~~   85 (274)
                      ||||+..|+++|+++|+.++++.+.
T Consensus       125 ~IGD~~~Di~~A~~aGi~~i~~~~~  149 (161)
T TIGR01261       125 VIGDRETDMQLAENLGIRGIQYDEE  149 (161)
T ss_pred             EEeCCHHHHHHHHHCCCeEEEEChh
Confidence            9999999999999999999999875

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.16  E-value=1.3e-10  Score=94.40  Aligned_cols=72  Identities=31%  Similarity=0.555  Sum_probs=66.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++|+||+.+..+...+ +++ +..+|+.++++++.. .||+|+.|..++++++++| +|++|||+..|+++|+++|
T Consensus        83 ~~i~T~~~~~~~~~~~-~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549        83 LGIISNGSLRAQKLLL-RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             EEEEeCCchHHHHHHH-HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence            4899999999998766 666 888999999999988 9999999999999999999 9999999999999999987

HAD subfamilies caused by an overly broad single model.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.16  E-value=7.3e-11  Score=98.40  Aligned_cols=85  Identities=16%  Similarity=0.032  Sum_probs=73.5

Q ss_pred             CEEEcCC-ChHHHHHHHHHHcCCC---------CCCcEEEecCCCCCCCCCHHHHHHHHHHh--CCCCCcEEEEecCHhh
Q 023972            1 MALASNS-HRATIESKISYQHGWN---------ESFSVIVGSDEVRTGKPSPDIFLEAAKRL--NMEPSSSLVIEDSVIG   68 (274)
Q Consensus         1 laIvSn~-~~~~~~~~l~~~~gl~---------~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l--~v~p~~~vvvgD~~~d   68 (274)
                      ++|+||+ ....+...+ +.+++.         ++|+.++++++....||.++.+..+.+.+  +++|++|+||||+..|
T Consensus        64 l~I~Sn~~~~~~~~~~L-~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~d  142 (174)
T TIGR01685        64 LATASWNDVPEWAYEIL-GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDN  142 (174)
T ss_pred             EEEEeCCCChHHHHHHH-HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHh
Confidence            5899998 788777656 888998         99999999998777788888776666666  7999999999999999


Q ss_pred             HHHHHHcCCEEEEecCCC
Q 023972           69 VVAGKAAGMEVVAVPSLP   86 (274)
Q Consensus        69 i~aA~~aGi~vi~V~~~~   86 (274)
                      +++|+++|+.++++.++.
T Consensus       143 i~aA~~aGi~~i~v~~g~  160 (174)
T TIGR01685       143 VREVWGYGVTSCYCPSGM  160 (174)
T ss_pred             HHHHHHhCCEEEEcCCCc
Confidence            999999999999997753

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.12  E-value=3.5e-10  Score=89.69  Aligned_cols=79  Identities=25%  Similarity=0.509  Sum_probs=66.2

Q ss_pred             CEEEcCCC--------hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHh-CCCCCcEEEEec-CHhhHH
Q 023972            1 MALASNSH--------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIED-SVIGVV   70 (274)
Q Consensus         1 laIvSn~~--------~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l-~v~p~~~vvvgD-~~~di~   70 (274)
                      ++|+||+.        ...+...+ +++++.  |+.++.+.  ...||+|+.|..+++++ +++|++++|||| +..|+.
T Consensus        44 l~i~Sn~~~~~~~~~~~~~~~~~l-~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~  118 (132)
T TIGR01662        44 VVIVTNQSGIGRGKFSSGRVARRL-EELGVP--IDVLYACP--HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQ  118 (132)
T ss_pred             EEEEECCccccccHHHHHHHHHHH-HHCCCC--EEEEEECC--CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHH
Confidence            57999998        77777656 788885  44444444  57899999999999999 599999999999 789999


Q ss_pred             HHHHcCCEEEEecC
Q 023972           71 AGKAAGMEVVAVPS   84 (274)
Q Consensus        71 aA~~aGi~vi~V~~   84 (274)
                      +|+++|+.++++.+
T Consensus       119 ~A~~~Gi~~i~~~~  132 (132)
T TIGR01662       119 AAKRAGLAFILVAP  132 (132)
T ss_pred             HHHHCCCeEEEeeC
Confidence            99999999999863

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.11  E-value=5e-10  Score=96.91  Aligned_cols=83  Identities=17%  Similarity=0.171  Sum_probs=70.3

Q ss_pred             CEEEcCCChHHHHHHHHHHc---CCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~---gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||++.......+ ++.   ++.++|+.++... . ..||+|+.|..++++++++|++|++|||+..|+++|+++|+
T Consensus       114 l~I~Sn~s~~~~~~~~-~~~~~~~L~~~f~~~fd~~-~-g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~  190 (220)
T TIGR01691       114 LAVYSSGSVPAQKLLF-GHSDAGNLTPYFSGYFDTT-V-GLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGL  190 (220)
T ss_pred             EEEEeCCCHHHHHHHH-hhccccchhhhcceEEEeC-c-ccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCC
Confidence            5899999998877655 664   6777888766432 2 37999999999999999999999999999999999999999


Q ss_pred             EEEEecCCC
Q 023972           78 EVVAVPSLP   86 (274)
Q Consensus        78 ~vi~V~~~~   86 (274)
                      .++++.+..
T Consensus       191 ~ti~v~r~g  199 (220)
T TIGR01691       191 HTGQLVRPG  199 (220)
T ss_pred             EEEEEECCC
Confidence            999997643

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.08  E-value=5e-10  Score=80.38  Aligned_cols=68  Identities=32%  Similarity=0.496  Sum_probs=59.1

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEEEEecCCCCcccc----cccccEEEecccc
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLD  104 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~vi~V~~~~~~~~~----iSss~~ii~~l~e  104 (274)
                      .+||+|.+|..+++++++++++++||||+ ..|+++|+++|+.++.|.++....+.    ...++.+++++.+
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e   74 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE   74 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence            57999999999999999999999999999 77999999999999999997654433    2467788888865

...

>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme

Probab=99.03  E-value=9.5e-11  Score=98.38  Aligned_cols=99  Identities=24%  Similarity=0.316  Sum_probs=76.3

Q ss_pred             CcEEEecC-CCCCCCCCHHHHHHH-HHHhCCCCCcEEEEecCHhhH----------HHHHHcCCEEEEecCCCCcccccc
Q 023972           26 FSVIVGSD-EVRTGKPSPDIFLEA-AKRLNMEPSSSLVIEDSVIGV----------VAGKAAGMEVVAVPSLPKQTHRYT   93 (274)
Q Consensus        26 Fd~v~~~~-~~~~~KP~pe~f~~~-l~~l~v~p~~~vvvgD~~~di----------~aA~~aGi~vi~V~~~~~~~~~iS   93 (274)
                      +|.++... +-...+.+|+.|++. +..+  +++.++++.|+.||.          +.+.+.|+.++.++....++..+|
T Consensus        70 vd~v~~~~f~~~~~~~s~~~Fi~~il~~~--~~~~ivvG~Df~FG~~~~g~~~~L~~~~~~~g~~v~~v~~~~~~~~~iS  147 (180)
T cd02064          70 VDYLLVLPFDKEFASLSAEEFVEDLLVKL--NAKHVVVGFDFRFGKGRSGDAELLKELGKKYGFEVTVVPPVTLDGERVS  147 (180)
T ss_pred             CCEEEEeCCCHHHHcCCHHHHHHHHHhhc--CCeEEEEccCCCCCCCCCCCHHHHHHhhhhcCcEEEEeCcEecCCcEEc
Confidence            56655532 323567899999984 4444  557788889998862          346788999999998766666788


Q ss_pred             cccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEec
Q 023972           94 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKG  137 (274)
Q Consensus        94 ss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G  137 (274)
                      |+ .|++.+.++++..          |+.||||||+++|+|+||
T Consensus       148 ST-~IR~~i~~G~i~~----------an~lLg~~y~~~g~V~~G  180 (180)
T cd02064         148 ST-RIREALAEGDVEL----------ANELLGRPYSIEGRVVHG  180 (180)
T ss_pred             HH-HHHHHHHhCCHHH----------HHHHcCCCcEEEEEEeeC
Confidence            85 7778888899986          999999999999999998

FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=98.93  E-value=2.5e-09  Score=88.87  Aligned_cols=80  Identities=18%  Similarity=0.239  Sum_probs=64.8

Q ss_pred             CEEEcCCC-hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCE
Q 023972            1 MALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~-~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~   78 (274)
                      ++|+||++ ...+.. +.+.+|+..++         ...||+|+.|..+++++++++++++||||+. .|+.+|+++|+.
T Consensus        62 l~I~Sn~~~~~~~~~-~~~~~gl~~~~---------~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~  131 (170)
T TIGR01668        62 LLIVSNNAGEQRAKA-VEKALGIPVLP---------HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY  131 (170)
T ss_pred             EEEEeCCchHHHHHH-HHHHcCCEEEc---------CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence            47999998 455543 43666764321         3469999999999999999999999999998 599999999999


Q ss_pred             EEEecCCCCccc
Q 023972           79 VVAVPSLPKQTH   90 (274)
Q Consensus        79 vi~V~~~~~~~~   90 (274)
                      ++++.++.....
T Consensus       132 ~i~v~~g~~~~~  143 (170)
T TIGR01668       132 TILVEPLVHPDQ  143 (170)
T ss_pred             EEEEccCcCCcc
Confidence            999988765443

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.92  E-value=2.9e-09  Score=95.98  Aligned_cols=84  Identities=15%  Similarity=0.080  Sum_probs=75.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCC-CCcEEEecC-------CCCCCCCCHHHHHHHHHHhCC-CCCcEEEEecCHhhHHH
Q 023972            1 MALASNSHRATIESKISYQHGWNE-SFSVIVGSD-------EVRTGKPSPDIFLEAAKRLNM-EPSSSLVIEDSVIGVVA   71 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~-~Fd~v~~~~-------~~~~~KP~pe~f~~~l~~l~v-~p~~~vvvgD~~~di~a   71 (274)
                      ++|+||.+.......+ +.+++.. +|+.+++.+       +....||+|+.+..++++++. .+++|+||||+..|+++
T Consensus       206 i~i~T~r~~~~~~~~l-~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~  284 (300)
T PHA02530        206 IIVVSGRDGVCEEDTV-EWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDM  284 (300)
T ss_pred             EEEEeCCChhhHHHHH-HHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHH
Confidence            4799999999888666 8889987 999999988       455789999999999999888 57999999999999999


Q ss_pred             HHHcCCEEEEecCC
Q 023972           72 GKAAGMEVVAVPSL   85 (274)
Q Consensus        72 A~~aGi~vi~V~~~   85 (274)
                      |+++|+.++.|.++
T Consensus       285 a~~~Gi~~i~v~~g  298 (300)
T PHA02530        285 WRRIGLECWQVAPG  298 (300)
T ss_pred             HHHhCCeEEEecCC
Confidence            99999999999775

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.91  E-value=3.4e-09  Score=87.81  Aligned_cols=78  Identities=15%  Similarity=0.201  Sum_probs=64.4

Q ss_pred             CEEEcCCChH------------HHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC--CCCCcEEEEecCH
Q 023972            1 MALASNSHRA------------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSV   66 (274)
Q Consensus         1 laIvSn~~~~------------~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~--v~p~~~vvvgD~~   66 (274)
                      ++|+||++..            .+...+ +++|+.  ++.++++++....||+|+.|..++++++  +++++++||||+.
T Consensus        61 l~I~TN~~~~~~~~~~~~~~~~~i~~~l-~~~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~  137 (166)
T TIGR01664        61 IVIFTNQSGIGRGKLSAESFKNKIEAFL-EKLKVP--IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA  137 (166)
T ss_pred             EEEEeCCcccccCcccHHHHHHHHHHHH-HHcCCC--EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence            5899998763            344444 888884  3667777766678999999999999999  9999999999996


Q ss_pred             --------hhHHHHHHcCCEEEE
Q 023972           67 --------IGVVAGKAAGMEVVA   81 (274)
Q Consensus        67 --------~di~aA~~aGi~vi~   81 (274)
                              .|+++|+++|+.+++
T Consensus       138 ~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       138 GRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             CCCCCCchhHHHHHHHCCCCcCC
Confidence                    599999999998864

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=98.91  E-value=1.4e-09  Score=88.28  Aligned_cols=76  Identities=12%  Similarity=-0.011  Sum_probs=68.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCC-CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~-~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||+.+..+...+ +++++.. +|+.+++++++...||.   |++++++++.+|++||||||+..|+.+|.++|+.+
T Consensus        63 l~I~Ts~~~~~~~~il-~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i  138 (148)
T smart00577       63 LVVFTAGLRMYADPVL-DLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI  138 (148)
T ss_pred             EEEEeCCcHHHHHHHH-HHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence            5899999999999766 8888865 56999999999999997   88999999999999999999999999999998765


Q ss_pred             E
Q 023972           80 V   80 (274)
Q Consensus        80 i   80 (274)
                      -
T Consensus       139 ~  139 (148)
T smart00577      139 K  139 (148)
T ss_pred             c
Confidence            3

>PHA02597 30

Probab=98.91  E-value=3.1e-09  Score=89.90  Aligned_cols=96  Identities=13%  Similarity=0.133  Sum_probs=71.7

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCC----CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc--
Q 023972            2 ALASNSHRATIESKISYQHGWNE----SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--   75 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~----~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a--   75 (274)
                      .++||++.......+ +++++..    +|+.++++++.   ||+|+.|..++++++  |+++++|||+..|+++|+++  
T Consensus        93 ~i~Tn~~~~~~~~~~-~~~~l~~~f~~~f~~i~~~~~~---~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~  166 (197)
T PHA02597         93 VAVTALGDSIDALLN-RQFNLNALFPGAFSEVLMCGHD---ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALS  166 (197)
T ss_pred             EEEeCCccchhHHHH-hhCCHHHhCCCcccEEEEeccC---cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHc
Confidence            577887766554333 6677764    56778887773   667899999999999  78999999999999999999  


Q ss_pred             CCEEEEecCCCCcccccccccEEEeccccc
Q 023972           76 GMEVVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        76 Gi~vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      |++++++.++..  .....+++++.++.++
T Consensus       167 Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~  194 (197)
T PHA02597        167 QLPVIHMLRGER--DHIPKLAHRVKSWNDI  194 (197)
T ss_pred             CCcEEEecchhh--ccccchhhhhccHHHH
Confidence            999999988754  2222333566666553

2 hypothetical protein; Provisional

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.90  E-value=5.5e-10  Score=100.01  Aligned_cols=104  Identities=25%  Similarity=0.320  Sum_probs=76.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEe---cCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVG---SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~---~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aG   76 (274)
                      ++|+||.+............++..+|+.+.+   .+....+||+|+.|..++++++++|++++||||+. .|+++|+++|
T Consensus       161 ~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aG  240 (279)
T TIGR01452       161 LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCG  240 (279)
T ss_pred             EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcC
Confidence            3689998875432111134466667776543   34456789999999999999999999999999995 7999999999


Q ss_pred             CEEEEecCCCCccccc----------ccccEEEecccc
Q 023972           77 MEVVAVPSLPKQTHRY----------TAADEVINSLLD  104 (274)
Q Consensus        77 i~vi~V~~~~~~~~~i----------Sss~~ii~~l~e  104 (274)
                      +.++.|.++....+..          ..++++++++.+
T Consensus       241 i~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~  278 (279)
T TIGR01452       241 MTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLAD  278 (279)
T ss_pred             CcEEEECCCCCCHHHHHhhhcccccCCCCCEEeccccc
Confidence            9999998875433221          235677776654

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.89  E-value=6.1e-09  Score=88.15  Aligned_cols=82  Identities=21%  Similarity=0.325  Sum_probs=75.1

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC------CCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHH
Q 023972            2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVR------TGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKA   74 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~------~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~   74 (274)
                      -+.||+.+..+...| +.+|+.++||.++|++-..      ..||+++.|..+++..|++ |.++++++|+...+++|++
T Consensus       118 ~~FTNa~k~HA~r~L-k~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~  196 (244)
T KOG3109|consen  118 WIFTNAYKVHAIRIL-KKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKE  196 (244)
T ss_pred             EEecCCcHHHHHHHH-HHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHh
Confidence            478999999999888 8999999999999987433      5799999999999999998 9999999999999999999


Q ss_pred             cCCEEEEecC
Q 023972           75 AGMEVVAVPS   84 (274)
Q Consensus        75 aGi~vi~V~~   84 (274)
                      .|+.++++..
T Consensus       197 vGl~tvlv~~  206 (244)
T KOG3109|consen  197 VGLKTVLVGR  206 (244)
T ss_pred             ccceeEEEEe
Confidence            9999998865

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.84  E-value=1.1e-09  Score=97.02  Aligned_cols=104  Identities=20%  Similarity=0.221  Sum_probs=79.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC---CCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~---~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aG   76 (274)
                      ++|+||.++......+ ...|+..+|+.+.++....   .+||+|++|..++++++++|++++||||+. .|+.+|+++|
T Consensus       139 ~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G  217 (257)
T TIGR01458       139 LLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCG  217 (257)
T ss_pred             EEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcC
Confidence            3678888777655444 5567888888777654433   379999999999999999999999999996 7999999999


Q ss_pred             CEEEEecCCCCccc----ccccccEEEeccccc
Q 023972           77 MEVVAVPSLPKQTH----RYTAADEVINSLLDL  105 (274)
Q Consensus        77 i~vi~V~~~~~~~~----~iSss~~ii~~l~e~  105 (274)
                      +.+++|.++.....    ....++.+++++.++
T Consensus       218 ~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el  250 (257)
T TIGR01458       218 MRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA  250 (257)
T ss_pred             CeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence            99999988642111    123456778777654

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=98.79  E-value=3.4e-08  Score=91.05  Aligned_cols=82  Identities=16%  Similarity=0.224  Sum_probs=67.2

Q ss_pred             CEEEcCC---------------ChHHHHHHHHHHcCCCCCCcEEE-e----cCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972            1 MALASNS---------------HRATIESKISYQHGWNESFSVIV-G----SDEVRTGKPSPDIFLEAAKRLNMEPSSSL   60 (274)
Q Consensus         1 laIvSn~---------------~~~~~~~~l~~~~gl~~~Fd~v~-~----~~~~~~~KP~pe~f~~~l~~l~v~p~~~v   60 (274)
                      ++|+||.               ....+...+ +.+++  +|+.++ +    +++...+||+|++|..++++++++|++++
T Consensus        49 L~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL-~~~gl--~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~sv  125 (354)
T PRK05446         49 LVMVTNQDGLGTDSFPQEDFDPPHNLMMQIF-ESQGI--KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSY  125 (354)
T ss_pred             EEEEECCccccCccccHHHHhhHHHHHHHHH-HHcCC--ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            5799995               244444434 77788  477654 3    35667899999999999999999999999


Q ss_pred             EEecCHhhHHHHHHcCCEEEEecCC
Q 023972           61 VIEDSVIGVVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        61 vvgD~~~di~aA~~aGi~vi~V~~~   85 (274)
                      ||||+..|+++|+++|++++++++.
T Consensus       126 mIGDs~sDi~aAk~aGi~~I~v~~~  150 (354)
T PRK05446        126 VIGDRETDVQLAENMGIKGIRYARE  150 (354)
T ss_pred             EEcCCHHHHHHHHHCCCeEEEEECC
Confidence            9999999999999999999999764

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=98.73  E-value=2.3e-08  Score=83.09  Aligned_cols=74  Identities=11%  Similarity=0.205  Sum_probs=66.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+..+|+.+         ||+|+.|..+++++++++++++++||+.+|+.+++.+|+.+.
T Consensus        53 laIiT~k~~~~~~~~l-~~lgi~~~f~~~---------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a  122 (169)
T TIGR02726        53 VAIITSKKSGAVRHRA-EELKIKRFHEGI---------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA  122 (169)
T ss_pred             EEEEECCCcHHHHHHH-HHCCCcEEEecC---------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence            5899999999998767 889999888742         799999999999999999999999999999999999999876


Q ss_pred             EecC
Q 023972           81 AVPS   84 (274)
Q Consensus        81 ~V~~   84 (274)
                      .-+.
T Consensus       123 m~nA  126 (169)
T TIGR02726       123 VGDA  126 (169)
T ss_pred             CcCc
Confidence            6544

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PLN02645 phosphoglycolate phosphatase

Probab=98.73  E-value=2.4e-09  Score=97.38  Aligned_cols=104  Identities=21%  Similarity=0.254  Sum_probs=78.9

Q ss_pred             CEEEcCCChHH-HHHHHHHHcCCCCCCcEEEecCCCC---CCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHc
Q 023972            1 MALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAA   75 (274)
Q Consensus         1 laIvSn~~~~~-~~~~l~~~~gl~~~Fd~v~~~~~~~---~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~a   75 (274)
                      +.|+||.+... ....+ ...|...+|+.+.++....   .+||+|.+|..+++++++++++++||||+. .|+++|+++
T Consensus       189 ~~i~tn~d~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~a  267 (311)
T PLN02645        189 LFIATNRDAVTHLTDAQ-EWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNG  267 (311)
T ss_pred             EEEEeCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHc
Confidence            36889988753 22222 4457777888877766533   369999999999999999999999999997 899999999


Q ss_pred             CCEEEEecCCCCccccc------ccccEEEeccccc
Q 023972           76 GMEVVAVPSLPKQTHRY------TAADEVINSLLDL  105 (274)
Q Consensus        76 Gi~vi~V~~~~~~~~~i------Sss~~ii~~l~e~  105 (274)
                      |+++++|.++.......      ..++.+++++.++
T Consensus       268 G~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l  303 (311)
T PLN02645        268 GCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF  303 (311)
T ss_pred             CCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence            99999998875433221      2356788777654

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=98.71  E-value=4e-08  Score=79.97  Aligned_cols=79  Identities=25%  Similarity=0.424  Sum_probs=67.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~v   79 (274)
                      +.|+||..+.-+.... +.+|+    +++.     ...||.+..|.++++++++++++|+||||..+ |+.+|+.+|+++
T Consensus        65 v~vvSNn~e~RV~~~~-~~l~v----~fi~-----~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~t  134 (175)
T COG2179          65 VVVVSNNKESRVARAA-EKLGV----PFIY-----RAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRT  134 (175)
T ss_pred             EEEEeCCCHHHHHhhh-hhcCC----ceee-----cccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEE
Confidence            3689999999888655 77776    3333     56899999999999999999999999999998 999999999999


Q ss_pred             EEecCCCCcc
Q 023972           80 VAVPSLPKQT   89 (274)
Q Consensus        80 i~V~~~~~~~   89 (274)
                      |.|.+....+
T Consensus       135 IlV~Pl~~~d  144 (175)
T COG2179         135 ILVEPLVAPD  144 (175)
T ss_pred             EEEEEecccc
Confidence            9998864433

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.65  E-value=1.4e-07  Score=82.41  Aligned_cols=78  Identities=13%  Similarity=0.098  Sum_probs=64.2

Q ss_pred             CEEEcCC----ChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNS----HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~----~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++|+||+    .+..+.. +++++|+..+|+.++++++....||+|+.   +++++++    ++++||+..|+.+|+++|
T Consensus       133 i~iVTnr~~~k~~~~a~~-ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~---~l~~~~i----~i~vGDs~~DI~aAk~AG  204 (237)
T TIGR01672       133 IFFVTGRTPGKTDTVSKT-LAKNFHIPAMNPVIFAGDKPGQYQYTKTQ---WIQDKNI----RIHYGDSDNDITAAKEAG  204 (237)
T ss_pred             EEEEeCCCCCcCHHHHHH-HHHHhCCchheeEEECCCCCCCCCCCHHH---HHHhCCC----eEEEeCCHHHHHHHHHCC
Confidence            5799998    5555554 55889999999999999988788898864   4455654    799999999999999999


Q ss_pred             CEEEEecCCC
Q 023972           77 MEVVAVPSLP   86 (274)
Q Consensus        77 i~vi~V~~~~   86 (274)
                      ++++.+.++.
T Consensus       205 i~~I~V~~g~  214 (237)
T TIGR01672       205 ARGIRILRAS  214 (237)
T ss_pred             CCEEEEEecC
Confidence            9999998754

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.64  E-value=1.1e-07  Score=73.91  Aligned_cols=81  Identities=33%  Similarity=0.463  Sum_probs=72.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCC----------------CCCHHHHHHHHHHhCCCCCcEEEEec
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------------KPSPDIFLEAAKRLNMEPSSSLVIED   64 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~----------------KP~pe~f~~~l~~l~v~p~~~vvvgD   64 (274)
                      ++|+||+.+..+...+ +.+++..+|+.++++......                ||.++.+..++++++.++++++++||
T Consensus        43 i~ivS~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD  121 (139)
T cd01427          43 LALATNKSRREVLELL-EELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGD  121 (139)
T ss_pred             EEEEeCchHHHHHHHH-HHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCC
Confidence            4799999999998777 778998899999988765555                99999999999999998999999999


Q ss_pred             CHhhHHHHHHcCCEEEEe
Q 023972           65 SVIGVVAGKAAGMEVVAV   82 (274)
Q Consensus        65 ~~~di~aA~~aGi~vi~V   82 (274)
                      +..|+++++++|+.+++|
T Consensus       122 ~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         122 SLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             CHHHHHHHHHcCCceeeC
Confidence            999999999999998764

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.55  E-value=2.6e-07  Score=77.89  Aligned_cols=83  Identities=13%  Similarity=0.038  Sum_probs=67.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCH----------HHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP----------DIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~p----------e~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+||+....+...+ +++|+..+|+.++..++.+..+|++          +.+..+++++++++++++++||+..|+.
T Consensus        99 ~~IvS~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~  177 (201)
T TIGR01491        99 TAIVSGGIMCLAKKVA-EKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLP  177 (201)
T ss_pred             EEEEeCCcHHHHHHHH-HHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHH
Confidence            4799999999888766 8889988888777665544444432          5677788889999999999999999999


Q ss_pred             HHHHcCCEEEEecC
Q 023972           71 AGKAAGMEVVAVPS   84 (274)
Q Consensus        71 aA~~aGi~vi~V~~   84 (274)
                      +|+.+|+.++..+.
T Consensus       178 ~a~~ag~~~a~~~~  191 (201)
T TIGR01491       178 MFEVADISISLGDE  191 (201)
T ss_pred             HHHhcCCeEEECCC
Confidence            99999998766554

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.53  E-value=3.1e-08  Score=87.29  Aligned_cols=78  Identities=27%  Similarity=0.393  Sum_probs=61.0

Q ss_pred             CcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEEEEecCCCCccccc----ccccEEEe
Q 023972           26 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVIN  100 (274)
Q Consensus        26 Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~vi~V~~~~~~~~~i----Sss~~ii~  100 (274)
                      ++.+.+.+.+...||+|++|..+++++++++++++||||+. .|+.+|+++|+++++|.++.......    ..++.+++
T Consensus       165 i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~  244 (249)
T TIGR01457       165 LEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVS  244 (249)
T ss_pred             HHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeC
Confidence            44455556667789999999999999999999999999997 69999999999999998875432211    23456666


Q ss_pred             ccc
Q 023972          101 SLL  103 (274)
Q Consensus       101 ~l~  103 (274)
                      ++.
T Consensus       245 ~l~  247 (249)
T TIGR01457       245 SLA  247 (249)
T ss_pred             Chh
Confidence            554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.53  E-value=1.5e-07  Score=74.48  Aligned_cols=69  Identities=22%  Similarity=0.171  Sum_probs=58.3

Q ss_pred             CEEEcCC-ChHHHHHHHHHHcC-------CCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC--CCCCcEEEEecCHhhHH
Q 023972            1 MALASNS-HRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~-~~~~~~~~l~~~~g-------l~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~--v~p~~~vvvgD~~~di~   70 (274)
                      ++|+||+ .+..+...+ ++++       +.++|+.++++++    +|+|+.|..+++++|  +.|++|+||||+..++.
T Consensus        48 l~i~Sn~~~~~~~~~~l-~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~  122 (128)
T TIGR01681        48 LALASYNDDPHVAYELL-KIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNE  122 (128)
T ss_pred             EEEEeCCCCHHHHHHHH-HhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHH
Confidence            5899999 777666555 7778       8899999988864    588999999999999  99999999999999877


Q ss_pred             HHHH
Q 023972           71 AGKA   74 (274)
Q Consensus        71 aA~~   74 (274)
                      ..++
T Consensus       123 ~~~~  126 (128)
T TIGR01681       123 EVDY  126 (128)
T ss_pred             HHHh
Confidence            6544

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.51  E-value=4.9e-08  Score=85.52  Aligned_cols=81  Identities=25%  Similarity=0.395  Sum_probs=66.4

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCCCCcEE--EecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecC-HhhHHHHHHcCC
Q 023972            2 ALASNSHRATIESKISYQHGWNESFSVI--VGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDS-VIGVVAGKAAGM   77 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v--~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~-~~di~aA~~aGi   77 (274)
                      .|+||.+.......+ .+.+...+|..+  .+.+....+||+|++|..++++++.. +++++||||+ ..|+.+|+++|+
T Consensus       157 ~i~tN~d~~~~~~~~-~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~  235 (242)
T TIGR01459       157 NICANPDRGINQHGI-YRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGI  235 (242)
T ss_pred             EEEECCCEeccCCCc-eEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCC
Confidence            378999888775444 666777777754  56666668999999999999999875 5789999999 589999999999


Q ss_pred             EEEEec
Q 023972           78 EVVAVP   83 (274)
Q Consensus        78 ~vi~V~   83 (274)
                      .+++|.
T Consensus       236 ~~i~v~  241 (242)
T TIGR01459       236 DTALVL  241 (242)
T ss_pred             eEEEEe
Confidence            999874

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.51  E-value=5.9e-07  Score=77.05  Aligned_cols=80  Identities=15%  Similarity=0.197  Sum_probs=64.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEE-------ec---CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIV-------GS---DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~-------~~---~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+||+....+...+ +++|+..+|+..+       ++   ......+|.|+.|..++++++++|++|++|||+..|+.
T Consensus       104 ~~IvS~~~~~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~  182 (219)
T TIGR00338       104 VAVISGGFDLFAEHVK-DKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLS  182 (219)
T ss_pred             EEEECCCcHHHHHHHH-HHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHH
Confidence            4899999999888666 8889988885322       11   12233567899999999999999999999999999999


Q ss_pred             HHHHcCCEEEE
Q 023972           71 AGKAAGMEVVA   81 (274)
Q Consensus        71 aA~~aGi~vi~   81 (274)
                      +|+++|+.+..
T Consensus       183 aa~~ag~~i~~  193 (219)
T TIGR00338       183 MIKAAGLGIAF  193 (219)
T ss_pred             HHHhCCCeEEe
Confidence            99999998643

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.50  E-value=2.3e-07  Score=75.78  Aligned_cols=89  Identities=18%  Similarity=0.199  Sum_probs=69.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +++|+..+|+.         .+|.|+.+.++++++++++++|+++||+.+|+.+++++|+. +
T Consensus        47 i~IvTn~~~~~~~~~l-~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~  115 (154)
T TIGR01670        47 VAIITGRKAKLVEDRC-KTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-V  115 (154)
T ss_pred             EEEEECCCCHHHHHHH-HHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-E
Confidence            4799999999888766 88899877752         27889999999999999999999999999999999999998 5


Q ss_pred             EecCCCCcccccccccEEEecc
Q 023972           81 AVPSLPKQTHRYTAADEVINSL  102 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l  102 (274)
                      .+.....  .....++.++.+.
T Consensus       116 ~v~~~~~--~~~~~a~~i~~~~  135 (154)
T TIGR01670       116 AVADAHP--LLIPRADYVTRIA  135 (154)
T ss_pred             ecCCcCH--HHHHhCCEEecCC
Confidence            5544322  2223344555443

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK10444 UMP phosphatase; Provisional

Probab=98.45  E-value=1.8e-07  Score=82.42  Aligned_cols=77  Identities=25%  Similarity=0.371  Sum_probs=62.1

Q ss_pred             EEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEEEEecCCCCccccc----ccccEEEeccc
Q 023972           29 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLL  103 (274)
Q Consensus        29 v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~vi~V~~~~~~~~~i----Sss~~ii~~l~  103 (274)
                      +.+.+....+||+|++|..++++++++|++++||||+. .|+.+|+++|+.+++|.++.......    ..++.+++++.
T Consensus       164 ~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~  243 (248)
T PRK10444        164 ISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVA  243 (248)
T ss_pred             HhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHH
Confidence            34444555689999999999999999999999999997 79999999999999998875443322    34667888776


Q ss_pred             cc
Q 023972          104 DL  105 (274)
Q Consensus       104 e~  105 (274)
                      ++
T Consensus       244 el  245 (248)
T PRK10444        244 DI  245 (248)
T ss_pred             Hh
Confidence            64

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.35  E-value=1e-06  Score=74.00  Aligned_cols=70  Identities=17%  Similarity=0.299  Sum_probs=60.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +.+|+..+|+   +      .++.++.+..+++++++++++++||||+..|+.+++++|+.++
T Consensus        67 v~I~T~~~~~~v~~~l-~~lgl~~~f~---g------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~  136 (183)
T PRK09484         67 VAIITGRKSKLVEDRM-TTLGITHLYQ---G------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA  136 (183)
T ss_pred             EEEEeCCCcHHHHHHH-HHcCCceeec---C------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence            4799999999888666 8889887775   1      2456799999999999999999999999999999999999954

>TIGR01686 FkbH FkbH-like domain

Probab=98.31  E-value=1.6e-06  Score=79.14  Aligned_cols=72  Identities=22%  Similarity=0.158  Sum_probs=64.6

Q ss_pred             CEEEcCCChHHHHHHHHHH----cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQ----HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~----~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++|+||+++..+...| ++    +++.++|+.+.+.     +||+|+.+..+++++++.++++|+|||+.+++..++++.
T Consensus        50 lai~S~n~~~~a~~~l-~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~l  123 (320)
T TIGR01686        50 LALASKNDEDDAKKVF-ERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITL  123 (320)
T ss_pred             EEEEcCCCHHHHHHHH-HhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHC
Confidence            5899999999998777 77    7899999988665     689999999999999999999999999999999999877


Q ss_pred             CE
Q 023972           77 ME   78 (274)
Q Consensus        77 i~   78 (274)
                      -.
T Consensus       124 p~  125 (320)
T TIGR01686       124 PV  125 (320)
T ss_pred             CC
Confidence            64

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.23  E-value=7.2e-06  Score=71.71  Aligned_cols=77  Identities=14%  Similarity=0.186  Sum_probs=60.2

Q ss_pred             CEEEcCCC----hHHHHHHHHHHcCC--CCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHH
Q 023972            1 MALASNSH----RATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA   74 (274)
Q Consensus         1 laIvSn~~----~~~~~~~l~~~~gl--~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~   74 (274)
                      ++++||.+    ...+. .|.+.+|+  .++|+.+++.++.  .||++..   .++++++    ++++||+..|+.+|++
T Consensus       133 I~iVTnR~~~k~~~t~~-~Llk~~gip~~~~f~vil~gd~~--~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~  202 (237)
T PRK11009        133 IYFITGRTATKTETVSK-TLADDFHIPADNMNPVIFAGDKP--GQYTKTQ---WLKKKNI----RIFYGDSDNDITAARE  202 (237)
T ss_pred             EEEEeCCCCcccHHHHH-HHHHHcCCCcccceeEEEcCCCC--CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHH
Confidence            57899953    44444 56577899  8999999988763  6788765   4445554    8999999999999999


Q ss_pred             cCCEEEEecCCCC
Q 023972           75 AGMEVVAVPSLPK   87 (274)
Q Consensus        75 aGi~vi~V~~~~~   87 (274)
                      +|+.++.+.++..
T Consensus       203 AGi~~I~v~~G~~  215 (237)
T PRK11009        203 AGARGIRILRAAN  215 (237)
T ss_pred             cCCcEEEEecCCC
Confidence            9999999988643

>PLN02954 phosphoserine phosphatase

Probab=98.19  E-value=8e-06  Score=70.24  Aligned_cols=102  Identities=16%  Similarity=0.126  Sum_probs=69.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCC--CCCcEEE-e-------cCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH
Q 023972            1 MALASNSHRATIESKISYQHGWN--ESFSVIV-G-------SDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV   66 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~--~~Fd~v~-~-------~~~----~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~   66 (274)
                      ++|+|++.+..+...+ +.+|+.  .+|+..+ .       +.+    ....++.|+.+..++++++.  +++++|||+.
T Consensus       103 ~~IvS~~~~~~i~~~l-~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~  179 (224)
T PLN02954        103 VYLVSGGFRQMIAPVA-AILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGA  179 (224)
T ss_pred             EEEECCCcHHHHHHHH-HHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCH
Confidence            4799999999998766 888986  3564311 1       111    12356778888888888875  6999999999


Q ss_pred             hhHHHHHHcCCEEEEecCCCCccc-ccccccEEEeccccc
Q 023972           67 IGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDL  105 (274)
Q Consensus        67 ~di~aA~~aGi~vi~V~~~~~~~~-~iSss~~ii~~l~e~  105 (274)
                      .|+.+|+++|+.++....+..... ....++.++.++.++
T Consensus       180 ~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el  219 (224)
T PLN02954        180 TDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL  219 (224)
T ss_pred             HHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence            999999998888766533222111 123356777777653

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.12  E-value=6.1e-06  Score=71.11  Aligned_cols=77  Identities=14%  Similarity=0.087  Sum_probs=60.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCC--CC--cEEEecCCCCCCCCCHHH----------HHHHHHHhCCCCCcEEEEecCH
Q 023972            1 MALASNSHRATIESKISYQHGWNE--SF--SVIVGSDEVRTGKPSPDI----------FLEAAKRLNMEPSSSLVIEDSV   66 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~--~F--d~v~~~~~~~~~KP~pe~----------f~~~l~~l~v~p~~~vvvgD~~   66 (274)
                      ++|+||+.+..+...| +++ +..  .+  +..+.++.....||+|..          ...++++++..+.++++|||+.
T Consensus        93 ~~IvS~~~~~~i~~il-~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~  170 (219)
T PRK09552         93 FYVVSGGMDFFVYPLL-QGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSI  170 (219)
T ss_pred             EEEECCCcHHHHHHHH-HHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCH
Confidence            5899999999888766 666 543  22  344555666677888764          3568888999999999999999


Q ss_pred             hhHHHHHHcCCEE
Q 023972           67 IGVVAGKAAGMEV   79 (274)
Q Consensus        67 ~di~aA~~aGi~v   79 (274)
                      .|+.+|+++|+.+
T Consensus       171 ~Di~aa~~Ag~~~  183 (219)
T PRK09552        171 TDLEAAKQADKVF  183 (219)
T ss_pred             HHHHHHHHCCcce
Confidence            9999999999943

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=98.08  E-value=1e-05  Score=68.54  Aligned_cols=70  Identities=34%  Similarity=0.488  Sum_probs=58.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++|+|+.....+.... +.+|+   ++.++.+...  .||++..|.++++.++.++.+++|+||..+|+.+++++|
T Consensus       146 ~~i~TGD~~~~a~~~~-~~lgi---~~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  146 VAILTGDNESTASAIA-KQLGI---FDSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             EEEEESSEHHHHHHHH-HHTTS---CSEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred             eeeeeccccccccccc-ccccc---cccccccccc--ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence            4789999888888655 78899   4444443332  799999999999999999999999999999999999986

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.01  E-value=1.8e-05  Score=67.07  Aligned_cols=79  Identities=18%  Similarity=0.151  Sum_probs=57.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC-C---CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSD-E---VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~-~---~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++|+||+....+...+ +++|+..+|+..+... +   .+..++.|.....++++++..+.++++|||+.+|+.+++++|
T Consensus        86 ~~IvS~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~  164 (205)
T PRK13582         86 VVILSDTFYEFAGPLM-RQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEAD  164 (205)
T ss_pred             EEEEeCCcHHHHHHHH-HHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCC
Confidence            4799999999998766 8889998887544332 1   112223344445566666667789999999999999999999


Q ss_pred             CEEE
Q 023972           77 MEVV   80 (274)
Q Consensus        77 i~vi   80 (274)
                      +.+.
T Consensus       165 ~~v~  168 (205)
T PRK13582        165 AGIL  168 (205)
T ss_pred             CCEE
Confidence            8653

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=97.99  E-value=1.5e-05  Score=77.11  Aligned_cols=73  Identities=22%  Similarity=0.304  Sum_probs=58.5

Q ss_pred             CEEEcCCCh------------HHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC----CCCCcEEEEec
Q 023972            1 MALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN----MEPSSSLVIED   64 (274)
Q Consensus         1 laIvSn~~~------------~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~----v~p~~~vvvgD   64 (274)
                      ++|+||...            ..+...+ +++|+.  |+.+++.++...+||.|.++..++++++    +++++++||||
T Consensus       216 IvIvTNQ~gI~~G~~~~~~~~~ki~~iL-~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGD  292 (526)
T TIGR01663       216 ICIFTNQGGIARGKINADDFKAKIEAIV-AKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGD  292 (526)
T ss_pred             EEEEECCcccccCcccHHHHHHHHHHHH-HHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCC
Confidence            579999776            3355444 778884  9999988888899999999999999885    88999999999


Q ss_pred             CHhhHHHHHHcC
Q 023972           65 SVIGVVAGKAAG   76 (274)
Q Consensus        65 ~~~di~aA~~aG   76 (274)
                      ...++++|+.+|
T Consensus       293 aagr~~~g~~ag  304 (526)
T TIGR01663       293 AAGRPANGKAAG  304 (526)
T ss_pred             cccchHHHHhcC
Confidence            987766655444

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.99  E-value=1.9e-05  Score=65.55  Aligned_cols=74  Identities=15%  Similarity=0.145  Sum_probs=56.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCC--------------------CCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRTGKPSPDIFLEAAKRLNMEPSSSL   60 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~--------------------~~~~KP~pe~f~~~l~~l~v~p~~~v   60 (274)
                      ++|+||+....+...+ +++|+.++|+.+++++.                    ...+.+.++.+..+..+.   +.+++
T Consensus        91 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~---~~~~i  166 (188)
T TIGR01489        91 FIVISDGNDFFIDPVL-EGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPK---YQHII  166 (188)
T ss_pred             EEEEeCCcHHHHHHHH-HHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCHHHHHHHHHhhc---CceEE
Confidence            4799999999888766 88899999999997543                    112223466776665543   68999


Q ss_pred             EEecCHhhHHHHHHcCCE
Q 023972           61 VIEDSVIGVVAGKAAGME   78 (274)
Q Consensus        61 vvgD~~~di~aA~~aGi~   78 (274)
                      ++||+..|+.+|+++++-
T Consensus       167 ~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       167 YIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             EECCCcchhchHhcCCcc
Confidence            999999999999998653

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=97.98  E-value=4e-05  Score=64.06  Aligned_cols=61  Identities=28%  Similarity=0.367  Sum_probs=54.2

Q ss_pred             CCcEEEecC-----CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCC
Q 023972           25 SFSVIVGSD-----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        25 ~Fd~v~~~~-----~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~   85 (274)
                      .||.++.+-     .+..+||.|.++..+++++++++.+.+||||...|+++|.++|+..+.+..+
T Consensus        86 ~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~  151 (181)
T COG0241          86 KIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTG  151 (181)
T ss_pred             ccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence            688888773     3678999999999999999999999999999999999999999997666554

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=97.91  E-value=4.2e-05  Score=69.97  Aligned_cols=80  Identities=14%  Similarity=0.179  Sum_probs=63.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCc-------EEEecC---CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFS-------VIVGSD---EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd-------~v~~~~---~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+|++....++. +.+++|+...+.       ..+++.   +...+||+++.+.++++++|+++++|+++||+.+|+.
T Consensus       200 ~aIvSgg~~~~~~~-l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~  278 (322)
T PRK11133        200 VAIASGGFTYFADY-LRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLP  278 (322)
T ss_pred             EEEEECCcchhHHH-HHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHH
Confidence            47999999887775 447888865442       112221   2335789999999999999999999999999999999


Q ss_pred             HHHHcCCEEEE
Q 023972           71 AGKAAGMEVVA   81 (274)
Q Consensus        71 aA~~aGi~vi~   81 (274)
                      +++.+|+.+..
T Consensus       279 m~~~AGlgiA~  289 (322)
T PRK11133        279 MIKAAGLGIAY  289 (322)
T ss_pred             HHHHCCCeEEe
Confidence            99999998876

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=97.91  E-value=2.6e-05  Score=67.00  Aligned_cols=76  Identities=16%  Similarity=0.098  Sum_probs=58.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC---cEEEecCCCCCCCCCHHHH----------HHHHHHhCCCCCcEEEEecCHh
Q 023972            1 MALASNSHRATIESKISYQHGWNESF---SVIVGSDEVRTGKPSPDIF----------LEAAKRLNMEPSSSLVIEDSVI   67 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F---d~v~~~~~~~~~KP~pe~f----------~~~l~~l~v~p~~~vvvgD~~~   67 (274)
                      ++|+|++....+...+ ++++...++   +.++..+.....||+|+.+          ..++++++..+.++++|||+..
T Consensus        89 ~~IvS~~~~~~i~~il-~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~  167 (214)
T TIGR03333        89 FYVISGGMDFFVYPLL-EGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVT  167 (214)
T ss_pred             EEEECCCcHHHHHHHH-HhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHH
Confidence            4899999999888766 665544444   3455555566778888776          3677777778899999999999


Q ss_pred             hHHHHHHcCC
Q 023972           68 GVVAGKAAGM   77 (274)
Q Consensus        68 di~aA~~aGi   77 (274)
                      |+.+|+.+|+
T Consensus       168 D~~~a~~Ad~  177 (214)
T TIGR03333       168 DVEAAKQSDL  177 (214)
T ss_pred             HHHHHHhCCe
Confidence            9999999997

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=97.87  E-value=1.3e-05  Score=69.95  Aligned_cols=49  Identities=29%  Similarity=0.554  Sum_probs=45.0

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcE-EEEecCH-hhHHHHHHcCCEEEEecC
Q 023972           36 RTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSV-IGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        36 ~~~KP~pe~f~~~l~~l~v~p~~~-vvvgD~~-~di~aA~~aGi~vi~V~~   84 (274)
                      ...||+|++|..+++++++++.++ +||||+. .|+++|+++|+++++|.+
T Consensus       185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~  235 (236)
T TIGR01460       185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT  235 (236)
T ss_pred             eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence            467999999999999999988887 9999998 699999999999999865

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=97.86  E-value=5.2e-05  Score=69.68  Aligned_cols=84  Identities=17%  Similarity=0.237  Sum_probs=64.1

Q ss_pred             CEEEcCCChHHHHHHHHHHc-C-------CCCCCcEEEecCCC-----------------CCCCCCH-------HH----
Q 023972            1 MALASNSHRATIESKISYQH-G-------WNESFSVIVGSDEV-----------------RTGKPSP-------DI----   44 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~-g-------l~~~Fd~v~~~~~~-----------------~~~KP~p-------e~----   44 (274)
                      ++|+||++..++...+ +.+ |       +.++||.|+++..-                 +..++..       ..    
T Consensus       203 lfLvTNS~~~yt~~im-~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~~~~~~~l~~g~vY~gG  281 (343)
T TIGR02244       203 LFLLTNSDYDYTDKGM-KYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLKWGEVDGLEPGKVYSGG  281 (343)
T ss_pred             EEEEeCCCHHHHHHHH-HHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCcccCCccccccCCCeEeCC
Confidence            5899999999999777 664 7       89999999987531                 1112221       11    


Q ss_pred             -HHHHHHHhCCCCCcEEEEecCHh-hHHHHH-HcCCEEEEecCC
Q 023972           45 -FLEAAKRLNMEPSSSLVIEDSVI-GVVAGK-AAGMEVVAVPSL   85 (274)
Q Consensus        45 -f~~~l~~l~v~p~~~vvvgD~~~-di~aA~-~aGi~vi~V~~~   85 (274)
                       .....+.+++.+.++++|||+.+ |+..|+ .+|+.+++|.+.
T Consensus       282 n~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE  325 (343)
T TIGR02244       282 SLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE  325 (343)
T ss_pred             CHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence             22356778899999999999998 999988 899999998774

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=97.71  E-value=1.4e-05  Score=65.98  Aligned_cols=79  Identities=6%  Similarity=0.026  Sum_probs=67.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCC-CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~-~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|.|++++.++...+ ++++... +|+.+++.+++...++.   +.+.+..++.+++++|+|+|+..++.++.++|+.+
T Consensus        60 i~I~Ts~~~~yA~~il-~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i  135 (162)
T TIGR02251        60 LVIFTASLEEYADPVL-DILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI  135 (162)
T ss_pred             EEEEcCCcHHHHHHHH-HHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence            5799999999999766 8888775 89999999887766665   77888889999999999999999999999998876


Q ss_pred             EEec
Q 023972           80 VAVP   83 (274)
Q Consensus        80 i~V~   83 (274)
                      ....
T Consensus       136 ~~f~  139 (162)
T TIGR02251       136 KSWF  139 (162)
T ss_pred             CCCC
Confidence            5554

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PTZ00445 p36-lilke protein; Provisional

Probab=97.65  E-value=0.00019  Score=61.18  Aligned_cols=73  Identities=14%  Similarity=0.216  Sum_probs=57.4

Q ss_pred             HHHHHHHHHcCCCCCCcEEEecC-----------CCCCCCCCHHH--H--HHHHHHhCCCCCcEEEEecCHhhHHHHHHc
Q 023972           11 TIESKISYQHGWNESFSVIVGSD-----------EVRTGKPSPDI--F--LEAAKRLNMEPSSSLVIEDSVIGVVAGKAA   75 (274)
Q Consensus        11 ~~~~~l~~~~gl~~~Fd~v~~~~-----------~~~~~KP~pe~--f--~~~l~~l~v~p~~~vvvgD~~~di~aA~~a   75 (274)
                      ++...| +.-+..-..+.|++..           ..+..||+|+.  |  .+++++.|+.|+++++++|....+++|++.
T Consensus       119 li~~~l-k~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~l  197 (219)
T PTZ00445        119 MVEAAL-KKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKE  197 (219)
T ss_pred             HHHHHH-HhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHC
Confidence            344444 5444444445565542           23788999999  9  889999999999999999999999999999


Q ss_pred             CCEEEEecC
Q 023972           76 GMEVVAVPS   84 (274)
Q Consensus        76 Gi~vi~V~~   84 (274)
                      |+.++.+..
T Consensus       198 Gi~ai~f~~  206 (219)
T PTZ00445        198 GYIALHVTG  206 (219)
T ss_pred             CCEEEEcCC
Confidence            999999975

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=97.60  E-value=0.0002  Score=60.42  Aligned_cols=82  Identities=16%  Similarity=0.161  Sum_probs=62.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcE-EEecCC----------CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSV-IVGSDE----------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV   69 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~-v~~~~~----------~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di   69 (274)
                      ++|+|++....+...+ +++|+..+|.. +...++          ...+++.+..+.+.+++.++++++++++||+..|+
T Consensus       106 v~ivS~s~~~~v~~~~-~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~  184 (202)
T TIGR01490       106 IVLVSASLTILVKPLA-RILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDL  184 (202)
T ss_pred             EEEEeCCcHHHHHHHH-HHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccH
Confidence            4799999999888655 88899887754 332111          12334556667778888899999999999999999


Q ss_pred             HHHHHcCCEEEEec
Q 023972           70 VAGKAAGMEVVAVP   83 (274)
Q Consensus        70 ~aA~~aGi~vi~V~   83 (274)
                      .+++.+|..++..+
T Consensus       185 ~~~~~a~~~~~v~~  198 (202)
T TIGR01490       185 PLLSLVGHPYVVNP  198 (202)
T ss_pred             HHHHhCCCcEEeCC
Confidence            99999998876554

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.60  E-value=0.00015  Score=66.36  Aligned_cols=69  Identities=14%  Similarity=0.133  Sum_probs=52.6

Q ss_pred             CCCCCCHHHHHHHHHHh--------CC-----CCCcEEEEecCH-hhHHHHHHcCCEEEEecCCCCcccc---cccccEE
Q 023972           36 RTGKPSPDIFLEAAKRL--------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR---YTAADEV   98 (274)
Q Consensus        36 ~~~KP~pe~f~~~l~~l--------~v-----~p~~~vvvgD~~-~di~aA~~aGi~vi~V~~~~~~~~~---iSss~~i   98 (274)
                      ..+||+|.+|..+++.+        ++     ++++++||||+. .|+..|+++|+.+++|.++......   ...++.+
T Consensus       230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v  309 (321)
T TIGR01456       230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI  309 (321)
T ss_pred             EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence            35899999999988777        43     347999999998 5999999999999999886322211   1235678


Q ss_pred             Eecccc
Q 023972           99 INSLLD  104 (274)
Q Consensus        99 i~~l~e  104 (274)
                      ++++.+
T Consensus       310 v~~l~e  315 (321)
T TIGR01456       310 VNDVFD  315 (321)
T ss_pred             ECCHHH
Confidence            887765

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.50  E-value=0.0002  Score=63.72  Aligned_cols=70  Identities=29%  Similarity=0.469  Sum_probs=56.3

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCCccccc----ccccEEEeccccc
Q 023972           36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL  105 (274)
Q Consensus        36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~~~~~i----Sss~~ii~~l~e~  105 (274)
                      -.+||+|.+|..+++.++..+++++||||+.. |+.+|.++|+.++.|.++-...+.+    --++++++++.+.
T Consensus       187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~  261 (269)
T COG0647         187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL  261 (269)
T ss_pred             ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence            56899999999999999999999999999987 9999999999999999875433221    2234566666553

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.50  E-value=0.00056  Score=58.49  Aligned_cols=79  Identities=13%  Similarity=0.044  Sum_probs=61.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcE--EE------ecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSV--IV------GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG   72 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~--v~------~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA   72 (274)
                      ++|+|++....+...+ +++|+..+|..  .+      ++... ..++.+...++.+++.+.   +++++||+.+|+.++
T Consensus        86 ~~IVS~~~~~~~~~il-~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml  160 (203)
T TIGR02137        86 VVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTML  160 (203)
T ss_pred             EEEEeCChHHHHHHHH-HHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHH
Confidence            4899999999888655 88999888862  22      22221 457778888887777664   899999999999999


Q ss_pred             HHcCCEEEEecC
Q 023972           73 KAAGMEVVAVPS   84 (274)
Q Consensus        73 ~~aGi~vi~V~~   84 (274)
                      +.+|+.+.....
T Consensus       161 ~~Ag~~ia~~ak  172 (203)
T TIGR02137       161 SEAHAGILFHAP  172 (203)
T ss_pred             HhCCCCEEecCC
Confidence            999999877755

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=97.46  E-value=0.0004  Score=62.03  Aligned_cols=74  Identities=19%  Similarity=0.222  Sum_probs=60.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEE------EecCCCCCCCCCH---------HHHHHHHHHhC--CCCCcEEEEe
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVI------VGSDEVRTGKPSP---------DIFLEAAKRLN--MEPSSSLVIE   63 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v------~~~~~~~~~KP~p---------e~f~~~l~~l~--v~p~~~vvvg   63 (274)
                      ++|+|++....+...| +++|+.+.+..|      +..+.+..++|.|         ..+..+.+.++  ..+.+||++|
T Consensus       140 v~IvS~G~~~~Ie~vL-~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vG  218 (277)
T TIGR01544       140 VFIFSAGIGNVLEEVL-RQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLG  218 (277)
T ss_pred             EEEEeCCcHHHHHHHH-HHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEEC
Confidence            4799999999999877 778998777777      5555666678888         66666777777  7889999999


Q ss_pred             cCHhhHHHHHHc
Q 023972           64 DSVIGVVAGKAA   75 (274)
Q Consensus        64 D~~~di~aA~~a   75 (274)
                      |+..|+.+|...
T Consensus       219 Ds~~Dl~ma~g~  230 (277)
T TIGR01544       219 DSQGDLRMADGV  230 (277)
T ss_pred             cChhhhhHhcCC
Confidence            999999997654

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>cd02169 Citrate_lyase_ligase Citrate lyase ligase

Probab=97.46  E-value=3.2e-05  Score=69.86  Aligned_cols=75  Identities=19%  Similarity=0.141  Sum_probs=59.0

Q ss_pred             CCCCCHHHHHHHH-HHhCCCCCcEEEEecCHhhH---------HHHHHcCCEEEEecCCCCcccccccccEEEecccccc
Q 023972           37 TGKPSPDIFLEAA-KRLNMEPSSSLVIEDSVIGV---------VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  106 (274)
Q Consensus        37 ~~KP~pe~f~~~l-~~l~v~p~~~vvvgD~~~di---------~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e~~  106 (274)
                      .++.+|+.|++.+ +++++  +.++++.|++||.         +.+++.|+.++.+++...++..+||+ .||+.+.+++
T Consensus       205 ~a~lsa~~Fi~iL~~~l~~--~~ivvG~Df~FG~~r~G~~~l~~~~~~~gf~v~~v~~~~~~g~~ISST-~IR~~l~~G~  281 (297)
T cd02169         205 QTALDARIFRKYIAPALNI--TKRYVGEEPFSRVTAIYNQTMQEELLSPAIEVIEIERKKYDGQPISAS-TVRQLLKEGN  281 (297)
T ss_pred             HhcCCHHHHHHHHHHHcCC--cEEEEcCCCCCCCcchhHHHHHHhcccCCCEEEEecccccCCcEEcHH-HHHHHHHcCC
Confidence            5688999999733 44555  7888889999983         33677799999999988888888886 7777888898


Q ss_pred             ccccCCCCCCCcccCCCC
Q 023972          107 PEKWGLPPFQDWIEGTLP  124 (274)
Q Consensus       107 ~~~~~l~~~~~~~a~~lL  124 (274)
                      +..          |++||
T Consensus       282 v~~----------A~~lL  289 (297)
T cd02169         282 LEE----------IAKLV  289 (297)
T ss_pred             HHH----------HHHhC
Confidence            876          77766

Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=97.44  E-value=0.00016  Score=61.20  Aligned_cols=53  Identities=30%  Similarity=0.431  Sum_probs=48.3

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCC
Q 023972           35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPK   87 (274)
Q Consensus        35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~   87 (274)
                      .-.+||+|..|..+++.+|++|+++|||||... |+-.|...||+-+.|.++..
T Consensus       177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~  230 (262)
T KOG3040|consen  177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKF  230 (262)
T ss_pred             EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecccc
Confidence            346899999999999999999999999988887 89999999999999998743

>PRK08238 hypothetical protein; Validated

Probab=97.27  E-value=0.0016  Score=62.66  Aligned_cols=77  Identities=16%  Similarity=0.101  Sum_probs=60.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+|++++..++..+ +++|+   ||.++++++....||++..- .+.+.++.  +.++++||+..|+.+++.+| +.+
T Consensus        91 v~LaTas~~~~a~~i~-~~lGl---Fd~Vigsd~~~~~kg~~K~~-~l~~~l~~--~~~~yvGDS~~Dlp~~~~A~-~av  162 (479)
T PRK08238         91 LVLATASDERLAQAVA-AHLGL---FDGVFASDGTTNLKGAAKAA-ALVEAFGE--RGFDYAGNSAADLPVWAAAR-RAI  162 (479)
T ss_pred             EEEEeCCCHHHHHHHH-HHcCC---CCEEEeCCCccccCCchHHH-HHHHHhCc--cCeeEecCCHHHHHHHHhCC-CeE
Confidence            4799999999988655 88887   99999999887787776532 34455543  56899999999999999999 666


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      .|++.
T Consensus       163 ~Vn~~  167 (479)
T PRK08238        163 VVGAS  167 (479)
T ss_pred             EECCC
Confidence            77653

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=97.24  E-value=0.001  Score=54.70  Aligned_cols=74  Identities=16%  Similarity=0.161  Sum_probs=53.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCC------------CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDE------------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG   68 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~------------~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d   68 (274)
                      ++|+|++.+..+...+ +++|+..+|...+..++            .......+..+.+.++++++++++++++||+..|
T Consensus        92 ~~ivS~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D  170 (177)
T TIGR01488        92 TVIVSGGFDFFVEPVA-EKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVND  170 (177)
T ss_pred             EEEECCCcHHHHHHHH-HHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHH
Confidence            4799999999888766 88899877764443321            1112223456666777888889999999999999


Q ss_pred             HHHHHHc
Q 023972           69 VVAGKAA   75 (274)
Q Consensus        69 i~aA~~a   75 (274)
                      +.+++.+
T Consensus       171 ~~~~~~a  177 (177)
T TIGR01488       171 LPMLKLA  177 (177)
T ss_pred             HHHHhcC
Confidence            9988653

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=97.10  E-value=0.00087  Score=59.84  Aligned_cols=54  Identities=26%  Similarity=0.414  Sum_probs=48.9

Q ss_pred             CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCC
Q 023972           34 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPK   87 (274)
Q Consensus        34 ~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~   87 (274)
                      ..-.+||++.++..++++.+++|++++||||... |+..|++.|+++.++-++-.
T Consensus       219 P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~  273 (306)
T KOG2882|consen  219 PIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVT  273 (306)
T ss_pred             CeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcC
Confidence            3456899999999999999999999999999998 99999999999999987643

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=96.94  E-value=0.0044  Score=51.34  Aligned_cols=74  Identities=28%  Similarity=0.349  Sum_probs=50.6

Q ss_pred             CEEEcCCC-------hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC-----CCCCcEEEEecCHh-
Q 023972            1 MALASNSH-------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-----MEPSSSLVIEDSVI-   67 (274)
Q Consensus         1 laIvSn~~-------~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~-----v~p~~~vvvgD~~~-   67 (274)
                      +.|+||+.       ...+. .+.+.+|+.    .+..    ...||  ..+.++++.++     .+|++++||||-.+ 
T Consensus        80 v~IvSNsaGs~~d~~~~~a~-~~~~~lgIp----vl~h----~~kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~T  148 (168)
T PF09419_consen   80 VLIVSNSAGSSDDPDGERAE-ALEKALGIP----VLRH----RAKKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFT  148 (168)
T ss_pred             EEEEECCCCcccCccHHHHH-HHHHhhCCc----EEEe----CCCCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHH
Confidence            46899983       44444 455666752    2221    24677  44444444443     35999999999998 


Q ss_pred             hHHHHHHcCCEEEEecCC
Q 023972           68 GVVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        68 di~aA~~aGi~vi~V~~~   85 (274)
                      |+-+|+..|+.++++..+
T Consensus       149 DVl~gN~~G~~tilv~~g  166 (168)
T PF09419_consen  149 DVLMGNRMGSYTILVTDG  166 (168)
T ss_pred             HHHHhhccCceEEEEecC
Confidence            999999999999998754

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=96.89  E-value=0.001  Score=58.12  Aligned_cols=71  Identities=18%  Similarity=0.237  Sum_probs=54.6

Q ss_pred             CEEEcCCChHHHH--HHHHHHcCCCC-CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIE--SKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~--~~l~~~~gl~~-~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++++||+++....  ..| +++|+.. +|+.|+++++...     +.+..+++++++.+.+++++||...|++.....+.
T Consensus        43 ~~ivTN~~~~~~~~~~~L-~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        43 VYFVSNSPRNIFSLHKTL-KSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             EEEEeCCCCChHHHHHHH-HHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence            4799999887655  455 8899997 9999999886432     45555667788888999999999888876655443

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain

Probab=96.79  E-value=0.00052  Score=57.69  Aligned_cols=71  Identities=18%  Similarity=0.131  Sum_probs=51.1

Q ss_pred             CCCCCCHHHHHHHH-HHhCCCCCcEEEEecCHhhH---------HHHHHcCCEEEEecCCCCcccccccccEEEeccccc
Q 023972           36 RTGKPSPDIFLEAA-KRLNMEPSSSLVIEDSVIGV---------VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        36 ~~~KP~pe~f~~~l-~~l~v~p~~~vvvgD~~~di---------~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ..++.+|+.|++.+ +++++  +.++++.|++||.         +.-.+.|+++..++....++..+||+ .||+.+.++
T Consensus        89 ~~a~lsa~~Fi~~L~~~l~~--~~ivvG~df~FG~~~~G~~~~L~~~~~~g~~v~~I~r~~~~g~~iSST-~IR~~L~~G  165 (182)
T smart00764       89 SQTTLDLRIFRKYIAPALGI--THRYVGEEPFSPVTAIYNQTMKQTLLSPAIEVVEIERKKANGQPISAS-TVRKLLKEG  165 (182)
T ss_pred             HHhcCCHHHHHHHHHHHcCc--eEEEEcCCCCCCCCCccCHHHHHHHhhCCCEEEEEecccCCCcEECHH-HHHHHHHcC
Confidence            35688999999743 44655  7888889999982         22246699999998876666666775 777777777


Q ss_pred             cccc
Q 023972          106 RPEK  109 (274)
Q Consensus       106 ~~~~  109 (274)
                      ++..
T Consensus       166 ~v~~  169 (182)
T smart00764      166 NLEE  169 (182)
T ss_pred             CHHH
Confidence            7654

Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=96.74  E-value=0.004  Score=61.19  Aligned_cols=66  Identities=20%  Similarity=0.234  Sum_probs=49.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.++..+...+ +++|+.++|..+           .|+.=.+.+++++..+.+++|+||..+|+.+++++|+.
T Consensus       404 v~ivTgd~~~~a~~i~-~~lgi~~~f~~~-----------~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vg  469 (556)
T TIGR01525       404 LVMLTGDNRSAAEAVA-AELGIDEVHAEL-----------LPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVG  469 (556)
T ss_pred             EEEEeCCCHHHHHHHH-HHhCCCeeeccC-----------CHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEe
Confidence            4799999999888655 889998777643           11222234445544667999999999999999999943

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=96.40  E-value=0.024  Score=47.08  Aligned_cols=80  Identities=15%  Similarity=0.158  Sum_probs=55.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCC----------CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWN----------ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~----------~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      +|++|-++.......+++.+++.          ++|+..-....     ..-..|..+.++.|++.++++++.|-...++
T Consensus        64 lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g-----sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~  138 (169)
T PF12689_consen   64 LAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPG-----SKTTHFRRIHRKTGIPYEEMLFFDDESRNIE  138 (169)
T ss_dssp             EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS------HHHHHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred             EEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecC-----chHHHHHHHHHhcCCChhHEEEecCchhcce
Confidence            58899655444444555999999          88988555442     3457888889999999999999999999999


Q ss_pred             HHHHcCCEEEEecCC
Q 023972           71 AGKAAGMEVVAVPSL   85 (274)
Q Consensus        71 aA~~aGi~vi~V~~~   85 (274)
                      ...+.|+.++.++.+
T Consensus       139 ~v~~lGV~~v~v~~G  153 (169)
T PF12689_consen  139 VVSKLGVTCVLVPDG  153 (169)
T ss_dssp             HHHTTT-EEEE-SSS
T ss_pred             eeEecCcEEEEeCCC
Confidence            998999999999885

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=96.39  E-value=0.0074  Score=59.07  Aligned_cols=65  Identities=22%  Similarity=0.255  Sum_probs=49.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||.++..+...+ +++|+.++|..+.         |  +.=...+++++.+.++++|+||..+|+.+++++|+
T Consensus       382 v~vvTgd~~~~a~~i~-~~lgi~~~f~~~~---------p--~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~v  446 (536)
T TIGR01512       382 VVMLTGDRRAVAERVA-RELGIDEVHAELL---------P--EDKLEIVKELREKYGPVAMVGDGINDAPALAAADV  446 (536)
T ss_pred             EEEEcCCCHHHHHHHH-HHcCChhhhhccC---------c--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCE
Confidence            4799999999888766 8899988775332         2  12234555555566899999999999999999996

.

>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2

Probab=96.21  E-value=0.0015  Score=53.63  Aligned_cols=72  Identities=26%  Similarity=0.337  Sum_probs=46.4

Q ss_pred             HHcCCCCCCcEEEecC-CCCCCCCCHHHHHHH-HH-HhCCCCCcEEEEecCHhhH----------HHHHHcCCEEEEecC
Q 023972           18 YQHGWNESFSVIVGSD-EVRTGKPSPDIFLEA-AK-RLNMEPSSSLVIEDSVIGV----------VAGKAAGMEVVAVPS   84 (274)
Q Consensus        18 ~~~gl~~~Fd~v~~~~-~~~~~KP~pe~f~~~-l~-~l~v~p~~~vvvgD~~~di----------~aA~~aGi~vi~V~~   84 (274)
                      +.+|+    |.++.-+ +...++.+|+.|++. +. ++++  ..++++.|++||.          +.+++.|+.+..++.
T Consensus        72 ~~~Gv----d~~~~~~F~~~~~~ls~~~Fi~~iL~~~l~~--~~ivvG~DfrFG~~~~G~~~~L~~~~~~~g~~v~~v~~  145 (157)
T PF06574_consen   72 ESLGV----DYVIVIPFTEEFANLSPEDFIEKILKEKLNV--KHIVVGEDFRFGKNRSGDVELLKELGKEYGFEVEVVPP  145 (157)
T ss_dssp             HHTTE----SEEEEE-CCCHHCCS-HHHHHHHHCCCHCTE--EEEEEETT-EESGGGEEEHHHHHHCTTTT-SEEEEE--
T ss_pred             HHcCC----CEEEEecchHHHHcCCHHHHHHHHHHhcCCc--cEEEEccCccCCCCCCCCHHHHHHhcccCceEEEEECC
Confidence            66665    5544432 334678999999985 44 5665  6788889999983          346778899999999


Q ss_pred             CCCcccccccc
Q 023972           85 LPKQTHRYTAA   95 (274)
Q Consensus        85 ~~~~~~~iSss   95 (274)
                      ...++..+||+
T Consensus       146 ~~~~~~~ISSt  156 (157)
T PF06574_consen  146 VKIDGEKISST  156 (157)
T ss_dssp             -EETTEE-SHH
T ss_pred             EEcCCcEeCCC
Confidence            87788888885

7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=95.75  E-value=0.046  Score=46.71  Aligned_cols=69  Identities=17%  Similarity=0.130  Sum_probs=47.5

Q ss_pred             CChHHHHHHHHHHcCCC----CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972            7 SHRATIESKISYQHGWN----ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus         7 ~~~~~~~~~l~~~~gl~----~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      .....+...+ +..++.    .+|..+.....   .|+.  ....+++.+|+++++++++||+.+|+.+.+.+|..+.+
T Consensus       148 ~~~~~~~~~l-~~~~~~~~~~~~~~ei~~~~~---~Kg~--al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~  220 (221)
T TIGR02463       148 SRMPRFTALL-ADLGLAIVQGNRFSHVLGASS---SKGK--AANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI  220 (221)
T ss_pred             hHHHHHHHHH-HHcCCeEEecCCeeEEecCCC---CHHH--HHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence            3344444444 445664    44444444332   3544  45678899999999999999999999999999987653

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=95.69  E-value=0.023  Score=50.08  Aligned_cols=39  Identities=13%  Similarity=0.103  Sum_probs=35.0

Q ss_pred             CHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972           41 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus        41 ~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      .+..+..+++++++++++++++||+.+|+.+++.+|+.+
T Consensus       200 K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~v  238 (272)
T PRK10530        200 KGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGV  238 (272)
T ss_pred             hHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceE
Confidence            456788899999999999999999999999999999754

>TIGR01684 viral_ppase viral phosphatase

Probab=95.57  E-value=0.018  Score=51.78  Aligned_cols=44  Identities=11%  Similarity=0.144  Sum_probs=39.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF   45 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f   45 (274)
                      ++|+||+.+..+...| +++|+..+|+.++++++....||+|+..
T Consensus       165 LaIaTS~~Re~v~~~L-~~lGLd~YFdvIIs~Gdv~~~kp~~e~~  208 (301)
T TIGR01684       165 LVLWSYGDRDHVVESM-RKVKLDRYFDIIISGGHKAEEYSTMSTE  208 (301)
T ss_pred             EEEEECCCHHHHHHHH-HHcCCCcccCEEEECCccccCCCCcccc
Confidence            5899999999998766 8899999999999999999999998665

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=95.17  E-value=0.051  Score=46.34  Aligned_cols=79  Identities=15%  Similarity=0.118  Sum_probs=50.6

Q ss_pred             EEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972            3 LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV   82 (274)
Q Consensus         3 IvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V   82 (274)
                      ++++.....+...+ +..++..++.. ...+-....-........+++.+++++++++++||+.+|+.+.+.+|+.+..-
T Consensus       112 ~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~  189 (215)
T TIGR01487       112 MREGKDVDEVREII-KERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVA  189 (215)
T ss_pred             ecCCccHHHHHHHH-HhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcC
Confidence            34555556666555 55555432110 00011112223345777788899999999999999999999999999886554


Q ss_pred             c
Q 023972           83 P   83 (274)
Q Consensus        83 ~   83 (274)
                      +
T Consensus       190 n  190 (215)
T TIGR01487       190 N  190 (215)
T ss_pred             C
Confidence            4

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=95.09  E-value=0.05  Score=46.41  Aligned_cols=48  Identities=19%  Similarity=0.214  Sum_probs=39.7

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972           36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP   83 (274)
Q Consensus        36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~   83 (274)
                      ......+..+..+++++++++++++++||+.+|+.+.+.+|+.+..-+
T Consensus       145 ~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N  192 (225)
T TIGR01482       145 PQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVAN  192 (225)
T ss_pred             eCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCC
Confidence            344556677778889999999999999999999999999998765443

catalyze the same reaction as SPP.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=95.04  E-value=0.054  Score=44.43  Aligned_cols=61  Identities=18%  Similarity=0.206  Sum_probs=41.8

Q ss_pred             HHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCC----CCCcEEEEecC-----------HhhHHHHHHcCCEEE
Q 023972           18 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM----EPSSSLVIEDS-----------VIGVVAGKAAGMEVV   80 (274)
Q Consensus        18 ~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v----~p~~~vvvgD~-----------~~di~aA~~aGi~vi   80 (274)
                      +.+++.  +...++...-..+||.+.++..+++.++.    +.++++||||.           -.|.+.|.+.|++..
T Consensus        78 ~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen   78 KELGIP--IQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             HHCTS---EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             HHcCCc--eEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence            455553  33333334447999999999999888764    78999999996           468999999999863

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=94.91  E-value=0.078  Score=45.42  Aligned_cols=46  Identities=20%  Similarity=0.205  Sum_probs=38.9

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV   82 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V   82 (274)
                      .....+..+..+++.+++++++++++||+.+|+.+.+.+|+.+..-
T Consensus       154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~  199 (230)
T PRK01158        154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVA  199 (230)
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEec
Confidence            3444567888889999999999999999999999999999886543

>PRK10671 copA copper exporting ATPase; Provisional

Probab=94.62  E-value=0.077  Score=54.76  Aligned_cols=67  Identities=19%  Similarity=0.230  Sum_probs=51.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++++|+..+..+.... +++|+.++|..+           .|+.=.+++++++.++.+++|+||..+|+.+++.+|+.+
T Consensus       669 v~~~Tgd~~~~a~~ia-~~lgi~~~~~~~-----------~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgi  735 (834)
T PRK10671        669 LVMLTGDNPTTANAIA-KEAGIDEVIAGV-----------LPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGI  735 (834)
T ss_pred             EEEEcCCCHHHHHHHH-HHcCCCEEEeCC-----------CHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeE
Confidence            4689999998887655 888997544321           244445677777777889999999999999999999844

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=94.43  E-value=0.12  Score=51.01  Aligned_cols=65  Identities=17%  Similarity=0.123  Sum_probs=46.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+|+..+..+.... +++|+. +|     ++-    +|  +.-.+.++++..++++++|+||..+|..+++++|+.
T Consensus       424 v~ilSgd~~~~a~~ia-~~lgi~-~~-----~~~----~p--~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vg  488 (562)
T TIGR01511       424 PVMLTGDNRKTAKAVA-KELGIN-VR-----AEV----LP--DDKAALIKELQEKGRVVAMVGDGINDAPALAQADVG  488 (562)
T ss_pred             EEEEcCCCHHHHHHHH-HHcCCc-EE-----ccC----Ch--HHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEE
Confidence            4789999999888655 888994 22     111    22  222344455555678999999999999999999974

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=94.39  E-value=0.16  Score=43.66  Aligned_cols=83  Identities=18%  Similarity=0.240  Sum_probs=61.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCC----------CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~----------~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+|.+....+.. +.+.+|+...+......++          ...++-..+...+.++++|+++++++.+||+.+|+-
T Consensus        96 v~iiSgg~~~lv~~-ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlp  174 (212)
T COG0560          96 VVIISGGFTFLVEP-IAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLP  174 (212)
T ss_pred             EEEEcCChHHHHHH-HHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHH
Confidence            47899999987774 6689999887765544443          111222345555688889999999999999999999


Q ss_pred             HHHHcCCEEEEecC
Q 023972           71 AGKAAGMEVVAVPS   84 (274)
Q Consensus        71 aA~~aGi~vi~V~~   84 (274)
                      +-+.+|..+..-+.
T Consensus       175 ml~~ag~~ia~n~~  188 (212)
T COG0560         175 MLEAAGLPIAVNPK  188 (212)
T ss_pred             HHHhCCCCeEeCcC
Confidence            99999988765544

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=94.24  E-value=0.28  Score=41.08  Aligned_cols=81  Identities=14%  Similarity=0.107  Sum_probs=56.8

Q ss_pred             EEEcCCChHHHHHHHHHH---cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            2 ALASNSHRATIESKISYQ---HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~---~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      .|-|+.+-....-.+ .+   .+|..+|+-.+-..  .-.|-....|.+.+...|++|.++++..|...-+.+|+.+|+.
T Consensus       123 yiYSSGSV~AQkL~F-ghs~agdL~~lfsGyfDtt--iG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~  199 (229)
T COG4229         123 YIYSSGSVKAQKLFF-GHSDAGDLNSLFSGYFDTT--IGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLA  199 (229)
T ss_pred             EEEcCCCchhHHHhh-cccccccHHhhhcceeecc--ccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchh
Confidence            345555555443222 22   23444554433332  2356677899999999999999999999999999999999999


Q ss_pred             EEEecCC
Q 023972           79 VVAVPSL   85 (274)
Q Consensus        79 vi~V~~~   85 (274)
                      ++.+...
T Consensus       200 t~l~~R~  206 (229)
T COG4229         200 TGLAVRP  206 (229)
T ss_pred             eeeeecC
Confidence            9888653

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=94.13  E-value=0.12  Score=45.78  Aligned_cols=43  Identities=14%  Similarity=0.034  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972           42 PDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        42 pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~aGi~vi~V~~   84 (274)
                      .....++++.+++++ ++++++||+.+|+.+++.+|+.++.-+.
T Consensus       192 g~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA  235 (273)
T PRK00192        192 GKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP  235 (273)
T ss_pred             HHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence            345666888999999 9999999999999999999988766554

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=93.84  E-value=0.32  Score=42.52  Aligned_cols=50  Identities=24%  Similarity=0.240  Sum_probs=41.7

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972           35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~   84 (274)
                      .....+.+.....+++.+++++++++++||+.+|+.+.+.++...+++..
T Consensus       162 ~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n  211 (249)
T TIGR01485       162 LPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN  211 (249)
T ss_pred             EeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence            44666777888888899999999999999999999999987666666654

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=93.75  E-value=0.078  Score=43.22  Aligned_cols=74  Identities=16%  Similarity=0.318  Sum_probs=59.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      +||+|......++... +.+|+...|.-   ..+      .-..|.++++++++.++++.++||...|+-.-++.|+.+.
T Consensus        54 vAIITGr~s~ive~Ra-~~LGI~~~~qG---~~d------K~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a  123 (170)
T COG1778          54 VAIITGRDSPIVEKRA-KDLGIKHLYQG---ISD------KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA  123 (170)
T ss_pred             EEEEeCCCCHHHHHHH-HHcCCceeeec---hHh------HHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence            4899999999898877 78898654432   122      2368888999999999999999999999999999999876


Q ss_pred             EecC
Q 023972           81 AVPS   84 (274)
Q Consensus        81 ~V~~   84 (274)
                      .-+.
T Consensus       124 ~~dA  127 (170)
T COG1778         124 VADA  127 (170)
T ss_pred             cccc
Confidence            6544

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=93.71  E-value=0.11  Score=42.36  Aligned_cols=64  Identities=16%  Similarity=0.085  Sum_probs=46.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCC-CCC-cEEEecCCCCCCCCCHHHHHHHH-HHhCCCCCcEEEEecCHhhHHH
Q 023972            1 MALASNSHRATIESKISYQHGWN-ESF-SVIVGSDEVRTGKPSPDIFLEAA-KRLNMEPSSSLVIEDSVIGVVA   71 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~-~~F-d~v~~~~~~~~~KP~pe~f~~~l-~~l~v~p~~~vvvgD~~~di~a   71 (274)
                      ++|+|++.+.++...+ +.++.. .+| +.+++.+++.  .    .+.+-+ ..++.+.+.+|+++|+..-...
T Consensus        76 l~I~T~~~~~yA~~vl-~~ldp~~~~F~~ri~~rd~~~--~----~~~KdL~~i~~~d~~~vvivDd~~~~~~~  142 (156)
T TIGR02250        76 MHVYTMGTRAYAQAIA-KLIDPDGKYFGDRIISRDESG--S----PHTKSLLRLFPADESMVVIIDDREDVWPW  142 (156)
T ss_pred             EEEEeCCcHHHHHHHH-HHhCcCCCeeccEEEEeccCC--C----CccccHHHHcCCCcccEEEEeCCHHHhhc
Confidence            5899999999999766 888888 589 7788877643  1    223334 3346677899999999864443

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=93.03  E-value=0.28  Score=51.08  Aligned_cols=77  Identities=18%  Similarity=0.165  Sum_probs=58.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC----------------CCCCCHHHHHHHHHHhCCCCCcEEEEec
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIFLEAAKRLNMEPSSSLVIED   64 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~----------------~~KP~pe~f~~~l~~l~v~p~~~vvvgD   64 (274)
                      +.++|+.....+.... +.+|+...++.++++.+..                .+.++|+.-...++.++-....+.|+||
T Consensus       547 v~miTGD~~~tA~~ia-~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGD  625 (884)
T TIGR01522       547 IIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGD  625 (884)
T ss_pred             EEEECCCCHHHHHHHH-HHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECC
Confidence            3689999999888644 8899988887776665442                2346777777766666555578999999


Q ss_pred             CHhhHHHHHHcCCE
Q 023972           65 SVIGVVAGKAAGME   78 (274)
Q Consensus        65 ~~~di~aA~~aGi~   78 (274)
                      ..+|..+.+++++-
T Consensus       626 GvND~pAl~~AdVG  639 (884)
T TIGR01522       626 GVNDAPALKLADIG  639 (884)
T ss_pred             CcccHHHHHhCCee
Confidence            99999999999954

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=92.84  E-value=0.17  Score=43.76  Aligned_cols=55  Identities=18%  Similarity=0.065  Sum_probs=43.5

Q ss_pred             cEEEec----CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972           27 SVIVGS----DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus        27 d~v~~~----~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      ..+.++    +-.....+.+.....+++++++++++++++||+.+|+.+.+.+|..+..
T Consensus       142 ~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav  200 (236)
T TIGR02471       142 KVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV  200 (236)
T ss_pred             EEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence            444554    3345566777888889999999999999999999999999998876643

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=92.55  E-value=0.37  Score=46.14  Aligned_cols=85  Identities=20%  Similarity=0.252  Sum_probs=51.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcC--------CCCCCcEEEecCC-----------------CCCCCCC-------------H
Q 023972            1 MALASNSHRATIESKISYQHG--------WNESFSVIVGSDE-----------------VRTGKPS-------------P   42 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~g--------l~~~Fd~v~~~~~-----------------~~~~KP~-------------p   42 (274)
                      +.++||++-.++...+.-.+|        +.++||.|++...                 .+..+..             .
T Consensus       202 lFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l~~~~~~~~l~~g~vY~g  281 (448)
T PF05761_consen  202 LFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKLKWGKYVGPLEKGKVYSG  281 (448)
T ss_dssp             EEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSEECS---SS--TC-EEEE
T ss_pred             EEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCccccccccccccCCCEeec
Confidence            358999999999987754443        5689999998632                 1111111             1


Q ss_pred             HHHHHHHHHhCCCCCcEEEEecCHh-hHHHHH-HcCCEEEEecCC
Q 023972           43 DIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGK-AAGMEVVAVPSL   85 (274)
Q Consensus        43 e~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~-~aGi~vi~V~~~   85 (274)
                      .....+.+.++....+++++||+.+ |+..++ ..|+++++|-+.
T Consensus       282 Gn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E  326 (448)
T PF05761_consen  282 GNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE  326 (448)
T ss_dssp             --HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred             CCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence            1122344556777789999999999 776655 559999888653

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=92.21  E-value=0.24  Score=41.63  Aligned_cols=45  Identities=22%  Similarity=0.145  Sum_probs=39.0

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      +...+.+..+..+++++++++.+++++||+.+|+.+++.+|+.+.
T Consensus       159 p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       159 PAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            456667788888899999999999999999999999999998764

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR00685 T6PP trehalose-phosphatase

Probab=90.59  E-value=0.41  Score=41.78  Aligned_cols=59  Identities=15%  Similarity=0.030  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc-------CCEEEEecCCCCcccccccccEEEecccc
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-------GMEVVAVPSLPKQTHRYTAADEVINSLLD  104 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a-------Gi~vi~V~~~~~~~~~iSss~~ii~~l~e  104 (274)
                      ...+..++++++.++..++++||..+|..+.+.+       |...+.+..+    ...+.++.++.+..+
T Consensus       169 g~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~  234 (244)
T TIGR00685       169 GEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQ  234 (244)
T ss_pred             HHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHH
Confidence            3777788999999889999999999999988877       6666666432    122334466665544

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=90.33  E-value=1.3  Score=35.13  Aligned_cols=93  Identities=11%  Similarity=0.207  Sum_probs=59.3

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972            2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      .|+|......+.. +.+-.|+.  -+.++...       +++.=.++++.++-+-..++||||-.+|+-+-+++.+-++.
T Consensus        49 ~IASgDr~gsl~~-lae~~gi~--~~rv~a~a-------~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~t  118 (152)
T COG4087          49 YIASGDRKGSLVQ-LAEFVGIP--VERVFAGA-------DPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICT  118 (152)
T ss_pred             EEecCCcchHHHH-HHHHcCCc--eeeeeccc-------CHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEE
Confidence            3555555555543 33555542  23333322       34555556777765558999999999999999999888777


Q ss_pred             ecCCCCcccccccccEEEecccc
Q 023972           82 VPSLPKQTHRYTAADEVINSLLD  104 (274)
Q Consensus        82 V~~~~~~~~~iSss~~ii~~l~e  104 (274)
                      +..........-++|.+++++.+
T Consensus       119 iq~e~v~~r~l~~ADvvik~i~e  141 (152)
T COG4087         119 IQQEGVPERLLLTADVVLKEIAE  141 (152)
T ss_pred             eccCCcchHHHhhchhhhhhHHH
Confidence            76543333335566677777765

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=89.99  E-value=0.77  Score=41.48  Aligned_cols=35  Identities=14%  Similarity=0.230  Sum_probs=30.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVR   36 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~   36 (274)
                      ++|+||+++..+...| +.+|+..+|+.++++++..
T Consensus       167 LaIvTNg~Re~v~~~L-e~lgL~~yFDvII~~g~i~  201 (303)
T PHA03398        167 LVLWSYGNREHVVHSL-KETKLEGYFDIIICGGRKA  201 (303)
T ss_pred             EEEEcCCChHHHHHHH-HHcCCCccccEEEECCCcc
Confidence            5899999999998766 8899999999999988743

>PLN02645 phosphoglycolate phosphatase

Probab=88.06  E-value=2.4  Score=38.50  Aligned_cols=71  Identities=17%  Similarity=0.125  Sum_probs=48.7

Q ss_pred             CEEEcCCC---hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~---~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      +.++||.+   +......| +.+|+...++.|+++..         .....++..+....+.+++.+.....+.++++|+
T Consensus        63 ~~~~TN~~~~~~~~~~~~l-~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi  132 (311)
T PLN02645         63 LVFVTNNSTKSRAQYGKKF-ESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDKKVYVIGEEGILEELELAGF  132 (311)
T ss_pred             EEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEeehHH---------HHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCC
Confidence            36899987   44444455 67899888888888754         3333444455443456777777788899999999


Q ss_pred             EEEE
Q 023972           78 EVVA   81 (274)
Q Consensus        78 ~vi~   81 (274)
                      .++.
T Consensus       133 ~~~~  136 (311)
T PLN02645        133 QYLG  136 (311)
T ss_pred             EEec
Confidence            8765

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=87.53  E-value=2.2  Score=38.01  Aligned_cols=63  Identities=10%  Similarity=0.170  Sum_probs=41.2

Q ss_pred             CEEEcCCChH---HHHHHHHHHcCCCCC-CcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHH
Q 023972            1 MALASNSHRA---TIESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA   71 (274)
Q Consensus         1 laIvSn~~~~---~~~~~l~~~~gl~~~-Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~a   71 (274)
                      ++++||.+..   .+...| +.+|+..+ ++.++..++ .  ++.+.-+..+.+.+++    +++|||...|+..
T Consensus       137 v~iVTnR~~~~~~~T~~~L-kk~Gi~~~~~d~lllr~~-~--~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~  203 (266)
T TIGR01533       137 IFYVSNRSEKEKAATLKNL-KRFGFPQADEEHLLLKKD-K--SSKESRRQKVQKDYEI----VLLFGDNLLDFDD  203 (266)
T ss_pred             EEEEeCCCcchHHHHHHHH-HHcCcCCCCcceEEeCCC-C--CCcHHHHHHHHhcCCE----EEEECCCHHHhhh
Confidence            4789998743   334555 77899764 467777654 2  3445666555565544    7888999988743

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=87.38  E-value=3.8  Score=36.05  Aligned_cols=78  Identities=17%  Similarity=0.084  Sum_probs=58.4

Q ss_pred             EEcCCChHHHHHHHHHHcCCCCCCc--EEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            3 LASNSHRATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         3 IvSn~~~~~~~~~l~~~~gl~~~Fd--~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      +||+.+--....+. =.++|..+|.  .|+++-.++  |  ..+|.++.+++|-+....++|||-..--++|+..+++++
T Consensus       180 LVTs~qLVPaLaKc-LLy~L~~~f~ieNIYSa~kvG--K--~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw  254 (274)
T TIGR01658       180 LVTSGQLIPSLAKC-LLFRLDTIFRIENVYSSIKVG--K--LQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV  254 (274)
T ss_pred             EEEcCccHHHHHHH-HHhccCCccccccccchhhcc--h--HHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence            56666544433333 2458888874  577776643  4  479999999999866888999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      -|...
T Consensus       255 ~I~~h  259 (274)
T TIGR01658       255 KIDLH  259 (274)
T ss_pred             EeecC
Confidence            88663

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=86.52  E-value=1.3  Score=38.71  Aligned_cols=43  Identities=16%  Similarity=0.156  Sum_probs=36.4

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972           40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV   82 (274)
Q Consensus        40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V   82 (274)
                      -.......+++.+++++++++++||+.+|+.+.+.+|+.+..-
T Consensus       188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~  230 (256)
T TIGR00099       188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG  230 (256)
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec
Confidence            3456666788899999999999999999999999999876553

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=86.29  E-value=0.91  Score=39.22  Aligned_cols=45  Identities=13%  Similarity=-0.018  Sum_probs=34.9

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      +.+|+.+..++.....+++++.+++++||+.+|+.+.+.+|+.++
T Consensus       179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~  223 (225)
T TIGR02461       179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL  223 (225)
T ss_pred             CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence            567776666655444445577799999999999999999998765

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=84.98  E-value=1.5  Score=38.39  Aligned_cols=44  Identities=18%  Similarity=0.163  Sum_probs=36.9

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972           40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP   83 (274)
Q Consensus        40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~   83 (274)
                      ........+++.+|+++++++++||+.+|+.+-+.+|..+..-+
T Consensus       196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N  239 (270)
T PRK10513        196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGN  239 (270)
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecC
Confidence            34466777889999999999999999999999999998765543

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=84.97  E-value=3.7  Score=42.01  Aligned_cols=65  Identities=15%  Similarity=0.134  Sum_probs=44.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      +.++|+..+..+.... +++|+..+++      .      .|+.=...+++++ .+..++|+||..+|..+.+.+++.+
T Consensus       587 ~~llTGd~~~~a~~ia-~~lgi~~~~~------~------~p~~K~~~v~~l~-~~~~v~mvGDgiNDapAl~~A~vgi  651 (741)
T PRK11033        587 GVMLTGDNPRAAAAIA-GELGIDFRAG------L------LPEDKVKAVTELN-QHAPLAMVGDGINDAPAMKAASIGI  651 (741)
T ss_pred             EEEEcCCCHHHHHHHH-HHcCCCeecC------C------CHHHHHHHHHHHh-cCCCEEEEECCHHhHHHHHhCCeeE
Confidence            3689999999887644 8899963322      1      2232223444454 3368999999999999999998544

>PRK10976 putative hydrolase; Provisional

Probab=84.45  E-value=1.2  Score=39.09  Aligned_cols=42  Identities=14%  Similarity=0.105  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP   83 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~   83 (274)
                      ......+++.+|+++++++++||+.+|+.+-+.+|..+..-+
T Consensus       192 g~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~N  233 (266)
T PRK10976        192 GHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGN  233 (266)
T ss_pred             HHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecC
Confidence            566777889999999999999999999999999998765543

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=84.31  E-value=2.3  Score=36.03  Aligned_cols=41  Identities=17%  Similarity=0.123  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV   82 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V   82 (274)
                      ......+++.+++++++++++||+.+|+.+-+.+|..++.-
T Consensus       188 ~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~  228 (254)
T PF08282_consen  188 GSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG  228 (254)
T ss_dssp             HHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET
T ss_pred             HHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc
Confidence            34556678999999999999999999999999999875443

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=82.09  E-value=6.2  Score=34.47  Aligned_cols=75  Identities=15%  Similarity=0.137  Sum_probs=49.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC----CCCC----------CCC------CHHHHHHHHHH---hCCCCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSD----EVRT----------GKP------SPDIFLEAAKR---LNMEPS   57 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~----~~~~----------~KP------~pe~f~~~l~~---l~v~p~   57 (274)
                      +.|+|++..-.++..| ++.|+...|+.|++-.    +-+.          .+.      ......+.+..   -|+.-.
T Consensus        92 ~~IiSDaNs~fI~~iL-~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~  170 (234)
T PF06888_consen   92 LIIISDANSFFIETIL-EHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYD  170 (234)
T ss_pred             EEEEeCCcHhHHHHHH-HhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcc
Confidence            4799999999999877 8889999998888752    1000          011      12233333332   255668


Q ss_pred             cEEEEecCHhhHHHHHHcC
Q 023972           58 SSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus        58 ~~vvvgD~~~di~aA~~aG   76 (274)
                      ++++|||..+|+=.+...+
T Consensus       171 rviYiGDG~nD~Cp~~~L~  189 (234)
T PF06888_consen  171 RVIYIGDGRNDFCPALRLR  189 (234)
T ss_pred             eEEEECCCCCCcCcccccC
Confidence            8999999988875555543

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	274
1nb0_A	147	Crystal Structure Of Human Riboflavin Kinase Length		1e-36
1q9s_A	149	Crystal Structure Of Riboflavin Kinase With Ternary		1e-36
1n05_A	163	Crystal Structure Of Schizosaccharomyces Pombe Ribo		2e-34
3bnw_A	181	Crystal Structure Of Riboflavin Kinase From Trypano		1e-17
3l5k_A	250	The Crystal Structure Of Human Haloacid Dehalogenas		2e-16
2x0k_A	338	Crystal Structure Of Modular Fad Synthetase From Co		3e-13
3zug_A	338	E268d Mutant Of Fad Synthetase From Corynebacterium		7e-13
3e58_A	214	Crystal Structure Of Putative Beta-Phosphoglucomuta		5e-09
1mrz_A	293	Crystal Structure Of A Flavin Binding Protein From		3e-08
4ex6_A	237	Crystal Structure Of The Alnumycin P Phosphatase Al		8e-08
3kbb_A	216	Crystal Structure Of Putative Beta-Phosphoglucomuta		2e-07
1te2_A	226	Putative Phosphatase Ynic From Escherichia Coli K12		2e-07
2i1l_A	293	Crystal Structure Of The C2 Form Of Fad Synthetase		3e-07
3nas_A	233	The Crystal Structure Of Beta-Phosphoglucomutase Fr		9e-07
3dv9_A	247	Putative Beta-Phosphoglucomutase From Bacteroides V		2e-06
2fdr_A	229	Crystal Structure Of Conserved Haloacid Dehalogenas		8e-06
4gib_A	250	2.27 Angstrom Crystal Structure Of Beta-Phosphogluc		2e-05
4g9b_A	243	Crystal Structure Of Beta-Phosphoglucomutase Homolo		1e-04
3d6j_A	225	Crystal Structure Of Putative Haloacid Dehalogenase		2e-04
3r9k_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		2e-04
3qyp_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		2e-04
3quq_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		2e-04
3qu5_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		2e-04
3qut_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		2e-04
3qub_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		2e-04
3qu4_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		2e-04
1o03_A	221	Structure Of Pentavalent Phosphorous Intermediate O		3e-04
3fm9_A	221	Analysis Of The Structural Determinants Underlying		3e-04
1lvh_A	221	The Structure Of Phosphorylated Beta-phosphoglucomu		3e-04

>pdb|1NB0|A Chain A, Crystal Structure Of Human Riboflavin Kinase Length = 147

Iteration: 1
 Score =  150 bits (378), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 103/143 (72%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63
Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 64  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123
Query: 247 VAERALDLPLYSKYRDDPYLKIT 269
            A++ L+LP Y K ++D + +++
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQVS 146

>pdb|1Q9S|A Chain A, Crystal Structure Of Riboflavin Kinase With Ternary Product Complex Length = 149

Iteration: 1
 Score =  150 bits (378), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 103/143 (72%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 6   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 65
Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 66  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 125
Query: 247 VAERALDLPLYSKYRDDPYLKIT 269
            A++ L+LP Y K ++D + +++
Sbjct: 126 EAKKRLELPEYLKIKEDNFFQVS 148

>pdb|1N05|A Chain A, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin Kinase Reveals A Novel Atp And Riboflavin Binding Fold Length = 163

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P    G VV G GRGSK LGIPTAN+S +   ++L    SGVYFG+A +  R V+ MVMS
Sbjct: 23  PIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKR-VFPMVMS 81
Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           +GWNPY+ N  ++ E  L+    EDFY+E + ++++GYIRPE N+  L+ LI  IH D +
Sbjct: 82  VGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIR 141
Query: 247 VAERALDLPLYSKYRDDPYLKI 268
           VA  ++D P YS Y+ DP+ K+
Sbjct: 142 VALNSMDRPSYSSYKKDPFFKV 163

>pdb|3BNW|A Chain A, Crystal Structure Of Riboflavin Kinase From Trypanosoma Brucei Length = 181

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 126 EPWYIGGPVVKGLGRGSKVLGIPTANLSTE-GYSDVLSEHPSGVYFGWAGLS-------- 176
           +P+++ G VV G GRG   LG PTAN+  +    + L  + + V +GW  +S        
Sbjct: 16  QPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWGTVSQVPGKERE 75
Query: 177 TRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLET 236
           + G Y    SIG+N  FD    T+EP+ LHEF  DFY   + ++++G IR   +F SL+ 
Sbjct: 76  SFGPYPFAASIGFNMQFDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQA 135
Query: 237 LIAKIHEDRKVAERALDLPLYSKY 260
           L+  I  D +     L  P   ++
Sbjct: 136 LVDTIKSDVQFTRDMLQKPQLQEF 159

>pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 2   ALASNSHRATIESKISYQHGWNESFS-VIVGSD-EVRTGKPSPDIFLEAAKRLNMEPS-- 57
           ALA++S  A+ + K S    +   FS +++G D EV+ GKP PDIFL  AKR +  P+  
Sbjct: 132 ALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAME 191
Query: 58  SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 116
             LV ED+  GV A  AAGM+VV VP         T A  V+NSL D +PE +GLP ++
Sbjct: 192 KCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250

>pdb|2X0K|A Chain A, Crystal Structure Of Modular Fad Synthetase From Corynebacterium Ammoniagenes Length = 338

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 128 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGW-----------AGLS 176
           +Y+ GPVV+G GRG K LG PTAN   + + D ++    GVY GW             + 
Sbjct: 187 FYVTGPVVRGAGRGGKELGFPTAN---QYFHDTVALPADGVYAGWLTILPTEAPVSGNME 243
Query: 177 TRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLET 236
               Y   +S+G NP F + ++++E ++L   D D Y  ++ +  V ++R    F S+E 
Sbjct: 244 PEVAYAAAISVGTNPTFGDEQRSVESFVLDR-DADLYGHDVKVEFVDHVRAMEKFDSVEQ 302
Query: 237 LIAKIHED 244
           L+  + +D
Sbjct: 303 LLEVMAKD 310

>pdb|3ZUG|A Chain A, E268d Mutant Of Fad Synthetase From Corynebacterium Ammoniagenes Length = 338

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 128 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGW-----------AGLS 176
           +Y+ GPVV+G GRG K LG PTAN   + + D ++    GVY GW             + 
Sbjct: 187 FYVTGPVVRGAGRGGKELGFPTAN---QYFHDTVALPADGVYAGWLTILPTEAPVSGNME 243
Query: 177 TRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLET 236
               Y   +S+G NP F + +++++ ++L   D D Y  ++ +  V ++R    F S+E 
Sbjct: 244 PEVAYAAAISVGTNPTFGDEQRSVDSFVLDR-DADLYGHDVKVEFVDHVRAMEKFDSVEQ 302
Query: 237 LIAKIHED 244
           L+  + +D
Sbjct: 303 LLEVMAKD 310

>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + LAS+S +A I   +  ++     F +++  +E +  KP+P+I+L A K+LN++ S +L
Sbjct: 108 IGLASSSVKADIFRALE-ENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL 166
Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           +IEDS  G+ AG AA +EV A+        + +AA  +++SL D+
Sbjct: 167 IIEDSEKGIAAGVAADVEVWAIRDNEFGXDQ-SAAKGLLDSLTDV 210

>pdb|1MRZ|A Chain A, Crystal Structure Of A Flavin Binding Protein From Thermotoga Maritima, Tm379 Length = 293

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 120 EGTLPSEPWYIG------GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWA 173
           EG +   P Y+G      G V K    G K LG PTAN+     ++ L +   GVY    
Sbjct: 146 EGRVEEIPAYLGRYFEIEGIVHKDREFGRK-LGFPTANIDRG--NEKLVDLKRGVYLVRV 202
Query: 174 GLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPS 233
            L        VM++G+ P   +A        + +F+ D Y + L L ++ ++R E  F S
Sbjct: 203 HLPDGKKKFGVMNVGFRPTVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDS 262
Query: 234 LETLIAKIHEDRKVAERALDLPLYSKY 260
           +E L A I +D K A   +D  + SK+
Sbjct: 263 IEELKAAIDQDVKSARNMIDDIINSKF 289

>pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 16  ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 75
           I+   G +   +VI G D V  GKP PD+ L  A+ L + P   +VI D V     G+AA
Sbjct: 137 IAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAA 196
Query: 76  GMEVVAVP---SLPKQTHRYTAADEVINSL 102
           GM V+ V    S P +  R   AD V++S 
Sbjct: 197 GMTVIGVSYGVSGPDELMR-AGADTVVDSF 225

>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 1   MALASNS-HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           +ALA+++  R  +E     +    + F V V  D+V+ GKP P+I+L   +RLN+ P   
Sbjct: 103 LALATSTPQREALER--LRRLDLEKYFDVXVFGDQVKNGKPDPEIYLLVLERLNVVPEKV 160
Query: 60  LVIEDSVIGVVAGKAAGMEVV 80
           +V EDS  GV A K+AG+E +
Sbjct: 161 VVFEDSKSGVEAAKSAGIERI 181

>pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + LAS S    +E K+       +SF  +  ++++   KP P ++L+ A +L ++P + +
Sbjct: 113 VGLASASPLHXLE-KVLTXFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 171
Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDL 105
            +EDSV G +A KAA    + VP+   Q   R+  A+  ++SL +L
Sbjct: 172 ALEDSVNGXIASKAARXRSIVVPAPEAQNDPRFVLANVKLSSLTEL 217

>pdb|2I1L|A Chain A, Crystal Structure Of The C2 Form Of Fad Synthetase From Thermotoga Maritima Length = 293

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 120 EGTLPSEPWYIG------GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWA 173
           EG +   P Y+G      G V K    G K LG PTAN+     ++ L +   GVY    
Sbjct: 146 EGRVEEIPAYLGRYFEIEGIVHKDREFGRK-LGFPTANIDRG--NEKLVDLKRGVYLVRV 202
Query: 174 GLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPS 233
            L        V ++G+ P   +A        + +F+ D Y + L L ++ + R E  F S
Sbjct: 203 HLPDGKKKFGVXNVGFRPTVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFXRDEKKFDS 262
Query: 234 LETLIAKIHEDRKVAERALDLPLYSKY 260
           +E L A I +D K A   +D  + SK+
Sbjct: 263 IEELKAAIDQDVKSARNXIDDIINSKF 289

>pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + LAS+S  A    KI  +    + F  IV    +  GKP PDIFL AA  L++ P+   
Sbjct: 111 IGLASSSRNA---PKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAXLDVSPADCA 167
Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 108
            IED+  G+ A K+AG   V V     Q      AD V+    DL  E
Sbjct: 168 AIEDAEAGISAIKSAGXFAVGV----GQGQPXLGADLVVRQTSDLTLE 211

>pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 27  SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 86
           ++ V + +V+ GKP+P+ +L A K+   +P+ +LVIE++ +GV AG AAG+  +AV + P
Sbjct: 153 NLXVTAFDVKYGKPNPEPYLXALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGP 212
Query: 87  KQTHRYTAADEVINSLLDLRPE 108
              H     +E  N L    P+
Sbjct: 213 --LHDNVLLNEGANLLFHSXPD 232

>pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 30  VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV----AVPSL 85
           +G+D V   KP PDIFL  A +  + P   +V+EDSV G+   +AAG  V+    A  + 
Sbjct: 137 LGADRV---KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGXRVIGFTGASHTY 193
Query: 86  PKQTHRYT--AADEVINSLLDL 105
           P    R T   A+ VI+   DL
Sbjct: 194 PSHADRLTDAGAETVISRXQDL 215

>pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 21  GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80
           G ++ F  I  + + +  KP P+IFL +AK LN+ P + + IED+  G+ A  +A M  V
Sbjct: 152 GISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSV 211
Query: 81  AV 82
            V
Sbjct: 212 GV 213

>pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 24  ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82
           E F+    + +++  KP P+IFL A   L + P + + IED+  G+ A  A+GM  V +
Sbjct: 134 EFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGI 192

>pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + S  +R  I S +   H  ++ F +I+G ++V   KP P+  L A  RL   P   L
Sbjct: 108 IGIISTKYRFRILSFLR-NHXPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVL 166
Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--ADEVINS---LLDLRPEKWGLP 113
            I DS +      AAG+    V S       + A   D +I++   L+ +  +K G P
Sbjct: 167 YIGDSTVDAGTAAAAGVSFTGVTSGXTTAQEFQAYPYDRIISTLGQLISVPEDKSGCP 224

>pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 86
           ++V + +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 155 LMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 86
           ++V + +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 155 LMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 86
           ++V + +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 155 LMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 86
           ++V + +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 155 LMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 86
           ++V + +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 155 LMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 86
           ++V + +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 155 LMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 28  VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 86
           ++V + +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 155 LMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 26  FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76
           F  I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 132 FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 26  FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76
           F  I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 132 FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 26  FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76
           F  I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 132 FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	274
1nb0_A	147	Hypothetical protein FLJ11149; beta barrel, transf	1e-66
1n08_A	163	Putative riboflavin kinase; phophoryl transferases	2e-66
3bnw_A	181	Riboflavin kinase, putative; APO structure, struct	4e-62
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	4e-48
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	6e-39
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	1e-37
1te2_A	226	Putative phosphatase; structural genomics, phospha	2e-37
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	1e-36
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	1e-33
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	3e-33
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	6e-33
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	4e-32
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	1e-31
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	5e-31
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	3e-30
2x0k_A	338	Riboflavin biosynthesis protein RIBF; riboflavin k	3e-29
3op1_A	308	Macrolide-efflux protein; structural genomics, PSI	9e-29
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	2e-28
1mrz_A	293	Riboflavin kinase/FMN adenylyltransferase; rossman	3e-28
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	3e-20
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	4e-20
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	2e-18
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	6e-18
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	8e-18
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	4e-17
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	4e-16
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	4e-16
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	4e-16
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	9e-16
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	2e-14
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	3e-14
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	3e-14
2hsz_A	243	Novel predicted phosphatase; structural genomics,	3e-14
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	8e-14
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	1e-13
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	1e-13
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	2e-13
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	3e-13
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	4e-13
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	3e-12
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	7e-12
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	1e-11
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	1e-11
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	4e-11
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	5e-11
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	9e-11
2zg6_A	220	Putative uncharacterized protein ST2620, probable	2e-10
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	5e-10
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	6e-10
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	1e-09
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	3e-09
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	4e-09
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	1e-08
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	2e-08
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	2e-07
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	2e-07
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	3e-07
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	7e-06
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	9e-06
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	1e-05
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	2e-05
2o2x_A	218	Hypothetical protein; structural genomics, joint c	3e-05
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	1e-04
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	3e-04
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	5e-04
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	5e-04
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	7e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A* Length = 147

 Score =  202 bits (517), Expect = 1e-66
 Identities = 67/142 (47%), Positives = 102/142 (71%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63

Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 64  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123

Query: 247 VAERALDLPLYSKYRDDPYLKI 268
            A++ L+LP Y K ++D + ++
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQV 145

>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A* Length = 163

 Score =  203 bits (519), Expect = 2e-66
 Identities = 74/168 (44%), Positives = 102/168 (60%), Gaps = 8/168 (4%)

Query: 101 SLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDV 160
           +L + RPE  G        E      P    G VV G GRGSK LGIPTAN+S +   ++
Sbjct: 4   NLEEKRPEIVG-------PEKVQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQEL 56

Query: 161 LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLV 220
           L    SGVYFG+A +  R V+ MVMS+GWNPY+ N  ++ E  L+    EDFY+E + ++
Sbjct: 57  LRYRDSGVYFGYAMVQKR-VFPMVMSVGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVI 115

Query: 221 IVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 268
           ++GYIRPE N+  L+ LI  IH D +VA  ++D P YS Y+ DP+ K+
Sbjct: 116 VLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFKV 163

>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei} Length = 181

 Score =  192 bits (491), Expect = 4e-62
 Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 9/167 (5%)

Query: 115 FQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGY-SDVLSEHPSGVYFGWA 173
               +  T   +P+++ G VV G GRG   LG PTAN+  +    + L  + + V +GW 
Sbjct: 5   HHHHMRQTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWG 64

Query: 174 GLSTR--------GVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYI 225
            +S          G Y    SIG+N  FD    T+EP+ LHEF  DFY   + ++++G I
Sbjct: 65  TVSQVPGKERESFGPYPFAASIGFNMQFDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEI 124

Query: 226 RPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSK 272
           R   +F SL+ L+  I  D +     L  P   ++      +  SS 
Sbjct: 125 RSMGSFHSLQALVDTIKSDVQFTRDMLQKPQLQEFSRHSLFESPSST 171

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score =  159 bits (404), Expect = 4e-48
 Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNMEPSS 58
            ALA++S  A+ + K S    +   FS IV  D  EV+ GKP PDIFL  AKR +  P+ 
Sbjct: 131 FALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAM 190

Query: 59  S--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 116
              LV ED+  GV A  AAGM+VV VP         T A  V+NSL D +PE +GLP ++
Sbjct: 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score =  134 bits (340), Expect = 6e-39
 Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 2/105 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + LAS+S +A I   +  ++     F +++  +E +  KP+P+I+L A K+LN++ S +L
Sbjct: 108 IGLASSSVKADIFRALE-ENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL 166

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           +IEDS  G+ AG AA +EV A+    +     +AA  +++SL D+
Sbjct: 167 IIEDSEKGIAAGVAADVEVWAIRD-NEFGMDQSAAKGLLDSLTDV 210

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score =  132 bits (333), Expect = 1e-37
 Identities = 30/128 (23%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
             + + S + ++  ++++        +++V + +V+ GKP+P+ +L A K+   +P+ +L
Sbjct: 127 PMVVTGSGQTSLLDRLNHNFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEAL 186

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDW 118
           VIE++ +GV AG AAG+  +AV +  L         A+ + +S+ D   + W      + 
Sbjct: 187 VIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDF-NKNW------ET 239

Query: 119 IEGTLPSE 126
           ++  L  +
Sbjct: 240 LQSALKQD 247

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score =  131 bits (331), Expect = 2e-37
 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 2/110 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + LAS S    +E  ++      +SF  +  ++++   KP P ++L+ A +L ++P + +
Sbjct: 113 VGLASASPLHMLEKVLT-MFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 171

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLRPEK 109
            +EDSV G++A KAA M  + VP+   Q   R+  A+  ++SL +L  + 
Sbjct: 172 ALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKD 221

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score =  129 bits (327), Expect = 1e-36
 Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
             + + S + ++  ++ +         ++V + +V+ GKP+P+ +L A K+  ++   ++
Sbjct: 128 PMVVTGSGQLSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAV 187

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 105
           VIE++ +GV AG  AG+  +AV +  L  Q      AD +  S+  L
Sbjct: 188 VIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score =  120 bits (304), Expect = 1e-33
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +ALAS S       +   +      F  I    EV   KP+PDIF+ AA  + + PS S+
Sbjct: 110 IALASASKNGPFLLE---RMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 109
            +EDS  G+ A K +G   + V               ++        E 
Sbjct: 167 GLEDSQAGIQAIKDSGALPIGVGR----PEDLGDDIVIVPDTSHYTLEF 211

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score =  120 bits (302), Expect = 3e-33
 Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + LAS+S  A    KI  +    + F  IV    +  GKP PDIFL AA  L++ P+   
Sbjct: 111 IGLASSSRNAP---KILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCA 167

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 109
            IED+  G+ A K+AGM  V V            AD V+    DL  E 
Sbjct: 168 AIEDAEAGISAIKSAGMFAVGVGQ----GQPMLGADLVVRQTSDLTLEL 212

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score =  117 bits (295), Expect = 4e-32
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 3/109 (2%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
             +A++    T    +      + +   IV  D+V  GKP PD+FL AAK++       L
Sbjct: 110 WCIATSGGIDTATINLK-ALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECL 168

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 107
           VI D++  ++A +      V + S            A  V    LDL  
Sbjct: 169 VIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLN 217

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score =  116 bits (293), Expect = 1e-31
 Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 11/123 (8%)

Query: 1   MALASNSHRATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 58
            A+ SNS R  +  K+    G  E     +   S     GKP PD++  AA++L + P  
Sbjct: 129 FAIGSNSERGRLHLKLR-VAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPER 187

Query: 59  SLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTH----RYTAADEVINSLLDLRP--EKW 110
            +VIEDSV G  AG AAG  +  +  P  P            A  V+ S  +LR    + 
Sbjct: 188 CVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEA 247

Query: 111 GLP 113
           GL 
Sbjct: 248 GLL 250

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score =  114 bits (288), Expect = 5e-31
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 9/109 (8%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + LAS S  A             E F+    + +++  KP P+IFL A   L + P + +
Sbjct: 114 VGLASVSLNAPTILA---ALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACI 170

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 109
            IED+  G+ A  A+GM  V + +        T A  ++ S   L   +
Sbjct: 171 GIEDAQAGIDAINASGMRSVGIGA------GLTGAQLLLPSTESLTWPR 213

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score =  112 bits (282), Expect = 3e-30
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDE---VRTGKPSPDIFLEAAKRLNMEPS 57
             + SNS    ++  ++ + G    F+  + S +       KP PDIFL  A +  + P 
Sbjct: 103 RCICSNSSSHRLDMMLT-KVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPD 161

Query: 58  SSLVIEDSVIGVVAGKAAGMEVVAVPSLP------KQTHRYTAADEVINSLLDLRPEKWG 111
             +V+EDSV G+   +AAGM V+                    A+ VI+ + DL P    
Sbjct: 162 RVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL-PAVIA 220

>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes} Length = 338

 Score =  112 bits (282), Expect = 3e-29
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG------- 179
            +Y+ GPVV+G GRG K LG PTAN        +      GVY GW  +           
Sbjct: 186 HFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALP---ADGVYAGWLTILPTEAPVSGNM 242

Query: 180 ----VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLE 235
                Y   +S+G NP F + ++++E ++L + D D Y  ++ +  V ++R    F S+E
Sbjct: 243 EPEVAYAAAISVGTNPTFGDEQRSVESFVL-DRDADLYGHDVKVEFVDHVRAMEKFDSVE 301

Query: 236 TLIAKIHEDRKVAERAL 252
            L+  + +D +     L
Sbjct: 302 QLLEVMAKDVQKTRTLL 318

>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} Length = 308

 Score =  110 bits (277), Expect = 9e-29
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 8/125 (6%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVM 185
           P    G VV G  RG   +G PTANL     + +    P  GVY     +  +  Y+ + 
Sbjct: 189 PLPSRGMVVHGNARGRT-IGYPTANLVLLDRTYM----PADGVYVVDVEIQRQ-KYRAMA 242

Query: 186 SIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDR 245
           S+G N  FD  E   E  +  +F++D Y E + +  +  IR    F S++ L+ ++  D 
Sbjct: 243 SVGKNVTFDGEEARFEVNIF-DFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADE 301

Query: 246 KVAER 250
           +V   
Sbjct: 302 EVTRN 306

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score =  108 bits (272), Expect = 2e-28
 Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 10/118 (8%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN------- 53
            A+A++  R   +          +     + +++V+ GKP P+ +L+    L        
Sbjct: 134 WAVATSGTRDMAKKWF--DILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQD 191

Query: 54  MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS-LPKQTHRYTAADEVINSLLDLRPEKW 110
              S  +V ED+  G+ AGKAAG ++V + +       +    D ++ +   +R  ++
Sbjct: 192 PSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEY 249

>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A Length = 293

 Score =  108 bits (273), Expect = 3e-28
 Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 7/139 (5%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVM 185
            + I G V K    G K LG PTAN+       V       GVY     L        VM
Sbjct: 159 YFEIEGIVHKDREFGRK-LGFPTANIDRGNEKLVD---LKRGVYLVRVHLPDGKKKFGVM 214

Query: 186 SIGWNPYFDNAEK-TIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 244
           ++G+ P   +A     E ++L +F+ D Y + L L ++ ++R E  F S+E L A I +D
Sbjct: 215 NVGFRPTVGDARNVKYEVYIL-DFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQD 273

Query: 245 RKVAERALDLPLYSKYRDD 263
            K A   +D  + SK+  +
Sbjct: 274 VKSARNMIDDIINSKFEKE 292

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score = 86.5 bits (214), Expect = 3e-20
 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 1/85 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS- 59
           +   +      +   +        + +  V + +V  G+P PD+ L+ A  L +   +  
Sbjct: 130 VGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC 189

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVPS 84
           + ++D++ G+  G  AGM  V V  
Sbjct: 190 IKVDDTLPGIEEGLRAGMWTVGVSC 214

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 82.9 bits (205), Expect = 4e-20
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
             + SN       + I  +   N     ++ S E+   KP    F  AA  +++     +
Sbjct: 37  TVILSNDPGGLGAAPIR-ELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCV 95

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 108
           +++DS++ V     AG+  V      +       A   I  L  L  E
Sbjct: 96  LVDDSILNVRGAVEAGLVGVYYQQFDR-------AVVEIVGLFGLEGE 136

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS- 59
           MA+ SN +   +     +       F  I+GS +  T KPSP+  L A   +N+EPS   
Sbjct: 122 MAIVSNKNGERLR-SEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEV 180

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDL 105
             I DS+  + +   AG   +     ++ K    +    ++ N +  L
Sbjct: 181 FFIGDSISDIQSAIEAGCLPIKYGSTNIIKDILSFKNFYDIRNFICQL 228

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 78.7 bits (195), Expect = 6e-18
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
             L S+ +   +E  I  +      F+ +V S      KP+P+  L   ++  +     L
Sbjct: 101 HFLVSHRNDQVLE--ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GL 156

Query: 61  VIEDSVIGVVAGKAAGMEVVAVP 83
           VI D  I + AG+AAG++     
Sbjct: 157 VIGDRPIDIEAGQAAGLDTHLFT 179

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 78.7 bits (195), Expect = 8e-18
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           + + ++              + +    +V + +D+    KP P   L A +++N+ P ++
Sbjct: 101 LGIVTSQRRNELE--SGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNA 158

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 107
           L I DSV      +AA ++         P   H+           LD+  
Sbjct: 159 LFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQ--KVAHRFQKPLDILE 206

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 8/119 (6%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           + + S       +       H  ++ F +I+G ++V   KP P+  L A  RL   P   
Sbjct: 108 IGIISTKYRFRIL--SFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEV 165

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP---EKWGLP 113
           L I DS +      AAG+    V S     Q  +    D +I++L  L     +K G P
Sbjct: 166 LYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCP 224

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 74.2 bits (183), Expect = 4e-16
 Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 10/108 (9%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
             + ++  + A     I    G    F+ I+ S      KPSP+       +  +   ++
Sbjct: 104 QFIYTHKGNNAF---TILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNT 160

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 107
             I D  + V   + +G++ +               +  I +L D+  
Sbjct: 161 YYIGDRTLDVEFAQNSGIQSINF------LESTYEGNHRIQALADISR 202

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 74.9 bits (184), Expect = 4e-16
 Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 28/134 (20%)

Query: 1   MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           +   +   R  ++     +          +V  D+V  G+P P +  + A  L + P + 
Sbjct: 122 IGSTTGYTREMMDIVAK-EAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH 180

Query: 60  -LVIEDSVIGVVAGKAAGMEVVAVPS-------LPKQTHRYTA----------------- 94
            + + D+V  +  G+ AGM  V V           ++     +                 
Sbjct: 181 MIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVEN 240

Query: 95  -ADEVINSLLDLRP 107
            A   I ++ +L  
Sbjct: 241 GAHFTIETMQELES 254

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score = 74.3 bits (183), Expect = 4e-16
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 6/112 (5%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL---NMEPS 57
           + L + +  A+   K+    G +  F     +D+       P I LE A+R+   N  PS
Sbjct: 113 LGLLTGNFEASGRHKLK-LPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS 171

Query: 58  SSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 107
             ++I D+   +   +      +AV +     +         +  +  +   
Sbjct: 172 QIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDE 223

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 72.8 bits (179), Expect = 9e-16
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 11/105 (10%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           M   +N  R   E +I    G  E       S  +   KP+P ++        + P  ++
Sbjct: 104 MYSLNNEGRDLNEYRIR-TFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           +++D +  V A +A GM             +   A ++   L  L
Sbjct: 163 MVDDRLQNVQAARAVGM----------HAVQCVDAAQLREELAAL 197

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 69.4 bits (170), Expect = 2e-14
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 15/114 (13%)

Query: 1   MALASNSHRATIESKISYQH-----GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 55
           + L SN++   ++  +S +        +  F  +  S ++   KP+ DIFLE      M+
Sbjct: 107 LFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK 166

Query: 56  PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 109
           P  +L I+D    V   +  G            T+     +  I ++  L  E+
Sbjct: 167 PEETLFIDDGPANVATAERLGF----------HTYCPDNGENWIPAITRLLREQ 210

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 69.1 bits (170), Expect = 3e-14
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           +A+ SN     +   KI      +  F +IVG D     KPSP   L+  + L  EP  +
Sbjct: 102 LAVVSNKLEELSK--KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKA 159

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 107
           L++ D+   + AGK AG +        +   +      D  ++   DL  
Sbjct: 160 LIVGDTDADIEAGKRAGTKTALALWGYVKLNSQI---PDFTLSRPSDLVK 206

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 4/108 (3%)

Query: 1   MALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           + + + + R      +    G  + F+   V   +    KP P   L+ A+  ++ PS  
Sbjct: 89  LGILTRNARELAHVTLE-AIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRM 147

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 107
           +++ D    +  G+AAG   V V             D        LR 
Sbjct: 148 VMVGDYRFDLDCGRAAGTRTVLVN--LPDNPWPELTDWHARDCAQLRD 193

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 69.2 bits (170), Expect = 3e-14
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 5/110 (4%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           +A+ +N   +      I    G +  FS ++G   +   KP P  F     +  + P   
Sbjct: 133 LAVVTNKPTKHVQ--PILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQI 190

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 107
           L + DS   + A  +AG  VV +            +  D + +   D+  
Sbjct: 191 LFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 240

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 68.0 bits (167), Expect = 8e-14
 Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           + +A++     +   +I         F  IVGS          D+   A + LN++   +
Sbjct: 105 LVVATSKPTVFSK--QILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162

Query: 60  LVIEDSVIGVVAGKAAGMEVVAV 82
           ++I D    V+      +  + V
Sbjct: 163 IMIGDREYDVIGALKNNLPSIGV 185

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 1   MALASN---SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 57
            A+  N      +     +  + G  E       +DEV + KP  ++F +      ++P 
Sbjct: 118 TAVIGNVMFWPGSYTRLLLE-RFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPE 176

Query: 58  SSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 107
            SL I D+        +  GM  V +     +  +       I S+ +L+ 
Sbjct: 177 ESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKD 227

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + ++ +      KI  +   ++ F  ++ SD     KP P IF +A K  N++P  +L
Sbjct: 113 LGIITDGNPVKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL 171

Query: 61  VIEDSVIG-VVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDL 105
           ++ D +   +   K  GM+ V         ++      AD  I++L  L
Sbjct: 172 MVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 66.5 bits (162), Expect = 2e-13
 Identities = 13/84 (15%), Positives = 25/84 (29%), Gaps = 7/84 (8%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS- 59
            A       A      +           ++ +     G P PD    A   LN+      
Sbjct: 55  CAWIDELPEALSTPLAAPV------NDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGC 108

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVP 83
           ++I      + +G  AG+  + + 
Sbjct: 109 VLISGDPRLLQSGLNAGLWTIGLA 132

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 66.5 bits (163), Expect = 3e-13
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           +A+ SN  + A        +  +  SF   +G       KP+PD+  E  K L +     
Sbjct: 129 LAVVSNKPNEAVQVLV---EELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKC 185

Query: 60  LVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 107
           + I DS I +   + + M+ +AV          +   A  ++++   L  
Sbjct: 186 VYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 65.8 bits (161), Expect = 4e-13
 Identities = 12/105 (11%), Positives = 32/105 (30%), Gaps = 10/105 (9%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + SN++R              ++   I  S ++   KP   I+    +     PS ++
Sbjct: 110 VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
             +D+   +      G+           +        + +    +
Sbjct: 170 FFDDNADNIEGANQLGI----------TSILVKDKTTIPDYFAKV 204

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 63.3 bits (155), Expect = 3e-12
 Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 5/83 (6%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
           + + +           ++     +  F  I GS          D+  +A +   + P  +
Sbjct: 102 LYITTTKDTSTAQ--DMAKNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLAPEQA 157

Query: 60  LVIEDSVIGVVAGKAAGMEVVAV 82
           ++I D+   ++  +  G++ +A+
Sbjct: 158 IIIGDTKFDMLGARETGIQKLAI 180

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 62.8 bits (153), Expect = 7e-12
 Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + ++S      + +    G  + F  I  S+E    KP P IF  A K+  ++   ++
Sbjct: 118 VGMITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176

Query: 61  VIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
            + D+ +      K  GM  + +    ++   +   D +++ L ++
Sbjct: 177 YVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 62.5 bits (152), Expect = 1e-11
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 6/111 (5%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +A+ SN     +E  +    G  E F  ++ S+     KP P IF EA +  +MEP  + 
Sbjct: 125 LAVISNFD-RRLEGILG-GLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA 182

Query: 61  VIEDSVIG-VVAGKAAGMEVVAVP---SLPKQTHRYTAADEVINSLLDLRP 107
            + D+ +      +A GM    V    +L          + ++ SL  L P
Sbjct: 183 HVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLP 233

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 62.0 bits (151), Expect = 1e-11
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSS 59
           + + +N    T   ++    G    F  I  S++    KP  + F    +R+       +
Sbjct: 121 LYIVTNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHT 179

Query: 60  LVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           L+I DS+   +  G+ AG++   +    K           I  L +L
Sbjct: 180 LIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL 226

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 60.2 bits (146), Expect = 4e-11
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 15/107 (14%)

Query: 1   MALASNSHRATIE-----SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 55
           + L SN++    +     +         + F     S E++  KP P+IF    +   ++
Sbjct: 130 VYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID 189

Query: 56  PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 102
           P  +  I+DS I     +  G+           T+   A ++  +  
Sbjct: 190 PKETFFIDDSEINCKVAQELGI----------STYTPKAGEDWSHLF 226

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 60.2 bits (146), Expect = 5e-11
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 4/108 (3%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + L +N  R T   KI         F  IV   E +  KP+P IF      L ++P   +
Sbjct: 139 LLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 197

Query: 61  VIEDSVIG-VVAGKAAGME--VVAVPSLPKQTHRYTAADEVINSLLDL 105
           ++ D++   +  G  AG++  V    S             +++S+L+L
Sbjct: 198 MVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 59.6 bits (145), Expect = 9e-11
 Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 1   MALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-EPSS 58
           + +A++          I      +  F  I GS+   T     ++        N+ +   
Sbjct: 129 LLVATSKPTVFAE--TILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186

Query: 59  SLVIEDSVIGVVAGKAAGMEVVAV 82
            +++ D    ++  K  G++ + V
Sbjct: 187 VIMVGDRKYDIIGAKKIGIDSIGV 210

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 58.6 bits (142), Expect = 2e-10
 Identities = 17/106 (16%), Positives = 45/106 (42%), Gaps = 10/106 (9%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +AL SN+    +++ +  +    + F  +  S E++  KP+P IF  A  ++      ++
Sbjct: 114 LALVSNAS-PRVKTLLE-KFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP---AV 168

Query: 61  VIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
            + D      +  K + ++ + +     +   Y    + + +L + 
Sbjct: 169 HVGDIYELDYIGAKRSYVDPILL----DRYDFYPDVRDRVKNLREA 210

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 57.4 bits (139), Expect = 5e-10
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 3/106 (2%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + SN  R     K+    G +  F  I+ S+++   KP P+IF  A      E   SL
Sbjct: 125 LYILSNGFRELQSRKMR-SAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESL 183

Query: 61  VIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           +I DS    +      GM         +    +      I+SL +L
Sbjct: 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQ-PTYHIHSLKEL 228

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253

 Score = 57.2 bits (138), Expect = 6e-10
 Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 6/119 (5%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
            A+ SN     +++ ++   G  +SF  ++  D  R  KP PD +    + L + P+  L
Sbjct: 110 RAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168

Query: 61  VIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 114
            +  +   V   K  G  V  V      +L ++    T A   +   L +R E +   P
Sbjct: 169 FVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240

 Score = 56.4 bits (136), Expect = 1e-09
 Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 2/106 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +A+ SN +   +++ +      +      + +D+++  KP P I+  A  RL + P+   
Sbjct: 124 VAILSNGNDEMLQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC 182

Query: 61  VIEDSVIGVVAGKAAGMEVVAVP-SLPKQTHRYTAADEVINSLLDL 105
            +  +   +      G   V +        + +      +NSL +L
Sbjct: 183 FVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 55.3 bits (133), Expect = 3e-09
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 4/107 (3%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +A+ SN    +I++ +S+  G  + F  ++  D V+  KP   ++  A + L ++ S+ L
Sbjct: 114 LAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL 172

Query: 61  VIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 105
            +  +       +  G     +       +       D  + SL  +
Sbjct: 173 FVASNAWDATGARYFGFPTCWINRTGNVFEEMGQ-TPDWEVTSLRAV 218

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 55.2 bits (132), Expect = 4e-09
 Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 6/109 (5%)

Query: 1   MALASNSHRATIESKISY--QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 58
           + + S+      +    +  +    E        D     K   + + + A  +    ++
Sbjct: 149 VYIYSSGSVEAQKLLFGHSTEGDILELVDGHF--DTKIGHKVESESYRKIADSIGCSTNN 206

Query: 59  SLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 105
            L + D      A + A + V  V  P     T        +I S  +L
Sbjct: 207 ILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 255

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 54.0 bits (129), Expect = 1e-08
 Identities = 22/139 (15%), Positives = 40/139 (28%), Gaps = 33/139 (23%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSV--IVGSDEVRT-----------GKPSPDIFLE 47
           + +A+               G    F    I  + +V             GKP+P  ++ 
Sbjct: 234 LGIATGRPYTETVVPFE-NLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292

Query: 48  AAKRLN--------------MEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQ 88
           A    N              +      ++ DS+  +++ +  G   +             
Sbjct: 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAG 352

Query: 89  THRYTAADEVINSLLDLRP 107
                 AD VIN L +LR 
Sbjct: 353 ELEAHHADYVINHLGELRG 371

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 18/122 (14%), Positives = 42/122 (34%), Gaps = 18/122 (14%)

Query: 1   MALASN---SHRATIESKISYQHGWNESFSVIVGSD----EVRTGKPSPDIFLEAAKRLN 53
            A+ SN   S    I+  ++   G  + F  I  S+      +  KP   IF      L 
Sbjct: 53  QAILSNTATSDTEVIKRVLT-NFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQ 111

Query: 54  MEPSSSLVIEDSVIG-VVAGKAAGMEVV---------AVPSLPKQTHRYTAADEVINSLL 103
           ++ + ++++ ++    ++    AG+  +             LP     +      +  + 
Sbjct: 112 IDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVP 171

Query: 104 DL 105
           + 
Sbjct: 172 EA 173

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 50.2 bits (119), Expect = 2e-07
 Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 4/110 (3%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS- 59
              A  +H       +     ++          +    KP    F +A K   +    + 
Sbjct: 166 FTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENA 225

Query: 60  LVIEDSVIGVVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDLR 106
             I+DS   +  G   GM+         + +   +      VI+ +L+L 
Sbjct: 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELP 275

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPS-LPKQTHRYTAAD 96
           KP P + L A   L+++ ++S ++ D +  + A  AA +   V V +  P       AAD
Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAAD 190

Query: 97  EVINSLLDL 105
            V+NSL DL
Sbjct: 191 WVLNSLADL 199

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTHRYTA 94
           KP P ++ + A+R +++ +    + DS+  + A   AG     V +              
Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPE 160

Query: 95  ADEVINSLLD 104
              V   L  
Sbjct: 161 GTRVCEDLAA 170

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201

 Score = 44.8 bits (106), Expect = 7e-06
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 6/107 (5%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +   SN     ++  +  ++G    F  I  ++ V+  KPSP ++      +      + 
Sbjct: 91  VYALSNGSINEVKQHLE-RNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147

Query: 61  VIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 105
           ++  +   V+  K AGM  + V   +           D ++N   +L
Sbjct: 148 LVSSNAFDVIGAKNAGMRSIFVNRKNTIVD-PIGGKPDVIVNDFKEL 193

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 45.0 bits (106), Expect = 9e-06
 Identities = 16/113 (14%), Positives = 30/113 (26%), Gaps = 14/113 (12%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + L +       E KI  Q G ++ F  I         +  P  +       ++     +
Sbjct: 130 VVLITKGDLFHQEQKIE-QSGLSDLFPRIEVV-----SEKDPQTYARVLSEFDLPAERFV 183

Query: 61  VIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEV-------INSLLDL 105
           +I +S+   V    A G   +  P      H               +      
Sbjct: 184 MIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW 236

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 15/78 (19%)

Query: 38  GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 96
           GKP    FLEA +  +  P  +++I D     V   +  GM  + V     +T +Y AAD
Sbjct: 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV-----KTGKYKAAD 232

Query: 97  E---------VINSLLDL 105
           E            S    
Sbjct: 233 EEKINPPPYLTCESFPHA 250

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 15/78 (19%)

Query: 38  GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 96
           GKPSP+ F  A + + +E   +++I D ++G V   +  GM  + V     +T ++  +D
Sbjct: 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQV-----RTGKFRPSD 243

Query: 97  E---------VINSLLDL 105
           E          +++L + 
Sbjct: 244 EHHPEVKADGYVDNLAEA 261

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYT 93
           KP+P + +EA KRL ++   SL++ D +  + AGK AG+    +        P    R  
Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPL 196

Query: 94  AADEVINSLLD 104
                +  LL 
Sbjct: 197 RDSSELGDLLA 207

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253

 Score = 41.7 bits (97), Expect = 1e-04
 Identities = 8/67 (11%), Positives = 19/67 (28%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 98
           K     +    + +  + S  L + D+ + + A    G+                   +V
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQV 246

Query: 99  INSLLDL 105
             +   L
Sbjct: 247 YKNFETL 253

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 14/62 (22%), Positives = 24/62 (38%)

Query: 26  FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 85
           F  ++ S +V   KP P I+      L   PS  + ++D    +   +  GM  + V   
Sbjct: 147 FDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 206

Query: 86  PK 87
             
Sbjct: 207 DT 208

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264

 Score = 39.4 bits (93), Expect = 5e-04
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 15/81 (18%)

Query: 38  GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 87
           GKP   I   A   L +E    +++ D+    I   +G   G++ + V S       +P 
Sbjct: 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPT 239

Query: 88  QTHRYTAADEVINSLLDLRPE 108
                     V++SL +   E
Sbjct: 240 LPTP---PTYVVDSLDEWTFE 257

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* Length = 176

 Score = 38.7 bits (91), Expect = 5e-04
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 39  KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77
           KP   +         M+ ++S VI D    +   +  G+
Sbjct: 116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGI 154

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266

 Score = 39.0 bits (92), Expect = 7e-04
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 15/81 (18%)

Query: 38  GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 87
           GKP   I  +A + L  + S +L++ D+    I  +AG  AGM+ + V +       +  
Sbjct: 182 GKPESIIMEQAMRVLGTDVSETLMVGDNYATDI--MAGINAGMDTLLVHTGVTKREHMTD 239

Query: 88  QTHRYTAADEVINSLLDLRPE 108
              +       I+SL +  P 
Sbjct: 240 DMEK---PTHAIDSLTEWIPY 257

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 8e-04
 Identities = 25/184 (13%), Positives = 53/184 (28%), Gaps = 56/184 (30%)

Query: 82  VPSLPK-QTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKG-LG 139
                K    R     ++  +LL+LRP K                    +   ++ G LG
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAK-------------------NV---LIDGVLG 160

Query: 140 RGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT 199
            G   + +            V  +    ++  W  L      + V+ +            
Sbjct: 161 SGKTWVALDVCL-----SYKVQCKMDFKIF--WLNLKNCNSPETVLEMLQK--------- 204

Query: 200 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSK 259
               LL++ D ++     H         +    S++  + ++ + +   E  L L L   
Sbjct: 205 ----LLYQIDPNWTSRSDHS-----SNIKLRIHSIQAELRRLLKSKPY-ENCL-LVL--- 250

Query: 260 YRDD 263
              +
Sbjct: 251 --LN 252

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	274
2x0k_A	338	Riboflavin biosynthesis protein RIBF; riboflavin k	100.0
3bnw_A	181	Riboflavin kinase, putative; APO structure, struct	100.0
1n08_A	163	Putative riboflavin kinase; phophoryl transferases	100.0
3op1_A	308	Macrolide-efflux protein; structural genomics, PSI	100.0
1nb0_A	147	Hypothetical protein FLJ11149; beta barrel, transf	100.0
1mrz_A	293	Riboflavin kinase/FMN adenylyltransferase; rossman	100.0
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.56
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.55
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.55
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.52
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.51
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.5
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.47
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.47
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.46
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.46
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.45
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.45
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.45
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.45
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.44
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.44
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.43
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.43
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.42
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.41
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.41
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.41
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.41
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.41
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.38
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.38
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.37
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.37
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.37
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.37
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.37
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.36
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.34
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.34
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.34
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.34
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.34
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.34
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.34
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.33
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.33
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.31
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.31
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.3
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.3
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.29
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.28
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.28
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.27
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.27
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.26
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.26
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.24
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.23
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.23
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.21
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.2
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.2
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.19
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.19
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.14
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.12
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.12
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.12
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.11
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.1
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.08
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.05
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.04
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.02
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.0
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	98.94
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.85
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.84
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	98.82
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	98.82
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.81
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	98.81
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	98.78
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.75
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.74
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.73
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	98.72
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.69
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.68
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.67
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.66
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.63
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.61
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.59
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.57
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.56
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.52
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.5
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.49
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.48
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.46
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	98.45
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.45
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.4
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.37
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.36
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.35
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	98.29
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	97.49
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.11
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.09
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	97.98
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	97.97
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.97
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.94
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	97.84
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	97.75
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	97.64
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.62
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.49
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	97.38
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	97.29
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.29
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	96.86
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	96.56
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	96.36
3dao_A	283	Putative phosphatse; structural genomics, joint ce	96.13
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	96.02
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	95.94
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	95.93
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	95.81
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	95.21
3glv_A	143	Lipopolysaccharide core biosynthesis protein; stru	95.14
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	95.07
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	95.05
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	94.76
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	94.42
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	93.92
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	93.78
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	92.65
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	92.03
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	91.97
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	91.63
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	89.94
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	89.82
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	89.02
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	87.78
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	86.38
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	84.9
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	83.35

>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}

Probab=100.00  E-value=1.7e-54  Score=394.22  Aligned_cols=235  Identities=23%  Similarity=0.370  Sum_probs=192.7

Q ss_pred             HHHHcCCCCCCcEEEe-cCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH----------HHHHHcCCEEEEecC
Q 023972           16 ISYQHGWNESFSVIVG-SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV----------VAGKAAGMEVVAVPS   84 (274)
Q Consensus        16 l~~~~gl~~~Fd~v~~-~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di----------~aA~~aGi~vi~V~~   84 (274)
                      +++.+|+    |.++. ..+...+..+|+.|++.+..-.+.++.++++.|+.||.          +.+++ |+.++.++.
T Consensus        80 ll~~~gV----D~v~v~~F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~-g~~V~~v~~  154 (338)
T 2x0k_A           80 LAESFGI----DGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQS-RLTVDVIDL  154 (338)
T ss_dssp             HHHHTTC----SEEEEECTTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTT-TSEEEEECC
T ss_pred             HHHhcCC----CEEEEccccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcC-CeEEEEECc
Confidence            3355664    55444 33445678999999975322223446777778998762          34556 999999998


Q ss_pred             CCCcccccccccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCC
Q 023972           85 LPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEH  164 (274)
Q Consensus        85 ~~~~~~~iSss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~  164 (274)
                      ...++..+||+ .|++.+.++++..          |+.||||||+++|+|+||++||+|+||||||||.++.. +++|+ 
T Consensus       155 ~~~~~~~ISST-~IR~~L~~G~i~~----------a~~lLGrpy~i~G~Vv~G~~~Gsr~lGfPTANl~~~~~-~~~P~-  221 (338)
T 2x0k_A          155 LDDEGVRISST-TVREFLSEGDVAR----------ANWALGRHFYVTGPVVRGAGRGGKELGFPTANQYFHDT-VALPA-  221 (338)
T ss_dssp             CEETTEECSHH-HHHHHHHTTCHHH----------HHHHHTSCCEEEEECBCCSSCSSSCTTSCSEEEEECTT-BCCCC-
T ss_pred             EecCCcccccc-hHHHHHhcCcHHH----------HHHhcceeeEEEEEEecCcccccceecccccccCCccc-ccCCC-
Confidence            77667778886 6777788898886          99999999999999999999994479999999977653 67785 


Q ss_pred             CCceEEEEEEEcC-----------CeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCC
Q 023972          165 PSGVYFGWAGLST-----------RGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPS  233 (274)
Q Consensus       165 ~~GvY~~~~~~~~-----------~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~  233 (274)
                       .|||++|+.++.           +.+|+||+|||+||||++...++|||||| |++||||++|+|+|++|||+|+||+|
T Consensus       222 -~GVYa~~v~~~~~~~~~~~~~~~~~~~~gv~niG~~PT~~~~~~~vE~hild-f~~dlYg~~i~v~f~~~lR~e~kF~s  299 (338)
T 2x0k_A          222 -DGVYAGWLTILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRSVESFVLD-RDADLYGHDVKVEFVDHVRAMEKFDS  299 (338)
T ss_dssp             -SEEEEEEEEECSCCSCCEESCCTTCEEEEEEEEEEETTTCTTEEEEEEEETT-CCEECTTCEEEEEEEEEEECCCCCSS
T ss_pred             -CeEEEEEEEECccccccccccCCCCEEEEEEEEcCCCccCCCcceEEEEeec-CCcccCCCEEEEEEehhhCCccCCCC
Confidence             899999999862           57899999999999998767789999996 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCC--ccccCCCCCCCCcccc
Q 023972          234 LETLIAKIHEDRKVAERALDL--PLYSKYRDDPYLKITS  270 (274)
Q Consensus       234 ~~~l~~qi~~D~~~a~~~~~~--~~~~~~~~~~~~~~~~  270 (274)
                      +|+|++||++|++.||++|+.  +.+...+++.|+|+.|
T Consensus       300 ~e~L~~qi~~D~~~ar~~l~~~~~~~~~~~~~~~~~~~~  338 (338)
T 2x0k_A          300 VEQLLEVMAKDVQKTRTLLAQDVQAHKMAPETYFLQAES  338 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTTTSCSSEECCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccChHHhhhhccC
Confidence            999999999999999999965  4456677888888754

>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei}

Probab=100.00  E-value=6.1e-54  Score=354.79  Aligned_cols=152  Identities=33%  Similarity=0.590  Sum_probs=126.0

Q ss_pred             ccCCCCCCceeEeEEEEeccCCCccccCccceecCCC---CCCCCCCCCCCceEEEEEEEcC--------CeEEEEEEEe
Q 023972          119 IEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTE---GYSDVLSEHPSGVYFGWAGLST--------RGVYKMVMSI  187 (274)
Q Consensus       119 ~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~---~~~~~~p~~~~GvY~~~~~~~~--------~~~~~~~~~i  187 (274)
                      +-++||||||.++|+||||++|||++||||||||.++   ....++|.  .|||++|+.+++        +.+|+||+||
T Consensus         9 ~~~~lLGrpy~i~G~Vv~G~~rGrr~LGfPTANl~l~~~~~~~~~~p~--~GVYa~~v~~~~~~~~~~~~~~~~~gv~nI   86 (181)
T 3bnw_A            9 MRQTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYK--NLVVYGWGTVSQVPGKERESFGPYPFAASI   86 (181)
T ss_dssp             CCCCTTSCCEEEEEEEEC------CCSCCCCCEECCCHHHHHHHGGGT--TEEEEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred             HHHHhCCCCeEEEEEEEeCCccCccccCCccccccccccccccccCCC--CEEEEEEEEECCcccccccCCceeEEEEEe
Confidence            3578999999999999999999977899999999742   21123354  899999999854        2689999999


Q ss_pred             cCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCc
Q 023972          188 GWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  267 (274)
Q Consensus       188 G~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~  267 (274)
                      |+||||++.+.+|||||||||++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.+.|.+|++|.||+
T Consensus        87 G~nPTf~~~~~~vEvhilhDF~~DlYG~~i~V~fl~~LR~E~kF~sle~L~~QI~~Di~~Ar~~l~~~~~~~~~~~~~f~  166 (181)
T 3bnw_A           87 GFNMQFDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQALVDTIKSDVQFTRDMLQKPQLQEFSRHSLFE  166 (181)
T ss_dssp             ECC------CCEEEEEESSCCSSCCTTCEEEEEEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCTTTS
T ss_pred             cCCCeECCCeeEEEEEEcCCCCCccCCCEEEEEEehhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCccccccccCcccc
Confidence            99999987778899999955999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCC
Q 023972          268 ITSSK  272 (274)
Q Consensus       268 ~~~~~  272 (274)
                      .|++|
T Consensus       167 ~~~~~  171 (181)
T 3bnw_A          167 SPSST  171 (181)
T ss_dssp             CCCCC
T ss_pred             Ccccc
Confidence            98887

>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*

Probab=100.00  E-value=2e-52  Score=340.95  Aligned_cols=143  Identities=46%  Similarity=0.851  Sum_probs=131.3

Q ss_pred             CCCCCceeEeEEEEeccCCCccccCccceecCCCC--CCCCCCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCce
Q 023972          122 TLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEG--YSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT  199 (274)
Q Consensus       122 ~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~--~~~~~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~  199 (274)
                      .++||||.++|+|+||++|||++||||||||.++.  ...++|.  .|||++|+.+++ .+|+||+|||+||||++...+
T Consensus        18 ~~~Grpy~i~G~Vv~G~~rGrr~LGfPTANl~~~~~~~~~~~p~--~GVYa~~v~~~~-~~~~gv~nIG~~PTf~~~~~~   94 (163)
T 1n08_A           18 VQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRD--SGVYFGYAMVQK-RVFPMVMSVGWNPYYKNKLRS   94 (163)
T ss_dssp             CCTTCCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTSC--SEEEEEEEEETT-EEEEEEEEEEECTTCSSCCEE
T ss_pred             CCCCCCEEEEEEEEeCCccCCCccCcCCCcccCcccccccCCCC--CEEEEEEEEECC-EEEEEEEEeCCCCeECCCceE
Confidence            67899999999999999999878999999997742  2124454  899999999965 889999999999999877788


Q ss_pred             eeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCc
Q 023972          200 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  267 (274)
Q Consensus       200 ~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~  267 (274)
                      |||||||||++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.+.|..|++|.||+
T Consensus        95 vEvhil~df~~dlYG~~i~V~f~~~lR~E~kF~sle~L~~qI~~D~~~ar~~l~~~~~~~~~~~~~~~  162 (163)
T 1n08_A           95 AEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK  162 (163)
T ss_dssp             EEEEETTCCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCGGGC
T ss_pred             EEEEEecCCCCccCCCEEEEEEHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhccchhhcccchhhc
Confidence            99999955999999999999999999999999999999999999999999999999999999999997

>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}

Probab=100.00  E-value=3.3e-53  Score=379.61  Aligned_cols=212  Identities=24%  Similarity=0.336  Sum_probs=171.0

Q ss_pred             HHHHcCCCCCCcEEEe-cCCCCCCCCCHHHHHH-HHHHhCCCCCcEEEEecCHhhHHHH------HHcCC-EEEEecCCC
Q 023972           16 ISYQHGWNESFSVIVG-SDEVRTGKPSPDIFLE-AAKRLNMEPSSSLVIEDSVIGVVAG------KAAGM-EVVAVPSLP   86 (274)
Q Consensus        16 l~~~~gl~~~Fd~v~~-~~~~~~~KP~pe~f~~-~l~~l~v~p~~~vvvgD~~~di~aA------~~aGi-~vi~V~~~~   86 (274)
                      +++.+|+    |.++. ..+...+..+|+.|++ .+.++++  +.++++.|++||. .+      +++|- .++.++...
T Consensus        87 ll~~lGV----D~v~~~~F~~~~a~ls~e~Fv~~ll~~l~~--~~ivvG~DfrFG~-r~G~~~~L~~~~~~~V~~v~~~~  159 (308)
T 3op1_A           87 KLKREGV----EELYLLDFSSQFASLTAQEFFATYIKAMNA--KIIVAGFDYTFGS-DKKTAEDLKNYFDGEVIIVPPVE  159 (308)
T ss_dssp             HHHHHTC----CEEEEECCCHHHHTCCHHHHHHHHHHHHTE--EEEEEETTCCBTT-TTBCSTTHHHHCSSEEEEECCCB
T ss_pred             HHHHcCC----CEEEEecCCHHHHcCCHHHHHHHHHHHcCC--CEEEECcCCCCCC-cCCCHHHHHHhCCCCEEEeCCEe
Confidence            3366665    55544 3333467889999997 5666765  6777778999875 32      23332 688888877


Q ss_pred             CcccccccccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCC
Q 023972           87 KQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS  166 (274)
Q Consensus        87 ~~~~~iSss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~  166 (274)
                      .++..+||+ .|++.+.++++..          |++||||||+++|+|+||+++|| +||||||||.+++. +++|+  .
T Consensus       160 ~~~~~ISST-~IR~~L~~G~v~~----------A~~lLGrpy~i~G~Vv~G~~~Gr-~lGfPTANl~~~~~-~~~P~--~  224 (308)
T 3op1_A          160 DEKGKISST-RIRQAILDGNVKE----------AGKLLGAPLPSRGMVVHGNARGR-TIGYPTANLVLLDR-TYMPA--D  224 (308)
T ss_dssp             CSSCBCCHH-HHHHHHHHTCHHH----------HHHHHSSCCEEEEEEEBCC-------CCCCEEEEECSS-BCCCC--S
T ss_pred             cCCceEeHH-HHHHHHHcCCHHH----------HHhhcCcceeEEEEEEECCccCc-ccCCCcEeecCccc-ccCCC--C
Confidence            677788885 7777788899987          99999999999999999999996 79999999998764 67786  8


Q ss_pred             ceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHH
Q 023972          167 GVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK  246 (274)
Q Consensus       167 GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~  246 (274)
                      ||||+|+.++ +.+|+||+|||+||||++.+.++|||||| |++||||++|+|+|++|||+|+||+|+|+|++||++|++
T Consensus       225 GVYa~~v~~~-~~~~~gv~niG~~PT~~~~~~~vE~hild-f~~dlYG~~i~v~f~~~lR~e~kF~s~e~L~~Qi~~D~~  302 (308)
T 3op1_A          225 GVYVVDVEIQ-RQKYRAMASVGKNVTFDGEEARFEVNIFD-FNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEE  302 (308)
T ss_dssp             EEEEEEEEET-TEEEEEEEEECBTTTBC--CCEEEEEETT-CCCCCTTCEEEEEEEEEEECCCCCSSHHHHHHHHHHHHH
T ss_pred             ceEEEEEEEC-CEEEEEEEEeccCCccCCCceEEEEEEec-CCCccCCCEEEEEEHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            9999999997 48999999999999998777899999996 999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q 023972          247 VAERA  251 (274)
Q Consensus       247 ~a~~~  251 (274)
                      .||++
T Consensus       303 ~ar~~  307 (308)
T 3op1_A          303 VTRNW  307 (308)
T ss_dssp             HHHHC
T ss_pred             HHHhh
Confidence            99974

>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*

Probab=100.00  E-value=7.3e-53  Score=338.59  Aligned_cols=141  Identities=49%  Similarity=0.943  Sum_probs=129.3

Q ss_pred             CceeEeEEEEeccCCCccccCccceecCCCCCCCCCCC-CCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeE
Q 023972          126 EPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSE-HPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWL  204 (274)
Q Consensus       126 rpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~-~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i  204 (274)
                      +||.++|+|+||++|||++||||||||.++.. .++|. ++.|||++|+.+.++.+|+||+|||+||||++...+|||||
T Consensus         3 ~py~i~G~Vv~G~~rGrr~LGfPTANl~~~~~-~~~P~~~~~GVYa~~v~~~~~~~~~gv~nIG~~PT~~~~~~~vEvhi   81 (147)
T 1nb0_A            3 LPYFCRGQVVRGFGRGSKQLGIPTANFPEQVV-DNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETHI   81 (147)
T ss_dssp             CSEEEEEECBCCSSSCGGGGTCCCEECCHHHH-HTSCTTCCSEEEEEEEEETTCCCEEEEEEEEECSSSSSSCEEEEEEE
T ss_pred             ccEEEEEEEEeCCccCccccCCccEEEEcccc-ccCCCCCCCEEEEEEEEECCCCEEEEEEEecCCCeECCCceEEEEEE
Confidence            89999999999999997789999999976432 45661 24899999999865678999999999999987777899999


Q ss_pred             cccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCc
Q 023972          205 LHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  267 (274)
Q Consensus       205 ~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~  267 (274)
                      ||||++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.+.|..|++|.||+
T Consensus        82 l~df~~dlYG~~i~v~f~~~lR~E~kF~sle~L~~qI~~D~~~ar~~l~~~~~~~~~~~~~~~  144 (147)
T 1nb0_A           82 MHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQ  144 (147)
T ss_dssp             SSCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGGCHHHH
T ss_pred             ecCCCCccCCCEEEEEEehhccCCcCCCCHHHHHHHHHHHHHHHHHHHhCcchhhcccchhhc
Confidence            955999999999999999999999999999999999999999999999999999999999999

>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A

Probab=100.00  E-value=8.2e-52  Score=369.53  Aligned_cols=197  Identities=27%  Similarity=0.348  Sum_probs=151.7

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh------HHHHHHcCCEEEEecCCCCcccccccccEEEecccccccccc
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG------VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW  110 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d------i~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e~~~~~~  110 (274)
                      .+..+|+.|++.+.   +.++.++++.|+.||      .+.-++.|+.++.++.....+..+||+ .|++.+.++++.. 
T Consensus        77 ~a~ls~~~Fi~~il---l~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST-~IR~~L~~G~i~~-  151 (293)
T 1mrz_A           77 IKDLTPEGFVERYL---SGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSS-LIRNLVQEGRVEE-  151 (293)
T ss_dssp             HTTCCHHHHHHHHC---TTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHH-HHHHHHHTTCTTT-
T ss_pred             hhcCCHHHHHHHHh---cCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCEEeCCccccHh-HHHHHHhcCcHHH-
Confidence            46789999998654   456788888999875      344445899999999876666778886 6777777888876 


Q ss_pred             CCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEE-cCCeEEEEEEEecC
Q 023972          111 GLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL-STRGVYKMVMSIGW  189 (274)
Q Consensus       111 ~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~-~~~~~~~~~~~iG~  189 (274)
                               |+.||||||.++|+|+||+++|| +||||||||.+++...++|+  .|||++|+.+ + +.+|+||+|||+
T Consensus       152 ---------a~~lLGr~y~i~G~Vv~G~~~Gr-~lGfPTaNl~~~~~~~~~P~--~GVYa~~v~~~~-~~~~~gv~niG~  218 (293)
T 1mrz_A          152 ---------IPAYLGRYFEIEGIVHKDREFGR-KLGFPTANIDRGNEKLVDLK--RGVYLVRVHLPD-GKKKFGVMNVGF  218 (293)
T ss_dssp             ---------THHHHSSCCEEEEEC------------CCCEECBCCSSCBCCCC--SEEEEEEEECGG-GCEEEEEEEEEE
T ss_pred             ---------HhhhcCCCeEEEEEEccCccccc-eecccceEeccCccCcCCCC--CeEEEEEEEEec-CcEEEEEEEecc
Confidence                     99999999999999999999997 69999999987622367785  8999999998 5 478999999999


Q ss_pred             CCeecCC-CceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHc
Q 023972          190 NPYFDNA-EKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERAL  252 (274)
Q Consensus       190 ~pt~~~~-~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~  252 (274)
                      ||||++. ..++|||||| |++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|
T Consensus       219 ~PT~~~~~~~~iE~hild-f~~dlYg~~i~v~f~~~lR~e~kF~s~~~L~~qi~~D~~~a~~~l  281 (293)
T 1mrz_A          219 RPTVGDARNVKYEVYILD-FEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMI  281 (293)
T ss_dssp             C------CCEEEEEEETT-CCSCCTTCEEEEEEEEEEECCCC----CCHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCccceEEEEecc-CCcccCCCEEEEEEHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999875 4789999996 999999999999999999999999999999999999999999998

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.56  E-value=8.2e-15  Score=122.99  Aligned_cols=87  Identities=34%  Similarity=0.532  Sum_probs=79.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+.++||.++++++++..||+|+.|..+++++|++|++|+||||+..|+++|+++|+.+|
T Consensus       103 ~~i~tn~~~~~~~~~l-~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i  181 (216)
T 3kbb_A          103 LALATSTPQREALERL-RRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERI  181 (216)
T ss_dssp             EEEECSSCHHHHHHHH-HHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCE
T ss_pred             cccccCCcHHHHHHHH-HhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEE
Confidence            4899999999988777 889999999999999999999999999999999999999999999999999999999999988


Q ss_pred             E-ecCCCCc
Q 023972           81 A-VPSLPKQ   88 (274)
Q Consensus        81 ~-V~~~~~~   88 (274)
                      + +.++...
T Consensus       182 ~~v~~g~~~  190 (216)
T 3kbb_A          182 YGVVHSLND  190 (216)
T ss_dssp             EEECCSSSC
T ss_pred             EEecCCCCC
Confidence            5 6665443

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.55  E-value=1.3e-14  Score=125.45  Aligned_cols=93  Identities=29%  Similarity=0.433  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCcc
Q 023972           10 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT   89 (274)
Q Consensus        10 ~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~~   89 (274)
                      ..+...| +++|+.++||.++++++++..||+|+.|..+++++|++|++|+||||+..|+++|+++|+.+++|...    
T Consensus       142 ~~~~~~L-~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~----  216 (250)
T 4gib_A          142 KNAINVL-NHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNY----  216 (250)
T ss_dssp             TTHHHHH-HHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCT----
T ss_pred             chhhhHh-hhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECCh----
Confidence            3344456 88899999999999999999999999999999999999999999999999999999999999999653    


Q ss_pred             cccccccEEEeccccccc
Q 023972           90 HRYTAADEVINSLLDLRP  107 (274)
Q Consensus        90 ~~iSss~~ii~~l~e~~~  107 (274)
                      ...+.++.+++++.++.+
T Consensus       217 ~~~~~ad~vi~~l~eL~~  234 (250)
T 4gib_A          217 ENLKKANLVVDSTNQLKF  234 (250)
T ss_dssp             TTTTTSSEEESSGGGCCH
T ss_pred             hHhccCCEEECChHhCCH
Confidence            223457799999988754

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.55  E-value=1e-14  Score=122.61  Aligned_cols=102  Identities=14%  Similarity=0.243  Sum_probs=87.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+..+||.+++++  ...||+|+.|..+++++|++|++|++|||+..|+++|+++|+.++
T Consensus       102 l~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i  178 (210)
T 2ah5_A          102 LYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL  178 (210)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             EEEEeCCCHHHHHHHH-HhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEE
Confidence            4799999998888766 7889999999999988  789999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      ++.++......  ...++.+++++.++
T Consensus       179 ~v~~~~~~~~~l~~~~a~~v~~~~~el  205 (210)
T 2ah5_A          179 AITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             EESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             EEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            99876432222  13466888887764

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.52  E-value=1.2e-14  Score=125.28  Aligned_cols=84  Identities=30%  Similarity=0.427  Sum_probs=75.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||+...  ...| +++|+.++||.++++++++..||+|+.|..+++++|++|++|+||||+..|+++|+++|+.+|
T Consensus       114 i~i~t~~~~~--~~~l-~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I  190 (243)
T 4g9b_A          114 VGLASVSLNA--PTIL-AALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSV  190 (243)
T ss_dssp             EEECCCCTTH--HHHH-HHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             ceecccccch--hhhh-hhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEE
Confidence            3677877654  3345 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCC
Q 023972           81 AVPSLPK   87 (274)
Q Consensus        81 ~V~~~~~   87 (274)
                      +|.++..
T Consensus       191 ~V~~g~~  197 (243)
T 4g9b_A          191 GIGAGLT  197 (243)
T ss_dssp             EESTTCC
T ss_pred             EECCCCC
Confidence            9988643

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.51  E-value=1e-13  Score=115.10  Aligned_cols=104  Identities=20%  Similarity=0.309  Sum_probs=88.0

Q ss_pred             CEEEcCCCh---HHHHHHHHHHcCCCCCCcEEEecCCC----CCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHH
Q 023972            1 MALASNSHR---ATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAG   72 (274)
Q Consensus         1 laIvSn~~~---~~~~~~l~~~~gl~~~Fd~v~~~~~~----~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA   72 (274)
                      ++|+||.+.   ..+...+ +++|+..+||.++++++.    ...||+|+.|..++++++++|++|++|||+ ..|+.+|
T Consensus        53 ~~i~Tn~~~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A  131 (189)
T 3ib6_A           53 QAILSNTATSDTEVIKRVL-TNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGA  131 (189)
T ss_dssp             EEEEECCSSCCHHHHHHHH-HHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHH
T ss_pred             EEEEECCCccchHHHHHHH-HhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHH
Confidence            479999987   7777666 889999999999999986    789999999999999999999999999999 6999999


Q ss_pred             HHcCCEEEEecCCCCcc--cc--cccccEEEe--ccccc
Q 023972           73 KAAGMEVVAVPSLPKQT--HR--YTAADEVIN--SLLDL  105 (274)
Q Consensus        73 ~~aGi~vi~V~~~~~~~--~~--iSss~~ii~--~l~e~  105 (274)
                      +++|+.++++.......  ..  ...++.++.  ++.++
T Consensus       132 ~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l  170 (189)
T 3ib6_A          132 NRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV  170 (189)
T ss_dssp             HHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGH
T ss_pred             HHCCCeEEEECCccccccccccccCCCcceeccccHHhH
Confidence            99999999998764321  11  225678888  77664

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.50  E-value=1.5e-13  Score=119.72  Aligned_cols=104  Identities=24%  Similarity=0.388  Sum_probs=89.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCC-E
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGM-E   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi-~   78 (274)
                      ++|+||+++..+...+ +++|+..+||.+++++++...||+|+.|..++++++++|++|+||||+ ..|+++|+++|+ .
T Consensus       139 l~i~Tn~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~  217 (260)
T 2gfh_A          139 LLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKA  217 (260)
T ss_dssp             EEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSE
T ss_pred             EEEEECcChHHHHHHH-HhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCce
Confidence            5899999999888767 788999999999999999999999999999999999999999999995 899999999999 8


Q ss_pred             EEEecCCCCccc-ccccccEEEeccccc
Q 023972           79 VVAVPSLPKQTH-RYTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~-~iSss~~ii~~l~e~  105 (274)
                      ++++........ ....++.++.++.++
T Consensus       218 ~i~v~~~~~~~~~~~~~~~~~i~~~~el  245 (260)
T 2gfh_A          218 TVWINKSGRVPLTSSPMPHYMVSSVLEL  245 (260)
T ss_dssp             EEEECTTCCCCSSCCCCCSEEESSGGGH
T ss_pred             EEEEcCCCCCcCcccCCCCEEECCHHHH
Confidence            999976432211 224466888888775

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.47  E-value=1.6e-13  Score=120.01  Aligned_cols=105  Identities=12%  Similarity=0.059  Sum_probs=86.8

Q ss_pred             CEEEcCCChHHHHHHHHHH---cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQ---HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~---~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||+++..+...+ ++   .|+.++||.++++ +++ .||+|+.|..++++++++|++|+||||+..|+.+|+++|+
T Consensus       149 ~~i~Tn~~~~~~~~~l-~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~  225 (261)
T 1yns_A          149 VYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADV  225 (261)
T ss_dssp             EEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred             EEEEeCCCHHHHHHHH-HhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCC
Confidence            4799999998887666 64   4699999999999 888 9999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCccc--ccccccEEEecccccccc
Q 023972           78 EVVAVPSLPKQTH--RYTAADEVINSLLDLRPE  108 (274)
Q Consensus        78 ~vi~V~~~~~~~~--~iSss~~ii~~l~e~~~~  108 (274)
                      .++++.+......  ....++.+++++.++.+.
T Consensus       226 ~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~~~  258 (261)
T 1yns_A          226 HVAVVVRPGNAGLTDDEKTYYSLITSFSELYLP  258 (261)
T ss_dssp             EEEEECCTTCCCCCHHHHHHSCEESSGGGCBC-
T ss_pred             EEEEEeCCCCCcccccccCCCEEECCHHHhCcC
Confidence            9999976432211  113456788998887553

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.47  E-value=4.1e-13  Score=110.95  Aligned_cols=103  Identities=35%  Similarity=0.535  Sum_probs=91.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.....+...+ +++|+..+|+.++++++....||+|+.|..++++++++|++|++|||+..|+.+|+++|+.++
T Consensus       108 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~  186 (214)
T 3e58_A          108 IGLASSSVKADIFRAL-EENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVW  186 (214)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEE
T ss_pred             EEEEeCCcHHHHHHHH-HHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEE
Confidence            4799999999888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++......... ..++.+++++.++
T Consensus       187 ~~~~~~~~~~~-~~a~~~~~~~~el  210 (214)
T 3e58_A          187 AIRDNEFGMDQ-SAAKGLLDSLTDV  210 (214)
T ss_dssp             EECCSSSCCCC-TTSSEEESSGGGG
T ss_pred             EECCCCccchh-ccHHHHHHHHHHH
Confidence            99875333322 5567899988775

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.46  E-value=4.2e-13  Score=113.18  Aligned_cols=104  Identities=20%  Similarity=0.242  Sum_probs=92.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC-CCCCcEEEEecCH-hhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEPSSSLVIEDSV-IGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~-v~p~~~vvvgD~~-~di~aA~~aGi~   78 (274)
                      ++|+||..+..+...+ +.+|+..+|+.++++++.+..||+|+.|..+++++| ++|+++++|||+. +|+.+|+.+|+.
T Consensus       121 ~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~  199 (238)
T 3ed5_A          121 LYIVTNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLD  199 (238)
T ss_dssp             EEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCE
T ss_pred             EEEEeCCCHHHHHHHH-HHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCE
Confidence            4799999999888766 788999999999999999999999999999999999 9999999999998 899999999999


Q ss_pred             EEEecCCCCcccccccccEEEeccccc
Q 023972           79 VVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++++..+.........++.+++++.++
T Consensus       200 ~i~~~~~~~~~~~~~~ad~v~~~~~el  226 (238)
T 3ed5_A          200 TCWMNPDMKPNVPEIIPTYEIRKLEEL  226 (238)
T ss_dssp             EEEECTTCCCCTTCCCCSEEESSGGGH
T ss_pred             EEEECCCCCCCcccCCCCeEECCHHHH
Confidence            999988644444445667899999875

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.46  E-value=4.4e-13  Score=113.48  Aligned_cols=103  Identities=25%  Similarity=0.301  Sum_probs=90.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||..+..+...+ +++|+.++|+.+++++++...||+|+.|..++++++++|++|++|||+..|+.+|+++|+.++
T Consensus       102 ~~i~s~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i  180 (222)
T 2nyv_A          102 LAVVSNKLEELSKKIL-DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTA  180 (222)
T ss_dssp             EEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             EEEEcCCCHHHHHHHH-HHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEE
Confidence            4799999998888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++.++...... ..++.+++++.++
T Consensus       181 ~v~~g~~~~~~-~~~~~~~~~~~el  204 (222)
T 2nyv_A          181 LALWGYVKLNS-QIPDFTLSRPSDL  204 (222)
T ss_dssp             EETTSSCSCCC-CCCSEEESSTTHH
T ss_pred             EEcCCCCCccc-cCCCEEECCHHHH
Confidence            99876433322 5567888888775

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.45  E-value=1e-13  Score=118.60  Aligned_cols=103  Identities=21%  Similarity=0.252  Sum_probs=87.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+. +|+.+++++++...||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++
T Consensus       129 ~~i~t~~~~~~~~~~l-~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v  206 (240)
T 2hi0_A          129 LAVVSNKPNEAVQVLV-EELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEI  206 (240)
T ss_dssp             EEEEEEEEHHHHHHHH-HHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred             EEEEeCCCHHHHHHHH-HHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence            4799999998887766 788998 99999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      ++.++......  ...++.++.++.++
T Consensus       207 ~v~~~~~~~~~~~~~~a~~~~~~~~el  233 (240)
T 2hi0_A          207 AVNWGFRSVPFLQKHGATVIVDTAEKL  233 (240)
T ss_dssp             EESSSSSCHHHHHHTTCCCEECSHHHH
T ss_pred             EECCCCCchhHHHhcCCCEEECCHHHH
Confidence            99876432221  12456777777653

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.45  E-value=1.9e-13  Score=117.20  Aligned_cols=109  Identities=46%  Similarity=0.586  Sum_probs=93.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC--CCCCCCCCHHHHHHHHHHhCCCC--CcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~--~~~~~KP~pe~f~~~l~~l~v~p--~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++|+||..+..+...+.+.+|+..+|+.+++++  ++...||+|+.|..++++++++|  ++|++|||+..|+++|+++|
T Consensus       131 ~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG  210 (250)
T 3l5k_A          131 FALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAG  210 (250)
T ss_dssp             EEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTT
T ss_pred             EEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcC
Confidence            479999998877766634458889999999999  89999999999999999999988  99999999999999999999


Q ss_pred             CEEEEecCCCCcccccccccEEEeccccccccc
Q 023972           77 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK  109 (274)
Q Consensus        77 i~vi~V~~~~~~~~~iSss~~ii~~l~e~~~~~  109 (274)
                      +.++++..+.........++.++.++.++....
T Consensus       211 ~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l  243 (250)
T 3l5k_A          211 MQVVMVPDGNLSRDLTTKATLVLNSLQDFQPEL  243 (250)
T ss_dssp             CEEEECCCTTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred             CEEEEEcCCCCchhhcccccEeecCHHHhhHHH
Confidence            999999987654444566789999998874443

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.45  E-value=3.4e-13  Score=115.03  Aligned_cols=104  Identities=24%  Similarity=0.337  Sum_probs=89.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||+....+...+ +++|+..+|+.++++++++..||+|+.|..+++++|++|++|++|||+. +|+.+|+++|+.+
T Consensus       113 ~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~  191 (241)
T 2hoq_A          113 LGIITDGNPVKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKT  191 (241)
T ss_dssp             EEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEE
T ss_pred             EEEEECCCchhHHHHH-HHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEE
Confidence            4799999998887666 8889999999999999999999999999999999999999999999998 8999999999999


Q ss_pred             EEecCCCCcccccc---cccEEEeccccc
Q 023972           80 VAVPSLPKQTHRYT---AADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~~iS---ss~~ii~~l~e~  105 (274)
                      +++.++........   .++.+++++.++
T Consensus       192 ~~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (241)
T 2hoq_A          192 VWFRYGKHSERELEYRKYADYEIDNLESL  220 (241)
T ss_dssp             EEECCSCCCHHHHTTGGGCSEEESSTTHH
T ss_pred             EEECCCCCCcccccccCCCCEEECCHHHH
Confidence            99976543322222   566888888775

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.45  E-value=7.7e-13  Score=112.63  Aligned_cols=104  Identities=18%  Similarity=0.309  Sum_probs=90.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+..+|+.++++++++..||+|+.|..++++++++|++|++|||+..|+.+|+++|+.++
T Consensus       124 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~  202 (240)
T 2no4_A          124 VAILSNGNDEMLQAAL-KASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTV  202 (240)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred             EEEEcCCCHHHHHHHH-HhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEE
Confidence            4789999999888766 788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccc-cEEEeccccc
Q 023972           81 AVPSLPKQTHRYTAA-DEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss-~~ii~~l~e~  105 (274)
                      ++.++.........+ +.+++++.++
T Consensus       203 ~v~~~~~~~~~~~~~~~~~~~~~~el  228 (240)
T 2no4_A          203 RINRQGNPPEYEFAPLKHQVNSLSEL  228 (240)
T ss_dssp             EECTTCCCCCCTTSCCSEEESSGGGH
T ss_pred             EECCCCCCCcccCCCCceeeCCHHHH
Confidence            998764322222345 6888888775

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.44  E-value=2.7e-13  Score=112.93  Aligned_cols=104  Identities=20%  Similarity=0.284  Sum_probs=89.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.++..+...+ +++|+..+|+.++++++.+..||+|+.|..++++++++|+++++|||+..|+.+|+++|+.++
T Consensus       101 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~  179 (209)
T 2hdo_A          101 LGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFG  179 (209)
T ss_dssp             EEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             EEEEeCCCHHHHHHHH-HHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEE
Confidence            4799999998888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      .++++.........++.++.++.++
T Consensus       180 ~~~~~~~~~~~~~~a~~~~~~~~el  204 (209)
T 2hdo_A          180 LAVWGMDPNADHQKVAHRFQKPLDI  204 (209)
T ss_dssp             EEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred             EEcCCCCChhhhccCCEEeCCHHHH
Confidence            9986543222222367888888764

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.44  E-value=7e-13  Score=111.80  Aligned_cols=103  Identities=26%  Similarity=0.277  Sum_probs=91.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||.+...+...+ +.+|+..+|+.++++++.+..||+|+.|..+++++|++|+++++|||+. .|+.+|+++|+.+
T Consensus       125 ~~i~sn~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~  203 (240)
T 3qnm_A          125 LYILSNGFRELQSRKM-RSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQ  203 (240)
T ss_dssp             EEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEE
T ss_pred             EEEEeCCchHHHHHHH-HHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeE
Confidence            4799999999888766 7889999999999999999999999999999999999999999999996 9999999999999


Q ss_pred             EEecCCCCcccccccccEEEeccccc
Q 023972           80 VAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      +.++.... ......++.+++++.++
T Consensus       204 ~~~~~~~~-~~~~~~~d~vi~sl~e~  228 (240)
T 3qnm_A          204 AFYNVTER-TVFPFQPTYHIHSLKEL  228 (240)
T ss_dssp             EEECCSCC-CCCSSCCSEEESSTHHH
T ss_pred             EEEcCCCC-CCcCCCCceEECCHHHH
Confidence            99998654 22345678999999875

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.43  E-value=8e-13  Score=111.42  Aligned_cols=104  Identities=16%  Similarity=0.234  Sum_probs=91.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +.+|+.++|+.++++++....||+|+.|..++++++++|++|++|||+..|+.+|+++|+.++
T Consensus       118 ~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~  196 (233)
T 3umb_A          118 LGILSNGNPQMLEIAV-KSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTF  196 (233)
T ss_dssp             EEEEESSCHHHHHHHH-HTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred             EEEEeCCCHHHHHHHH-HHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEE
Confidence            4799999999888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc-cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR-YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~-iSss~~ii~~l~e~  105 (274)
                      ++.++...... ...++.+++++.++
T Consensus       197 ~v~~~~~~~~~~~~~~~~v~~~~~el  222 (233)
T 3umb_A          197 WINRLGHPPEALDVAPAAAGHDMRDL  222 (233)
T ss_dssp             EECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             EEcCCCCCchhccCCCCEEECCHHHH
Confidence            99876433322 23467888888775

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.42  E-value=9.7e-13  Score=109.14  Aligned_cols=102  Identities=19%  Similarity=0.309  Sum_probs=87.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.++..+...+ +++|+..+|+.+++++++...||+|+.|..++++++  |++|++|||+..|+.+|+++|+.++
T Consensus        91 ~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~  167 (201)
T 2w43_A           91 VYALSNGSINEVKQHL-ERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSI  167 (201)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEE
T ss_pred             EEEEeCcCHHHHHHHH-HHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEE
Confidence            4799999998888766 889999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             EecCCCCccc-ccccccEEEeccccc
Q 023972           81 AVPSLPKQTH-RYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~-~iSss~~ii~~l~e~  105 (274)
                      ++.++..... ....++.++.++.++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~el  193 (201)
T 2w43_A          168 FVNRKNTIVDPIGGKPDVIVNDFKEL  193 (201)
T ss_dssp             EECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred             EECCCCCCccccCCCCCEEECCHHHH
Confidence            9987533222 123466788877664

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.41  E-value=1.2e-12  Score=110.68  Aligned_cols=104  Identities=17%  Similarity=0.269  Sum_probs=90.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+..+|+.++++++....||+|+.|..++++++++|++|++|||+..|+.+|+++|+.++
T Consensus       114 ~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~  192 (232)
T 1zrn_A          114 LAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTC  192 (232)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred             EEEEeCCCHHHHHHHH-HhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEE
Confidence            4789999999888766 788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc-cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR-YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~-iSss~~ii~~l~e~  105 (274)
                      ++.++...... ...++.++.++.++
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~el  218 (232)
T 1zrn_A          193 WINRTGNVFEEMGQTPDWEVTSLRAV  218 (232)
T ss_dssp             EECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             EEcCCCCCccccCCCCCEEECCHHHH
Confidence            99875432222 24467888888775

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.41  E-value=1.2e-12  Score=109.99  Aligned_cols=104  Identities=23%  Similarity=0.256  Sum_probs=91.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +.+|+..+|+.++++++....||+|+.|..++++++++|+++++|||+.+|+.+|+++|+.++
T Consensus       115 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~  193 (230)
T 3um9_A          115 TAILSNGSRHSIRQVV-GNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVC  193 (230)
T ss_dssp             EEEEESSCHHHHHHHH-HHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred             EEEEeCCCHHHHHHHH-HHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEE
Confidence            4799999999888766 788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc-cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR-YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~-iSss~~ii~~l~e~  105 (274)
                      .+.++...... ...++.+++++.++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~el  219 (230)
T 3um9_A          194 WINRSNGVFDQLGVVPDIVVSDVGVL  219 (230)
T ss_dssp             EECTTSCCCCCSSCCCSEEESSHHHH
T ss_pred             EEeCCCCccccccCCCcEEeCCHHHH
Confidence            99886433222 24567889988875

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.41  E-value=3.8e-13  Score=112.91  Aligned_cols=104  Identities=17%  Similarity=0.199  Sum_probs=91.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+....+...+ +.+|+..+|+.++++++....||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++
T Consensus       105 ~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i  183 (226)
T 3mc1_A          105 LVVATSKPTVFSKQIL-EHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSI  183 (226)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEE
T ss_pred             EEEEeCCCHHHHHHHH-HHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEE
Confidence            4789999999888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCccccc--ccccEEEeccccc
Q 023972           81 AVPSLPKQTHRY--TAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~i--Sss~~ii~~l~e~  105 (274)
                      ++..+.......  ..++.+++++.++
T Consensus       184 ~v~~g~~~~~~~~~~~ad~v~~s~~el  210 (226)
T 3mc1_A          184 GVTYGFGSYEELKNAGANYIVNSVDEL  210 (226)
T ss_dssp             EESSSSSCHHHHHHHTCSEEESSHHHH
T ss_pred             EEccCCCCHHHHHHcCCCEEECCHHHH
Confidence            999765433332  5677899888875

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.41  E-value=6.5e-13  Score=111.89  Aligned_cols=104  Identities=18%  Similarity=0.267  Sum_probs=92.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||.....+...+ +.+|+..+|+.++++++....||+|+.|..+++++|++|+++++|||+. +|+.+|+++|+.+
T Consensus       118 ~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~  196 (234)
T 3u26_A          118 VGMITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTS  196 (234)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEE
T ss_pred             EEEEECCCHHHHHHHH-HHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEE
Confidence            4799999999888766 8889999999999999999999999999999999999999999999998 9999999999999


Q ss_pred             EEecCCCCcccccccccEEEeccccc
Q 023972           80 VAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      +++..+.........++.++.++.++
T Consensus       197 ~~v~~~~~~~~~~~~a~~~~~~~~el  222 (234)
T 3u26_A          197 ILLDRKGEKREFWDKCDFIVSDLREV  222 (234)
T ss_dssp             EEECSSSTTGGGGGGCSEEESSTHHH
T ss_pred             EEECCCCCccccccCCCEeeCCHHHH
Confidence            99988754443344677899988775

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.41  E-value=5.4e-13  Score=112.96  Aligned_cols=104  Identities=31%  Similarity=0.470  Sum_probs=91.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.....+...+ +++|+..+|+.+++++++...||+|+.|..++++++++|++|++|||+.+|+.+|+.+|+.++
T Consensus       123 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i  201 (237)
T 4ex6_A          123 LAMATSKVEKAARAIA-ELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVI  201 (237)
T ss_dssp             EEEECSSCHHHHHHHH-HHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred             EEEEcCCChHHHHHHH-HHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence            4799999999888766 788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      +|..+......  ...++.++.++.++
T Consensus       202 ~v~~g~~~~~~~~~~~ad~v~~~~~el  228 (237)
T 4ex6_A          202 GVSYGVSGPDELMRAGADTVVDSFPAA  228 (237)
T ss_dssp             EESSSSSCHHHHHHTTCSEEESSHHHH
T ss_pred             EEecCCCCHHHHHhcCCCEEECCHHHH
Confidence            99886433222  23567888888774

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.38  E-value=1.8e-12  Score=111.57  Aligned_cols=83  Identities=24%  Similarity=0.386  Sum_probs=78.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+..+|+.+++++++...||+|+.|..++++++++|++|++|||+..|+.+|+++|+.++
T Consensus       110 ~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~  188 (253)
T 1qq5_A          110 RAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA  188 (253)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred             EEEEeCcCHHHHHHHH-HHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEE
Confidence            4799999999888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecC
Q 023972           81 AVPS   84 (274)
Q Consensus        81 ~V~~   84 (274)
                      +++.
T Consensus       189 ~~~~  192 (253)
T 1qq5_A          189 RVAR  192 (253)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            9987

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.38  E-value=8.1e-13  Score=108.10  Aligned_cols=102  Identities=20%  Similarity=0.267  Sum_probs=82.7

Q ss_pred             CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEEe-----cCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972            1 MALASNSHR---------------ATIESKISYQHGWNESFSVIVG-----SDEVRTGKPSPDIFLEAAKRLNMEPSSSL   60 (274)
Q Consensus         1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~~-----~~~~~~~KP~pe~f~~~l~~l~v~p~~~v   60 (274)
                      ++|+||.+.               ..+...+ +++|  .+|+.++.     ++++...||+|+.|..++++++++|++++
T Consensus        46 ~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g--~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  122 (179)
T 3l8h_A           46 VVLATNQSGLARGLFDTATLNAIHDKMHRAL-AQMG--GVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVP  122 (179)
T ss_dssp             EEEEEECTTTTTTSSCHHHHHHHHHHHHHHH-HHTT--CCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCE
T ss_pred             EEEEECCCccccCcCCHHHHHHHHHHHHHHH-HhCC--CceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence            479999986               4555555 6667  56777663     57788999999999999999999999999


Q ss_pred             EEecCHhhHHHHHHcCCEEEEecCCCCcccc----cccccEEEeccccc
Q 023972           61 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDL  105 (274)
Q Consensus        61 vvgD~~~di~aA~~aGi~vi~V~~~~~~~~~----iSss~~ii~~l~e~  105 (274)
                      +|||+..|+++|+++|+.++++.++......    ...++.+++++.++
T Consensus       123 ~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el  171 (179)
T 3l8h_A          123 AVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV  171 (179)
T ss_dssp             EEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHH
T ss_pred             EECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHH
Confidence            9999999999999999999999987543322    24567899988774

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.37  E-value=1.8e-12  Score=108.96  Aligned_cols=104  Identities=20%  Similarity=0.219  Sum_probs=88.5

Q ss_pred             CEEEcCCC---hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcC
Q 023972            1 MALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~---~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aG   76 (274)
                      ++|+||..   ...+...+ +.+|+..+|+.+++++++...||+|+.|..+++++|++|++|++|||+. +|+.+|+.+|
T Consensus       118 ~~i~t~~~~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG  196 (235)
T 2om6_A          118 TAVIGNVMFWPGSYTRLLL-ERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVG  196 (235)
T ss_dssp             EEEEECCCSSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTT
T ss_pred             EEEEcCCcccchhHHHHHH-HhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCC
Confidence            47899999   88777666 7889999999999999999999999999999999999999999999999 8999999999


Q ss_pred             CEEEEecCCCCcccccccccEEEeccccc
Q 023972           77 MEVVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        77 i~vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      +.++.++++.........++.+++++.++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el  225 (235)
T 2om6_A          197 MWAVWINQEGDKVRKLEERGFEIPSIANL  225 (235)
T ss_dssp             SEEEEECTTCCSCEEEETTEEEESSGGGH
T ss_pred             CEEEEECCCCCCcccCCCCcchHhhHHHH
Confidence            99999987632222223356778887764

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.37  E-value=4.7e-13  Score=104.01  Aligned_cols=84  Identities=20%  Similarity=0.250  Sum_probs=77.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +.+|+..+|+.++++++....||+|+.|..++++++++|+++++|||+..|+.+|+++|+.++
T Consensus        37 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i  115 (137)
T 2pr7_A           37 TVILSNDPGGLGAAPI-RELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV  115 (137)
T ss_dssp             EEEEECSCCGGGGHHH-HHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred             EEEEeCCCHHHHHHHH-HHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence            4799999998887666 778999999999999998999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      ++.++
T Consensus       116 ~~~~~  120 (137)
T 2pr7_A          116 YYQQF  120 (137)
T ss_dssp             ECSCH
T ss_pred             EeCCh
Confidence            98763

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.37  E-value=3.6e-12  Score=109.36  Aligned_cols=104  Identities=20%  Similarity=0.326  Sum_probs=90.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.....+...+ +++|+..+|+.+++++++...||+|+.|..++++++++|++|++|||+..|+.+|+++|+.++
T Consensus       133 ~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i  211 (243)
T 2hsz_A          133 LAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVV  211 (243)
T ss_dssp             EEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             EEEEECCcHHHHHHHH-HHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEE
Confidence            4799999999887766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcc--cccccccEEEeccccc
Q 023972           81 AVPSLPKQT--HRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~--~~iSss~~ii~~l~e~  105 (274)
                      ++.++....  .....++.++.++.++
T Consensus       212 ~v~~g~~~~~~~~~~~ad~vi~~~~el  238 (243)
T 2hsz_A          212 GLTYGYNYNIPIAQSKPDWIFDDFADI  238 (243)
T ss_dssp             EESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             EEcCCCCchhhhhhCCCCEEECCHHHH
Confidence            998764322  1234567888888764

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.37  E-value=1.4e-12  Score=110.86  Aligned_cols=104  Identities=12%  Similarity=0.169  Sum_probs=91.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||.....+...+ +.+|+..+|+.++++++....||+|+.|..++++++++ |+++++|||+..|+.+|+++|+.+
T Consensus       129 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~  207 (240)
T 3sd7_A          129 LLVATSKPTVFAETIL-RYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDS  207 (240)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred             EEEEeCCcHHHHHHHH-HHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCE
Confidence            4799999999888766 88899999999999999999999999999999999999 999999999999999999999999


Q ss_pred             EEecCCCCccccc--ccccEEEeccccc
Q 023972           80 VAVPSLPKQTHRY--TAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~~i--Sss~~ii~~l~e~  105 (274)
                      +++..+.......  ..++.++.++.++
T Consensus       208 i~v~~g~~~~~~~~~~~ad~v~~~~~el  235 (240)
T 3sd7_A          208 IGVLYGYGSFEEISESEPTYIVENVESI  235 (240)
T ss_dssp             EEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred             EEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence            9998764433322  5567888888764

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.37  E-value=1e-12  Score=110.49  Aligned_cols=104  Identities=27%  Similarity=0.304  Sum_probs=91.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.....+...+ +.+|+..+|+.++++++....||+|+.|..++++++++|+++++|||+..|+.+|+++|+.++
T Consensus       110 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i  188 (233)
T 3s6j_A          110 WCIATSGGIDTATINL-KALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGV  188 (233)
T ss_dssp             EEEECSSCHHHHHHHH-HTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred             EEEEeCCchhhHHHHH-HhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEE
Confidence            4799999999888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      +|..+......  ...++.++.++.++
T Consensus       189 ~v~~g~~~~~~l~~~~ad~v~~~~~el  215 (233)
T 3s6j_A          189 GLLSGGYDIGELERAGALRVYEDPLDL  215 (233)
T ss_dssp             EEGGGSCCHHHHHHTTCSEEESSHHHH
T ss_pred             EEeCCCCchHhHHhcCCCEEECCHHHH
Confidence            99875333222  23367899988875

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.36  E-value=2e-12  Score=112.92  Aligned_cols=102  Identities=9%  Similarity=0.037  Sum_probs=78.6

Q ss_pred             CEEEcCCChHHHHHHHHHHc-----------CCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH
Q 023972            1 MALASNSHRATIESKISYQH-----------GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV   69 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~-----------gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di   69 (274)
                      ++|+||+++..+...+ +++           ++.++|+.++.+ .+...||+|+.|..+++++|++|++|+||||+..|+
T Consensus       140 l~i~Tn~~~~~~~~~l-~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di  217 (253)
T 2g80_A          140 VFIYSSGSVKAQKLLF-GYVQDPNAPAHDSLDLNSYIDGYFDI-NTSGKKTETQSYANILRDIGAKASEVLFLSDNPLEL  217 (253)
T ss_dssp             EEEECSSCHHHHHHHH-HSBCCTTCTTSCCBCCGGGCCEEECH-HHHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHH
T ss_pred             EEEEeCCCHHHHHHHH-HhhcccccccccccchHhhcceEEee-eccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHH
Confidence            5899999999888766 655           477778877755 331259999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEecCCCCcccccccccEEEecccc
Q 023972           70 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  104 (274)
Q Consensus        70 ~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e  104 (274)
                      ++|+++|+.++++.+..........++.+++++.+
T Consensus       218 ~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  252 (253)
T 2g80_A          218 DAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFET  252 (253)
T ss_dssp             HHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTT
T ss_pred             HHHHHcCCEEEEEcCCCCCCcccccCCCccCChhh
Confidence            99999999999997632221111114466776654

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.34  E-value=2e-12  Score=108.77  Aligned_cols=99  Identities=22%  Similarity=0.379  Sum_probs=86.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||.+..     + +.+|+..+|+.++++++.+..||+|+.|..+++++|++|+++++|||+. .|+.+|+++|+.+
T Consensus       123 ~~i~t~~~~~-----l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~  196 (230)
T 3vay_A          123 LGVITNGNAD-----V-RRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRA  196 (230)
T ss_dssp             EEEEESSCCC-----G-GGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEE
T ss_pred             EEEEECCchh-----h-hhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEE
Confidence            4789998876     4 7789999999999999999999999999999999999999999999998 8999999999999


Q ss_pred             EEecCCCCcccccccccEEEeccccc
Q 023972           80 VAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      +++.++.........++.+++++.++
T Consensus       197 ~~v~~~~~~~~~~~~~~~~~~~l~el  222 (230)
T 3vay_A          197 IWYNPQGKAWDADRLPDAEIHNLSQL  222 (230)
T ss_dssp             EEECTTCCCCCSSSCCSEEESSGGGH
T ss_pred             EEEcCCCCCCcccCCCCeeECCHHHH
Confidence            99988654333244567899998875

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.34  E-value=1.3e-12  Score=113.38  Aligned_cols=103  Identities=26%  Similarity=0.348  Sum_probs=88.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||.... +...+ +.+|+..+|+.+++++++...||+|+.|..++++++++|++|++|||+. .|+.+|+++|+.+
T Consensus       125 ~~i~tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~  202 (263)
T 3k1z_A          125 LAVISNFDRR-LEGIL-GGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHS  202 (263)
T ss_dssp             EEEEESCCTT-HHHHH-HHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEE
T ss_pred             EEEEeCCcHH-HHHHH-HhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEE
Confidence            4799998875 55555 8899999999999999999999999999999999999999999999997 9999999999999


Q ss_pred             EEecCCCCccc---ccccccEEEeccccc
Q 023972           80 VAVPSLPKQTH---RYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~---~iSss~~ii~~l~e~  105 (274)
                      +++.++.....   ....++.++.++.++
T Consensus       203 i~~~~~~~~~~~~~~~~~ad~v~~~l~el  231 (263)
T 3k1z_A          203 FLVVGPQALDPVVRDSVPKEHILPSLAHL  231 (263)
T ss_dssp             EEECCSSCCCHHHHHHSCGGGEESSGGGH
T ss_pred             EEEcCCCCCchhhcccCCCceEeCCHHHH
Confidence            99988643222   123467888888875

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.34  E-value=1.5e-12  Score=111.07  Aligned_cols=103  Identities=26%  Similarity=0.427  Sum_probs=89.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC--cEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F--d~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.....+...+ +. ++..+|  |.+++++++...||+|+.|..++++++++|++|++|||+.+|+.+|+++|+.
T Consensus       128 ~~i~t~~~~~~~~~~l-~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~  205 (243)
T 3qxg_A          128 PMVVTGSGQLSLLERL-EH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIF  205 (243)
T ss_dssp             EEEECCCCCHHHHTTH-HH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCE
T ss_pred             EEEEeCCcHHHHHHHH-HH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCE
Confidence            4799999988887777 66 999999  9999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCcccc--cccccEEEeccccc
Q 023972           79 VVAVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      ++++.++......  ...++.++.++.++
T Consensus       206 ~i~v~~~~~~~~~l~~~~ad~v~~s~~el  234 (243)
T 3qxg_A          206 TIAVNTGPLDGQVLLDAGADLLFPSMQTL  234 (243)
T ss_dssp             EEEECCSSSCHHHHHHTTCSEEESCHHHH
T ss_pred             EEEEeCCCCCHHHHHhcCCCEEECCHHHH
Confidence            9999886543322  23567888888775

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.34  E-value=6.7e-13  Score=122.56  Aligned_cols=105  Identities=22%  Similarity=0.293  Sum_probs=89.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCc--EEEecCCCC-----------CCCCCHHHHHHHHHHhC--------------
Q 023972            1 MALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR-----------TGKPSPDIFLEAAKRLN--------------   53 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd--~v~~~~~~~-----------~~KP~pe~f~~~l~~l~--------------   53 (274)
                      ++|+||+++..+...+ +++|+.++||  .+++++++.           .+||+|+.|..++++++              
T Consensus       234 laIvTn~~~~~~~~~L-~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a~~~lg~~~~~~~~~~~~~~  312 (384)
T 1qyi_A          234 LGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNI  312 (384)
T ss_dssp             EEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTC
T ss_pred             EEEEeCCcHHHHHHHH-HHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCccccccccccccC
Confidence            5899999999998777 7889999999  899988754           48999999999999998              


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCc---ccc--cccccEEEecccccc
Q 023972           54 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ---THR--YTAADEVINSLLDLR  106 (274)
Q Consensus        54 v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~---~~~--iSss~~ii~~l~e~~  106 (274)
                      ++|++|+||||+..|+++|+++|+.++++.++...   ...  ...++.+++++.++.
T Consensus       313 v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~  370 (384)
T 1qyi_A          313 VNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR  370 (384)
T ss_dssp             SCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHH
T ss_pred             CCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHH
Confidence            89999999999999999999999999999886431   111  235678999998753

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.34  E-value=1.4e-12  Score=110.12  Aligned_cols=100  Identities=35%  Similarity=0.456  Sum_probs=74.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++.  +...+ +++|+..+|+.+++++++...||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++
T Consensus       111 ~~i~t~~~~--~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~  187 (233)
T 3nas_A          111 IGLASSSRN--APKIL-RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAV  187 (233)
T ss_dssp             EEECCSCTT--HHHHH-HHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEE
T ss_pred             EEEEcCchh--HHHHH-HHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEE
Confidence            478999866  44445 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDLRP  107 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~~~  107 (274)
                      +++...    ....++.++.++.++.+
T Consensus       188 ~~~~~~----~~~~ad~v~~s~~el~~  210 (233)
T 3nas_A          188 GVGQGQ----PMLGADLVVRQTSDLTL  210 (233)
T ss_dssp             ECC-----------CSEECSSGGGCCH
T ss_pred             EECCcc----ccccCCEEeCChHhCCH
Confidence            997631    12256788888887654

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.34  E-value=1.4e-12  Score=110.75  Aligned_cols=103  Identities=28%  Similarity=0.481  Sum_probs=87.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC--cEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F--d~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.....+...+ +. |+.++|  |.+++++++...||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.
T Consensus       127 ~~i~t~~~~~~~~~~l-~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~  204 (247)
T 3dv9_A          127 PMVVTGSGQTSLLDRL-NH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIF  204 (247)
T ss_dssp             EEEECSCC---CHHHH-HH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSE
T ss_pred             EEEEcCCchHHHHHHH-Hh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCe
Confidence            4799999988888777 66 999999  9999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCcccc--cccccEEEeccccc
Q 023972           79 VVAVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      ++++.++......  ...++.++.++.++
T Consensus       205 ~i~v~~~~~~~~~l~~~~ad~v~~~~~el  233 (247)
T 3dv9_A          205 TIAVNTGPLHDNVLLNEGANLLFHSMPDF  233 (247)
T ss_dssp             EEEECCSSSCHHHHHTTTCSEEESSHHHH
T ss_pred             EEEEcCCCCCHHHHHhcCCCEEECCHHHH
Confidence            9999886543322  23567888888764

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.34  E-value=2.3e-12  Score=108.08  Aligned_cols=80  Identities=18%  Similarity=0.191  Sum_probs=71.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||+.+..+.. +   ++  .+||.+++++++...||+|+.|..+++++++.| ++|+||||+..|+++|+++|+.+
T Consensus        55 ~~i~T~~~~~~~~~-~---~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~  128 (196)
T 2oda_A           55 CAWIDELPEALSTP-L---AA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWT  128 (196)
T ss_dssp             EEEECCSCHHHHHH-H---HT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEE
T ss_pred             EEEEcCChHHHHHH-h---cC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEE
Confidence            58999999887632 3   23  578999999999999999999999999999975 89999999999999999999999


Q ss_pred             EEecCCC
Q 023972           80 VAVPSLP   86 (274)
Q Consensus        80 i~V~~~~   86 (274)
                      +++.++.
T Consensus       129 i~v~~g~  135 (196)
T 2oda_A          129 IGLASCG  135 (196)
T ss_dssp             EEESSSS
T ss_pred             EEEccCC
Confidence            9998864

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.33  E-value=4e-12  Score=107.25  Aligned_cols=99  Identities=28%  Similarity=0.386  Sum_probs=84.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCC-cEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS-SSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~-~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||.....+...+ +.+|+..+|+.+++++++...||+|+.|..++++++++|+ ++++|||+.+|+++|+++|+.+
T Consensus       122 ~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~  200 (231)
T 3kzx_A          122 MAIVSNKNGERLRSEI-HHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLP  200 (231)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEE
T ss_pred             EEEEECCCHHHHHHHH-HHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeE
Confidence            4789999999888767 8899999999999999999999999999999999999999 9999999999999999999999


Q ss_pred             EEecCCCCcccccccccEEEeccccc
Q 023972           80 VAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      +++.....     ..++.++.++.++
T Consensus       201 v~~~~~~~-----~~~~~~~~~~~el  221 (231)
T 3kzx_A          201 IKYGSTNI-----IKDILSFKNFYDI  221 (231)
T ss_dssp             EEECC----------CCEEESSHHHH
T ss_pred             EEECCCCC-----CCCceeeCCHHHH
Confidence            99965432     2234677777654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.33  E-value=1.9e-12  Score=111.77  Aligned_cols=85  Identities=20%  Similarity=0.260  Sum_probs=79.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCC-CcEEEecCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~-Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.+...+...+ +.+|+..+ |+.++++++....||+|+.|..+++++|++| ++|++|||+.+|+.+|+++|+.
T Consensus       130 ~~i~tn~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~  208 (277)
T 3iru_A          130 VGGNTGYGPGMMAPAL-IAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMW  208 (277)
T ss_dssp             EEEECSSCHHHHHHHH-HHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred             EEEEeCCchHHHHHHH-HhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCe
Confidence            4799999998888766 77888888 9999999999999999999999999999999 9999999999999999999999


Q ss_pred             EEEecCCC
Q 023972           79 VVAVPSLP   86 (274)
Q Consensus        79 vi~V~~~~   86 (274)
                      +++|.++.
T Consensus       209 ~v~v~~g~  216 (277)
T 3iru_A          209 TVGVSCSG  216 (277)
T ss_dssp             EEEECSSS
T ss_pred             EEEEecCC
Confidence            99999874

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.31  E-value=3.5e-12  Score=105.41  Aligned_cols=84  Identities=23%  Similarity=0.326  Sum_probs=78.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+..+|+.+++++++...||+|+.|..++++++++|++|++|||+..|+.+|+++|+.++
T Consensus       104 ~~i~s~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~  182 (200)
T 3cnh_A          104 MYSLNNEGRDLNEYRI-RTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAV  182 (200)
T ss_dssp             EEEEECCCHHHHHHHH-HHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred             EEEEeCCcHHHHHHHH-HhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEE
Confidence            4799999999888766 788999999999999998999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      .+.++
T Consensus       183 ~~~~~  187 (200)
T 3cnh_A          183 QCVDA  187 (200)
T ss_dssp             ECSCH
T ss_pred             EECCc
Confidence            99764

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.31  E-value=2.3e-12  Score=110.97  Aligned_cols=104  Identities=34%  Similarity=0.420  Sum_probs=90.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcE-EEecCCCC-CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSV-IVGSDEVR-TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~-v~~~~~~~-~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.....+...+ +++|+..+|+. +++++++. ..||+|+.|..++++++++|++|++|||+..|+.+|+++|+.
T Consensus       129 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~  207 (259)
T 4eek_A          129 FAIGSNSERGRLHLKL-RVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGAT  207 (259)
T ss_dssp             EEEECSSCHHHHHHHH-HHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred             EEEEeCCCHHHHHHHH-HhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCE
Confidence            4799999999888766 88899999999 99999999 999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCc----c--cccccccEEEeccccc
Q 023972           79 VVAVPSLPKQ----T--HRYTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~----~--~~iSss~~ii~~l~e~  105 (274)
                      ++++.++...    .  .....++.++.++.++
T Consensus       208 ~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el  240 (259)
T 4eek_A          208 LWGLLVPGHPHPDGAAALSRLGAARVLTSHAEL  240 (259)
T ss_dssp             EEEECCTTSCCSSCHHHHHHHTCSEEECSHHHH
T ss_pred             EEEEccCCCcccccHHHHHhcCcchhhCCHHHH
Confidence            9999876332    1  1124467899999875

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.30  E-value=7.8e-12  Score=103.92  Aligned_cols=101  Identities=22%  Similarity=0.308  Sum_probs=87.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC--cEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F--d~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.....+...+ +.+|+..+|  +.+++++. ...||+|+.|..++++++++|++|++|||+.+|+.+|+++|+.
T Consensus        89 ~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~  166 (205)
T 3m9l_A           89 LGILTRNARELAHVTL-EAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTR  166 (205)
T ss_dssp             EEEECSSCHHHHHHHH-HHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred             EEEEeCCchHHHHHHH-HHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCE
Confidence            4799999999888766 888999999  88888776 8999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCcccccccccEEEeccccc
Q 023972           79 VVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++++..+....  ...++.++.++.++
T Consensus       167 ~i~v~~~~~~~--~~~ad~v~~~~~el  191 (205)
T 3m9l_A          167 TVLVNLPDNPW--PELTDWHARDCAQL  191 (205)
T ss_dssp             EEECSSSSCSC--GGGCSEECSSHHHH
T ss_pred             EEEEeCCCCcc--cccCCEEeCCHHHH
Confidence            99998764322  23456888888765

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.30  E-value=6.4e-12  Score=105.66  Aligned_cols=102  Identities=19%  Similarity=0.235  Sum_probs=85.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHH---HHHhCCCCCcEEEEecCH-hhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA---AKRLNMEPSSSLVIEDSV-IGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~---l~~l~v~p~~~vvvgD~~-~di~aA~~aG   76 (274)
                      ++|+||.+...+...+ +.  +..+||.+++++++...||+|+.|..+   +++++++|++|++|||+. +|+.+|+++|
T Consensus       117 ~~i~tn~~~~~~~~~l-~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG  193 (240)
T 3smv_A          117 LVILSNIDRNEFKLSN-AK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAG  193 (240)
T ss_dssp             EEEEESSCHHHHHHHH-TT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHT
T ss_pred             EEEEeCCChhHHHHHH-Hh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcC
Confidence            4799999998887655 44  778999999999999999999999998   889999999999999996 9999999999


Q ss_pred             CEEEEecCCCC--------cccccccccEEEeccccc
Q 023972           77 MEVVAVPSLPK--------QTHRYTAADEVINSLLDL  105 (274)
Q Consensus        77 i~vi~V~~~~~--------~~~~iSss~~ii~~l~e~  105 (274)
                      +.++.++....        .......++.+++++.++
T Consensus       194 ~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el  230 (240)
T 3smv_A          194 LVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM  230 (240)
T ss_dssp             CEEEEECTTCC-------CCCSSCCCCSEEESSHHHH
T ss_pred             CeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHH
Confidence            99999986411        112235667888888764

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.29  E-value=3e-11  Score=105.49  Aligned_cols=105  Identities=19%  Similarity=0.205  Sum_probs=86.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCC----CCCCCCHHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHc
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAA   75 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~----~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~a   75 (274)
                      ++|+||+.+..+...+ +.+|+.++||.++++++.    ..+||+|+.|..+++++|++| ++|++|||+.+|+.+|+++
T Consensus       163 l~i~Tn~~~~~~~~~l-~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~a  241 (282)
T 3nuq_A          163 LWLFTNAYKNHAIRCL-RLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKL  241 (282)
T ss_dssp             EEEECSSCHHHHHHHH-HHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHH
T ss_pred             EEEEECCChHHHHHHH-HhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHC
Confidence            4799999999888766 788999999999988764    567999999999999999999 9999999999999999999


Q ss_pred             CC-EEEEecCCCCcc--cccccccEEEecccccc
Q 023972           76 GM-EVVAVPSLPKQT--HRYTAADEVINSLLDLR  106 (274)
Q Consensus        76 Gi-~vi~V~~~~~~~--~~iSss~~ii~~l~e~~  106 (274)
                      |+ .++.+.......  .....++.+++++.++.
T Consensus       242 G~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~  275 (282)
T 3nuq_A          242 GMKTCIHLVENEVNEILGQTPEGAIVISDILELP  275 (282)
T ss_dssp             TCSEEEEECSCCC----CCCCTTCEEESSGGGGG
T ss_pred             CCeEEEEEcCCccccccccCCCCCEEeCCHHHHH
Confidence            99 677776643322  11335668999998753

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.28  E-value=8e-12  Score=106.63  Aligned_cols=102  Identities=23%  Similarity=0.357  Sum_probs=86.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.....+...+ +.+|+.  |+.+++++++...||+|+.|..+++++|++|++|++|||+.+|+.+|+.+|+.++
T Consensus       138 ~~i~s~~~~~~~~~~l-~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~  214 (254)
T 3umc_A          138 LAALSNGNTALMLDVA-RHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTA  214 (254)
T ss_dssp             EEECCSSCHHHHHHHH-HHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred             EEEEeCCCHHHHHHHH-HHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEE
Confidence            4789999998888666 778885  9999999999999999999999999999999999999999999999999999999


Q ss_pred             Eec----CCCCcccc---cccccEEEeccccc
Q 023972           81 AVP----SLPKQTHR---YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~----~~~~~~~~---iSss~~ii~~l~e~  105 (274)
                      .++    ++......   ...++.+++++.++
T Consensus       215 ~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el  246 (254)
T 3umc_A          215 FIARPLEYGPGQSQDLAAEQDWDLIASDLLDL  246 (254)
T ss_dssp             EECCTTTTCTTCCSSSSCSSCCSEEESSHHHH
T ss_pred             EEecCCccCCCCCcccccCCCCcEEECCHHHH
Confidence            998    33222211   34567888888775

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.28  E-value=3.2e-11  Score=100.42  Aligned_cols=104  Identities=31%  Similarity=0.536  Sum_probs=89.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||.....+...+ +.+++..+|+.++++++....||+|+.|..++++++++++++++|||+.+|+.+++.+|+.++
T Consensus       113 ~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~  191 (226)
T 1te2_A          113 VGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSI  191 (226)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred             EEEEeCCcHHHHHHHH-HhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEE
Confidence            4689999988887666 788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcc-cccccccEEEeccccc
Q 023972           81 AVPSLPKQT-HRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~-~~iSss~~ii~~l~e~  105 (274)
                      .+.++.... .....++.++.++.++
T Consensus       192 ~~~~~~~~~~~~~~~a~~v~~~~~el  217 (226)
T 1te2_A          192 VVPAPEAQNDPRFVLANVKLSSLTEL  217 (226)
T ss_dssp             ECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred             EEcCCCCcccccccccCeEECCHHHH
Confidence            998764322 2234566888887765

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.27  E-value=3.5e-11  Score=100.13  Aligned_cols=104  Identities=29%  Similarity=0.400  Sum_probs=89.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||.....+...+ +.+++..+|+.++++++....||+|+.|..++++++++|++++++||+.+|+.+++.+|+.++
T Consensus       108 ~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~  186 (225)
T 3d6j_A          108 IGIISTKYRFRILSFL-RNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFT  186 (225)
T ss_dssp             EEEECSSCHHHHHHHH-HTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             EEEEECCCHHHHHHHH-HHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEE
Confidence            3689999988887766 788999999999999998999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCccccc--ccccEEEeccccc
Q 023972           81 AVPSLPKQTHRY--TAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~i--Sss~~ii~~l~e~  105 (274)
                      .+.++.......  ..++.++.++.++
T Consensus       187 ~~~~~~~~~~~l~~~~ad~v~~~~~el  213 (225)
T 3d6j_A          187 GVTSGMTTAQEFQAYPYDRIISTLGQL  213 (225)
T ss_dssp             EETTSSCCTTGGGGSCCSEEESSGGGG
T ss_pred             EECCCCCChHHHhhcCCCEEECCHHHH
Confidence            998764333222  2267888888775

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.27  E-value=7e-12  Score=106.49  Aligned_cols=102  Identities=25%  Similarity=0.334  Sum_probs=87.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +.+|+.  |+.+++++++...||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++
T Consensus       134 ~~i~t~~~~~~~~~~l-~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~  210 (254)
T 3umg_A          134 IGPLSNGNTSLLLDMA-KNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATA  210 (254)
T ss_dssp             EEECSSSCHHHHHHHH-HHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred             EEEEeCCCHHHHHHHH-HhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEE
Confidence            4789999999888666 778885  9999999999999999999999999999999999999999999999999999999


Q ss_pred             EecC----CCCccc---ccccccEEEeccccc
Q 023972           81 AVPS----LPKQTH---RYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~----~~~~~~---~iSss~~ii~~l~e~  105 (274)
                      .++.    +.....   ....++.+++++.++
T Consensus       211 ~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el  242 (254)
T 3umg_A          211 FILRPVEHGPHQTDDLAPTGSWDISATDITDL  242 (254)
T ss_dssp             EECCTTTTCTTCCSCSSCSSCCSEEESSHHHH
T ss_pred             EEecCCcCCCCccccccccCCCceEECCHHHH
Confidence            9983    322221   135567899988875

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.26  E-value=5e-12  Score=107.06  Aligned_cols=85  Identities=20%  Similarity=0.283  Sum_probs=76.7

Q ss_pred             CEEEcCCChHHHHHHHH-----HHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc
Q 023972            1 MALASNSHRATIESKIS-----YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA   75 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~-----~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a   75 (274)
                      ++|+||++...+...+.     +.+|+..+||.++++++++..||+|+.|..++++++++|++|++|||+..|+.+|+++
T Consensus       130 ~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~a  209 (229)
T 4dcc_A          130 VYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQEL  209 (229)
T ss_dssp             EEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHT
T ss_pred             EEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHc
Confidence            47999999998764331     4568889999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEecCC
Q 023972           76 GMEVVAVPSL   85 (274)
Q Consensus        76 Gi~vi~V~~~   85 (274)
                      |+.++++++.
T Consensus       210 G~~~i~v~~~  219 (229)
T 4dcc_A          210 GISTYTPKAG  219 (229)
T ss_dssp             TCEEECCCTT
T ss_pred             CCEEEEECCH
Confidence            9999999875

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.26  E-value=6.8e-12  Score=104.36  Aligned_cols=84  Identities=23%  Similarity=0.326  Sum_probs=77.4

Q ss_pred             CEEEcCCChHHHHHHHHHH------cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHH
Q 023972            1 MALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA   74 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~------~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~   74 (274)
                      ++|+||++...+...+ +.      +|+..+|+.++++++++..||+|+.|..++++++++|++|++|||+..|+.+|++
T Consensus       107 ~~i~t~~~~~~~~~~~-~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~  185 (211)
T 2i6x_A          107 LFLLSNTNPYVLDLAM-SPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAER  185 (211)
T ss_dssp             EEEEECCCHHHHHHHT-STTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHH
T ss_pred             EEEEeCCCHHHHHHHH-hhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHH
Confidence            4799999998887655 66      7999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCEEEEecCC
Q 023972           75 AGMEVVAVPSL   85 (274)
Q Consensus        75 aGi~vi~V~~~   85 (274)
                      +|+.++.+++.
T Consensus       186 aG~~~~~~~~~  196 (211)
T 2i6x_A          186 LGFHTYCPDNG  196 (211)
T ss_dssp             TTCEEECCCTT
T ss_pred             cCCEEEEECCH
Confidence            99999998764

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.24  E-value=1.6e-11  Score=103.29  Aligned_cols=104  Identities=13%  Similarity=0.145  Sum_probs=86.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC-CCCCCHHHHHHHHHHhC--CCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~-~~KP~pe~f~~~l~~l~--v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||+.+..+...+ +.+|+..+|+.++++++.. ..||.|+.|..+++++|  ++|++|++|||+.+|+.+|+++|+
T Consensus       113 ~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~  191 (234)
T 2hcf_A          113 LGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDA  191 (234)
T ss_dssp             EEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred             EEEEcCCcHHHHHHHH-HHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCC
Confidence            4799999999888766 8889999999888887764 45689999999999999  899999999999999999999999


Q ss_pred             EEEEecCCCCccccc--ccccEEEeccccc
Q 023972           78 EVVAVPSLPKQTHRY--TAADEVINSLLDL  105 (274)
Q Consensus        78 ~vi~V~~~~~~~~~i--Sss~~ii~~l~e~  105 (274)
                      .++++.++.......  ..++.++.++.++
T Consensus       192 ~~i~v~~~~~~~~~~~~~~a~~v~~~~~el  221 (234)
T 2hcf_A          192 RSIAVATGNFTMEELARHKPGTLFKNFAET  221 (234)
T ss_dssp             EEEEECCSSSCHHHHHTTCCSEEESCSCCH
T ss_pred             cEEEEcCCCCCHHHHHhCCCCEEeCCHHhH
Confidence            999998864332222  2366888888765

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.23  E-value=2.4e-11  Score=99.42  Aligned_cols=97  Identities=15%  Similarity=0.237  Sum_probs=86.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||....... .+ +.+++..+|+.++++++....||+|+.|..++++++++|++++++||+.+|+.+|+.+|+.++
T Consensus       104 ~~i~s~~~~~~~~-~~-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i  181 (207)
T 2go7_A          104 QFIYTHKGNNAFT-IL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI  181 (207)
T ss_dssp             EEEECSSCTHHHH-HH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             EEEEeCCchHHHH-HH-HHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEE
Confidence            4789999988887 66 778999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++..+. .     .++.++.++.++
T Consensus       182 ~~~~~~-~-----~a~~v~~~~~el  200 (207)
T 2go7_A          182 NFLEST-Y-----EGNHRIQALADI  200 (207)
T ss_dssp             ESSCCS-C-----TTEEECSSTTHH
T ss_pred             EEecCC-C-----CCCEEeCCHHHH
Confidence            998765 3     456788877664

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.23  E-value=1.9e-11  Score=103.23  Aligned_cols=102  Identities=25%  Similarity=0.286  Sum_probs=82.0

Q ss_pred             CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEEec------------CCCCCCCCCHHHHHHHHHHhC
Q 023972            1 MALASNSHR---------------ATIESKISYQHGWNESFSVIVGS------------DEVRTGKPSPDIFLEAAKRLN   53 (274)
Q Consensus         1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~~~------------~~~~~~KP~pe~f~~~l~~l~   53 (274)
                      ++|+||.+.               ..+...+ +.+|+.  |+.++.+            ++....||+|+.|..++++++
T Consensus        69 ~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lg  145 (211)
T 2gmw_A           69 LVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD--LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLH  145 (211)
T ss_dssp             EEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHT
T ss_pred             EEEEECcCCcCCCccCHHHHHHHHHHHHHHH-HHcCCc--eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcC
Confidence            479999994               6666656 788987  8876643            456789999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCEE-EEecCCCCcccc-cccccEEEeccccc
Q 023972           54 MEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDL  105 (274)
Q Consensus        54 v~p~~~vvvgD~~~di~aA~~aGi~v-i~V~~~~~~~~~-iSss~~ii~~l~e~  105 (274)
                      ++|++++||||+..|+.+|+++|+.+ +++.++...... ...++.+++++.++
T Consensus       146 i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el  199 (211)
T 2gmw_A          146 IDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL  199 (211)
T ss_dssp             BCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred             CCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHH
Confidence            99999999999999999999999999 999876432221 23466888888775

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.21  E-value=2.6e-11  Score=101.61  Aligned_cols=104  Identities=30%  Similarity=0.509  Sum_probs=88.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC-cEEEecCCCCCC--CCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTG--KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F-d~v~~~~~~~~~--KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||.....+...+ +++++..+| +.++++++....  ||+|+.|..+++++|++|+++++|||+.+|+.+|+.+|+
T Consensus       103 ~~i~s~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~  181 (229)
T 2fdr_A          103 RCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGM  181 (229)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTC
T ss_pred             EEEEECCChhHHHHHH-HhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCC
Confidence            4789999998888766 788999999 999999988888  999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCc-----c-cccccccEEEeccccc
Q 023972           78 EVVAVPSLPKQ-----T-HRYTAADEVINSLLDL  105 (274)
Q Consensus        78 ~vi~V~~~~~~-----~-~~iSss~~ii~~l~e~  105 (274)
                      .++++......     . .....++.++.++.++
T Consensus       182 ~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el  215 (229)
T 2fdr_A          182 RVIGFTGASHTYPSHADRLTDAGAETVISRMQDL  215 (229)
T ss_dssp             EEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred             EEEEEecCCccchhhhHHHhhcCCceeecCHHHH
Confidence            99999875432     0 1111256888888774

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.20  E-value=6.3e-12  Score=103.43  Aligned_cols=82  Identities=16%  Similarity=0.224  Sum_probs=68.4

Q ss_pred             CEEEcCC---------------ChHHHHHHHHHHcCCCCCCcEEEec-----CCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972            1 MALASNS---------------HRATIESKISYQHGWNESFSVIVGS-----DEVRTGKPSPDIFLEAAKRLNMEPSSSL   60 (274)
Q Consensus         1 laIvSn~---------------~~~~~~~~l~~~~gl~~~Fd~v~~~-----~~~~~~KP~pe~f~~~l~~l~v~p~~~v   60 (274)
                      ++|+||.               ....+...+ +.+|+.  ||.++.+     ++....||+|++|..++++++++|++++
T Consensus        61 l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l  137 (176)
T 2fpr_A           61 LVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQ--FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSY  137 (176)
T ss_dssp             EEEEEECTTTTBTTBCHHHHHHHHHHHHHHH-HHTTCC--EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCE
T ss_pred             EEEEECCccccccccchHhhhhhHHHHHHHH-HHcCCC--eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEE
Confidence            4799998               566666555 788986  9988754     7888999999999999999999999999


Q ss_pred             EEecCHhhHHHHHHcCCEEEEecCC
Q 023972           61 VIEDSVIGVVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        61 vvgD~~~di~aA~~aGi~vi~V~~~   85 (274)
                      ||||+..|+++|+++|+.++++.+.
T Consensus       138 ~VGD~~~Di~~A~~aG~~~i~v~~~  162 (176)
T 2fpr_A          138 VIGDRATDIQLAENMGINGLRYDRE  162 (176)
T ss_dssp             EEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             EEcCCHHHHHHHHHcCCeEEEEcCC
Confidence            9999999999999999999999775

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.20  E-value=5.4e-11  Score=103.93  Aligned_cols=106  Identities=23%  Similarity=0.355  Sum_probs=90.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCC-------CCCcEEEEecCHhhHHHHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-------EPSSSLVIEDSVIGVVAGK   73 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v-------~p~~~vvvgD~~~di~aA~   73 (274)
                      ++|+||+.+..+...+ +.+++. +|+.++++++....||+|+.|..+++++++       +|++|++|||+.+|+++|+
T Consensus       134 l~i~T~~~~~~~~~~l-~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~  211 (275)
T 2qlt_A          134 WAVATSGTRDMAKKWF-DILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGK  211 (275)
T ss_dssp             EEEECSSCHHHHHHHH-HHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHH
T ss_pred             EEEEeCCCHHHHHHHH-HHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHH
Confidence            4799999999888766 777886 589999999999999999999999999999       9999999999999999999


Q ss_pred             HcCCEEEEecCCCCcccc-cccccEEEecccccccc
Q 023972           74 AAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLRPE  108 (274)
Q Consensus        74 ~aGi~vi~V~~~~~~~~~-iSss~~ii~~l~e~~~~  108 (274)
                      ++|+.++.|.++...... ...++.++.++.++...
T Consensus       212 ~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~  247 (275)
T 2qlt_A          212 AAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVG  247 (275)
T ss_dssp             HTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEEC
T ss_pred             HcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChh
Confidence            999999999886432222 22467899998887554

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.19  E-value=4.1e-11  Score=99.75  Aligned_cols=100  Identities=28%  Similarity=0.337  Sum_probs=83.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||+  ..+...+ +++|+..+|+.++++++.+..||+|+.|..+++++|++|++|++|||+.+|+.+|+.+|+.++
T Consensus       110 ~~i~t~~--~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~  186 (221)
T 2wf7_A          110 IALASAS--KNGPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPI  186 (221)
T ss_dssp             EEECCCC--TTHHHHH-HHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             EEEEcCc--HHHHHHH-HHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEE
Confidence            4688888  3344445 788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDLRP  107 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~~~  107 (274)
                      .++..  .  ....++.++.++.++.+
T Consensus       187 ~~~~~--~--~~~~a~~v~~~~~el~~  209 (221)
T 2wf7_A          187 GVGRP--E--DLGDDIVIVPDTSHYTL  209 (221)
T ss_dssp             EESCH--H--HHCSSSEEESSGGGCCH
T ss_pred             EECCH--H--HhccccchhcCHHhCCH
Confidence            99642  1  12256688888877543

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.19  E-value=4.6e-11  Score=99.82  Aligned_cols=99  Identities=19%  Similarity=0.186  Sum_probs=80.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||.....+...+ +.+|+.++|+.++++     .||+|+.|..+++++|++|++|++|||+. +|+.+|+++|+.+
T Consensus       125 ~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~-----~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~  198 (234)
T 3ddh_A          125 LVVATKGDLLDQENKL-ERSGLSPYFDHIEVM-----SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYG  198 (234)
T ss_dssp             EEEEEESCHHHHHHHH-HHHTCGGGCSEEEEE-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEE
T ss_pred             EEEEeCCchHHHHHHH-HHhCcHhhhheeeec-----CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeE
Confidence            4789999998887766 788999999999874     58999999999999999999999999996 9999999999999


Q ss_pred             EEecCCC----Cccc-ccccccEEEeccccc
Q 023972           80 VAVPSLP----KQTH-RYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~----~~~~-~iSss~~ii~~l~e~  105 (274)
                      +++..+.    .... ....++.+++++.++
T Consensus       199 v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el  229 (234)
T 3ddh_A          199 VHIPFEVMWKHEVTETFAHERLKQVKRLDDL  229 (234)
T ss_dssp             EECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred             EEecCCcccccCCcccccCCCceecccHHHH
Confidence            9995542    1111 122336788888764

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.14  E-value=8.3e-12  Score=103.28  Aligned_cols=84  Identities=15%  Similarity=0.217  Sum_probs=75.0

Q ss_pred             CEEEcCCChHHHHHHHHHH-cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~-~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||++...+...+ ++ +|+..+|+.++++++.+..||+|+.|..++++++++|+++++|||+..|+.+|+++|+.+
T Consensus       110 ~~i~t~~~~~~~~~~~-~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~  188 (206)
T 2b0c_A          110 VVVLSNTNRLHTTFWP-EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITS  188 (206)
T ss_dssp             EEEEECCCCCTTSCCG-GGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred             EEEEECCChHHHHHHH-HhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeE
Confidence            4789999887765434 44 678889999999999899999999999999999999999999999999999999999999


Q ss_pred             EEecCC
Q 023972           80 VAVPSL   85 (274)
Q Consensus        80 i~V~~~   85 (274)
                      +.+.+.
T Consensus       189 ~~~~~~  194 (206)
T 2b0c_A          189 ILVKDK  194 (206)
T ss_dssp             EECCST
T ss_pred             EEecCC
Confidence            999764

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.12  E-value=3.3e-11  Score=113.15  Aligned_cols=82  Identities=21%  Similarity=0.330  Sum_probs=71.8

Q ss_pred             CEEEcCC------ChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHH
Q 023972            1 MALASNS------HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA   74 (274)
Q Consensus         1 laIvSn~------~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~   74 (274)
                      ++|+||+      .+..+...+   .|+.++||.++++++++..||+|+.|..+++++|++|++|++|||+..|+++|++
T Consensus       119 ~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~  195 (555)
T 3i28_A          119 TAILTNTWLDDRAERDGLAQLM---CELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARD  195 (555)
T ss_dssp             EEEEECCCCCCSTTHHHHHHHH---HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHH
T ss_pred             EEEEeCCCccccchhhHHHHHh---hhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHH
Confidence            5899998      444333222   2788899999999999999999999999999999999999999999999999999


Q ss_pred             cCCEEEEecCC
Q 023972           75 AGMEVVAVPSL   85 (274)
Q Consensus        75 aGi~vi~V~~~   85 (274)
                      +|+.++++...
T Consensus       196 aG~~~~~~~~~  206 (555)
T 3i28_A          196 LGMVTILVQDT  206 (555)
T ss_dssp             HTCEEEECSSH
T ss_pred             cCCEEEEECCC
Confidence            99999999764

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.12  E-value=7.4e-11  Score=101.69  Aligned_cols=86  Identities=21%  Similarity=0.295  Sum_probs=77.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC-cEEEecCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F-d~v~~~~~~~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.....+...+ +.+|+..+| +.+++++++...||+|+.|..+++++|++| +++++|||+.+|+.+|+.+|+.
T Consensus       122 ~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~  200 (267)
T 1swv_A          122 IGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMW  200 (267)
T ss_dssp             EEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred             EEEEcCCCHHHHHHHH-HHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCE
Confidence            3789999988887656 777888886 999999999999999999999999999999 9999999999999999999999


Q ss_pred             EEEecCCCC
Q 023972           79 VVAVPSLPK   87 (274)
Q Consensus        79 vi~V~~~~~   87 (274)
                      ++++..+..
T Consensus       201 ~i~v~~~~~  209 (267)
T 1swv_A          201 TVGVILGSS  209 (267)
T ss_dssp             EEEECTTCT
T ss_pred             EEEEcCCCC
Confidence            999988643

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.12  E-value=4.2e-11  Score=101.39  Aligned_cols=102  Identities=22%  Similarity=0.301  Sum_probs=79.0

Q ss_pred             CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEE-ec-----------CCCCCCCCCHHHHHHHHHHhC
Q 023972            1 MALASNSHR---------------ATIESKISYQHGWNESFSVIV-GS-----------DEVRTGKPSPDIFLEAAKRLN   53 (274)
Q Consensus         1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~-~~-----------~~~~~~KP~pe~f~~~l~~l~   53 (274)
                      ++|+||.+.               ..+...+ +++|+.  |+.++ +.           ++....||+|+.|..++++++
T Consensus        75 ~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~  151 (218)
T 2o2x_A           75 VVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGVF--VDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLA  151 (218)
T ss_dssp             EEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHT
T ss_pred             EEEEcCcCCCCcccccHHHHHHHHHHHHHHH-HHcCCc--eeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcC
Confidence            479999988               5666656 788885  77654 43           567889999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCEE-EEecCCCCcccc-cccccEEEeccccc
Q 023972           54 MEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDL  105 (274)
Q Consensus        54 v~p~~~vvvgD~~~di~aA~~aGi~v-i~V~~~~~~~~~-iSss~~ii~~l~e~  105 (274)
                      ++|++++||||+..|+.+|+++|+.+ +++.++...... ...++.++.++.++
T Consensus       152 i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el  205 (218)
T 2o2x_A          152 LDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDL  205 (218)
T ss_dssp             CCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHH
T ss_pred             CCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHH
Confidence            99999999999999999999999999 999886433221 12344455555553

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.11  E-value=2.6e-12  Score=112.87  Aligned_cols=104  Identities=17%  Similarity=0.262  Sum_probs=83.3

Q ss_pred             EEEcCCChHHH--HH-HHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHh----CCCCCcEEEEecCH-hhHHHHH
Q 023972            2 ALASNSHRATI--ES-KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL----NMEPSSSLVIEDSV-IGVVAGK   73 (274)
Q Consensus         2 aIvSn~~~~~~--~~-~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l----~v~p~~~vvvgD~~-~di~aA~   73 (274)
                      +|+||.+....  .. .+.+..++..+|+.+++++++...||+|+.|..+++++    +++|++|+||||+. .|+.+|+
T Consensus       164 ~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~  243 (284)
T 2hx1_A          164 AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGN  243 (284)
T ss_dssp             EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHH
T ss_pred             EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHH
Confidence            68999877654  21 11144578889999999998889999999999999999    99999999999995 8999999


Q ss_pred             HcCCEEEEecCCCCccccc--------ccccEEEeccccc
Q 023972           74 AAGMEVVAVPSLPKQTHRY--------TAADEVINSLLDL  105 (274)
Q Consensus        74 ~aGi~vi~V~~~~~~~~~i--------Sss~~ii~~l~e~  105 (274)
                      ++|+.++++.++.......        ..++.+++++.++
T Consensus       244 ~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          244 KFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE  283 (284)
T ss_dssp             HHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred             HcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence            9999999998865433221        2467888887654

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.10  E-value=1.6e-10  Score=98.96  Aligned_cols=99  Identities=15%  Similarity=0.117  Sum_probs=80.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||+....+...+ +.+|+..+|+.++++     .||+|+.|..++++++++|++|++|||+. +|+.+|+++|+.+
T Consensus       130 ~~i~t~~~~~~~~~~l-~~~~l~~~f~~i~~~-----~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~  203 (251)
T 2pke_A          130 VVLITKGDLFHQEQKI-EQSGLSDLFPRIEVV-----SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWG  203 (251)
T ss_dssp             EEEEEESCHHHHHHHH-HHHSGGGTCCCEEEE-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEE
T ss_pred             EEEEeCCCHHHHHHHH-HHcCcHHhCceeeee-----CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEE
Confidence            4789999998887766 788999999998874     58999999999999999999999999999 9999999999999


Q ss_pred             EEecCCCCcc------cccccccE-EEeccccc
Q 023972           80 VAVPSLPKQT------HRYTAADE-VINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~------~~iSss~~-ii~~l~e~  105 (274)
                      +++.++....      .....++. +++++.++
T Consensus       204 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el  236 (251)
T 2pke_A          204 IYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW  236 (251)
T ss_dssp             EECCCC-------------CCTTEEECSSGGGH
T ss_pred             EEECCCCccccccccccccCCCCeeeeCCHHHH
Confidence            9997753211      11234566 78888764

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.08  E-value=9.8e-12  Score=104.82  Aligned_cols=80  Identities=19%  Similarity=0.288  Sum_probs=61.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~v   79 (274)
                      ++|+||++.. +...+ +++|+.++||.++++++++..||+|+.|..++++++++|   ++|||+.. |+.+|+++|+.+
T Consensus       114 ~~i~Tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~  188 (220)
T 2zg6_A          114 LALVSNASPR-VKTLL-EKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDP  188 (220)
T ss_dssp             EEECCSCHHH-HHHHH-HHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEE
T ss_pred             EEEEeCCcHH-HHHHH-HhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeE
Confidence            4789999774 66555 788999999999999999999999999999999999987   99999999 999999999999


Q ss_pred             EEecCC
Q 023972           80 VAVPSL   85 (274)
Q Consensus        80 i~V~~~   85 (274)
                      +++.+.
T Consensus       189 i~v~~~  194 (220)
T 2zg6_A          189 ILLDRY  194 (220)
T ss_dssp             EEBCTT
T ss_pred             EEECCC
Confidence            999764

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.05  E-value=7e-10  Score=91.55  Aligned_cols=81  Identities=11%  Similarity=0.010  Sum_probs=71.0

Q ss_pred             CEEEcCCC-hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~-~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||.+ +..+...+ +.+|+..+|+.+++..     +|+|+.|..++++++++|++|++|||+..|+.+|+++|+.+
T Consensus        87 v~ivT~~~~~~~~~~~l-~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~  160 (187)
T 2wm8_A           87 GAAASRTSEIEGANQLL-ELFDLFRYFVHREIYP-----GSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC  160 (187)
T ss_dssp             EEEEECCSCHHHHHHHH-HHTTCTTTEEEEEESS-----SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred             EEEEeCCCChHHHHHHH-HHcCcHhhcceeEEEe-----CchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence            47999998 68787666 8899999999886543     57789999999999999999999999999999999999999


Q ss_pred             EEecCCCC
Q 023972           80 VAVPSLPK   87 (274)
Q Consensus        80 i~V~~~~~   87 (274)
                      +.+.++..
T Consensus       161 i~v~~g~~  168 (187)
T 2wm8_A          161 IHIQNGMN  168 (187)
T ss_dssp             EECSSSCC
T ss_pred             EEECCCCC
Confidence            99987643

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.04  E-value=6.4e-10  Score=90.59  Aligned_cols=81  Identities=26%  Similarity=0.361  Sum_probs=72.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||.+. .+...+ +++|+..+|+.+++++++...||+|+.|..++++++++  ++++|||+.+|+.+|+.+|+.++
T Consensus       101 ~~i~t~~~~-~~~~~l-~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~  176 (190)
T 2fi1_A          101 HFLVSHRND-QVLEIL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTH  176 (190)
T ss_dssp             EEEECSSCT-HHHHHH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEE
T ss_pred             EEEEECCcH-HHHHHH-HHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEE
Confidence            478999875 455555 78899999999999999999999999999999999997  99999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      .+.++
T Consensus       177 ~~~~~  181 (190)
T 2fi1_A          177 LFTSI  181 (190)
T ss_dssp             ECSCH
T ss_pred             EECCC
Confidence            98763

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.02  E-value=1.9e-11  Score=105.89  Aligned_cols=105  Identities=16%  Similarity=0.181  Sum_probs=80.7

Q ss_pred             EEcCCChHH--HHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEE
Q 023972            3 LASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEV   79 (274)
Q Consensus         3 IvSn~~~~~--~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~v   79 (274)
                      |+||.+...  ....+....++..+|+.++++++....||+|+.|..++++++++|++|++|||+ ..|+.+|+++|+.+
T Consensus       145 i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~  224 (264)
T 1yv9_A          145 IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDS  224 (264)
T ss_dssp             EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEE
T ss_pred             EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcE
Confidence            678877632  111011233466788888888888899999999999999999999999999999 59999999999999


Q ss_pred             EEecCCCCcccccc----cccEEEeccccccc
Q 023972           80 VAVPSLPKQTHRYT----AADEVINSLLDLRP  107 (274)
Q Consensus        80 i~V~~~~~~~~~iS----ss~~ii~~l~e~~~  107 (274)
                      ++|.++........    .++.+++++.++..
T Consensus       225 i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~  256 (264)
T 1yv9_A          225 LLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF  256 (264)
T ss_dssp             EEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred             EEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence            99988654332211    57799999887644

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.00  E-value=5.3e-10  Score=93.05  Aligned_cols=96  Identities=15%  Similarity=0.128  Sum_probs=78.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEe----------cCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~----------~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+||+....+...+ +.+|+..+|+.+++          +++....||+|+.|..++++++++|+++++|||+..|+.
T Consensus        94 ~~i~S~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~  172 (217)
T 3m1y_A           94 VVCFSGGFDLATNHYR-DLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLS  172 (217)
T ss_dssp             EEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHH
T ss_pred             EEEEcCCchhHHHHHH-HHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHH
Confidence            4799999999888766 78899999998874          344567899999999999999999999999999999999


Q ss_pred             HHHHcCCEEEEecCCCCcccccccccEEEec
Q 023972           71 AGKAAGMEVVAVPSLPKQTHRYTAADEVINS  101 (274)
Q Consensus        71 aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~  101 (274)
                      +|+.+|+.++. ..   .......++.++.+
T Consensus       173 ~a~~aG~~~~~-~~---~~~l~~~ad~v~~~  199 (217)
T 3m1y_A          173 MFKHAHIKIAF-NA---KEVLKQHATHCINE  199 (217)
T ss_dssp             HHTTCSEEEEE-SC---CHHHHTTCSEEECS
T ss_pred             HHHHCCCeEEE-Cc---cHHHHHhcceeecc
Confidence            99999999876 32   12222445666654

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=98.94  E-value=6.4e-11  Score=101.65  Aligned_cols=102  Identities=18%  Similarity=0.172  Sum_probs=77.5

Q ss_pred             EEcCCChHHHHHHHHHHcCCCCCCc---EEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCE
Q 023972            3 LASNSHRATIESKISYQHGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGME   78 (274)
Q Consensus         3 IvSn~~~~~~~~~l~~~~gl~~~Fd---~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~   78 (274)
                      ++||.........+ ...++..+|+   .++++++....||+|+.|..+++++|++|++|++|||+. +|+.+|+++|+.
T Consensus       141 i~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~  219 (259)
T 2ho4_A          141 IAIHKARYYKRKDG-LALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGML  219 (259)
T ss_dssp             EESCCCSEEEETTE-EEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCE
T ss_pred             EEECCCCcCcccCC-cccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCc
Confidence            56666554433333 4456666776   556677778899999999999999999999999999998 999999999999


Q ss_pred             EEEecCCCC-cccc---cccccEEEeccccc
Q 023972           79 VVAVPSLPK-QTHR---YTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~-~~~~---iSss~~ii~~l~e~  105 (274)
                      ++++.++.. ....   ...++.+++++.++
T Consensus       220 ~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l  250 (259)
T 2ho4_A          220 GILVKTGKYKAADEEKINPPPYLTCESFPHA  250 (259)
T ss_dssp             EEEESSTTCCTTGGGGSSSCCSEEESCHHHH
T ss_pred             EEEECCCCCCcccccccCCCCCEEECCHHHH
Confidence            999988632 2111   23466888888764

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.85  E-value=3.4e-09  Score=85.07  Aligned_cols=91  Identities=14%  Similarity=0.170  Sum_probs=70.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +++|+..+|+.         .||+|+.|..++++++++|+++++|||+..|+.+|+++|+.++
T Consensus        55 ~~i~T~~~~~~~~~~l-~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~  124 (162)
T 2p9j_A           55 LAVISGRDSAPLITRL-KELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVA  124 (162)
T ss_dssp             EEEEESCCCHHHHHHH-HHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             EEEEeCCCcHHHHHHH-HHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence            4799999999888766 88899877753         7999999999999999999999999999999999999999976


Q ss_pred             EecCCCCcccccccccEEEecccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLD  104 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e  104 (274)
                      ....   .......++.++.++.+
T Consensus       125 ~~~~---~~~~~~~a~~v~~~~~~  145 (162)
T 2p9j_A          125 VRNA---VEEVRKVAVYITQRNGG  145 (162)
T ss_dssp             CTTS---CHHHHHHCSEECSSCSS
T ss_pred             ecCc---cHHHHhhCCEEecCCCC
Confidence            5432   11112234567776654

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.84  E-value=5.8e-09  Score=92.29  Aligned_cols=81  Identities=15%  Similarity=0.044  Sum_probs=67.2

Q ss_pred             CEEEcCCChHH---HHHHHHHH--------cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCc-EEEEecCHhh
Q 023972            1 MALASNSHRAT---IESKISYQ--------HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS-SLVIEDSVIG   68 (274)
Q Consensus         1 laIvSn~~~~~---~~~~l~~~--------~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~-~vvvgD~~~d   68 (274)
                      ++|+||++...   +...| ++        +|+  +|+.++++++. ..||+|+.+..++++++..+.+ ++||||+..|
T Consensus       207 ~~v~T~k~~~~~~~~~~~l-~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~d  282 (301)
T 1ltq_A          207 IVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQV  282 (301)
T ss_dssp             EEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHH
T ss_pred             EEEEeCCCcccchhHHHHH-HhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHHHHhccccceEEEeCCcHHH
Confidence            58999998653   23345 55        788  59999988775 5799999999999999877644 7999999999


Q ss_pred             HHHHHHcCCEEEEecCC
Q 023972           69 VVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        69 i~aA~~aGi~vi~V~~~   85 (274)
                      +++|+++|+.++.|.++
T Consensus       283 i~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          283 VEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHHHHHTTCCEEECSCC
T ss_pred             HHHHHHcCCeEEEecCC
Confidence            99999999999999886

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=98.82  E-value=1.4e-10  Score=103.05  Aligned_cols=103  Identities=19%  Similarity=0.331  Sum_probs=80.2

Q ss_pred             EEEcCCChHHH--H-HHHHHHcC-CCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcC
Q 023972            2 ALASNSHRATI--E-SKISYQHG-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAG   76 (274)
Q Consensus         2 aIvSn~~~~~~--~-~~l~~~~g-l~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aG   76 (274)
                      +|+||.+....  . ..+ ..+| +..+|+.++++++....||+|+.|..++++++++|+++++|||+. +|+.+|+++|
T Consensus       175 ~i~tn~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG  253 (306)
T 2oyc_A          175 LVATDRDPWHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCG  253 (306)
T ss_dssp             EEESCCCCEEECTTSCEE-ECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred             EEEEcCCccccCCCCCcC-CCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCC
Confidence            67788776543  1 111 2334 566788888888888999999999999999999999999999996 9999999999


Q ss_pred             CEEEEecCCCCcccc----------cccccEEEeccccc
Q 023972           77 MEVVAVPSLPKQTHR----------YTAADEVINSLLDL  105 (274)
Q Consensus        77 i~vi~V~~~~~~~~~----------iSss~~ii~~l~e~  105 (274)
                      +.+++|.++......          ...++.++.++.++
T Consensus       254 ~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el  292 (306)
T 2oyc_A          254 MTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL  292 (306)
T ss_dssp             CEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGG
T ss_pred             CeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHH
Confidence            999999886543221          13467899988875

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=98.82  E-value=2.3e-10  Score=99.43  Aligned_cols=100  Identities=15%  Similarity=0.194  Sum_probs=77.3

Q ss_pred             EEcCCChHHH--HHHHHHH-cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCE
Q 023972            3 LASNSHRATI--ESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGME   78 (274)
Q Consensus         3 IvSn~~~~~~--~~~l~~~-~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~   78 (274)
                      |+||.+....  ...+ .. .++..+|+.++++++....||+|+.|..++++  ++|++++||||+. .|+.+|+++|+.
T Consensus       149 i~tn~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~  225 (263)
T 1zjj_A          149 IGTNPDATLPGEEGIY-PGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMK  225 (263)
T ss_dssp             EESCCCSEEEETTEEE-ECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCE
T ss_pred             EEECCCccccCCCCCc-CCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCe
Confidence            7788876543  1112 22 35667888888888888999999999999988  8999999999996 899999999999


Q ss_pred             EEEecCCCCccccc----ccccEEEeccccc
Q 023972           79 VVAVPSLPKQTHRY----TAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~~i----Sss~~ii~~l~e~  105 (274)
                      +++|.++.......    ..++.+++++.++
T Consensus       226 ~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el  256 (263)
T 1zjj_A          226 AIMVLTGVSSLEDIKKSEYKPDLVLPSVYEL  256 (263)
T ss_dssp             EEEESSSSCCHHHHTTCSSCCSEEESSGGGG
T ss_pred             EEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence            99998864332211    1467888888775

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.81  E-value=4.3e-09  Score=98.04  Aligned_cols=81  Identities=15%  Similarity=0.279  Sum_probs=69.3

Q ss_pred             CEEEcCCC------------hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC----CCCCcEEEEec
Q 023972            1 MALASNSH------------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN----MEPSSSLVIED   64 (274)
Q Consensus         1 laIvSn~~------------~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~----v~p~~~vvvgD   64 (274)
                      ++|+||.+            ...+...| +++|+  +||.+++++++..+||+|++|..++++++    ++|++|+||||
T Consensus       106 l~IvTN~~gi~~g~~~~~~~~~~~~~~l-~~lgl--~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGD  182 (416)
T 3zvl_A          106 LVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGV--PFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGD  182 (416)
T ss_dssp             EEEEEECHHHHTTSSCHHHHHHHHHHHH-HHHTS--CCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECS
T ss_pred             EEEEeCCccccCCCCCHHHHHHHHHHHH-HHcCC--CEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEEC
Confidence            58999965            12255445 77888  49999999999999999999999999997    99999999999


Q ss_pred             CH-----------------hhHHHHHHcCCEEEEecC
Q 023972           65 SV-----------------IGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        65 ~~-----------------~di~aA~~aGi~vi~V~~   84 (274)
                      +.                 .|+.+|+++|+.++....
T Consensus       183 s~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe~  219 (416)
T 3zvl_A          183 AAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEE  219 (416)
T ss_dssp             CSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHHH
T ss_pred             CCCCcccccccccccCCChhhHHHHHHcCCcccCcHH
Confidence            97                 799999999999876654

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=98.81  E-value=3.1e-09  Score=88.06  Aligned_cols=80  Identities=11%  Similarity=0.010  Sum_probs=68.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC-cEEEecCCCCC---CCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRT---GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F-d~v~~~~~~~~---~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++|+||+.+..+...+ +++|+..+| +.++++++...   .+|+|+.|..+++++++.|.+|++|||+..|+.+|+++|
T Consensus        87 ~~i~s~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG  165 (206)
T 1rku_A           87 VVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAH  165 (206)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSS
T ss_pred             EEEEECChHHHHHHHH-HHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcC
Confidence            4799999999888666 888999999 57777666431   248889999999999999999999999999999999999


Q ss_pred             CEEEE
Q 023972           77 MEVVA   81 (274)
Q Consensus        77 i~vi~   81 (274)
                      +.++.
T Consensus       166 ~~~~~  170 (206)
T 1rku_A          166 AGILF  170 (206)
T ss_dssp             EEEEE
T ss_pred             ccEEE
Confidence            98664

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=98.78  E-value=7.3e-10  Score=93.49  Aligned_cols=101  Identities=21%  Similarity=0.276  Sum_probs=75.6

Q ss_pred             EEcCCChHHHHHHHHHHcC-CCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEEE
Q 023972            3 LASNSHRATIESKISYQHG-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVV   80 (274)
Q Consensus         3 IvSn~~~~~~~~~l~~~~g-l~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~vi   80 (274)
                      ++||.+ ......+ +.+| +..+|+.+.+.+.....||+|..|..+++++|++|++|++|||+ .+|+++++.+|+.++
T Consensus       141 i~t~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~  218 (250)
T 2c4n_A          141 IATNPD-THGRGFY-PACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI  218 (250)
T ss_dssp             EESCCC-SBSSTTC-BCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEE
T ss_pred             EEECCC-CCCCCee-ecchHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEE
Confidence            667765 2222112 2333 44566666677777889999999999999999999999999999 699999999999999


Q ss_pred             EecCCCCccccc----ccccEEEeccccc
Q 023972           81 AVPSLPKQTHRY----TAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~i----Sss~~ii~~l~e~  105 (274)
                      +|.++.......    ..++.+++++.++
T Consensus       219 ~v~~g~~~~~~~~~~~~~~~~v~~~~~el  247 (250)
T 2c4n_A          219 LVLSGVSSLDDIDSMPFRPSWIYPSVAEI  247 (250)
T ss_dssp             EESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred             EECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence            998865432222    3567888887764

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.75  E-value=6e-09  Score=83.78  Aligned_cols=72  Identities=11%  Similarity=0.055  Sum_probs=64.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +++|+..+|+.         .||+|+.|..++++++++|+++++|||+.+|+.+|+++|+.++
T Consensus        50 ~~i~T~~~~~~~~~~~-~~~gl~~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~  119 (164)
T 3e8m_A           50 VGILTGEKTEIVRRRA-EKLKVDYLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGV  119 (164)
T ss_dssp             EEEECSSCCHHHHHHH-HHTTCSEEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEEC
T ss_pred             EEEEeCCChHHHHHHH-HHcCCCEeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence            4799999999888766 88899877765         3999999999999999999999999999999999999999876


Q ss_pred             Ee
Q 023972           81 AV   82 (274)
Q Consensus        81 ~V   82 (274)
                      ..
T Consensus       120 ~~  121 (164)
T 3e8m_A          120 PA  121 (164)
T ss_dssp             CT
T ss_pred             cC
Confidence            54

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.74  E-value=6.2e-09  Score=87.45  Aligned_cols=101  Identities=12%  Similarity=0.116  Sum_probs=75.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCC--CCCcEEE--------ecCCCCC----CCCCHHHHHHHHHHhCCCCCcEEEEecCH
Q 023972            1 MALASNSHRATIESKISYQHGWN--ESFSVIV--------GSDEVRT----GKPSPDIFLEAAKRLNMEPSSSLVIEDSV   66 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~--~~Fd~v~--------~~~~~~~----~KP~pe~f~~~l~~l~v~p~~~vvvgD~~   66 (274)
                      ++|+||++...+...+ +++|+.  ++|+.++        ++.+...    .+|.|+.|..+++++++  ++|++|||+.
T Consensus       105 ~~i~T~~~~~~~~~~l-~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~  181 (225)
T 1nnl_A          105 VFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHF--KKIIMIGDGA  181 (225)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHCC--SCEEEEESSH
T ss_pred             EEEEeCChHHHHHHHH-HHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHHHHHHcCC--CcEEEEeCcH
Confidence            4799999999888766 888997  4887653        3333322    35777899999999998  7999999999


Q ss_pred             hhHHHHHHcCCEEEEecCCCCcccccccccEEEeccccc
Q 023972           67 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        67 ~di~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      .|+.+|+++|+ ++.+............++.+++++.++
T Consensus       182 ~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el  219 (225)
T 1nnl_A          182 TDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL  219 (225)
T ss_dssp             HHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred             HhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHH
Confidence            99999999999 777754322222223466888888764

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.73  E-value=7.3e-09  Score=93.11  Aligned_cols=80  Identities=15%  Similarity=0.123  Sum_probs=70.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEe----------cCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~----------~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+||+....+...+ +++|+..+|+.+++          +.+...+||+|+.|..++++++++|+++++|||+..|+.
T Consensus       198 v~IvSn~~~~~~~~~l-~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~  276 (317)
T 4eze_A          198 TAIISGGLDIFTQRLK-ARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLP  276 (317)
T ss_dssp             EEEEEEEEHHHHHHHH-HHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             EEEEeCccHHHHHHHH-HHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHH
Confidence            4799999999998766 88899999997765          334556799999999999999999999999999999999


Q ss_pred             HHHHcCCEEEE
Q 023972           71 AGKAAGMEVVA   81 (274)
Q Consensus        71 aA~~aGi~vi~   81 (274)
                      +|+++|+.+++
T Consensus       277 aa~~AG~~va~  287 (317)
T 4eze_A          277 MLEHAGTGIAW  287 (317)
T ss_dssp             HHHHSSEEEEE
T ss_pred             HHHHCCCeEEe
Confidence            99999998777

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=98.72  E-value=4.4e-10  Score=97.48  Aligned_cols=85  Identities=20%  Similarity=0.280  Sum_probs=69.0

Q ss_pred             CCCCCCcEEEecCC-CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEEEEecCCCCccccc----cc
Q 023972           21 GWNESFSVIVGSDE-VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TA   94 (274)
Q Consensus        21 gl~~~Fd~v~~~~~-~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~vi~V~~~~~~~~~i----Ss   94 (274)
                      ++..+|+.++++++ ....||+|..|..+++++|++|+++++|||+. +|+.+|+.+|+.++++.++.......    ..
T Consensus       176 ~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~  255 (271)
T 1vjr_A          176 SIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETK  255 (271)
T ss_dssp             HHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSC
T ss_pred             HHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCC
Confidence            45556777777777 88999999999999999999999999999995 99999999999999998865432211    24


Q ss_pred             ccEEEeccccc
Q 023972           95 ADEVINSLLDL  105 (274)
Q Consensus        95 s~~ii~~l~e~  105 (274)
                      ++.+++++.++
T Consensus       256 ~~~~i~~l~el  266 (271)
T 1vjr_A          256 PDFVFKNLGEL  266 (271)
T ss_dssp             CSEEESSHHHH
T ss_pred             CCEEECCHHHH
Confidence            66888887664

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.69  E-value=1.9e-09  Score=91.23  Aligned_cols=79  Identities=11%  Similarity=0.132  Sum_probs=63.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC---CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSD---EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~---~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||.++..+...+ +.  +.++|+.++.+.   ++...||+|+.|..+++++++    |++|||+..|+++|+++|+
T Consensus       107 l~ivTn~~~~~~~~~l-~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~  179 (211)
T 2b82_A          107 IFFVTGRSPTKTETVS-KT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGA  179 (211)
T ss_dssp             EEEEECSCCCSSCCHH-HH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTC
T ss_pred             EEEEcCCcHHHHHHHH-HH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCC
Confidence            4799999877655444 44  566788764322   345689999999999999987    9999999999999999999


Q ss_pred             EEEEecCCC
Q 023972           78 EVVAVPSLP   86 (274)
Q Consensus        78 ~vi~V~~~~   86 (274)
                      .++++.++.
T Consensus       180 ~~i~v~~g~  188 (211)
T 2b82_A          180 RGIRILRAS  188 (211)
T ss_dssp             EEEECCCCT
T ss_pred             eEEEEecCC
Confidence            999998754

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.68  E-value=1.5e-08  Score=87.86  Aligned_cols=85  Identities=18%  Similarity=0.225  Sum_probs=70.2

Q ss_pred             CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEEEEecCCCCcccccc----cccEE
Q 023972           24 ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT----AADEV   98 (274)
Q Consensus        24 ~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~vi~V~~~~~~~~~iS----ss~~i   98 (274)
                      .+|+.+++.+.....||+|+.|..++++++++|+++++|||+ .+|+.+|+++|+.+++|.++........    .++.+
T Consensus       167 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~  246 (264)
T 3epr_A          167 ALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYV  246 (264)
T ss_dssp             HHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEE
T ss_pred             HHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEE
Confidence            345555666777889999999999999999999999999999 6999999999999999998754433322    57899


Q ss_pred             Eecccccccc
Q 023972           99 INSLLDLRPE  108 (274)
Q Consensus        99 i~~l~e~~~~  108 (274)
                      ++++.++...
T Consensus       247 ~~~l~~l~~~  256 (264)
T 3epr_A          247 LASLDEWTFN  256 (264)
T ss_dssp             ESCGGGCCSC
T ss_pred             ECCHHHHhcc
Confidence            9999886443

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.67  E-value=3.2e-08  Score=82.27  Aligned_cols=70  Identities=14%  Similarity=0.221  Sum_probs=63.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.++..+...+ +.+|+..+|+.+         ||+|+.+..++++++++|+++++|||+.+|+.+++.+|+.+.
T Consensus        65 ~~ivTn~~~~~~~~~l-~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~  134 (191)
T 3n1u_A           65 VAIITTAQNAVVDHRM-EQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVA  134 (191)
T ss_dssp             EEEECSCCSHHHHHHH-HHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             EEEEeCcChHHHHHHH-HHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEE
Confidence            4799999999998766 888998877754         899999999999999999999999999999999999999874

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.66  E-value=7.6e-09  Score=87.67  Aligned_cols=97  Identities=13%  Similarity=0.065  Sum_probs=73.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh---hHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI---GVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~---di~aA~~aGi   77 (274)
                      ++|+||+++..+...+ +++|+.++|+.+++.   ...|  |..+..+++  +++|++|++|||+..   |+++|+++|+
T Consensus       114 ~~i~Tn~~~~~~~~~l-~~~gl~~~f~~~~~~---~~~K--~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~  185 (231)
T 2p11_A          114 TVILSDGDVVFQPRKI-ARSGLWDEVEGRVLI---YIHK--ELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARL  185 (231)
T ss_dssp             EEEEEECCSSHHHHHH-HHTTHHHHTTTCEEE---ESSG--GGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGE
T ss_pred             EEEEeCCCHHHHHHHH-HHcCcHHhcCeeEEe---cCCh--HHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCC
Confidence            4799999999888777 888999999876542   2344  455554444  789999999999999   8999999999


Q ss_pred             EEEEecCCCC--cccc--cc-cccEEEeccccc
Q 023972           78 EVVAVPSLPK--QTHR--YT-AADEVINSLLDL  105 (274)
Q Consensus        78 ~vi~V~~~~~--~~~~--iS-ss~~ii~~l~e~  105 (274)
                      .++++.++..  ....  .. .++.+++++.++
T Consensus       186 ~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el  218 (231)
T 2p11_A          186 TTVFPRQGHYAFDPKEISSHPPADVTVERIGDL  218 (231)
T ss_dssp             EEEEECCSSSSSCHHHHHHSCCCSEEESSGGGG
T ss_pred             eEEEeCCCCCCCcchhccccCCCceeecCHHHH
Confidence            9999988632  1111  12 267888888875

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=98.63  E-value=1.2e-08  Score=86.91  Aligned_cols=76  Identities=16%  Similarity=0.068  Sum_probs=64.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCC--------CCCCHHH-HH-------HHHHHhCCCCCcEEEEec
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT--------GKPSPDI-FL-------EAAKRLNMEPSSSLVIED   64 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~--------~KP~pe~-f~-------~~l~~l~v~p~~~vvvgD   64 (274)
                      ++|+||++...+...+ +  |+.++ +.++++++...        .||+|.. +.       .++++++++|+++++|||
T Consensus        96 ~~ivS~~~~~~~~~~l-~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGD  171 (236)
T 2fea_A           96 FYVISGGMDFFVYPLL-E--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGD  171 (236)
T ss_dssp             EEEEEEEEHHHHHHHH-T--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEEC
T ss_pred             EEEEeCCcHHHHHHHH-h--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcHHHHHHHHhccCCeEEEEeC
Confidence            4899999998887655 4  78776 88998876553        7999984 54       788999999999999999


Q ss_pred             CHhhHHHHHHcCCEEE
Q 023972           65 SVIGVVAGKAAGMEVV   80 (274)
Q Consensus        65 ~~~di~aA~~aGi~vi   80 (274)
                      +..|+.+|+++|+.++
T Consensus       172 s~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          172 SVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             CGGGHHHHHTCSEEEE
T ss_pred             ChHHHHHHHhCCeeee
Confidence            9999999999999886

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.61  E-value=4.2e-08  Score=83.08  Aligned_cols=89  Identities=15%  Similarity=0.147  Sum_probs=70.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+..+|+.+         ||.|+.+..++++++++|++|++|||+.+|+.+++++|+.++
T Consensus        95 l~I~T~~~~~~~~~~l-~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a  164 (211)
T 3ij5_A           95 VAIITGRRAKLLEDRA-NTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVA  164 (211)
T ss_dssp             EEEECSSCCHHHHHHH-HHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE
T ss_pred             EEEEeCCCHHHHHHHH-HHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEE
Confidence            4899999999888766 888998877753         888999999999999999999999999999999999998866


Q ss_pred             EecCCCCcccccccccEEEecc
Q 023972           81 AVPSLPKQTHRYTAADEVINSL  102 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l  102 (274)
                      ....   .......++.+..+.
T Consensus       165 ~~~~---~~~~~~~Ad~v~~~~  183 (211)
T 3ij5_A          165 VADA---HPLLLPKAHYVTRIK  183 (211)
T ss_dssp             CTTS---CTTTGGGSSEECSSC
T ss_pred             eCCc---cHHHHhhCCEEEeCC
Confidence            5432   122223445665544

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.59  E-value=6.2e-08  Score=80.04  Aligned_cols=89  Identities=15%  Similarity=0.177  Sum_probs=70.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +++|+..+|+.         .||+|+.|..++++++++|+++++|||+.+|+.+++.+|+.++
T Consensus        72 v~ivT~~~~~~~~~~l-~~lgl~~~~~~---------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~  141 (188)
T 2r8e_A           72 VAIITGRKAKLVEDRC-ATLGITHLYQG---------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVA  141 (188)
T ss_dssp             EEEECSSCCHHHHHHH-HHHTCCEEECS---------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred             EEEEeCCChHHHHHHH-HHcCCceeecC---------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEE
Confidence            4799999999888766 78898766642         5999999999999999999999999999999999999999886


Q ss_pred             EecCCCCcccccccccEEEecc
Q 023972           81 AVPSLPKQTHRYTAADEVINSL  102 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l  102 (274)
                      .... .  ......++.++.+.
T Consensus       142 ~~~~-~--~~~~~~ad~v~~~~  160 (188)
T 2r8e_A          142 VADA-H--PLLIPRADYVTRIA  160 (188)
T ss_dssp             CTTS-C--TTTGGGSSEECSSC
T ss_pred             ecCc-C--HHHHhcCCEEEeCC
Confidence            5432 1  11122345666655

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.57  E-value=6.7e-08  Score=80.01  Aligned_cols=71  Identities=13%  Similarity=0.139  Sum_probs=62.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.++..+...+ +++|+.++|+.+         ++.|+.+..++++++++|+++++|||+.+|+.+++++|+.++
T Consensus        65 ~~i~T~~~~~~~~~~~-~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~  134 (189)
T 3mn1_A           65 TAIISGRKTAIVERRA-KSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMA  134 (189)
T ss_dssp             EEEECSSCCHHHHHHH-HHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             EEEEECcChHHHHHHH-HHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence            4899999999998766 888998888764         566799999999999999999999999999999999998865


Q ss_pred             E
Q 023972           81 A   81 (274)
Q Consensus        81 ~   81 (274)
                      .
T Consensus       135 ~  135 (189)
T 3mn1_A          135 V  135 (189)
T ss_dssp             C
T ss_pred             e
Confidence            4

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.56  E-value=6.9e-08  Score=80.72  Aligned_cols=72  Identities=13%  Similarity=0.250  Sum_probs=63.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +.+|+..+|+.         .||.|+.+..++++++++|+++++|||+.+|+.+++.+|+.++
T Consensus        71 ~~ivT~~~~~~~~~~l-~~lgi~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va  140 (195)
T 3n07_A           71 IAIITGRRSQIVENRM-KALGISLIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVC  140 (195)
T ss_dssp             EEEECSSCCHHHHHHH-HHTTCCEEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred             EEEEECcCHHHHHHHH-HHcCCcEEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEE
Confidence            4899999999988766 88999877653         3899999999999999999999999999999999999998865


Q ss_pred             Ee
Q 023972           81 AV   82 (274)
Q Consensus        81 ~V   82 (274)
                      ..
T Consensus       141 ~~  142 (195)
T 3n07_A          141 VA  142 (195)
T ss_dssp             CT
T ss_pred             EC
Confidence            43

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.50  E-value=9e-08  Score=86.06  Aligned_cols=80  Identities=23%  Similarity=0.214  Sum_probs=69.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEE----------ecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIV----------GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~----------~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+||+....+...+ +++|+..+|+..+          .+++...+||+|+.|..++++++++|++++++||+.+|+.
T Consensus       197 ~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~  275 (335)
T 3n28_A          197 VAIASGGFTYFSDYLK-EQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLV  275 (335)
T ss_dssp             EEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             EEEEeCCcHHHHHHHH-HHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHH
Confidence            4789999998888655 8889988887543          2246677899999999999999999999999999999999


Q ss_pred             HHHHcCCEEEE
Q 023972           71 AGKAAGMEVVA   81 (274)
Q Consensus        71 aA~~aGi~vi~   81 (274)
                      +++.+|+.++.
T Consensus       276 ~a~~aG~~va~  286 (335)
T 3n28_A          276 MMAAAGLGVAY  286 (335)
T ss_dssp             HHHHSSEEEEE
T ss_pred             HHHHCCCeEEe
Confidence            99999998776

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.49  E-value=6.2e-08  Score=83.74  Aligned_cols=82  Identities=27%  Similarity=0.393  Sum_probs=65.2

Q ss_pred             CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEEEEecCCCCcccccc----cccEE
Q 023972           24 ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT----AADEV   98 (274)
Q Consensus        24 ~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~vi~V~~~~~~~~~iS----ss~~i   98 (274)
                      .+|+.+++.+.....||+|..|..+++++|++++++++|||+ .+|+.+|+.+|+.++++.++........    .++.+
T Consensus       168 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v  247 (266)
T 3pdw_A          168 SVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHA  247 (266)
T ss_dssp             HHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEE
T ss_pred             HHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEE
Confidence            345555566667789999999999999999999999999999 7999999999999999998754433322    37899


Q ss_pred             Eeccccc
Q 023972           99 INSLLDL  105 (274)
Q Consensus        99 i~~l~e~  105 (274)
                      ++++.++
T Consensus       248 ~~~~~el  254 (266)
T 3pdw_A          248 IDSLTEW  254 (266)
T ss_dssp             ESSGGGG
T ss_pred             eCCHHHH
Confidence            9988775

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.48  E-value=1e-07  Score=88.33  Aligned_cols=80  Identities=14%  Similarity=0.090  Sum_probs=69.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEE-------e---cCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIV-------G---SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~-------~---~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+||+....+...+ +++|+..+|+..+       +   .++...+||+|+.|..++++++++|+++++|||+.+|+.
T Consensus       275 ~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~  353 (415)
T 3p96_A          275 CGVVSGGFRRIIEPLA-EELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDID  353 (415)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             EEEEcCCcHHHHHHHH-HHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHH
Confidence            4799999999888766 8899988876432       2   235566899999999999999999999999999999999


Q ss_pred             HHHHcCCEEEE
Q 023972           71 AGKAAGMEVVA   81 (274)
Q Consensus        71 aA~~aGi~vi~   81 (274)
                      +|+++|+.+++
T Consensus       354 ~a~~aG~~va~  364 (415)
T 3p96_A          354 MLAAAGLGIAF  364 (415)
T ss_dssp             HHHHSSEEEEE
T ss_pred             HHHHCCCeEEE
Confidence            99999998876

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.46  E-value=2.3e-07  Score=76.00  Aligned_cols=89  Identities=16%  Similarity=0.161  Sum_probs=69.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.+...+...+ +.+|+..+|+.         .||.|+.+..++++++++|+++++|||+.+|+.+++.+|+.++
T Consensus        54 ~~i~Tg~~~~~~~~~~-~~lgl~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~  123 (180)
T 1k1e_A           54 VAVLSGRDSPILRRRI-ADLGIKLFFLG---------KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFA  123 (180)
T ss_dssp             EEEEESCCCHHHHHHH-HHHTCCEEEES---------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             EEEEeCCCcHHHHHHH-HHcCCceeecC---------CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE
Confidence            4799999999888766 78899876642         5899999999999999999999999999999999999999877


Q ss_pred             EecCCCCcccccccccEEEecc
Q 023972           81 AVPSLPKQTHRYTAADEVINSL  102 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l  102 (274)
                      ..+.   .......++.++.+.
T Consensus       124 ~~~~---~~~~~~~ad~v~~~~  142 (180)
T 1k1e_A          124 VADA---PIYVKNAVDHVLSTH  142 (180)
T ss_dssp             CTTS---CHHHHTTSSEECSSC
T ss_pred             eCCc---cHHHHhhCCEEecCC
Confidence            5422   111123345665554

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=98.45  E-value=8.3e-08  Score=79.05  Aligned_cols=103  Identities=15%  Similarity=0.103  Sum_probs=74.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCC--CCCcE--EEecCC----CCCCCCCHHHHHHHHHH-hCCCCCcEEEEecCHhhHHH
Q 023972            1 MALASNSHRATIESKISYQHGWN--ESFSV--IVGSDE----VRTGKPSPDIFLEAAKR-LNMEPSSSLVIEDSVIGVVA   71 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~--~~Fd~--v~~~~~----~~~~KP~pe~f~~~l~~-l~v~p~~~vvvgD~~~di~a   71 (274)
                      ++|+||+....+...+ +++|+.  .+|..  +++.+.    +...||+|..+.+.+.+ ++++|++++++||+.+|+.+
T Consensus       101 ~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~  179 (219)
T 3kd3_A          101 IWIFSGGLSESIQPFA-DYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQL  179 (219)
T ss_dssp             EEEEEEEEHHHHHHHH-HHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHH
T ss_pred             EEEEcCCcHHHHHHHH-HHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHH
Confidence            4789999999888766 788984  45653  332332    25688998888887755 49999999999999999999


Q ss_pred             HHHcCCEEEEecCCCCcc--cccccccEEEeccccc
Q 023972           72 GKAAGMEVVAVPSLPKQT--HRYTAADEVINSLLDL  105 (274)
Q Consensus        72 A~~aGi~vi~V~~~~~~~--~~iSss~~ii~~l~e~  105 (274)
                      + ++|+.++++.......  .....++.+++++.++
T Consensus       180 ~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el  214 (219)
T 3kd3_A          180 Y-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL  214 (219)
T ss_dssp             H-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred             H-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence            8 5799877765543222  1234466888877664

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.45  E-value=2.2e-07  Score=75.98  Aligned_cols=71  Identities=10%  Similarity=0.089  Sum_probs=60.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+. +|    ..     .||.|+.+..+++++++++++++++||+.+|+.+++.+|+.++
T Consensus        58 ~~i~T~~~~~~~~~~~-~~lgi~-~~----~~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~  126 (176)
T 3mmz_A           58 MLILSTEQNPVVAARA-RKLKIP-VL----HG-----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVA  126 (176)
T ss_dssp             EEEEESSCCHHHHHHH-HHHTCC-EE----ES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             EEEEECcChHHHHHHH-HHcCCe-eE----eC-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEE
Confidence            4799999999988766 888986 33    22     2899999999999999999999999999999999999998765


Q ss_pred             Ee
Q 023972           81 AV   82 (274)
Q Consensus        81 ~V   82 (274)
                      ..
T Consensus       127 ~~  128 (176)
T 3mmz_A          127 VA  128 (176)
T ss_dssp             CT
T ss_pred             CC
Confidence            43

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.40  E-value=4.8e-07  Score=74.19  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=71.7

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCC----------CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV   70 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~----------~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~   70 (274)
                      ++|+|+.....+...+ +.+++..+|+.++...+          ....++.|+.+..++++++++|++|+++||+.+|+.
T Consensus        95 ~~i~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~  173 (211)
T 1l7m_A           95 VAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDIS  173 (211)
T ss_dssp             EEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             EEEEcCCcHHHHHHHH-HHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHH
Confidence            4789998888776555 77888877765443221          123455689999999999999999999999999999


Q ss_pred             HHHHcCCEEEEecCCCCcccccccccEEEec--cccc
Q 023972           71 AGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDL  105 (274)
Q Consensus        71 aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~--l~e~  105 (274)
                      +++.+|+.+. +..  . ......++.++.+  +.++
T Consensus       174 ~~~~ag~~~~-~~~--~-~~~~~~a~~v~~~~~~~~l  206 (211)
T 1l7m_A          174 MFKKAGLKIA-FCA--K-PILKEKADICIEKRDLREI  206 (211)
T ss_dssp             HHHHCSEEEE-ESC--C-HHHHTTCSEEECSSCGGGG
T ss_pred             HHHHCCCEEE-ECC--C-HHHHhhcceeecchhHHHH
Confidence            9999999754 432  1 1112345677776  5553

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.37  E-value=4.2e-07  Score=78.41  Aligned_cols=71  Identities=37%  Similarity=0.429  Sum_probs=60.7

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEEEEecCCCCcccccc--------cccEEEeccccc
Q 023972           35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDL  105 (274)
Q Consensus        35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~vi~V~~~~~~~~~iS--------ss~~ii~~l~e~  105 (274)
                      ...+||+|..|..++++++++|+++++|||+ .+|+.+|+++|+.+++|.++........        .++.++.++.++
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el  262 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM  262 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence            5679999999999999999999999999999 5999999999999999988754433322        567888888764

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.36  E-value=2.1e-08  Score=84.07  Aligned_cols=78  Identities=12%  Similarity=0.063  Sum_probs=69.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+|++.+.++...+ +.+++..+|+.+++.+++...|   +.|++.++++|.++++||+|+|+..++.++.++|+.+.
T Consensus        86 i~I~Tss~~~~a~~vl-~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~  161 (195)
T 2hhl_A           86 CVLFTASLAKYADPVA-DLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ  161 (195)
T ss_dssp             EEEECSSCHHHHHHHH-HHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred             EEEEcCCCHHHHHHHH-HHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence            5899999999999766 8899999999999999877666   67888999999999999999999999999999998864


Q ss_pred             Ee
Q 023972           81 AV   82 (274)
Q Consensus        81 ~V   82 (274)
                      ..
T Consensus       162 ~~  163 (195)
T 2hhl_A          162 SW  163 (195)
T ss_dssp             CC
T ss_pred             ee
Confidence            43

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.35  E-value=6e-07  Score=75.38  Aligned_cols=82  Identities=13%  Similarity=-0.018  Sum_probs=65.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC----------CCCCCCCCHHHHHHHHHHhC---CCCCcEEEEecCHh
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSD----------EVRTGKPSPDIFLEAAKRLN---MEPSSSLVIEDSVI   67 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~----------~~~~~KP~pe~f~~~l~~l~---v~p~~~vvvgD~~~   67 (274)
                      ++|+||+.+..+...+ +++|+..+|...+...          .....++.++.+..++++++   ++|++|+++||+..
T Consensus       111 ~~ivS~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~  189 (232)
T 3fvv_A          111 CALVTATNSFVTAPIA-RAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVN  189 (232)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGG
T ss_pred             EEEEeCCCHHHHHHHH-HHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHh
Confidence            4799999999988766 8889987665433211          22345667788888999999   99999999999999


Q ss_pred             hHHHHHHcCCEEEEec
Q 023972           68 GVVAGKAAGMEVVAVP   83 (274)
Q Consensus        68 di~aA~~aGi~vi~V~   83 (274)
                      |+.+++.+|+.++..+
T Consensus       190 D~~~~~~ag~~~~~~~  205 (232)
T 3fvv_A          190 DVPLLEAVTRPIAANP  205 (232)
T ss_dssp             GHHHHHHSSEEEEESC
T ss_pred             hHHHHHhCCCeEEECc
Confidence            9999999999887643

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=98.29  E-value=8.8e-07  Score=75.59  Aligned_cols=73  Identities=23%  Similarity=0.371  Sum_probs=59.7

Q ss_pred             CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEEEEecCCCC-cccc---cccccEEEeccccc
Q 023972           33 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK-QTHR---YTAADEVINSLLDL  105 (274)
Q Consensus        33 ~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~vi~V~~~~~-~~~~---iSss~~ii~~l~e~  105 (274)
                      +.....||+|+.|..+++++|++|++|++|||+. +|+.+|+.+|+.+++|.++.. ....   ...++.+++++.++
T Consensus       184 ~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el  261 (271)
T 2x4d_A          184 KAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEA  261 (271)
T ss_dssp             CCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHH
T ss_pred             ceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHH
Confidence            3455789999999999999999999999999998 999999999999999988632 2211   13367888888764

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=97.49  E-value=2.1e-07  Score=81.07  Aligned_cols=90  Identities=18%  Similarity=0.183  Sum_probs=68.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.++..+...+ +++|+.++|+.++           |+.+..++++++.++.+|+||||+.+|+.+++++|+.+.
T Consensus       155 ~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va  222 (263)
T 2yj3_A          155 IIILSGDKEDKVKELS-KELNIQEYYSNLS-----------PEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVA  222 (263)
Confidence            4789999999888766 8889999998776           566788999999999999999999999999999997654


Q ss_pred             EecCCCCcccccccccEEE--eccccc
Q 023972           81 AVPSLPKQTHRYTAADEVI--NSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii--~~l~e~  105 (274)
                      +-   .........++.++  +++.++
T Consensus       223 ~g---~~~~~~~~~ad~v~~~~~l~~l  246 (263)
T 2yj3_A          223 MG---NGVDISKNVADIILVSNDIGTL  246 (263)
Confidence            43   22222233455666  566553

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.11  E-value=3.1e-06  Score=74.32  Aligned_cols=89  Identities=17%  Similarity=0.191  Sum_probs=65.9

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +.+|+..+|+.++         |.  ....++++++.. ++|+||||+.+|+.+|+++|+.+ 
T Consensus       182 ~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~---------~~--~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v-  247 (287)
T 3a1c_A          182 VGMITGDNWRSAEAIS-RELNLDLVIAEVL---------PH--QKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGI-  247 (287)
T ss_dssp             EEEECSSCHHHHHHHH-HHHTCSEEECSCC---------TT--CHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEE-
T ss_pred             EEEEeCCCHHHHHHHH-HHhCCceeeeecC---------hH--HHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeE-
Confidence            4799999999888766 7889998887654         11  226788899988 99999999999999999999984 


Q ss_pred             EecCCCCcccccccccEEE--eccccc
Q 023972           81 AVPSLPKQTHRYTAADEVI--NSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii--~~l~e~  105 (274)
                      .+...  .......++.++  .++.++
T Consensus       248 ~~~~~--~~~~~~~ad~v~~~~~~~~l  272 (287)
T 3a1c_A          248 AVGSG--SDVAVESGDIVLIRDDLRDV  272 (287)
T ss_dssp             EECCC--SCCSSCCSSEEESSSCTHHH
T ss_pred             EeCCC--CHHHHhhCCEEEeCCCHHHH
Confidence            44322  112223456777  666553

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.09  E-value=1.5e-07  Score=77.77  Aligned_cols=75  Identities=12%  Similarity=0.068  Sum_probs=66.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||+.+.++...+ +.+++..+|+.+++.+++...|   +.|.+.++++|.++++||+|+|+..++.++.++|+.+
T Consensus        73 i~I~T~~~~~~a~~vl-~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A           73 CVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             EEEECSSCHHHHHHHH-HHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred             EEEEcCCCHHHHHHHH-HHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence            5899999999999766 8889999999999998876544   5678889999999999999999999999999999884

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=97.98  E-value=6.4e-08  Score=80.28  Aligned_cols=84  Identities=12%  Similarity=0.181  Sum_probs=64.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCC-CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh----HHHHH-H
Q 023972            1 MALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG----VVAGK-A   74 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~-~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d----i~aA~-~   74 (274)
                      ++|+||+++..+...+ +++|+.+ +|+                  ..++++++++|++|+||||+..|    +++|+ +
T Consensus        95 ~~ivT~~~~~~~~~~l-~~~~l~~~~f~------------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~  155 (197)
T 1q92_A           95 VFICTSPIKMFKYCPY-EKYAWVEKYFG------------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPT  155 (197)
T ss_dssp             EEEEECCCSCCSSHHH-HHHHHHHHHHC------------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSS
T ss_pred             EEEEeCCccchHHHHH-HHhchHHHhch------------------HHHHHHhccCCccEEEECcccccCCchhhhcccC
Confidence            4799999887776656 7778887 886                  45778899999999999999998    99999 9


Q ss_pred             cCCEEEEecCCCCcccccccccEEEeccc
Q 023972           75 AGMEVVAVPSLPKQTHRYTAADEVINSLL  103 (274)
Q Consensus        75 aGi~vi~V~~~~~~~~~iSss~~ii~~l~  103 (274)
                      +|+.++++...............++.++.
T Consensus       156 aG~~~i~~~~~~~~~~~~~~~~~~v~~~~  184 (197)
T 1q92_A          156 PSWEHVLFTACHNQHLQLQPPRRRLHSWA  184 (197)
T ss_dssp             CSSEEEEECCTTTTTCCCCTTCEEECCTT
T ss_pred             CCceEEEecCcccccccccccchhhhhHH
Confidence            99999999875443322222224677774

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=97.97  E-value=3.5e-08  Score=81.56  Aligned_cols=85  Identities=11%  Similarity=0.122  Sum_probs=63.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh----HHHHH-Hc
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG----VVAGK-AA   75 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d----i~aA~-~a   75 (274)
                      ++|+||+++..+...+ +++|+   ||.+++++              ++++++++|++|++|||+..|    +.+|+ ++
T Consensus        93 ~~ivT~~~~~~~~~~l-~~~gl---f~~i~~~~--------------~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~a  154 (193)
T 2i7d_A           93 VFICTSPLLKYHHCVG-EKYRW---VEQHLGPQ--------------FVERIILTRDKTVVLGDLLIDDKDTVRGQEETP  154 (193)
T ss_dssp             EEEEECCCSSCTTTHH-HHHHH---HHHHHCHH--------------HHTTEEECSCGGGBCCSEEEESSSCCCSSCSSC
T ss_pred             EEEEeCCChhhHHHHH-HHhCc---hhhhcCHH--------------HHHHcCCCcccEEEECCchhhCcHHHhhccccc
Confidence            4799999888777666 77787   88776642              678899999999999999998    99999 99


Q ss_pred             CCEEEEecCCCCcccccccccEEEeccc
Q 023972           76 GMEVVAVPSLPKQTHRYTAADEVINSLL  103 (274)
Q Consensus        76 Gi~vi~V~~~~~~~~~iSss~~ii~~l~  103 (274)
                      |+.++++...............+++++.
T Consensus       155 G~~~i~~~~~~~~~~~~~~~~~~v~~~~  182 (193)
T 2i7d_A          155 SWEHILFTCCHNRHLVLPPTRRRLLSWS  182 (193)
T ss_dssp             SSEEEEECCGGGTTCCCCTTSCEECSTT
T ss_pred             ccceEEEEeccCcccccccchHHHhhHH
Confidence            9999999764332222111112566663

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.97  E-value=9.5e-07  Score=71.80  Aligned_cols=94  Identities=20%  Similarity=0.086  Sum_probs=68.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCC-CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEV-RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~-~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||+....+.. + +.+|+..+|+.+.+.++. ...+|.+.....+++++  +|++++++||+.+|+.+|+.+|+.+
T Consensus        98 ~~i~t~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v  173 (201)
T 4ap9_A           98 VVLISGSFEEVLEP-F-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGI  173 (201)
T ss_dssp             EEEEEEEETTTSGG-G-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEE
T ss_pred             EEEEeCCcHHHHHH-H-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceE
Confidence            47899988877664 4 778888887776655532 22466666666777777  8899999999999999999999985


Q ss_pred             EEecCCCCcccccccccEEEeccccc
Q 023972           80 VAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                       ++.....      .++.++.++.++
T Consensus       174 -~~~~~~~------~ad~v~~~~~el  192 (201)
T 4ap9_A          174 -AVGREIP------GADLLVKDLKEL  192 (201)
T ss_dssp             -EESSCCT------TCSEEESSHHHH
T ss_pred             -EECCCCc------cccEEEccHHHH
Confidence             4433222      456788877664

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.94  E-value=7.6e-06  Score=66.64  Aligned_cols=67  Identities=15%  Similarity=0.047  Sum_probs=53.2

Q ss_pred             CEEEcCCChHHHHHHHHH--HcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISY--QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~--~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.  ..+...+ +  .+|+. +    +.+     .++.|+.+..++++++++|++++++||+.+|+.+++.+|+.
T Consensus        55 ~~I~Tg~--~~~~~~l-~~l~lgi~-~----~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~  121 (168)
T 3ewi_A           55 VRLISER--ACSKQTL-SALKLDCK-T----EVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLS  121 (168)
T ss_dssp             EEEECSS--CCCHHHH-HTTCCCCC-E----ECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEE
T ss_pred             EEEEeCc--HHHHHHH-HHhCCCcE-E----EEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCE
Confidence            4799999  4455445 6  45553 2    221     35778999999999999999999999999999999999998


Q ss_pred             EE
Q 023972           79 VV   80 (274)
Q Consensus        79 vi   80 (274)
                      ++
T Consensus       122 ~a  123 (168)
T 3ewi_A          122 AV  123 (168)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=97.84  E-value=1.8e-06  Score=74.26  Aligned_cols=67  Identities=12%  Similarity=0.135  Sum_probs=52.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||.++..+...+ +++|+.++|+.+++.+.....||.|+.            -++++|||+.+|+.+++.+|+.+.
T Consensus       163 ~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~~~~k~~~~k~~~~~------------~~~~~vGD~~nDi~~~~~Ag~~va  229 (280)
T 3skx_A          163 CMMLTGDNRFVAKWVA-EELGLDDYFAEVLPHEKAEKVKEVQQK------------YVTAMVGDGVNDAPALAQADVGIA  229 (280)
T ss_dssp             EEEECSSCHHHHHHHH-HHHTCSEEECSCCGGGHHHHHHHHHTT------------SCEEEEECTTTTHHHHHHSSEEEE
T ss_pred             EEEEeCCCHHHHHHHH-HHcCChhHhHhcCHHHHHHHHHHHHhc------------CCEEEEeCCchhHHHHHhCCceEE
Confidence            4799999999988766 888999999988876543333333332            288999999999999999997443

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=97.75  E-value=1.2e-05  Score=70.21  Aligned_cols=72  Identities=15%  Similarity=0.112  Sum_probs=57.9

Q ss_pred             hHHHHHHHHHHcCCCCCCcEE----------EecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            9 RATIESKISYQHGWNESFSVI----------VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         9 ~~~~~~~l~~~~gl~~~Fd~v----------~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ...+...+ +..|+..+|+.+          .+.+.....++.++.+..++++++++|++|+++||+.+|+.+++.+|+.
T Consensus       171 ~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~  249 (289)
T 3gyg_A          171 LLAIEKIC-EEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG  249 (289)
T ss_dssp             HHHHHHHH-HHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE
T ss_pred             HHHHHHHH-HHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE
Confidence            34444444 667887777655          5566667788999999999999999999999999999999999999966


Q ss_pred             EEE
Q 023972           79 VVA   81 (274)
Q Consensus        79 vi~   81 (274)
                      +++
T Consensus       250 ~~~  252 (289)
T 3gyg_A          250 YLL  252 (289)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            543

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=97.64  E-value=8.1e-05  Score=70.85  Aligned_cols=82  Identities=21%  Similarity=0.230  Sum_probs=64.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcC-------------CCCCCcEEEecCCCCCCCCCHHH-----------------------
Q 023972            1 MALASNSHRATIESKISYQHG-------------WNESFSVIVGSDEVRTGKPSPDI-----------------------   44 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~g-------------l~~~Fd~v~~~~~~~~~KP~pe~-----------------------   44 (274)
                      +.|+||++...+...+...+|             +.++||.|++..    .||..-.                       
T Consensus       264 lfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A----~KP~FF~~~~pfr~Vd~~tg~l~~~~~~~~  339 (555)
T 2jc9_A          264 VFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDA----RKPLFFGEGTVLRQVDTKTGKLKIGTYTGP  339 (555)
T ss_dssp             EEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESC----CTTGGGTTCCCEEEEETTTTEECSSCCCSC
T ss_pred             EEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeC----CCCCcccCCCcceEeecCCCcccccccccc
Confidence            468999999999977744336             568999988754    3443222                       


Q ss_pred             -----------HHHHHHHhCCCCCcEEEEecCHh-hHHHHH-HcCCEEEEecCCC
Q 023972           45 -----------FLEAAKRLNMEPSSSLVIEDSVI-GVVAGK-AAGMEVVAVPSLP   86 (274)
Q Consensus        45 -----------f~~~l~~l~v~p~~~vvvgD~~~-di~aA~-~aGi~vi~V~~~~   86 (274)
                                 +..+++.+|+.+.++++|||..+ |+..++ .+|++++.|-+..
T Consensus       340 l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPEL  394 (555)
T 2jc9_A          340 LQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPEL  394 (555)
T ss_dssp             CCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTTH
T ss_pred             ccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEech
Confidence                       46788888999999999999999 898886 8999999998753

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.62  E-value=5.9e-05  Score=68.57  Aligned_cols=70  Identities=14%  Similarity=0.165  Sum_probs=53.6

Q ss_pred             CCCCCCHHHHHHHHHHh----------------------C-----CCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCC
Q 023972           36 RTGKPSPDIFLEAAKRL----------------------N-----MEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPK   87 (274)
Q Consensus        36 ~~~KP~pe~f~~~l~~l----------------------~-----v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~   87 (274)
                      ..+||+|.+|..+++.+                      +     .++++++||||+.. |+.+|+++|+.+++|.++..
T Consensus       243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~  322 (352)
T 3kc2_A          243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY  322 (352)
T ss_dssp             ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC
T ss_pred             EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC
Confidence            47899999999876554                      2     25699999999996 99999999999999988643


Q ss_pred             cccc---cccccEEEeccccc
Q 023972           88 QTHR---YTAADEVINSLLDL  105 (274)
Q Consensus        88 ~~~~---iSss~~ii~~l~e~  105 (274)
                      ....   ...++.+++++.++
T Consensus       323 ~~~~~~~~~~pd~vi~~l~el  343 (352)
T 3kc2_A          323 NEGDDLKECKPTLIVNDVFDA  343 (352)
T ss_dssp             CTTCCCTTCCCSEECSSHHHH
T ss_pred             CcccccccCCCCEEECCHHHH
Confidence            3221   23466788877664

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.49  E-value=0.0002  Score=60.41  Aligned_cols=95  Identities=18%  Similarity=0.126  Sum_probs=66.3

Q ss_pred             EEEc-CCChHHHHHHHHHHcCCCCCCcEEEecC----CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            2 ALAS-NSHRATIESKISYQHGWNESFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         2 aIvS-n~~~~~~~~~l~~~~gl~~~Fd~v~~~~----~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++++ +.++..+...+ +.++  .+|+.+ ++.    .....+|.+..+..+++++++++++++++||+.+|+.+++.+|
T Consensus       114 ~~~~~~~~~~~~~~~~-~~~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag  189 (231)
T 1wr8_A          114 VIMRETINVETVREII-NELN--LNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVG  189 (231)
T ss_dssp             EECTTTSCHHHHHHHH-HHTT--CSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSS
T ss_pred             EEECCCCCHHHHHHHH-HhcC--CcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcC
Confidence            3445 55666666544 5544  567776 432    2457889999999999999999999999999999999999999


Q ss_pred             CEEEEecCCCCcccccccccEEEeccc
Q 023972           77 MEVVAVPSLPKQTHRYTAADEVINSLL  103 (274)
Q Consensus        77 i~vi~V~~~~~~~~~iSss~~ii~~l~  103 (274)
                      +. +.+....  ......++.++.+..
T Consensus       190 ~~-v~~~~~~--~~~~~~a~~v~~~~~  213 (231)
T 1wr8_A          190 YK-VAVAQAP--KILKENADYVTKKEY  213 (231)
T ss_dssp             EE-EECTTSC--HHHHTTCSEECSSCH
T ss_pred             Ce-EEecCCC--HHHHhhCCEEecCCC
Confidence            98 4454432  111223456665544

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=97.38  E-value=0.00028  Score=60.97  Aligned_cols=59  Identities=15%  Similarity=0.103  Sum_probs=49.8

Q ss_pred             CCCCCcEEEecC----CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           22 WNESFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        22 l~~~Fd~v~~~~----~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      +..+|+.+.+..    -....++.+..+..+++++++++++++++||+.+|+.+++.+|+.+.
T Consensus       169 ~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va  231 (271)
T 1rlm_A          169 LDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA  231 (271)
T ss_dssp             TTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred             cCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE
Confidence            556787776652    34567888999999999999999999999999999999999998654

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=97.29  E-value=0.00017  Score=62.67  Aligned_cols=79  Identities=10%  Similarity=0.045  Sum_probs=56.7

Q ss_pred             CEEEcCCC---hHHHHHHHHHHcCCC--CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHH--
Q 023972            1 MALASNSH---RATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK--   73 (274)
Q Consensus         1 laIvSn~~---~~~~~~~l~~~~gl~--~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~--   73 (274)
                      ++|+||.+   +..+...| +.+|+.  .+|+.+++.++.  .||.+.  ..++ ..+.  ..++||||+..|+.+|.  
T Consensus       120 i~iaTnr~~~~~~~~~~~L-~~~Gl~~v~~~~vi~~~~~~--~K~~~~--~~~~-~~~~--~~~l~VGDs~~Di~aA~~~  191 (258)
T 2i33_A          120 IYYISNRKTNQLDATIKNL-ERVGAPQATKEHILLQDPKE--KGKEKR--RELV-SQTH--DIVLFFGDNLSDFTGFDGK  191 (258)
T ss_dssp             EEEEEEEEGGGHHHHHHHH-HHHTCSSCSTTTEEEECTTC--CSSHHH--HHHH-HHHE--EEEEEEESSGGGSTTCSSC
T ss_pred             EEEEcCCchhHHHHHHHHH-HHcCCCcCCCceEEECCCCC--CCcHHH--HHHH-HhCC--CceEEeCCCHHHhcccccC
Confidence            47999988   55566556 778998  788888887753  466553  2222 3343  45889999999998882  


Q ss_pred             -----H---------cCCEEEEecCCCC
Q 023972           74 -----A---------AGMEVVAVPSLPK   87 (274)
Q Consensus        74 -----~---------aGi~vi~V~~~~~   87 (274)
                           +         +|++++.++....
T Consensus       192 ~~~~r~a~v~~~~~~aG~~~i~lpn~~y  219 (258)
T 2i33_A          192 SVKDRNQAVTDSKAQFGEKFIIFPNPMY  219 (258)
T ss_dssp             CHHHHHHHHHHTGGGBTTTEEECCCCSS
T ss_pred             CHHHHHHHHHHHHHHhcCceEECCCCCc
Confidence                 3         8999999987643

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.29  E-value=0.00044  Score=55.75  Aligned_cols=80  Identities=8%  Similarity=0.037  Sum_probs=54.9

Q ss_pred             CEEEcCC---ChH--HHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc
Q 023972            1 MALASNS---HRA--TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA   75 (274)
Q Consensus         1 laIvSn~---~~~--~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a   75 (274)
                      ++|+||+   ++.  .....|.+++++..+|+.++++++.               ++    .+|++|||+..|++  ..+
T Consensus        87 ~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------~l----~~~l~ieDs~~~i~--~aa  145 (180)
T 3bwv_A           87 IYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN---------------II----LADYLIDDNPKQLE--IFE  145 (180)
T ss_dssp             EEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG---------------GB----CCSEEEESCHHHHH--HCS
T ss_pred             EEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC---------------ee----cccEEecCCcchHH--HhC
Confidence            5899998   322  2233454556777888999988762               12    67899999999985  458


Q ss_pred             CCEEEEecCCCCcccccccccEEEeccccc
Q 023972           76 GMEVVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        76 Gi~vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      | .++++++.....   ..++.+++++.++
T Consensus       146 G-~~i~~~~~~~~~---~~~~~~i~~~~el  171 (180)
T 3bwv_A          146 G-KSIMFTASHNVY---EHRFERVSGWRDV  171 (180)
T ss_dssp             S-EEEEECCGGGTT---CCSSEEECSHHHH
T ss_pred             C-CeEEeCCCcccC---CCCceecCCHHHH
Confidence            9 999998643221   3455778877664

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=96.86  E-value=0.0018  Score=55.20  Aligned_cols=77  Identities=10%  Similarity=0.133  Sum_probs=55.5

Q ss_pred             CCcEEEecC------CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCcccccccccEE
Q 023972           25 SFSVIVGSD------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV   98 (274)
Q Consensus        25 ~Fd~v~~~~------~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~~~~iSss~~i   98 (274)
                      .|+.+.+..      -....++.+.....+++++|+++++++++||+.+|+.+++.+|+.+..-+.   .......++.+
T Consensus       179 ~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na---~~~~k~~A~~v  255 (274)
T 3fzq_A          179 KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNS---HQQLKDIATSI  255 (274)
T ss_dssp             GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTS---CHHHHHHCSEE
T ss_pred             ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCc---cHHHHHhhhhe
Confidence            366655543      345677888999999999999999999999999999999999966554222   22222345567


Q ss_pred             Eecccc
Q 023972           99 INSLLD  104 (274)
Q Consensus        99 i~~l~e  104 (274)
                      ..+..+
T Consensus       256 ~~~~~e  261 (274)
T 3fzq_A          256 CEDIFD  261 (274)
T ss_dssp             ECCGGG
T ss_pred             eCCCch
Confidence            665543

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=96.56  E-value=0.0046  Score=53.01  Aligned_cols=60  Identities=18%  Similarity=0.134  Sum_probs=47.4

Q ss_pred             CCCCCcEEEecC----CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972           22 WNESFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus        22 l~~~Fd~v~~~~----~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      +...|+.+.+..    -.....+.+..+..+++++|+++++++++||+.+|+.+++.+|+.+..
T Consensus       175 ~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam  238 (279)
T 4dw8_A          175 LQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM  238 (279)
T ss_dssp             TTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             hcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence            334566666543    244566778999999999999999999999999999999999965433

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=96.36  E-value=0.0035  Score=53.49  Aligned_cols=67  Identities=13%  Similarity=0.126  Sum_probs=50.0

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCcccccccccEEEecccc
Q 023972           35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  104 (274)
Q Consensus        35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e  104 (274)
                      ....+|.+..+..+++++++++++++++||+.+|+.+++.+|+.+.. ...  .......++.+..+..+
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~--~~~~~~~a~~v~~~~~~  248 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQA--KEDVKAAADYVTAPIDE  248 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTS--CHHHHHHSSEECCCGGG
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCc--cHHHHhhCCEEeccCch
Confidence            45778999999999999999999999999999999999999986543 221  11112334466555543

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=96.13  E-value=0.0084  Score=51.80  Aligned_cols=58  Identities=12%  Similarity=0.147  Sum_probs=45.1

Q ss_pred             CCCcEEEecCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972           24 ESFSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus        24 ~~Fd~v~~~~~----~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      +.++.+.+...    .....+.+.....+++++|+++++++++||+.+|+.+++.+|+.+..
T Consensus       191 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam  252 (283)
T 3dao_A          191 KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV  252 (283)
T ss_dssp             TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc
Confidence            34555555442    33455567888889999999999999999999999999999966544

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.02  E-value=0.0078  Score=51.86  Aligned_cols=58  Identities=19%  Similarity=0.142  Sum_probs=45.4

Q ss_pred             CCCcEEEecC----CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972           24 ESFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus        24 ~~Fd~v~~~~----~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      ..+..+.+..    -.....+.+.....+++++|+++++++++||+.+|+.+++.+|+.+..
T Consensus       182 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam  243 (290)
T 3dnp_A          182 PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM  243 (290)
T ss_dssp             TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe
Confidence            3455555432    234556677888889999999999999999999999999999976544

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=95.94  E-value=0.013  Score=50.67  Aligned_cols=44  Identities=18%  Similarity=0.151  Sum_probs=38.0

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ...+.+.....+++.+|+++++++++||+.+|+.+++.+|+.+.
T Consensus       206 ~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vA  249 (285)
T 3pgv_A          206 GGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCI  249 (285)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEE
Confidence            34456788888999999999999999999999999999996653

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=95.93  E-value=0.017  Score=50.42  Aligned_cols=60  Identities=12%  Similarity=-0.001  Sum_probs=45.6

Q ss_pred             CCC-CCcEEEecCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972           22 WNE-SFSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus        22 l~~-~Fd~v~~~~~----~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      +.+ .|+.+.+...    .....+.+.....+++++|+++++++++||+.+|+.+++.+|+.+..
T Consensus       205 ~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam  269 (304)
T 3l7y_A          205 KTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM  269 (304)
T ss_dssp             TTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC
T ss_pred             cCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc
Confidence            444 4666555432    23445567788889999999999999999999999999999966443

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=95.81  E-value=0.0024  Score=54.80  Aligned_cols=41  Identities=17%  Similarity=0.213  Sum_probs=34.6

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ..+.....+++++|+++++++++||+.+|+.+++.+|+.+.
T Consensus       197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va  237 (279)
T 3mpo_A          197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVA  237 (279)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECB
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceee
Confidence            36788888999999999999999999999999999996543

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=95.21  E-value=0.067  Score=50.09  Aligned_cols=85  Identities=14%  Similarity=0.160  Sum_probs=57.5

Q ss_pred             CEEEcCCChHHHHHHHHHHc--------CCCCCCcEEEecCCC-----------------C-------CCCCC---HHHH
Q 023972            1 MALASNSHRATIESKISYQH--------GWNESFSVIVGSDEV-----------------R-------TGKPS---PDIF   45 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~--------gl~~~Fd~v~~~~~~-----------------~-------~~KP~---pe~f   45 (274)
                      +.++||++-.++...+.-.+        .+.++||.|++...-                 +       ..+|.   ....
T Consensus       205 lFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l~~~~~~~~~~vY~gGn~  284 (470)
T 4g63_A          205 IFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTMTNVHGPIVPGVYQGGNA  284 (470)
T ss_dssp             EEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCCEEECCSSCCSEEEEECCH
T ss_pred             EEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCcccccccccCCceeecCcH
Confidence            36899999999987775545        577999999986420                 0       00110   0111


Q ss_pred             HHHHHHhCCCCCcEEEEecCHh-hHHHHH-HcCCEEEEecCC
Q 023972           46 LEAAKRLNMEPSSSLVIEDSVI-GVVAGK-AAGMEVVAVPSL   85 (274)
Q Consensus        46 ~~~l~~l~v~p~~~vvvgD~~~-di~aA~-~aGi~vi~V~~~   85 (274)
                      ....+.+|..-.+++++||+.+ |+..++ ..|+++++|-+.
T Consensus       285 ~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          285 KKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             HHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             HHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence            2234456777789999999999 766554 679999988664

>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}

Probab=95.14  E-value=0.031  Score=43.63  Aligned_cols=69  Identities=7%  Similarity=0.000  Sum_probs=36.6

Q ss_pred             CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH----HHHHHcCCEEEEecCCCCcccccccccEEEe
Q 023972           25 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV----VAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  100 (274)
Q Consensus        25 ~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di----~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~  100 (274)
                      ++|.++..        +|+.|.+.++++++  +.++++.|+.||.    +.+.+.|+.+..++....++..+||+ .|++
T Consensus        65 ~vd~v~~~--------~~~~f~~~~~~l~~--~~iv~G~d~~f~~~~l~~~~~~~g~~v~vv~~~~~~~~~iSST-~IR~  133 (143)
T 3glv_A           65 VVDRAILG--------HEGDMMKTVIEVKP--DIITLGYDQKFDEAELQSKINKLGITVKIVRISKYDGQLNSSS-SVRK  133 (143)
T ss_dssp             TCSEEEEC--------CTTCHHHHHHHHCC--SEEEECTTCHHHHHHHHHHHHHHTCCCEEEECCCCC------------
T ss_pred             CCCEEEEc--------CchhHHHHHHhcCC--CEEEECCCCCCCHHHHHHHHHHcCCeEEEEEeeccCCCcCCHH-HHHH
Confidence            56777663        23447777778866  5666667888875    34567898887777765556668885 5655


Q ss_pred             cccc
Q 023972          101 SLLD  104 (274)
Q Consensus       101 ~l~e  104 (274)
                      .+.+
T Consensus       134 ~i~~  137 (143)
T 3glv_A          134 KIME  137 (143)
T ss_dssp             ----
T ss_pred             HHHH
Confidence            5544

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=95.07  E-value=0.026  Score=47.85  Aligned_cols=45  Identities=20%  Similarity=0.127  Sum_probs=38.5

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      ...+.+.....+++++|+++++++++||+.+|+.+++.+|+.+..
T Consensus       191 ~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam  235 (268)
T 3r4c_A          191 AGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM  235 (268)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             CCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe
Confidence            344556788889999999999999999999999999999976543

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=95.05  E-value=0.034  Score=46.99  Aligned_cols=60  Identities=12%  Similarity=0.078  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCcccccccccEEEecccc
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  104 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e  104 (274)
                      +..+..+++.+|+++++++++||+.+|+.+++.+|+.++. ...  .......++.+..+..+
T Consensus       185 ~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na--~~~~k~~A~~v~~~~~~  244 (258)
T 2pq0_A          185 AEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNA--HEEVKRVADFVTKPVDK  244 (258)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTC--CHHHHHTCSEEECCGGG
T ss_pred             HHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCC--cHHHHHhCCEEeCCCCc
Confidence            4557778899999999999999999999999999997764 322  11222335566665543

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=94.76  E-value=0.015  Score=49.40  Aligned_cols=45  Identities=9%  Similarity=-0.071  Sum_probs=39.5

Q ss_pred             CCCHHHHHHHHHHhCCCC--CcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972           39 KPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAVP   83 (274)
Q Consensus        39 KP~pe~f~~~l~~l~v~p--~~~vvvgD~~~di~aA~~aGi~vi~V~   83 (274)
                      ++.+.....+++++++++  ++++++||+.+|+.+++.+|+.++.-+
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n  221 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGR  221 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSS
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCC
Confidence            677888989999999998  999999999999999999998754433

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=94.42  E-value=0.037  Score=47.35  Aligned_cols=44  Identities=16%  Similarity=0.157  Sum_probs=38.0

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ...+.+..+..+++++++++++++++||+.+|+.+++.+|+.+.
T Consensus       187 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~  230 (268)
T 1nf2_A          187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA  230 (268)
T ss_dssp             TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE
T ss_pred             CCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEE
Confidence            34455678888999999999999999999999999999998553

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=93.92  E-value=0.0055  Score=51.21  Aligned_cols=76  Identities=9%  Similarity=0.003  Sum_probs=59.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCC-CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~-~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|.|++.+.++...+ +.++.. .+|+..+..+.+...   +..|++.+..+|.++++||+|+|+........+.|+.+
T Consensus        77 ivI~Tas~~~ya~~vl-~~LDp~~~~f~~rl~R~~c~~~---~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I  152 (204)
T 3qle_A           77 IVLFSSNYMMYSDKIA-EKLDPIHAFVSYNLFKEHCVYK---DGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPM  152 (204)
T ss_dssp             EEEECSSCHHHHHHHH-HHTSTTCSSEEEEECGGGSEEE---TTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEEC
T ss_pred             EEEEcCCcHHHHHHHH-HHhCCCCCeEEEEEEecceeEE---CCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEe
Confidence            4799999999999777 888887 589988887765431   23477788899999999999999999876655666554


Q ss_pred             E
Q 023972           80 V   80 (274)
Q Consensus        80 i   80 (274)
                      .
T Consensus       153 ~  153 (204)
T 3qle_A          153 E  153 (204)
T ss_dssp             C
T ss_pred             e
Confidence            3

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=93.78  E-value=0.089  Score=45.34  Aligned_cols=44  Identities=25%  Similarity=0.237  Sum_probs=37.3

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972           40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~   84 (274)
                      ..+..+..+++.+++++++++++||+.+|+.+++.+|+. +++..
T Consensus       216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~~  259 (288)
T 1nrw_A          216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGN  259 (288)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EECTT
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcE-EEEcC
Confidence            345677788899999999999999999999999999994 45544

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=92.65  E-value=0.12  Score=44.45  Aligned_cols=44  Identities=23%  Similarity=0.194  Sum_probs=37.1

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972           39 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP   83 (274)
Q Consensus        39 KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~   83 (274)
                      -+.+.....+++++++++++++++||+.+|+.+++.+|+. +.+.
T Consensus       197 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~  240 (282)
T 1rkq_A          197 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVG-VAVD  240 (282)
T ss_dssp             CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECT
T ss_pred             CCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcE-EEec
Confidence            3456777788899999999999999999999999999984 4443

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=92.03  E-value=0.14  Score=42.79  Aligned_cols=46  Identities=15%  Similarity=0.029  Sum_probs=38.2

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP   83 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~   83 (274)
                      ...+.+.....+++++++++++++++||+.+|+.+++.+|+.+ .+.
T Consensus       150 ~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~v-a~~  195 (227)
T 1l6r_A          150 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA-CPA  195 (227)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEE-ECT
T ss_pred             CCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceE-Eec
Confidence            3355667777788999999999999999999999999999864 443

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=91.97  E-value=0.13  Score=43.27  Aligned_cols=45  Identities=24%  Similarity=0.166  Sum_probs=37.8

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV   82 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V   82 (274)
                      ..-+.+.....+++.+++++++++++||+.+|+.+.+.+|+. +.+
T Consensus       159 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~  203 (244)
T 1s2o_A          159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIV  203 (244)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EEC
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEE
Confidence            344566788888999999999999999999999999998875 444

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=91.63  E-value=0.17  Score=44.21  Aligned_cols=46  Identities=17%  Similarity=0.100  Sum_probs=38.3

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972           38 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        38 ~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~   84 (274)
                      .-+.+.....+++.+++++++++++||+.+|+.+++.+|+.+ .+..
T Consensus       222 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~n  267 (301)
T 2b30_A          222 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSF-AVAN  267 (301)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEE-ECTT
T ss_pred             CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-EEcC
Confidence            334567788888999999999999999999999999999864 4443

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=89.94  E-value=2.2  Score=36.44  Aligned_cols=77  Identities=17%  Similarity=0.199  Sum_probs=61.0

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCCCCc--EEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            2 ALASNSHRATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~~Fd--~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      .+||+.+-.....++ =.+||..+|.  .|+++-.++    ...+|.++.++.|. ....++|||..---++|+..++++
T Consensus       180 VLVTs~qLVPaLaK~-LLygL~~~fpieNIYSa~kiG----KesCFerI~~RFG~-k~~yvvIGDG~eEe~AAk~~n~PF  253 (274)
T 3geb_A          180 VLVTTTQLIPALAKV-LLYGLGSVFPIENIYSATKTG----KESCFERIMQRFGR-KAVYVVIGDGVEEEQGAKKHNMPF  253 (274)
T ss_dssp             EEEESSCHHHHHHHH-HHTTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHCT-TSEEEEEESSHHHHHHHHHTTCCE
T ss_pred             EEEecCchHHHHHHH-HHhhcccceecccccchhhcC----HHHHHHHHHHHhCC-CceEEEECCCHHHHHHHHHcCCCe
Confidence            367877766665555 3569999985  689887754    34799999999984 367888899999999999999999


Q ss_pred             EEecC
Q 023972           80 VAVPS   84 (274)
Q Consensus        80 i~V~~   84 (274)
                      .-|..
T Consensus       254 wrI~~  258 (274)
T 3geb_A          254 WRISC  258 (274)
T ss_dssp             EECCS
T ss_pred             EEeec
Confidence            88864

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=89.82  E-value=0.3  Score=42.10  Aligned_cols=78  Identities=15%  Similarity=0.253  Sum_probs=51.5

Q ss_pred             CEEEcCCCh----HHHHHHHHHHcCCCCCCc-EEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHH----
Q 023972            1 MALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA----   71 (274)
Q Consensus         1 laIvSn~~~----~~~~~~l~~~~gl~~~Fd-~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~a----   71 (274)
                      ++|+||.+.    ..+...| +.+|+..+++ .++...+    ++....-...+.+.+.  .-++++||...|+..    
T Consensus       120 i~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~gy--~iv~~iGD~~~Dl~~~~~~  192 (260)
T 3pct_A          120 MFFVSNRRDDVEKAGTVDDM-KRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDMGY--DIVLFVGDNLNDFGDATYK  192 (260)
T ss_dssp             EEEEEEEETTTSHHHHHHHH-HHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTTTC--EEEEEEESSGGGGCGGGTT
T ss_pred             EEEEeCCCccccHHHHHHHH-HHcCcCccccceeEecCC----CCChHHHHHHHHhcCC--CEEEEECCChHHcCccccc
Confidence            478998754    4666667 7789988775 4444332    2333555566666565  458888999988554    


Q ss_pred             -------------HHHcCCEEEEecCC
Q 023972           72 -------------GKAAGMEVVAVPSL   85 (274)
Q Consensus        72 -------------A~~aGi~vi~V~~~   85 (274)
                                   +...|.+.++++..
T Consensus       193 ~~~~~r~a~v~~~~~~fG~~~ivlPNp  219 (260)
T 3pct_A          193 KSNAERRDFVAKNSKAFGKKFIVLPNT  219 (260)
T ss_dssp             CCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence                         23468888888664

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=89.02  E-value=0.42  Score=41.23  Aligned_cols=78  Identities=9%  Similarity=0.120  Sum_probs=49.9

Q ss_pred             CEEEcCCCh----HHHHHHHHHHcCCCCCCc-EEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHH----
Q 023972            1 MALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA----   71 (274)
Q Consensus         1 laIvSn~~~----~~~~~~l~~~~gl~~~Fd-~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~a----   71 (274)
                      ++|+||.+.    ..+...| +.+|+..+++ .++...+ .   +....-...+.+.|.  .-+++|||...|+..    
T Consensus       120 i~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~-~---~~K~~~r~~l~~~Gy--~iv~~vGD~~~Dl~~~~~~  192 (262)
T 3ocu_A          120 VFYVTNRKDSTEKSGTIDDM-KRLGFNGVEESAFYLKKD-K---SAKAARFAEIEKQGY--EIVLYVGDNLDDFGNTVYG  192 (262)
T ss_dssp             EEEEEEEETTTTHHHHHHHH-HHHTCSCCSGGGEEEESS-C---SCCHHHHHHHHHTTE--EEEEEEESSGGGGCSTTTT
T ss_pred             EEEEeCCCccchHHHHHHHH-HHcCcCcccccceeccCC-C---CChHHHHHHHHhcCC--CEEEEECCChHHhcccccc
Confidence            478998754    4666667 7789987773 4454433 1   222334445555555  358888999988653    


Q ss_pred             -------------HHHcCCEEEEecCC
Q 023972           72 -------------GKAAGMEVVAVPSL   85 (274)
Q Consensus        72 -------------A~~aGi~vi~V~~~   85 (274)
                                   +...|.+.+++|..
T Consensus       193 ~~~~~r~a~v~~~~~~fG~~~ivlPNp  219 (262)
T 3ocu_A          193 KLNADRRAFVDQNQGKFGKTFIMLPNA  219 (262)
T ss_dssp             CCHHHHHHHHHHTGGGBTTTEEECCCS
T ss_pred             CCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence                         23468888888764

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=87.78  E-value=0.49  Score=39.76  Aligned_cols=41  Identities=10%  Similarity=-0.145  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHhCC-CCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972           42 PDIFLEAAKRLNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVP   83 (274)
Q Consensus        42 pe~f~~~l~~l~v-~p~~~vvvgD~~~di~aA~~aGi~vi~V~   83 (274)
                      +.....+++.+++ ++++++++||+.+|+.+.+.+|+.+ .+.
T Consensus       181 g~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~v-a~g  222 (249)
T 2zos_A          181 GKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVF-IVG  222 (249)
T ss_dssp             HHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEE-EES
T ss_pred             HHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEE-EeC
Confidence            4566667888887 8899999999999999999999864 443

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=86.38  E-value=1.2  Score=43.36  Aligned_cols=66  Identities=12%  Similarity=0.144  Sum_probs=45.0

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      +.++|+.+...+.... +.+|+..+|..+           .|+.=...++++.-. ++++|+||..+|..+.+.+|+-+
T Consensus       476 v~~~TGd~~~~a~~ia-~~lgi~~~~~~~-----------~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgi  541 (645)
T 3j08_A          476 VGMITGDNWRSAEAIS-RELNLDLVIAEV-----------LPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGI  541 (645)
T ss_dssp             EEEECSSCHHHHHHHH-HHHTCSEEECSC-----------CTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEE
T ss_pred             EEEEeCCCHHHHHHHH-HHcCCCEEEEeC-----------CHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEE
Confidence            3688999998887644 788886433211           122223344455444 78999999999999999999554

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=84.90  E-value=0.42  Score=43.38  Aligned_cols=61  Identities=15%  Similarity=0.140  Sum_probs=47.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCC-CCc-EEEecCCCCCCCCCHHHHHHHHHHh-CCCCCcEEEEecCHhh
Q 023972            1 MALASNSHRATIESKISYQHGWNE-SFS-VIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIEDSVIG   68 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~-~Fd-~v~~~~~~~~~KP~pe~f~~~l~~l-~v~p~~~vvvgD~~~d   68 (274)
                      ++|.|++.+.++...+ +.++... +|+ .+++.++.+.      .|.+.+.++ +.+++++|+|+|+..-
T Consensus        93 ivI~Tas~~~yA~~vl-~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl~~viiiDd~~~~  156 (372)
T 3ef0_A           93 LHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDTSMVVVIDDRGDV  156 (372)
T ss_dssp             EEEECSSCHHHHHHHH-HHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCCTTEEEEESCSGG
T ss_pred             EEEEeCCcHHHHHHHH-HHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCCceEEEEeCCHHH
Confidence            4799999999999766 8888887 787 6777766432      345566666 8899999999999753

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=83.35  E-value=0.76  Score=39.20  Aligned_cols=46  Identities=11%  Similarity=-0.030  Sum_probs=37.6

Q ss_pred             CCCHHHHHHHHHHhC-CCCCc--EEEEecCHhhHHHHHHcCCEEEEecCC
Q 023972           39 KPSPDIFLEAAKRLN-MEPSS--SLVIEDSVIGVVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        39 KP~pe~f~~~l~~l~-v~p~~--~vvvgD~~~di~aA~~aGi~vi~V~~~   85 (274)
                      -+.+.....+++.++ +++++  ++++||+.+|+.+.+.+|+. +.+...
T Consensus       188 ~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~  236 (275)
T 1xvi_A          188 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGL  236 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCC
T ss_pred             CCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCC
Confidence            345677777888888 88889  99999999999999999986 555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	274
d1nb9a_	147	b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapie	2e-44
d1n08a_	154	b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Sc	4e-43
d1mrza1	130	b.43.5.1 (A:159-288) Riboflavin kinase domain of b	6e-30
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	5e-13
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	3e-10
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	9e-10
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	3e-09
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	5e-09
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	2e-08
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	2e-08
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	3e-08
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	2e-07
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	2e-07
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	1e-06
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	2e-06
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	2e-06
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	2e-06
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	1e-05
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	3e-05
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	4e-05
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	2e-04
d2fpwa1	161	c.108.1.19 (A:3-163) Histidine biosynthesis bifunc	0.001
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	0.001
d2ah5a1	210	c.108.1.6 (A:1-210) predicted phosphatase SP0104 {	0.003
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	0.004

>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 147

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 2e-44
 Identities = 67/141 (47%), Positives = 101/141 (71%)

Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63

Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
           IGWNPY+ N +K++E  ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I  D +
Sbjct: 64  IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123

Query: 247 VAERALDLPLYSKYRDDPYLK 267
            A++ L+LP Y K ++D + +
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQ 144

>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 154

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  142 bits (358), Expect = 4e-43
 Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 8/162 (4%)

Query: 106 RPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP 165
           RPE  G     + ++      P    G VV G GRGSK LGIPTAN+S +   ++L    
Sbjct: 1   RPEIVG----PEKVQ---SPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRD 53

Query: 166 SGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYI 225
           SGVYFG+  +  + V+ MVMS+GWNPY+ N  ++ E  L+    EDFY+E + ++++GYI
Sbjct: 54  SGVYFGY-AMVQKRVFPMVMSVGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYI 112

Query: 226 RPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 267
           RPE N+  L+ LI  IH D +VA  ++D P YS Y+ DP+ K
Sbjct: 113 RPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK 154

>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Length = 130

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

 Score =  107 bits (268), Expect = 6e-30
 Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 3/132 (2%)

Query: 128 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSI 187
           + I G V K    G K LG PTAN+       V  +   GVY     L        VM++
Sbjct: 2   FEIEGIVHKDREFGRK-LGFPTANIDRGNEKLV--DLKRGVYLVRVHLPDGKKKFGVMNV 58

Query: 188 GWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKV 247
           G+ P   +A        + +F+ D Y + L L ++ ++R E  F S+E L A I +D K 
Sbjct: 59  GFRPTVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKS 118

Query: 248 AERALDLPLYSK 259
           A   +D  + SK
Sbjct: 119 ARNMIDDIINSK 130

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (157), Expect = 5e-13
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 2/107 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + S+      +    +    +    V    D     K   + + + A  +    ++ L
Sbjct: 146 VYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNIL 205

Query: 61  VIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 105
            + D      A + A + V  V  P     T        +I S  +L
Sbjct: 206 FLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 57.5 bits (138), Expect = 3e-10
 Identities = 22/138 (15%), Positives = 41/138 (29%), Gaps = 33/138 (23%)

Query: 1   MALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTG-----------KPSPDIFLE 47
           + +A+               G    F    I  + +V              KP+P  ++ 
Sbjct: 234 LGIATGRPYTETV-VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292

Query: 48  AAKRLNME--------------PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--- 90
           A    N +                   ++ DS+  +++ +  G   +   +  K      
Sbjct: 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAG 352

Query: 91  --RYTAADEVINSLLDLR 106
                 AD VIN L +LR
Sbjct: 353 ELEAHHADYVINHLGELR 370

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 54.8 bits (130), Expect = 9e-10
 Identities = 13/84 (15%), Positives = 30/84 (35%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           + + SN++R              ++   I  S ++   KP   I+    +     PS ++
Sbjct: 103 VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 162

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPS 84
             +D+   +      G+  + V  
Sbjct: 163 FFDDNADNIEGANQLGITSILVKD 186

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 53.7 bits (127), Expect = 3e-09
 Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 43  DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINS 101
            ++L+ A +L ++P + + +EDSV G++A KAA M  + VP+   Q   R+  A+  ++S
Sbjct: 148 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 207

Query: 102 LLDLRPE 108
           L +L  +
Sbjct: 208 LTELTAK 214

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (126), Expect = 5e-09
 Identities = 13/66 (19%), Positives = 28/66 (42%)

Query: 19  QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78
               ++ F  ++ S +V   KP P I+      L  +P+  + ++D    +   +  GM 
Sbjct: 137 MCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMV 196

Query: 79  VVAVPS 84
            + V +
Sbjct: 197 TILVHN 202

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (122), Expect = 2e-08
 Identities = 16/77 (20%), Positives = 27/77 (35%)

Query: 8   HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 67
            RA  +            F  ++ S +V   KP P I+      L   PS  + ++D   
Sbjct: 128 DRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGA 187

Query: 68  GVVAGKAAGMEVVAVPS 84
            +   +  GM  + V  
Sbjct: 188 NLKPARDLGMVTILVQD 204

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 51.3 bits (121), Expect = 2e-08
 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
            A+ SN     ++  +    G  +SF  ++  D  R  KP PD +    + L + P+  L
Sbjct: 110 RAILSNGAPDMLQ-ALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168

Query: 61  VIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 114
            +  +   V   K  G  V  V      +L ++    T A   +   L +R E +   P
Sbjct: 169 FVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.0 bits (120), Expect = 3e-08
 Identities = 9/87 (10%), Positives = 21/87 (24%), Gaps = 1/87 (1%)

Query: 19  QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78
               N         +     K     +    + +  + S  L + D+ + + A    G+ 
Sbjct: 140 SLDLNSYIDGYFDIN-TSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIA 198

Query: 79  VVAVPSLPKQTHRYTAADEVINSLLDL 105
                             +V  +   L
Sbjct: 199 TGLASRPGNAPVPDGQKYQVYKNFETL 225

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 48.7 bits (114), Expect = 2e-07
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 16  ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 75
           +  +      F  I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +
Sbjct: 122 LLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDS 181

Query: 76  GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 108
           G   + V               ++        E
Sbjct: 182 GALPIGVGR----PEDLGDDIVIVPDTSHYTLE 210

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 48.3 bits (113), Expect = 2e-07
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 6/104 (5%)

Query: 8   HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 67
           HR  +         +                KP PDIFL  A +  + P   +V+EDSV 
Sbjct: 110 HRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVH 169

Query: 68  GVVAGKAAGMEVVAVPS------LPKQTHRYTAADEVINSLLDL 105
           G+   +AAGM V+                    A+ VI+ + DL
Sbjct: 170 GIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL 213

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 45.9 bits (107), Expect = 1e-06
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 40  PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 84
           P+P+  L   ++  +     LVI D  I + AG+AAG++     S
Sbjct: 135 PNPESMLYLREKYQISSG--LVIGDRPIDIEAGQAAGLDTHLFTS 177

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.8 bits (105), Expect = 2e-06
 Identities = 11/112 (9%), Positives = 29/112 (25%), Gaps = 12/112 (10%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
           +A AS +      +++       + F                  F     +  +  S  +
Sbjct: 65  VAAASRTSEIQGANQLLELFDLGKYFIQREIYP-----GSKVTHFERLHHKTGVPFSQMV 119

Query: 61  VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGL 112
             +D    ++     G+  + +          +    +   L      + GL
Sbjct: 120 FFDDENRNIIDVGRLGVTCIHIR------DGMS-LQTLTQGLETFAKAQAGL 164

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 45.6 bits (106), Expect = 2e-06
 Identities = 7/65 (10%), Positives = 21/65 (32%), Gaps = 6/65 (9%)

Query: 43  DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 102
           +       +  +   ++  I D  + V   + +G++ +               +  I +L
Sbjct: 141 EAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF------LESTYEGNHRIQAL 194

Query: 103 LDLRP 107
            D+  
Sbjct: 195 ADISR 199

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 45.6 bits (106), Expect = 2e-06
 Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 1/89 (1%)

Query: 18  YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77
              G  + F  ++  D V+  KP   ++  A + L ++ S+ L +  +       +  G 
Sbjct: 128 SHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGF 187

Query: 78  EVVAVPSLPKQTHRY-TAADEVINSLLDL 105
               +              D  + SL  +
Sbjct: 188 PTCWINRTGNVFEEMGQTPDWEVTSLRAV 216

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 43.0 bits (99), Expect = 1e-05
 Identities = 8/44 (18%), Positives = 13/44 (29%)

Query: 62  IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           I DSV      +AA ++             +          LD+
Sbjct: 160 IGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI 203

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.9 bits (97), Expect = 3e-05
 Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 33  DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 92
            +                 L+      ++I DSV  V A K + +   A   L  +    
Sbjct: 138 CKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL-CFARDYLLNECREQ 196

Query: 93  TAADEVINSLLDLRPEKWGLPPFQDWIE 120
                      ++R E   +   Q+W++
Sbjct: 197 NLNHLPYQDFYEIRKEIENVKEVQEWLQ 224

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 41.7 bits (96), Expect = 4e-05
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 1/83 (1%)

Query: 1   MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEPSSS 59
           +   +   R  ++               +V  D+V  G+P P +  + A  L     +  
Sbjct: 118 IGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM 177

Query: 60  LVIEDSVIGVVAGKAAGMEVVAV 82
           + + D+V  +  G+ AGM  V V
Sbjct: 178 IKVGDTVSDMKEGRNAGMWTVGV 200

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 39.5 bits (90), Expect = 2e-04
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 2/90 (2%)

Query: 18  YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77
              G +  FS ++G   +   KP P  F     +  + P   L + DS   + A  +AG 
Sbjct: 130 TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGC 189

Query: 78  EVVAVPS--LPKQTHRYTAADEVINSLLDL 105
            VV +            +  D + +   D+
Sbjct: 190 AVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 10/65 (15%), Positives = 20/65 (30%)

Query: 18  YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77
                       + +DE    KP   +         M+ ++S VI D    +   +  G+
Sbjct: 83  GVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGI 142

Query: 78  EVVAV 82
             +  
Sbjct: 143 NGLRY 147

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 6/56 (10%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 51  RLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
           +  ++   ++ + D+ +      K  GM  + +    ++   +   D +++ L ++
Sbjct: 167 KAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 36.0 bits (81), Expect = 0.003
 Identities = 7/56 (12%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 52  LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 105
             + P  +++I D+   ++  +  G++ +A+      +        D + +  L++
Sbjct: 150 HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 35.5 bits (80), Expect = 0.004
 Identities = 7/58 (12%), Positives = 18/58 (31%), Gaps = 2/58 (3%)

Query: 50  KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 105
              N  PS  ++I D+   +   +      +AV +     +         +  +  + 
Sbjct: 162 TGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 219

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	274
d1n08a_	154	Riboflavin kinase {Fission yeast (Schizosaccharomy	100.0
d1nb9a_	147	Riboflavin kinase {Human (Homo sapiens) [TaxId: 96	100.0
d1mrza1	130	Riboflavin kinase domain of bifunctional FAD synth	100.0
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.63
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.61
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.59
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.59
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.55
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.55
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.52
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.5
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.48
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.46
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.46
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.45
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.41
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.35
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.35
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.34
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.33
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.31
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.31
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.18
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.02
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.93
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.92
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	98.91
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.87
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.86
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	98.78
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.59
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.97
d1mrza2	157	FMN adenylyltransferase domain of bifunctional FAD	97.8
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	97.17
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	97.13
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.07
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	96.75
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	94.71
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	94.53
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	93.64
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	91.38
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	91.15
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	88.35
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	88.27
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	87.5
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	87.49
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	85.0
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	82.96
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	81.92
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	81.14
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	80.5

>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.8e-50  Score=324.33  Aligned_cols=140  Identities=47%  Similarity=0.891  Sum_probs=127.3

Q ss_pred             CceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEc
Q 023972          126 EPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLL  205 (274)
Q Consensus       126 rpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~  205 (274)
                      .||.++|+|+||++||+|+||||||||.++...+++..+..|||++|+.+++ .+|+||+|||+||||++.+.++|||||
T Consensus        14 yPy~i~G~Vv~G~~~G~R~LGfPTANl~~~~~~~l~~~P~~GVYa~~v~i~~-~~y~~v~niG~rPTf~~~~~~~Evhil   92 (154)
T d1n08a_          14 YPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQK-RVFPMVMSVGWNPYYKNKLRSAEVHLI   92 (154)
T ss_dssp             CCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTSCSEEEEEEEEETT-EEEEEEEEEEECTTCSSCCEEEEEEET
T ss_pred             CCEEEEEEEEeCCccCCcccCcCCeeecCccccccccccccceEEEEEeeec-eeEEEEEeeccchhcccccceEEEEEe
Confidence            4589999999999999658999999998765434432224899999999975 899999999999999988889999999


Q ss_pred             ccCCc-ccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCc
Q 023972          206 HEFDE-DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK  267 (274)
Q Consensus       206 ~df~~-dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~  267 (274)
                      | |++ ||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+++.|..|+.|.||+
T Consensus        93 d-f~~~dlYg~~i~V~~~~~iR~e~kF~s~e~L~~qI~~D~~~ar~~L~~~~~~~~~~~~~~~  154 (154)
T d1n08a_          93 E-RQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK  154 (154)
T ss_dssp             T-CCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCGGGC
T ss_pred             c-ccchhhcCEEEEEEEeeeccCCcccCCHHHHHHHHHHHHHHHHHHHcChhHHhhccCcccC
Confidence            6 986 999999999999999999999999999999999999999999999999999999996

>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-51  Score=325.01  Aligned_cols=142  Identities=49%  Similarity=0.960  Sum_probs=131.5

Q ss_pred             ceeEeEEEEeccCCCccccCccceecCCCCCCCCCC-CCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEc
Q 023972          127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLS-EHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLL  205 (274)
Q Consensus       127 py~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p-~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~  205 (274)
                      ||.++|+|+||.++|+|+||||||||.++.. +++| .+..|||++++.+.++.+|+||+|||.||||++...++|+|+|
T Consensus         4 Py~i~G~Vv~G~~~G~r~LGfPTANl~~~~~-~~lp~~~~~GVY~~~v~i~~~~~y~gi~niG~rPTf~~~~~~~E~h~l   82 (147)
T d1nb9a_           4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVV-DNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETHIM   82 (147)
T ss_dssp             SEEEEEECBCCSSSCGGGGTCCCEECCHHHH-HTSCTTSCSEEEEEEEEETTCCCEEEEEEEEECTTSSSCCEEEEEEES
T ss_pred             CEEEEEEEEeCCccCCCccCcCCcCCcCchh-hccccccccCceEEEEEecCCCccceEEEeccccccccccceEEEEEe
Confidence            8999999999999996589999999987653 4454 2458999999999767899999999999999988889999999


Q ss_pred             ccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCccc
Q 023972          206 HEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKIT  269 (274)
Q Consensus       206 ~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~~~  269 (274)
                      +||++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.+.+..++.|.||+.|
T Consensus        83 ~dF~~dlYG~~i~V~~~~~iR~e~KF~s~~~L~~qI~~Di~~ar~~l~~~~~~~~~~~~~~~~~  146 (147)
T d1nb9a_          83 HTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQVS  146 (147)
T ss_dssp             SCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGGCHHHHTT
T ss_pred             ccCCCceeeeEEEEEEEeEecCCcCcCCHHHHHHHHHHHHHHHHHHHCChhhhhhccCchhccC
Confidence            7799999999999999999999999999999999999999999999999999999999999986

>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.4e-46  Score=291.33  Aligned_cols=123  Identities=31%  Similarity=0.473  Sum_probs=93.4

Q ss_pred             eeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecC-CCceeeeeEcc
Q 023972          128 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDN-AEKTIEPWLLH  206 (274)
Q Consensus       128 y~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~-~~~~~E~~i~~  206 (274)
                      |.++|+|+||+++|| +||||||||.+++. .++|+ ..|||++|+.+.++.+|+||+|||+||||++ ....+|+||+|
T Consensus         2 y~i~G~V~~G~~~Gr-~lGfPTANl~~~~~-~~~~p-~~GVY~~~v~~~~~~~~~~v~~iG~~PTf~~~~~~~~E~hi~d   78 (130)
T d1mrza1           2 FEIEGIVHKDREFGR-KLGFPTANIDRGNE-KLVDL-KRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYILD   78 (130)
T ss_dssp             CEEEEEC------------CCCEECBCCSS-CBCCC-CSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEETT
T ss_pred             EEEEEEEEeCCcccc-ccCCCCCCcccccc-ccccc-ccceeEEEEEEeeccccceEEEEEeecccccccceeEEEEEcc
Confidence            789999999999997 69999999998774 45542 4899999999866688999999999999975 56789999996


Q ss_pred             cCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCC
Q 023972          207 EFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDL  254 (274)
Q Consensus       207 df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~  254 (274)
                       |++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|++
T Consensus        79 -f~~dlYg~~i~v~f~~~lR~e~kF~s~~eL~~qI~~Di~~ar~~l~~  125 (130)
T d1mrza1          79 -FEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMIDD  125 (130)
T ss_dssp             -CCSCCTTCEEEEEEEEEEECCCC----CCHHHHHHHHHHHHHHHHHH
T ss_pred             -cCcccCCCEEEEEEEEEeCCCcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence             99999999999999999999999999999999999999999999964

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=7.1e-16  Score=128.00  Aligned_cols=105  Identities=30%  Similarity=0.531  Sum_probs=93.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++|+.++|+.++++++++.+||+|+.|..++++++++|++++||||+..|+.+|+++|+.++
T Consensus       107 ~~i~T~~~~~~~~~~l-~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i  185 (218)
T d1te2a_         107 VGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSI  185 (218)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred             cccccccccccccccc-ccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEE
Confidence            5899999999998777 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcc-cccccccEEEecccccc
Q 023972           81 AVPSLPKQT-HRYTAADEVINSLLDLR  106 (274)
Q Consensus        81 ~V~~~~~~~-~~iSss~~ii~~l~e~~  106 (274)
                      +|+...... .....++.+++++.++.
T Consensus       186 ~v~~~~~~~~~~~~~a~~~i~~l~el~  212 (218)
T d1te2a_         186 VVPAPEAQNDPRFVLANVKLSSLTELT  212 (218)
T ss_dssp             ECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred             EECCCCCccchhhcCCCEEECChhhCC
Confidence            997754332 33466778999998863

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.61  E-value=8.6e-16  Score=126.90  Aligned_cols=104  Identities=20%  Similarity=0.284  Sum_probs=93.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+.+..+...+ +++|+..+||.++++++....||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus       100 ~~ivT~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i  178 (207)
T d2hdoa1         100 LGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFG  178 (207)
T ss_dssp             EEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             cccccccccccccccc-ccccccccccccccccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEE
Confidence            4799999999998766 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccccccccEEEeccccc
Q 023972           81 AVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++.++.........++++++++.++
T Consensus       179 ~v~~g~~~~~~~~~~~~~i~~l~dl  203 (207)
T d2hdoa1         179 LAVWGMDPNADHQKVAHRFQKPLDI  203 (207)
T ss_dssp             EEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred             EEecCCCChhHhhhcCcEeCCHHHH
Confidence            9987765555555567888887764

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.59  E-value=2.8e-15  Score=124.18  Aligned_cols=104  Identities=17%  Similarity=0.265  Sum_probs=90.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||+........+ ++.++..+||.++++++.+..||+|+.|..+++++|++|++|+||||+..|+.+|+++|++++
T Consensus       112 ~~i~tn~~~~~~~~~~-~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v  190 (220)
T d1zrna_         112 LAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTC  190 (220)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred             EEeecchHHHHHHHHH-hhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEE
Confidence            4799999999888766 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCC-cccccccccEEEeccccc
Q 023972           81 AVPSLPK-QTHRYTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~-~~~~iSss~~ii~~l~e~  105 (274)
                      ++..... .......++.+++++.++
T Consensus       191 ~v~r~~~~~~~~~~~~d~~i~~l~el  216 (220)
T d1zrna_         191 WINRTGNVFEEMGQTPDWEVTSLRAV  216 (220)
T ss_dssp             EECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             EEcCCCCCcccccCCCCEEECCHHHH
Confidence            9975432 222334567889988764

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.59  E-value=1.5e-15  Score=127.43  Aligned_cols=104  Identities=18%  Similarity=0.285  Sum_probs=92.8

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||+++..+...+ +.+|+.++||.++++++.+..||+|+.|..+++++|++|++|++|||+. .|+++|+++|+.+
T Consensus       118 i~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~  196 (230)
T d1x42a1         118 VGMITDSDTEYLMAHL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTS  196 (230)
T ss_dssp             EEEEESSCHHHHHHHH-HHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEE
T ss_pred             eeeeeccccccchhhh-cccccccccccccccccccccchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEE
Confidence            4799999999988777 8889999999999999999999999999999999999999999999986 5999999999999


Q ss_pred             EEecCCCCcccccccccEEEeccccc
Q 023972           80 VAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      ++++...........++.+++++.++
T Consensus       197 v~v~~~~~~~~~~~~~d~~i~~l~el  222 (230)
T d1x42a1         197 ILLDRKGEKREFWDKCDFIVSDLREV  222 (230)
T ss_dssp             EEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred             EEECCCCCCcccccCCCEEECCHHHH
Confidence            99987655555555678999998875

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.55  E-value=1.2e-14  Score=122.02  Aligned_cols=84  Identities=25%  Similarity=0.397  Sum_probs=78.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||++...+...+ ++.++..+||.++++++++..||+|++|..+++++|++|++|++|||+..|+.+|+++|++++
T Consensus       110 ~~v~s~~~~~~~~~~~-~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv  188 (245)
T d1qq5a_         110 RAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA  188 (245)
T ss_dssp             EEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred             eeEEeccchHHHHHHH-hhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEE
Confidence            4789999999888766 788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      +|...
T Consensus       189 ~v~r~  193 (245)
T d1qq5a_         189 RVARL  193 (245)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            99753

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.55  E-value=1.7e-14  Score=119.38  Aligned_cols=104  Identities=20%  Similarity=0.325  Sum_probs=93.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+++..+...+ +++||.++|+.++++++.+..||.|+.|..++++++++|+++++|||+..|+.+|+++|+.++
T Consensus       114 ~~i~tn~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i  192 (224)
T d2hsza1         114 LAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVV  192 (224)
T ss_dssp             EEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             ccccccccHHHHHHHH-HhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEE
Confidence            4799999999998777 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      ++.++......  ...++.+++++.++
T Consensus       193 ~v~~g~~~~~~l~~~~~d~~v~~l~dL  219 (224)
T d2hsza1         193 GLTYGYNYNIPIAQSKPDWIFDDFADI  219 (224)
T ss_dssp             EESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             EEeCCCCCcchhhhcCCCEEECCHHHH
Confidence            99986544332  34577899998875

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.52  E-value=9e-15  Score=124.46  Aligned_cols=85  Identities=21%  Similarity=0.298  Sum_probs=78.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCC-cEEEecCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHcCCE
Q 023972            1 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~F-d~v~~~~~~~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      ++|+||.++..+...+ +++|+.++| |.+++++++...||+|+.|..+++++++.| ++||||||+..|+++|+++|+.
T Consensus       118 i~i~Tn~~~~~~~~~l-~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~  196 (257)
T d1swva_         118 IGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMW  196 (257)
T ss_dssp             EEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred             eeecCCCchhhHHHHH-HHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCE
Confidence            4899999999998777 788999987 889999999999999999999999999964 8999999999999999999999


Q ss_pred             EEEecCCC
Q 023972           79 VVAVPSLP   86 (274)
Q Consensus        79 vi~V~~~~   86 (274)
                      +|+|.++.
T Consensus       197 ti~v~~G~  204 (257)
T d1swva_         197 TVGVILGS  204 (257)
T ss_dssp             EEEECTTC
T ss_pred             EEEEccCC
Confidence            99998874

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=5.1e-14  Score=118.74  Aligned_cols=105  Identities=23%  Similarity=0.391  Sum_probs=88.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v   79 (274)
                      ++|+||++...+...+ +++|+.++||.++++++.+..||+|++|..++++++++|++|++|||+. .|+.+|+++|+.+
T Consensus       127 l~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~  205 (247)
T d2gfha1         127 LLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKA  205 (247)
T ss_dssp             EEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSE
T ss_pred             eEEeecccchhhhhhh-hhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeE
Confidence            4799999999888777 7889999999999999999999999999999999999999999999996 6999999999975


Q ss_pred             E-EecCCCC-cccccccccEEEecccccc
Q 023972           80 V-AVPSLPK-QTHRYTAADEVINSLLDLR  106 (274)
Q Consensus        80 i-~V~~~~~-~~~~iSss~~ii~~l~e~~  106 (274)
                      + ++..... .......++.++.++.++.
T Consensus       206 ~~~~~~~~~~~~~~~~~p~~~i~~l~eL~  234 (247)
T d2gfha1         206 TVWINKSGRVPLTSSPMPHYMVSSVLELP  234 (247)
T ss_dssp             EEEECTTCCCCSSCCCCCSEEESSGGGHH
T ss_pred             EEEECCCCCCcccccCCCCEEECCHHHHH
Confidence            4 5544322 2223445678999988754

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.48  E-value=4.4e-14  Score=116.00  Aligned_cols=83  Identities=14%  Similarity=0.195  Sum_probs=76.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+.+. +...| +++|+.+|||.++++++....||+|++|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus       101 ~~v~Sn~~~~-~~~~l-~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i  178 (204)
T d2go7a1         101 QFIYTHKGNN-AFTIL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI  178 (204)
T ss_dssp             EEEECSSCTH-HHHHH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             hhhhcccchh-hhhhh-hhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEE
Confidence            5899998875 44456 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      ++.++
T Consensus       179 ~v~~~  183 (204)
T d2go7a1         179 NFLES  183 (204)
T ss_dssp             ESSCC
T ss_pred             EEcCC
Confidence            99765

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.46  E-value=5.9e-14  Score=115.49  Aligned_cols=102  Identities=14%  Similarity=0.239  Sum_probs=88.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++...+...+ +++|+..+||.++++++.  .||+|+.|..++++++++|++++||||+..|+.+|+++|++++
T Consensus       102 ~~i~t~~~~~~~~~~l-~~~gl~~~fd~v~~~~~~--~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i  178 (210)
T d2ah5a1         102 LYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL  178 (210)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECSS--CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             hhhcccccchhhhHHH-Hhhccccccccccccccc--ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEE
Confidence            4789999999998766 899999999999999885  5788899999999999999999999999999999999999999


Q ss_pred             EecCCCCcccc--cccccEEEeccccc
Q 023972           81 AVPSLPKQTHR--YTAADEVINSLLDL  105 (274)
Q Consensus        81 ~V~~~~~~~~~--iSss~~ii~~l~e~  105 (274)
                      +|.++......  -..|+.+++++.++
T Consensus       179 ~v~~g~~~~~~l~~~~pd~vi~~l~el  205 (210)
T d2ah5a1         179 AITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             EESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             EEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            99876543333  24578899998774

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.46  E-value=9.4e-14  Score=115.94  Aligned_cols=105  Identities=18%  Similarity=0.248  Sum_probs=90.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHh---CCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l---~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++|+||+.+..+...+ +.+|+.++||.++++++....||.|+.+...++.+   +++|++||||||+..|+++|+++|+
T Consensus       111 ~~v~t~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~  189 (228)
T d2hcfa1         111 LGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDA  189 (228)
T ss_dssp             EEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred             ccccCCCcchhhhhhh-hhhcccccccccccccccccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCC
Confidence            4799999999998777 88999999999999999999999999988876666   7899999999999999999999999


Q ss_pred             EEEEecCCCCcccc--cccccEEEecccccc
Q 023972           78 EVVAVPSLPKQTHR--YTAADEVINSLLDLR  106 (274)
Q Consensus        78 ~vi~V~~~~~~~~~--iSss~~ii~~l~e~~  106 (274)
                      .+++|.++......  ...++.+++++.++.
T Consensus       190 ~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~  220 (228)
T d2hcfa1         190 RSIAVATGNFTMEELARHKPGTLFKNFAETD  220 (228)
T ss_dssp             EEEEECCSSSCHHHHHTTCCSEEESCSCCHH
T ss_pred             EEEEEcCCCCCHHHHhhCCCCEEECCHHHHH
Confidence            99999876544332  346789999998753

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=8.6e-14  Score=116.16  Aligned_cols=104  Identities=13%  Similarity=0.099  Sum_probs=84.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEe-cCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVG-SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~-~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      ++|+||+++......+ +.+|+.++|+...+ .++....||+|+.|..++++++++|++|+||||+..|+.+|+++|+++
T Consensus       146 l~i~Tn~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~t  224 (253)
T d1zs9a1         146 VYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHV  224 (253)
T ss_dssp             EEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEE
T ss_pred             eeecCCCcHHHHHHHH-HHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEE
Confidence            4899999999887666 88899999885443 455678999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCccc--ccccccEEEeccccc
Q 023972           80 VAVPSLPKQTH--RYTAADEVINSLLDL  105 (274)
Q Consensus        80 i~V~~~~~~~~--~iSss~~ii~~l~e~  105 (274)
                      ++|........  ....++.++++|.|+
T Consensus       225 i~v~r~g~~~~~~~~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         225 AVVVRPGNAGLTDDEKTYYSLITSFSEL  252 (253)
T ss_dssp             EEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             EEEeCCCCCCCchhhcCCCcEECChHHh
Confidence            99975422221  234445678888764

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.41  E-value=2.6e-13  Score=112.46  Aligned_cols=103  Identities=31%  Similarity=0.490  Sum_probs=86.4

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-C--CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972            2 ALASNSHRATIESKISYQHGWNESFSVIVGS-D--EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME   78 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~--~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~   78 (274)
                      +|+||+....+...+ +++++.++|+.++++ +  .....||+|+.|..++++++++|++|+||||+..|+++|+++|+.
T Consensus       102 ~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~  180 (222)
T d2fdra1         102 CICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMR  180 (222)
T ss_dssp             EEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred             eeeeecchhhhhhhh-cccccccccceeecccccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCE
Confidence            689999999998777 889999999975554 3  256789999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCccc----c--cccccEEEeccccc
Q 023972           79 VVAVPSLPKQTH----R--YTAADEVINSLLDL  105 (274)
Q Consensus        79 vi~V~~~~~~~~----~--iSss~~ii~~l~e~  105 (274)
                      ++++.++.....    .  ...++.+++++.++
T Consensus       181 ~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL  213 (222)
T d2fdra1         181 VIGFTGASHTYPSHADRLTDAGAETVISRMQDL  213 (222)
T ss_dssp             EEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred             EEEEccCCCCCcchHHHHHhCCCCEEECCHHHH
Confidence            999988643221    1  12467899999875

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.35  E-value=1.7e-13  Score=113.01  Aligned_cols=86  Identities=9%  Similarity=0.067  Sum_probs=69.3

Q ss_pred             HHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCcccccccccE
Q 023972           18 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE   97 (274)
Q Consensus        18 ~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~~~~iSss~~   97 (274)
                      ..+|+.++||.|++++.. .+||+|+.|..+++++|++|++|+||||+..|+.+|+++|+++++|............+..
T Consensus       139 ~~~~l~~~Fd~v~~~~~~-~~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~  217 (225)
T d2g80a1         139 DSLDLNSYIDGYFDINTS-GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQ  217 (225)
T ss_dssp             CCBCCGGGCCEEECHHHH-CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSC
T ss_pred             HhcCCccccceeeecccc-CCCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCC
Confidence            456899999999988664 4799999999999999999999999999999999999999999999753322222223335


Q ss_pred             EEecccc
Q 023972           98 VINSLLD  104 (274)
Q Consensus        98 ii~~l~e  104 (274)
                      ++.++.+
T Consensus       218 ~i~~~~e  224 (225)
T d2g80a1         218 VYKNFET  224 (225)
T ss_dssp             EESCSTT
T ss_pred             ccCChhh
Confidence            6777655

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.35  E-value=1.2e-12  Score=106.37  Aligned_cols=80  Identities=29%  Similarity=0.386  Sum_probs=72.6

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||++..... .+ +++++..+||.+++++++...||+|+.|..+++++++  +++|+|||+..|+++|+++|++++
T Consensus        98 ~~i~Sn~~~~~~~-~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i  173 (187)
T d2fi1a1          98 HFLVSHRNDQVLE-IL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTH  173 (187)
T ss_dssp             EEEECSSCTHHHH-HH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEE
T ss_pred             ccccccCccchhh-hh-hhhccccccccccccccccccCCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEE
Confidence            4899999887654 56 7889999999999999999999999999999999987  569999999999999999999999


Q ss_pred             EecC
Q 023972           81 AVPS   84 (274)
Q Consensus        81 ~V~~   84 (274)
                      ++..
T Consensus       174 ~v~~  177 (187)
T d2fi1a1         174 LFTS  177 (187)
T ss_dssp             ECSC
T ss_pred             EECC
Confidence            9975

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=5.8e-14  Score=112.61  Aligned_cols=85  Identities=15%  Similarity=0.202  Sum_probs=75.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||++.......+....++.++||.++++++.+..||+|+.|..++++++++|++|+||||+..|+++|+++|++++
T Consensus       103 ~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti  182 (197)
T d2b0ca1         103 VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSI  182 (197)
T ss_dssp             EEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred             EEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEE
Confidence            36888888777666563334788999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      +|...
T Consensus       183 ~v~~~  187 (197)
T d2b0ca1         183 LVKDK  187 (197)
T ss_dssp             ECCST
T ss_pred             EECCC
Confidence            99764

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.33  E-value=1.8e-12  Score=107.13  Aligned_cols=82  Identities=34%  Similarity=0.457  Sum_probs=73.4

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++++||+...  ...+ +.+|+..+|+.++++++.+.+||+|+.|..++++++++|++||||||+..|+++|+++|++++
T Consensus       110 i~i~s~~~~~--~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i  186 (221)
T d1o08a_         110 IALASASKNG--PFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPI  186 (221)
T ss_dssp             EEECCSCTTH--HHHH-HHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred             eEEEeecchh--hHHH-HhhccccccccccccccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEE
Confidence            3677776543  4445 888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 023972           81 AVPSL   85 (274)
Q Consensus        81 ~V~~~   85 (274)
                      +|.+.
T Consensus       187 ~v~~~  191 (221)
T d1o08a_         187 GVGRP  191 (221)
T ss_dssp             EESCH
T ss_pred             EECCh
Confidence            99763

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=8.9e-13  Score=108.05  Aligned_cols=84  Identities=19%  Similarity=0.263  Sum_probs=71.7

Q ss_pred             CEEEcCCChHHHHH---HHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            1 MALASNSHRATIES---KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         1 laIvSn~~~~~~~~---~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      ++++||........   ......++.++||.++++++.+.+||+|+.|..++++++++|++|+||||+..|+++|+++|+
T Consensus       118 ~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~  197 (225)
T d1zd3a1         118 TAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGM  197 (225)
T ss_dssp             EEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTC
T ss_pred             cccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCC
Confidence            47889875443221   122445788999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecC
Q 023972           78 EVVAVPS   84 (274)
Q Consensus        78 ~vi~V~~   84 (274)
                      +++++..
T Consensus       198 ~ti~v~~  204 (225)
T d1zd3a1         198 VTILVQD  204 (225)
T ss_dssp             EEEECSS
T ss_pred             EEEEECC
Confidence            9999965

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=7.1e-13  Score=109.35  Aligned_cols=84  Identities=17%  Similarity=0.244  Sum_probs=72.2

Q ss_pred             CEEEcCCC----hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            1 MALASNSH----RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         1 laIvSn~~----~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ++++||..    .......+ ...++.+|||.++++++++.+||+|+.|..++++++++|++||||||+..|+++|+++|
T Consensus       116 ~~i~s~~~~~~~~~~~~~~~-~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG  194 (222)
T d1cr6a1         116 TCIVTNNWLDDGDKRDSLAQ-MMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMG  194 (222)
T ss_dssp             EEEEECCCCCCSSSHHHHHH-HHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHT
T ss_pred             eEEeeccccccHHHHHHHHH-HhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcC
Confidence            36788743    22333333 56789999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEecCC
Q 023972           77 MEVVAVPSL   85 (274)
Q Consensus        77 i~vi~V~~~   85 (274)
                      +++++|..+
T Consensus       195 ~~ti~V~~~  203 (222)
T d1cr6a1         195 MVTILVHNT  203 (222)
T ss_dssp             CEEEECCSS
T ss_pred             CEEEEECCc
Confidence            999999764

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=3.7e-11  Score=95.72  Aligned_cols=81  Identities=10%  Similarity=0.020  Sum_probs=71.3

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ++|+||+.+......+++++++..+|+.+.+.     .||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus        65 ~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i  139 (164)
T d1u7pa_          65 VAAASRTSEIQGANQLLELFDLGKYFIQREIY-----PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCI  139 (164)
T ss_dssp             EEEEECCSCHHHHHHHHHHTTCGGGCSEEEES-----SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred             EEEEeccccchhhccchhcccccccceeeecc-----cCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEE
Confidence            48999887765555555889999999988753     5899999999999999999999999999999999999999999


Q ss_pred             EecCCC
Q 023972           81 AVPSLP   86 (274)
Q Consensus        81 ~V~~~~   86 (274)
                      .|.++.
T Consensus       140 ~v~~G~  145 (164)
T d1u7pa_         140 HIRDGM  145 (164)
T ss_dssp             ECSSCC
T ss_pred             EECCCC
Confidence            998864

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.02  E-value=3.8e-11  Score=95.84  Aligned_cols=53  Identities=19%  Similarity=0.231  Sum_probs=45.9

Q ss_pred             CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCC
Q 023972           33 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        33 ~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~   85 (274)
                      +++..+||+|++|.+++++++++|++++||||+..|+++|+++|++++++.+.
T Consensus        98 ~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1          98 DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             GCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             ccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence            56778899999999999999999999999999999999999999999999764

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.93  E-value=9.6e-10  Score=91.18  Aligned_cols=52  Identities=31%  Similarity=0.454  Sum_probs=47.9

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCCC
Q 023972           35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP   86 (274)
Q Consensus        35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~   86 (274)
                      ...+||+|.+|.++++++++++++++||||+..|+++|+++|+.++++..+.
T Consensus       125 ~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~  176 (209)
T d2o2xa1         125 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGE  176 (209)
T ss_dssp             CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCC
T ss_pred             cccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCC
Confidence            3457999999999999999999999999999999999999999999987654

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.92  E-value=1e-09  Score=92.87  Aligned_cols=72  Identities=21%  Similarity=0.324  Sum_probs=60.0

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCCcccc----cccccEEEecccccc
Q 023972           35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLR  106 (274)
Q Consensus        35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~~~~~----iSss~~ii~~l~e~~  106 (274)
                      ...+||+|++|..++++++++|++|+||||+.. |+++|+++|+++++|.++......    ...||.+++++.+++
T Consensus       176 ~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~  252 (253)
T d1wvia_         176 IIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD  252 (253)
T ss_dssp             EECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred             EEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence            335699999999999999999999999999976 999999999999999886433322    123589999998864

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=98.91  E-value=2.2e-09  Score=86.69  Aligned_cols=72  Identities=32%  Similarity=0.357  Sum_probs=59.0

Q ss_pred             CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE-EEEecCCCCcccc-cccccEEEeccccc
Q 023972           34 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHR-YTAADEVINSLLDL  105 (274)
Q Consensus        34 ~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~-vi~V~~~~~~~~~-iSss~~ii~~l~e~  105 (274)
                      +...+||+|.++..+++++++++++++||||+..|+++|+++|+. ++++..+...... ...++.++.++.++
T Consensus       103 ~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl  176 (182)
T d2gmwa1         103 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL  176 (182)
T ss_dssp             CCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred             cccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHH
Confidence            356789999999999999999999999999999999999999995 4677765433222 34577899988774

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=6.1e-10  Score=94.18  Aligned_cols=81  Identities=22%  Similarity=0.334  Sum_probs=64.8

Q ss_pred             CcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCCccccc----ccccEEEe
Q 023972           26 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVIN  100 (274)
Q Consensus        26 Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~~~~~i----Sss~~ii~  100 (274)
                      |+...+.+.....||+|+.|..++++++++|++|+||||+.. |+.+|+++|+++++|.++.......    ..||++++
T Consensus       163 ~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~  242 (250)
T d2c4na1         163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP  242 (250)
T ss_dssp             HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred             HHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEEC
Confidence            333444455567899999999999999999999999999976 9999999999999998874333322    23579999


Q ss_pred             cccccc
Q 023972          101 SLLDLR  106 (274)
Q Consensus       101 ~l~e~~  106 (274)
                      ++.+++
T Consensus       243 sl~eL~  248 (250)
T d2c4na1         243 SVAEID  248 (250)
T ss_dssp             SGGGCC
T ss_pred             CHHHhC
Confidence            998864

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.86  E-value=1.5e-09  Score=97.68  Aligned_cols=106  Identities=20%  Similarity=0.256  Sum_probs=85.1

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcE--EEecCC-----------CCCCCCCHHHHHHHHHHh--------------C
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSV--IVGSDE-----------VRTGKPSPDIFLEAAKRL--------------N   53 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~--v~~~~~-----------~~~~KP~pe~f~~~l~~l--------------~   53 (274)
                      ++|+||.++..+...+ +++|+.++|+.  +++.++           ....||+|+.|..++..+              +
T Consensus       234 v~i~Tg~~~~~a~~il-~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~  312 (380)
T d1qyia_         234 LGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNI  312 (380)
T ss_dssp             EEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTC
T ss_pred             EEEECCCCHHHHHHHH-HHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence            5899999999999777 88999999974  665443           468899999999887543              5


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCccc-----ccccccEEEeccccccc
Q 023972           54 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-----RYTAADEVINSLLDLRP  107 (274)
Q Consensus        54 v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~~~-----~iSss~~ii~~l~e~~~  107 (274)
                      .++++|+|+||+.+|+.+|+++|+.+|+|.++.....     ....++.+++++.++.-
T Consensus       313 ~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~  371 (380)
T d1qyia_         313 VNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRG  371 (380)
T ss_dssp             SCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHH
T ss_pred             CCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHH
Confidence            6788999999999999999999999999988643321     12367899999987633

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.78  E-value=2e-09  Score=90.92  Aligned_cols=77  Identities=22%  Similarity=0.269  Sum_probs=62.5

Q ss_pred             EEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCCcccc----cccccEEEeccc
Q 023972           29 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLL  103 (274)
Q Consensus        29 v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~~~~~----iSss~~ii~~l~  103 (274)
                      +.+.+....+||+|++|..+++++|++|++++||||+.. |+++|+++|+++++|.++......    -..||++++++.
T Consensus       170 ~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~  249 (253)
T d1yv9a1         170 ATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLD  249 (253)
T ss_dssp             HHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGG
T ss_pred             cccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHH
Confidence            344455567899999999999999999999999999976 999999999999999876432221    233689999998


Q ss_pred             cc
Q 023972          104 DL  105 (274)
Q Consensus       104 e~  105 (274)
                      |.
T Consensus       250 e~  251 (253)
T d1yv9a1         250 EW  251 (253)
T ss_dssp             GC
T ss_pred             Hc
Confidence            75

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.59  E-value=1.5e-08  Score=85.57  Aligned_cols=71  Identities=23%  Similarity=0.305  Sum_probs=59.2

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCCcccc----cccccEEEeccccc
Q 023972           35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDL  105 (274)
Q Consensus        35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~~~~~----iSss~~ii~~l~e~  105 (274)
                      ....||+|..|..++++++++|++++||||+.. |+.+|+++|+.+++|.++......    -..||++++++.++
T Consensus       181 ~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL  256 (261)
T d1vjra_         181 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL  256 (261)
T ss_dssp             EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred             cccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence            345799999999999999999999999999965 999999999999999887443322    12357899988774

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.97  E-value=2.1e-06  Score=69.91  Aligned_cols=78  Identities=12%  Similarity=-0.023  Sum_probs=61.5

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcE---EEec----------CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSV---IVGS----------DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI   67 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~---v~~~----------~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~   67 (274)
                      ++|+||+.+..+...| +++|+.++|..   .+..          .....+++.|.....+++++++++.++++|||+..
T Consensus        94 ~~ivS~~~~~~i~~~l-~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~  172 (226)
T d2feaa1          94 FYVISGGMDFFVYPLL-EGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVT  172 (226)
T ss_dssp             EEEEEEEEHHHHHHHH-TTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGG
T ss_pred             cccCCcchhhhHHHHH-HHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHHHHHhcCCCceEEEEeCchh
Confidence            4799999999998766 88888777632   1111          12234577888888999999999999999999999


Q ss_pred             hHHHHHHcCCEE
Q 023972           68 GVVAGKAAGMEV   79 (274)
Q Consensus        68 di~aA~~aGi~v   79 (274)
                      |+.+|+++|+.+
T Consensus       173 Dl~~a~~A~~~~  184 (226)
T d2feaa1         173 DVEAAKLSDLCF  184 (226)
T ss_dssp             GHHHHHTCSEEE
T ss_pred             hHHHHHHCCEEE
Confidence            999999999744

>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: FMN adenylyltransferase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.80  E-value=1.3e-06  Score=68.66  Aligned_cols=76  Identities=20%  Similarity=0.171  Sum_probs=60.4

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh------HHHHHHcCCEEEEecCCCCcccccccccEEEecccccccccc
Q 023972           37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG------VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW  110 (274)
Q Consensus        37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d------i~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e~~~~~~  110 (274)
                      .++.+|+.|++.+. .+  .+.++++.|+.||      .+.-++.|+++..++....++..+||+ .|++.+.++++.. 
T Consensus        76 ~~~ls~~~Fi~~~l-~~--~~~ivvG~Df~FG~~r~G~~~~Lk~~g~~v~~i~~~~~~~~~ISST-~IR~~l~~G~i~~-  150 (157)
T d1mrza2          76 IKDLTPEGFVERYL-SG--VSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSS-LIRNLVQEGRVEE-  150 (157)
T ss_dssp             HTTCCHHHHHHHHC-TT--CCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHH-HHHHHHHTTCTTT-
T ss_pred             HhhhhhhHHHHHHh-hc--CcEEEEecCcccccccccchhhhccceeEEEeeccEeeCCcEEcHH-HHHHHHHcCCHHH-
Confidence            56789999987543 24  4677777999887      455678999999999877777888886 7777777898886 


Q ss_pred             CCCCCCCcccCCCCCC
Q 023972          111 GLPPFQDWIEGTLPSE  126 (274)
Q Consensus       111 ~l~~~~~~~a~~lLgr  126 (274)
                               |+.||||
T Consensus       151 ---------A~~lLGR  157 (157)
T d1mrza2         151 ---------IPAYLGR  157 (157)
T ss_dssp             ---------THHHHSS
T ss_pred             ---------HHHhcCC
Confidence                     9999997

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=97.17  E-value=0.001  Score=49.93  Aligned_cols=60  Identities=15%  Similarity=0.037  Sum_probs=44.0

Q ss_pred             CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcE-EEEecCHhhHHHHHHcCCEEEEecCC
Q 023972           25 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVPSL   85 (274)
Q Consensus        25 ~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~-vvvgD~~~di~aA~~aGi~vi~V~~~   85 (274)
                      .++......+ ...+|++..-...+.++..++.++ +|+||+..|+++|+++|++++.|.++
T Consensus        87 ~~~~~~~~~~-~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1          87 PLVMQCQREQ-GDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             CCSEEEECCT-TCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             cEEEeecccc-cccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            4455555444 445666666666777776655565 56799999999999999999999875

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00028  Score=56.77  Aligned_cols=63  Identities=16%  Similarity=0.267  Sum_probs=50.6

Q ss_pred             HHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC----CCCCcEEEEecCH-----------------hhHHHHHH
Q 023972           16 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN----MEPSSSLVIEDSV-----------------IGVVAGKA   74 (274)
Q Consensus        16 l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~----v~p~~~vvvgD~~-----------------~di~aA~~   74 (274)
                      +.+.++.  .++..+|......+||.|.++..++++++    ++..+++||||..                 .|++.|.+
T Consensus        95 i~~~l~~--~~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N  172 (195)
T d1yj5a1          95 VLEKLGV--PFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN  172 (195)
T ss_dssp             HHHHHTS--CCEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHH
T ss_pred             HHHHcCC--CccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHH
Confidence            3355554  34666777777899999999999998875    7789999999954                 79999999


Q ss_pred             cCCEEE
Q 023972           75 AGMEVV   80 (274)
Q Consensus        75 aGi~vi   80 (274)
                      +|++..
T Consensus       173 ~gikF~  178 (195)
T d1yj5a1         173 VGLPFA  178 (195)
T ss_dssp             HTCCEE
T ss_pred             CCCccc
Confidence            999964

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.07  E-value=0.00054  Score=53.63  Aligned_cols=96  Identities=18%  Similarity=0.159  Sum_probs=68.9

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCCCCcEEEecC----------CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHH
Q 023972            2 ALASNSHRATIESKISYQHGWNESFSVIVGSD----------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA   71 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~----------~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~a   71 (274)
                      .++|+.....+.... ...+...+|......+          ....+++.+......+..+++++.+++++||+.+|+.+
T Consensus        95 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m  173 (210)
T d1j97a_          95 AVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISM  173 (210)
T ss_dssp             EEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHH
T ss_pred             Eeecccccccccchh-hccchhhhhhhhhccccccccccccccccccccccchhhhHHHHhcccccceEEecCCcChHHH
Confidence            567887777777655 6667777665544432          23455667778888889999999999999999999999


Q ss_pred             HHHcCCEEEEecCCCCcccccccccEEEecc
Q 023972           72 GKAAGMEVVAVPSLPKQTHRYTAADEVINSL  102 (274)
Q Consensus        72 A~~aGi~vi~V~~~~~~~~~iSss~~ii~~l  102 (274)
                      ++.+|+.+.. ..  .+ ...+.++.++++.
T Consensus       174 ~~~ag~~va~-na--~~-~lk~~Ad~vi~~~  200 (210)
T d1j97a_         174 FKKAGLKIAF-CA--KP-ILKEKADICIEKR  200 (210)
T ss_dssp             HHHCSEEEEE-SC--CH-HHHTTCSEEECSS
T ss_pred             HHHCCCCEEE-CC--CH-HHHHhCCEEEcCC
Confidence            9999988654 32  12 2234456787754

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00035  Score=56.55  Aligned_cols=99  Identities=11%  Similarity=0.069  Sum_probs=58.2

Q ss_pred             CEEEcCCChHHHHHHHHHHcCCCCCCcEEEe------c--CCCCCCCCC--------HHHHHHHHHHhCCCCCcEEEEec
Q 023972            1 MALASNSHRATIESKISYQHGWNESFSVIVG------S--DEVRTGKPS--------PDIFLEAAKRLNMEPSSSLVIED   64 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~------~--~~~~~~KP~--------pe~f~~~l~~l~v~p~~~vvvgD   64 (274)
                      ++|+|++....+...+ +.+|+..+.  +++      .  .-.+..++.        ......+..  +.++++|+++||
T Consensus       101 ~~ivS~~~~~~v~~i~-~~lgi~~~~--v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~--~~~~~~~~~vGD  175 (217)
T d1nnla_         101 VFLISGGFRSIVEHVA-SKLNIPATN--VFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKE--KFHFKKIIMIGD  175 (217)
T ss_dssp             EEEEEEEEHHHHHHHH-HHTTCCGGG--EEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHH--HHCCSCEEEEES
T ss_pred             EEEECCCchHHHHHHH-HHhCCcccc--eeeeeeeeeehhccccceeeeeeeccchHHHHHHHHHh--ccCccccEEEEe
Confidence            4799999999888655 889997431  111      0  001111221        122222323  345689999999


Q ss_pred             CHhhHHHHHHcCCEEEEecCCCCcccccccccEEEeccccc
Q 023972           65 SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  105 (274)
Q Consensus        65 ~~~di~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e~  105 (274)
                      +.+|+.+++.+|+.+ ++............++.++.++.++
T Consensus       176 s~~Di~~~~~ag~~v-a~~~~~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         176 GATDMEACPPADAFI-GFGGNVIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             SHHHHTTTTTSSEEE-EECSSCCCHHHHHHCSEEESCGGGG
T ss_pred             CHhhHHHHHhCCceE-EECCCHHHHHHHHhCCCEeCCHHHh
Confidence            999999999999865 4432111111122355777777664

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.71  E-value=0.019  Score=45.02  Aligned_cols=45  Identities=18%  Similarity=0.124  Sum_probs=39.4

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ....+.+.....+++++++++.+++++||+.+|+.+.+.+|+.+.
T Consensus       148 ~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~va  192 (230)
T d1wr8a_         148 KPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVA  192 (230)
T ss_dssp             CTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             eCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEE
Confidence            455667788888999999999999999999999999999997643

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=94.53  E-value=0.044  Score=48.93  Aligned_cols=85  Identities=14%  Similarity=0.158  Sum_probs=57.9

Q ss_pred             CEEEcCCChHHHHHHHHHHc--------CCCCCCcEEEecCC-----------------CC-------CCCCC---HHHH
Q 023972            1 MALASNSHRATIESKISYQH--------GWNESFSVIVGSDE-----------------VR-------TGKPS---PDIF   45 (274)
Q Consensus         1 laIvSn~~~~~~~~~l~~~~--------gl~~~Fd~v~~~~~-----------------~~-------~~KP~---pe~f   45 (274)
                      +.++||++-.++...+...+        .+.++||.|++...                 .+       ..|+.   ....
T Consensus       204 lFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l~~~~~~~~~~vY~gGn~  283 (458)
T d2bdea1         204 IFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTMTNVHGPIVPGVYQGGNA  283 (458)
T ss_dssp             EEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCCEEECCSCCCSEEEEECCH
T ss_pred             EEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCccccCCccccCCccccCCH
Confidence            36899999999887775555        67789999998631                 00       00110   0111


Q ss_pred             HHHHHHhCCCCCcEEEEecCHh-hHHHH-HHcCCEEEEecCC
Q 023972           46 LEAAKRLNMEPSSSLVIEDSVI-GVVAG-KAAGMEVVAVPSL   85 (274)
Q Consensus        46 ~~~l~~l~v~p~~~vvvgD~~~-di~aA-~~aGi~vi~V~~~   85 (274)
                      ..+.+.+|..-.+++++||+.+ |+..+ +..|+++++|-+.
T Consensus       284 ~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         284 KKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             HHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             HHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence            2234556777789999999999 76655 5789999988764

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=93.64  E-value=0.078  Score=41.05  Aligned_cols=72  Identities=14%  Similarity=0.135  Sum_probs=50.7

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972            2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      +++|......+.... +.+++..    ++.     ..++........++++++++++++++||..+|+.+-+.+|+.++.
T Consensus        52 ~iis~~~~~~v~~~~-~~l~~~~----~~~-----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap  121 (177)
T d1k1ea_          52 AVLSGRDSPILRRRI-ADLGIKL----FFL-----GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV  121 (177)
T ss_dssp             EEEESCCCHHHHHHH-HHHTCCE----EEE-----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             EEecCCchhHHHHHH-hhhcccc----ccc-----ccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc
Confidence            567776666666555 4555532    222     123344556668899999999999999999999999999987654


Q ss_pred             ec
Q 023972           82 VP   83 (274)
Q Consensus        82 V~   83 (274)
                      -+
T Consensus       122 ~n  123 (177)
T d1k1ea_         122 AD  123 (177)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.38  E-value=0.087  Score=41.42  Aligned_cols=39  Identities=15%  Similarity=-0.017  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ......+++++++++++++++||+.+|+.+.+.+|+.+.
T Consensus       153 ~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~va  191 (225)
T d1l6ra_         153 AFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC  191 (225)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE
T ss_pred             HHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEE
Confidence            445556889999999999999999999999999997653

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.15  E-value=0.078  Score=40.37  Aligned_cols=81  Identities=11%  Similarity=0.009  Sum_probs=50.6

Q ss_pred             EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972            2 ALASNSHRATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM   77 (274)
Q Consensus         2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~----~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi   77 (274)
                      +++|........... ..++...++........    .....+.+..-...++.++.++++++++||+.+|+.+.+.+|+
T Consensus        88 ~~~s~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~  166 (206)
T d1rkua_          88 VILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHA  166 (206)
T ss_dssp             EEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSE
T ss_pred             EEeccCchHHHHHHH-HHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCc
Confidence            345555555555444 56666554433222211    1111222333445677788899999999999999999999998


Q ss_pred             EEEEecC
Q 023972           78 EVVAVPS   84 (274)
Q Consensus        78 ~vi~V~~   84 (274)
                      .+.. +.
T Consensus       167 gIAm-na  172 (206)
T d1rkua_         167 GILF-HA  172 (206)
T ss_dssp             EEEE-SC
T ss_pred             cEEE-CC
Confidence            8755 54

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=88.35  E-value=0.29  Score=39.08  Aligned_cols=40  Identities=20%  Similarity=0.148  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA   81 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~   81 (274)
                      ......+++++|+++++++++||+.+|+.+-+.+|..++.
T Consensus       192 ~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam  231 (269)
T d1rlma_         192 ANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM  231 (269)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC
T ss_pred             HHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe
Confidence            3556667899999999999999999999999999977654

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=88.27  E-value=0.32  Score=38.57  Aligned_cols=74  Identities=14%  Similarity=0.183  Sum_probs=47.7

Q ss_pred             EEEcCCC---hHHHHHHHHHHcCCC--CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972            2 ALASNSH---RATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG   76 (274)
Q Consensus         2 aIvSn~~---~~~~~~~l~~~~gl~--~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG   76 (274)
                      ..+||..   +..+...|.+.+|+.  +.-+.++...+  ..|..-..   .++++++    .+++||...|+.+|.++|
T Consensus       106 fyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~rr~---~Ik~y~I----~l~~GD~l~Df~aA~eag  176 (209)
T d2b82a1         106 FFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNTKSQ---WLQDKNI----RIFYGDSDNDITAARDVG  176 (209)
T ss_dssp             EEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCCSHH---HHHHTTE----EEEEESSHHHHHHHHHTT
T ss_pred             EEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchHHHH---HHHHcCe----EEEecCCHHHHhHHHHcC
Confidence            5678754   344445564557774  33345555443  34444333   3355654    677899999999999999


Q ss_pred             CEEEEecC
Q 023972           77 MEVVAVPS   84 (274)
Q Consensus        77 i~vi~V~~   84 (274)
                      ++.|-+..
T Consensus       177 i~~iRi~r  184 (209)
T d2b82a1         177 ARGIRILR  184 (209)
T ss_dssp             CEEEECCC
T ss_pred             CCceEeec
Confidence            99988844

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=87.50  E-value=0.35  Score=38.81  Aligned_cols=42  Identities=26%  Similarity=0.245  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~   84 (274)
                      ......+++.+|+++++++++||+.+|+.+.+.+|..+ ++..
T Consensus       215 ~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~sv-am~n  256 (285)
T d1nrwa_         215 GQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGV-AMGN  256 (285)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEE-ECTT
T ss_pred             hhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEE-EeCC
Confidence            45666688999999999999999999999999999766 4433

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=87.49  E-value=0.25  Score=38.11  Aligned_cols=44  Identities=14%  Similarity=0.176  Sum_probs=32.8

Q ss_pred             CCCCCHHHHH-HHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           37 TGKPSPDIFL-EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        37 ~~KP~pe~f~-~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ..|-..-..+ +.++++++++.+++++||+.+|+.+-+.+|..++
T Consensus       183 ~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~va  227 (232)
T d1xvia_         183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI  227 (232)
T ss_dssp             CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEE
T ss_pred             chHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEE
Confidence            3444333333 2446789999999999999999999999997553

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=85.00  E-value=0.57  Score=37.24  Aligned_cols=42  Identities=12%  Similarity=0.116  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS   84 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~   84 (274)
                      ......+++++++++++++++||+.+|+.+-+.+|..+ ++..
T Consensus       188 ~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~sv-av~n  229 (260)
T d2rbka1         188 QKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV-AMGQ  229 (260)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTT
T ss_pred             HHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEE-EeCC
Confidence            45566688999999999999999999999999999864 5543

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=82.96  E-value=0.78  Score=36.34  Aligned_cols=37  Identities=22%  Similarity=0.221  Sum_probs=32.7

Q ss_pred             HHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972           43 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV   79 (274)
Q Consensus        43 e~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v   79 (274)
                      .....+++++++++++++++||+.+|+.+.+.+|..+
T Consensus       200 ~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~  236 (271)
T d1rkqa_         200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGV  236 (271)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             cccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEE
Confidence            4666688899999999999999999999999999665

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=81.92  E-value=0.74  Score=36.66  Aligned_cols=59  Identities=19%  Similarity=0.114  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCcccccccccEEEeccc
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL  103 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~  103 (274)
                      ......+++.+++++++++++||+.+|+.+-+.+|..+ .+....  .+....++.+..+-.
T Consensus       192 ~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sv-a~~na~--~~~k~~A~~i~~~~~  250 (267)
T d1nf2a_         192 GKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRV-AMENAI--EKVKEASDIVTLTNN  250 (267)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEE-ECTTSC--HHHHHHCSEECCCTT
T ss_pred             hHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEE-EeCCCC--HHHHHhCCEEcCCCC
Confidence            34556678899999999999999999999999999764 443322  222233345555433

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=81.14  E-value=0.79  Score=35.82  Aligned_cols=39  Identities=26%  Similarity=0.210  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ......+++++++++++++++||+.+|+.+-+.+|..++
T Consensus       164 ~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~va  202 (244)
T d1s2oa1         164 GNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVI  202 (244)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEE
T ss_pred             hHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEE
Confidence            456667889999999999999999999999999986553

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=80.50  E-value=0.94  Score=35.82  Aligned_cols=39  Identities=13%  Similarity=0.003  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972           42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV   80 (274)
Q Consensus        42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi   80 (274)
                      ......+++.+++++++++++||+.+|+.+-+.+|..++
T Consensus       209 ~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va  247 (283)
T d2b30a1         209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA  247 (283)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE
T ss_pred             HHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEE
Confidence            456666888999999999999999999999999997654