Citrus Sinensis ID: 024101

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQIMN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcEEEEcccccccccccHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcEEEcccccccccccHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MAVGLLAAivpkpfcllttklqpssllttkpaplfaplgthrgffngknrrklnSFTVCFVLEEKKQSTQIETFteeeeeesgtqISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWwqmeggevplaEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHmheshhrpregpfelnDVFAIINAVPAIALLSFgffhkglvpglcfgaglgITVFGMAYMFVHDglvhkrfpvgpiadvpyfRRVAAAHQVNDQIMN
Flexible Loop (DISEMBL)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGthrgffngknrrKLNSFTVCFVleekkqstqietfteeeeeesgtqistAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQIMN
Low Complexity Region (SEG)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKqstqietfteeeeeesgtqistAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQIMN
Disordered region (IsUnstruct)
**VGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLE**************************************ERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAH********
Disordered Region (DISOPRED)
***G*L*AIVP********************APLFAPLGT************LNSFTVCFV*********************************************LVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVND****
Disordered Region (DISEMBL)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQ********************TAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQIMN
Disordered Region (DISPRO)
***GLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEK************************ARVAEKL*RKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQIMN
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQIMN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
O49814	316	Beta-carotene hydroxylase	N/A	no	0.908	0.781	0.742	1e-103
B3SGL0	320	Beta-carotene 3-hydroxyla	N/A	no	0.797	0.678	0.772	1e-100
Q9LTG0	303	Beta-carotene 3-hydroxyla	yes	no	0.812	0.729	0.739	1e-96
Q9SZZ8	310	Beta-carotene 3-hydroxyla	no	no	0.794	0.696	0.753	2e-96
O49815	315	Beta-carotene hydroxylase	N/A	no	0.974	0.841	0.636	8e-96
Q9SPK6	322	Beta-carotene 3-hydroxyla	N/A	no	0.606	0.512	0.553	5e-50
Q01332	176	Beta-carotene hydroxylase	N/A	no	0.419	0.647	0.415	6e-17
P21688	175	Beta-carotene hydroxylase	yes	no	0.411	0.64	0.405	2e-16
Q44262	162	Beta-carotene hydroxylase	N/A	no	0.441	0.740	0.36	2e-12
P54973	162	Beta-carotene hydroxylase	N/A	no	0.444	0.746	0.349	7e-12

>sp|O49814|BCH2_CAPAN Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum annuum GN=CA2 PE=2 SV=1

 Score =  375 bits (963), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/256 (74%), Positives = 208/256 (81%), Gaps = 9/256 (3%)

Query: 18  TTKLQPSSLLTTKPAPL------FAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQI 71
           T+  + S  L  KP P         P   + G      RR   SFTVCFVLE+ K  TQ 
Sbjct: 22  TSYYRHSPFLGPKPTPTTPSVYPITPFSPNLGSILRCRRRP--SFTVCFVLEDDKFKTQF 79

Query: 72  ETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWW 131
           E   E+ E +   QIS A R+AEKLARK+SERFTYLVAAVMSSFGITSMAVMAVYYRF+W
Sbjct: 80  EAGEEDIEMKIEEQIS-ATRLAEKLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYW 138

Query: 132 QMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELN 191
           QMEGGEVP +EMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHH+PREGPFELN
Sbjct: 139 QMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHKPREGPFELN 198

Query: 192 DVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPI 251
           DVFAIINAVPAIALL +GFFHKGL+PGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGP+
Sbjct: 199 DVFAIINAVPAIALLDYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPV 258

Query: 252 ADVPYFRRVAAAHQVN 267
           A+VPY R+VAAAH ++
Sbjct: 259 ANVPYLRKVAAAHSLH 274

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Produces beta-cryptoxanthin and zeaxanthin. Uses ferredoxin as an electron donor.
Capsicum annuum (taxid: 4072)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 2EC: 9

>sp|B3SGL0|BCH_GENLU Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY PE=2 SV=1

 Score =  364 bits (935), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/224 (77%), Positives = 200/224 (89%), Gaps = 7/224 (3%)

Query: 51  RKLNSFTVCFVLEEKKQSTQIETFTEEEE------EESGTQISTAA-RVAEKLARKRSER 103
           R     TVCFVLEEK+   ++   +++++      ++   +IS +A ++A+KLARK+SER
Sbjct: 56  RSKPRLTVCFVLEEKELRGKLVVASDDDDGAGEVRKQREKEISASAEKLAQKLARKKSER 115

Query: 104 FTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARW 163
           FTYLVAAVMSSFGITSMAV++VYYRF WQMEGGE+PL+EMFGTFALSVGAAVGMEFWARW
Sbjct: 116 FTYLVAAVMSSFGITSMAVLSVYYRFSWQMEGGEIPLSEMFGTFALSVGAAVGMEFWARW 175

Query: 164 AHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           AH+ALWHASLWHMHESHH+PREGPFELND+FAIINAVPAIALLS+GFFHKGL+PGLCFGA
Sbjct: 176 AHEALWHASLWHMHESHHKPREGPFELNDIFAIINAVPAIALLSYGFFHKGLIPGLCFGA 235

Query: 224 GLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           GLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAH ++
Sbjct: 236 GLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHTLH 279

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Uses ferredoxin as an electron donor.

Gentiana lutea (taxid: 38851)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9LTG0|BCH2_ARATH Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 2 PE=2 SV=1

 Score =  353 bits (905), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 165/223 (73%), Positives = 193/223 (86%), Gaps = 2/223 (0%)

Query: 45  FNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERF 104
           FNG  RRK+   TVCFV+EE+KQS+ ++   + E   S ++I   +R+ +K  +K+SERF
Sbjct: 37  FNGFRRRKI--LTVCFVVEERKQSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query: 105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
           TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct: 95  TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWA 154

Query: 165 HKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAG 224
           H+ALWH SLW+MHESHH+PREG FELNDVFAI NAVPAI LL +GF +KGLVPGLCFGAG
Sbjct: 155 HRALWHDSLWNMHESHHKPREGAFELNDVFAITNAVPAIGLLYYGFLNKGLVPGLCFGAG 214

Query: 225 LGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           LGIT+FGMAYMFVHDGLVHKRFPVGPIA+VPY R+VAAAHQ++
Sbjct: 215 LGITMFGMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLH 257

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9SZZ8|BCH1_ARATH Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 1 PE=1 SV=1

 Score =  352 bits (902), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 165/219 (75%), Positives = 190/219 (86%), Gaps = 3/219 (1%)

Query: 52  KLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQIST---AARVAEKLARKRSERFTYLV 108
           +   F+VC+V+EE++Q++ IE     E   S   I     A R+AEKL RK+SER TYL+
Sbjct: 41  RFKRFSVCYVVEERRQNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLI 100

Query: 109 AAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKAL 168
           AA++SSFGITSMAVMAVYYRF WQMEGGE+ + EMFGTFALSVGAAVGMEFWARWAH+AL
Sbjct: 101 AAMLSSFGITSMAVMAVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRAL 160

Query: 169 WHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGIT 228
           WHASLW+MHESHH+PREGPFELNDVFAI+NA PAI LLS+GFF+KGLVPGLCFGAGLGIT
Sbjct: 161 WHASLWNMHESHHKPREGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGLCFGAGLGIT 220

Query: 229 VFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           VFG+AYMFVHDGLVHKRFPVGPIADVPY R+VAAAHQ++
Sbjct: 221 VFGIAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLH 259

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|O49815|BCH1_CAPAN Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum GN=CA1 PE=1 SV=1

 Score =  350 bits (897), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 175/275 (63%), Positives = 205/275 (74%), Gaps = 10/275 (3%)

Query: 1   MAVGLLAAIVPKPFCLLTTKL-QPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVC 59
           MA  +  +   +  CL       P    T  P   F+PL  +      ++RRK      C
Sbjct: 1   MAAEISISASSRAICLQRNPFPAPKYFATAPPLLFFSPLTCNLDAIL-RSRRK-PRLAAC 58

Query: 60  FVLEEKK-------QSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVM 112
           FVL++ K       + +  E   +E E E+  + S A R+AEK ARK+SERFTYLVAAVM
Sbjct: 59  FVLKDDKLYTAQSGKQSDTEAIGDEIEVETNEEKSLAVRLAEKFARKKSERFTYLVAAVM 118

Query: 113 SSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHAS 172
           SS GITSMAV++VYYRF WQMEGGE+P +EMF TFAL+ GAA+GME+WARWAH+ALWHAS
Sbjct: 119 SSLGITSMAVISVYYRFSWQMEGGEMPFSEMFCTFALAFGAAIGMEYWARWAHRALWHAS 178

Query: 173 LWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGM 232
           LWHMHESHHRPREGPFELND+FAIINAVPAIA  SFGF HKGL+PG+CFGAGLGITVFGM
Sbjct: 179 LWHMHESHHRPREGPFELNDIFAIINAVPAIAFFSFGFNHKGLIPGICFGAGLGITVFGM 238

Query: 233 AYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           AYMFVHDGLVHKRFPVGPIA VPYF+RVAAAHQ++
Sbjct: 239 AYMFVHDGLVHKRFPVGPIAKVPYFQRVAAAHQLH 273

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Produces beta-cryptoxanthin and zeaxanthin. Uses ferredoxin as an electron donor.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9SPK6|BCH_HAEPL Beta-carotene 3-hydroxylase, chloroplastic (Fragment) OS=Haematococcus pluvialis GN=CRTZ PE=2 SV=1

 Score =  197 bits (502), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 3/168 (1%)

Query: 103 RFTYLVAAVMSSFGITSMAVMAVYYRFWWQME-GGEVPLAEMFGTFALSVGAAVGMEFWA 161
           + +Y  AA+ +S G++ +A+ A Y RF   M  GG VP  E+ GT  L VG A+GME +A
Sbjct: 114 QLSYQAAAIAASIGVSGIAIFATYLRFAMHMTVGGAVPWGEVAGTLLLVVGGALGMEMYA 173

Query: 162 RWAHKALWHASL--WHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGL 219
           R+AHKA+WH S   W +H+SHH PR GPFE ND+FAIIN +PA+ L +FGF+   ++   
Sbjct: 174 RYAHKAIWHESPLGWLLHKSHHTPRTGPFEANDLFAIINGLPAMLLCTFGFWLPNVLGAA 233

Query: 220 CFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           CFGAGLGIT++GMAYMFVHDGLVH+RFP GPIA +PY +R+  AHQ++
Sbjct: 234 CFGAGLGITLYGMAYMFVHDGLVHRRFPTGPIAGLPYMKRLTVAHQLH 281

Nonheme diiron monooxygenase involved in the biosynthesis of astaxanthin. Hydroxylates beta-ring of beta-carotene and catalyzes the conversion of canthaxanthin to astaxanthin. Uses ferredoxin as an electron donor.

Haematococcus pluvialis (taxid: 44745)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q01332|CRTZ_ESCVU Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=3 SV=1

 Score = 88.2 bits (217), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 4/118 (3%)

Query: 153 AAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFH 212
           + + ME  A + H+ + H   W  HESHH PR+G FELND+FA++ A  AIAL++ G   
Sbjct: 11  SVIAMEGIAAFTHRYIMHGWGWRWHESHHTPRKGVFELNDLFAVVFAGVAIALIAVGT-- 68

Query: 213 KGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQI 270
            G+ P    G G+  TV+G+ Y  VHDGLVH+R+P   I    Y +R+  AH+++  +
Sbjct: 69  AGVWPLQWIGCGM--TVYGLLYFLVHDGLVHQRWPFHWIPRRGYLKRLYVAHRLHHAV 124

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin.

Escherichia vulneris (taxid: 566)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P21688|CRTZ_PANAN Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=3 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 4/116 (3%)

Query: 155 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKG 214
           +GME  A  AHK + H   W  H SHH PR+G FE+ND++A++ A  +I L+  G    G
Sbjct: 15  IGMEVIAALAHKYIMHGWGWGWHLSHHEPRKGAFEVNDLYAVVFAALSILLIYLG--STG 72

Query: 215 LVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQI 270
           + P    GAG+  T +G+ Y  VHDGLVH+R+P   I    Y +R+  AH+++  +
Sbjct: 73  MWPLQWIGAGM--TAYGLLYFMVHDGLVHQRWPFRYIPRKGYLKRLYMAHRMHHAV 126

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin.

Pantoea ananas (taxid: 553)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q44262|CRTZ_PARS1 Beta-carotene hydroxylase OS=Paracoccus sp. (strain PC1) GN=crtZ PE=3 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 5/125 (4%)

Query: 147 FALSVGAAVGMEFWARWAHKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIAL 205
           F + V   + ME  A   H+ + H  L W  H+SHH   +   E ND++ ++ AV A  L
Sbjct: 4   FLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGVVFAVLATIL 63

Query: 206 LSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQ 265
            + G +     P L + A LG+TV+G+ Y  +HDGLVH+R+P   I    YFRR+  AH+
Sbjct: 64  FTVGAY---WWPVLWWIA-LGMTVYGLIYFILHDGLVHQRWPFRYIPRRGYFRRLYQAHR 119

Query: 266 VNDQI 270
           ++  +
Sbjct: 120 LHHAV 124

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin via beta-cryptoxanthin.

Paracoccus sp. (strain PC1) (taxid: 365615)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P54973|CRTZ_PARSN Beta-carotene hydroxylase OS=Paracoccus sp. (strain N81106 / MBIC 01143) GN=crtZ PE=3 SV=1

 Score = 71.2 bits (173), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 5/126 (3%)

Query: 146 TFALSVGAAVGMEFWARWAHKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIA 204
            F + V   + ME  A   H+ + H  L W  H+SHH   +   E ND++ ++ AV A  
Sbjct: 3   NFLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGLVFAVIATV 62

Query: 205 LLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAH 264
           L + G+      P L + A LG+TV+G+ Y  +HDGLVH+R+P   I    Y RR+  AH
Sbjct: 63  LFTVGWI---WAPVLWWIA-LGMTVYGLIYFVLHDGLVHQRWPFRYIPRKGYARRLYQAH 118

Query: 265 QVNDQI 270
           +++  +
Sbjct: 119 RLHHAV 124

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin via beta-cryptoxanthin.

Paracoccus sp. (strain N81106 / MBIC 01143) (taxid: 81397)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
78711803	311	carotenoid beta-ring hydroxylase [Citrus	0.981	0.858	0.988	1e-152
11245486	311	beta-carotene hydroxylase [Citrus unshiu	0.981	0.858	0.985	1e-152
9988836	311	beta-carotene hydroxylase [Citrus unshiu	0.981	0.858	0.981	1e-151
116874786	311	beta-carotene hydroxylase [Citrus kinoku	0.981	0.858	0.977	1e-143
62912179	311	beta carotene hydoxylase [Citrus maxima]	0.988	0.864	0.970	1e-143
49036137	198	beta-carotene hydroxylase [Citrus sinens	0.727	1.0	0.979	1e-109
255545186	303	beta-carotene hydroxylase, putative [Ric	0.952	0.854	0.736	1e-105
262036878	310	beta-carotene hydroxylase [Ipomoea nil]	0.974	0.854	0.739	1e-105
325461582	305	beta-carotene hydroxylase [Carica papaya	0.937	0.836	0.727	1e-104
225464577	306	PREDICTED: beta-carotene hydroxylase 2,	0.875	0.777	0.785	1e-104

>gi|78711803|gb|ABB49053.1| carotenoid beta-ring hydroxylase [Citrus sinensis]

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/267 (98%), Positives = 267/267 (100%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFT+EEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTDEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240
           HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240

Query: 241 LVHKRFPVGPIADVPYFRRVAAAHQVN 267
           LVHKRFPVGPIADVPYFRRVAAAHQ++
Sbjct: 241 LVHKRFPVGPIADVPYFRRVAAAHQLH 267

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|11245486|gb|AAG33636.1|AF315289_1 beta-carotene hydroxylase [Citrus unshiu]

 Score =  541 bits (1395), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 263/267 (98%), Positives = 266/267 (99%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTH GFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHHGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFT+EEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTDEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240
           HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240

Query: 241 LVHKRFPVGPIADVPYFRRVAAAHQVN 267
           LVHKRFPVGPIADVPYFRRVAAAHQ++
Sbjct: 241 LVHKRFPVGPIADVPYFRRVAAAHQLH 267

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9988836|gb|AAG10793.1|AF296158_1 beta-carotene hydroxylase [Citrus unshiu]

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/267 (98%), Positives = 265/267 (99%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGT  GFFNGKNRRK+NSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTRHGFFNGKNRRKINSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240
           HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240

Query: 241 LVHKRFPVGPIADVPYFRRVAAAHQVN 267
           LVHKRFPVGPIADVPYFRRVAAAHQ++
Sbjct: 241 LVHKRFPVGPIADVPYFRRVAAAHQLH 267

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116874786|emb|CAL63739.1| beta-carotene hydroxylase [Citrus kinokuni]

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/267 (97%), Positives = 265/267 (99%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAA+VPKPFCLLTTKLQPSSLLTTKPAPLFAPLGT  GFFNGKNRRK+NSFTVCF
Sbjct: 1   MAVGLLAAVVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTRHGFFNGKNRRKINSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240
           HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240

Query: 241 LVHKRFPVGPIADVPYFRRVAAAHQVN 267
           LVHKRFPVGPIADVPYFRRVAAAHQ++
Sbjct: 241 LVHKRFPVGPIADVPYFRRVAAAHQLH 267

Source: Citrus kinokuni

Species: Citrus kinokuni

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62912179|gb|AAY21681.1| beta carotene hydoxylase [Citrus maxima]

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/269 (97%), Positives = 264/269 (98%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPL+APLGTH GFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLYAPLGTHHGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240
           HRPREGPFELNDVFAIINAVPAIALLS GFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSVGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDG 240

Query: 241 LVHKRFPVGPIADVPYFRRVAAAHQVNDQ 269
           LVHKRFPVGPIA VPYFRRVAAAHQ++  
Sbjct: 241 LVHKRFPVGPIAGVPYFRRVAAAHQLHHS 269

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49036137|gb|AAT48741.1| beta-carotene hydroxylase [Citrus sinensis]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/198 (97%), Positives = 195/198 (98%)

Query: 26  LLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQ 85
           LLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFT+EEE ESGTQ
Sbjct: 1   LLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTDEEEGESGTQ 60

Query: 86  ISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFG 145
           ISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFG
Sbjct: 61  ISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFG 120

Query: 146 TFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIAL 205
           TF LS GAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIAL
Sbjct: 121 TFVLSAGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIAL 180

Query: 206 LSFGFFHKGLVPGLCFGA 223
           LSFGFFHKGLVPGLCFGA
Sbjct: 181 LSFGFFHKGLVPGLCFGA 198

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545186|ref|XP_002513654.1| beta-carotene hydroxylase, putative [Ricinus communis] gi|223547562|gb|EEF49057.1| beta-carotene hydroxylase, putative [Ricinus communis]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/269 (73%), Positives = 217/269 (80%), Gaps = 10/269 (3%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAP--LFAPLGTHRGFFNGKNRRKLNSFTV 58
           MA GL AA V KPF  +      +S +  KP P  L  P   +   F G  R+    F +
Sbjct: 1   MAAGLSAAPVFKPFRYIN-----ASYILPKPLPTSLVPPSTRYNSLFLGGRRK--TGFAI 53

Query: 59  CFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGIT 118
           CFVLE+ KQS + E   EEE E+   QI T  RVAE+LARKRSERFTYLVAAVMSSFGIT
Sbjct: 54  CFVLEDLKQSVETENPVEEENEKVNYQILTP-RVAERLARKRSERFTYLVAAVMSSFGIT 112

Query: 119 SMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE 178
           SMAVMA YYRF+WQMEGGEVPLAEMFGTF+LSVGAAVGMEFWARWAH+ALWHASLWHMHE
Sbjct: 113 SMAVMACYYRFYWQMEGGEVPLAEMFGTFSLSVGAAVGMEFWARWAHRALWHASLWHMHE 172

Query: 179 SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVH 238
           SHHRPREGPFELNDVFAI NAVPAI LL +GFF+KGL PGLCFGAGLGITVFGMAYMFVH
Sbjct: 173 SHHRPREGPFELNDVFAITNAVPAIGLLYYGFFNKGLFPGLCFGAGLGITVFGMAYMFVH 232

Query: 239 DGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           DGLVHKRFPVGPIA+VPYFR+VAAAHQ++
Sbjct: 233 DGLVHKRFPVGPIANVPYFRKVAAAHQLH 261

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|262036878|dbj|BAI47580.1| beta-carotene hydroxylase [Ipomoea nil]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/269 (73%), Positives = 223/269 (82%), Gaps = 4/269 (1%)

Query: 1   MAVGL-LAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVC 59
           MAVG+ +AA     +    + ++P++   + P+ LF+PL         ++RRK  S TVC
Sbjct: 1   MAVGISIAASSRTVYSCQFSLVRPATHSASPPSLLFSPLSRRFRSSVLRSRRK-PSLTVC 59

Query: 60  FVLEEKK-QSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGIT 118
           FVLE++K +S  +E   EE E     QIS A+R+AEKLARKRSERFTYLVAAVMSS GIT
Sbjct: 60  FVLEDEKLESGGVEIRAEEIERAIEKQIS-ASRLAEKLARKRSERFTYLVAAVMSSLGIT 118

Query: 119 SMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE 178
           SMAV+AVYYRF WQMEGGEVP  EMFGTFALSVGAAVGMEFWARWAH+ALWHASLWHMHE
Sbjct: 119 SMAVLAVYYRFAWQMEGGEVPYTEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHE 178

Query: 179 SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVH 238
           SHHRPREGPFELNDVFAI NAVPAIALLS+GFFHKGLVPGLCFGAGLGITVFGMAYMFVH
Sbjct: 179 SHHRPREGPFELNDVFAITNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVH 238

Query: 239 DGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           DGLVHKRFPVGPIADVPYFRRVAAAHQ++
Sbjct: 239 DGLVHKRFPVGPIADVPYFRRVAAAHQLH 267

Source: Ipomoea nil

Species: Ipomoea nil

Genus: Ipomoea

Family: Convolvulaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325461582|gb|ADZ14893.1| beta-carotene hydroxylase [Carica papaya]

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/275 (72%), Positives = 219/275 (79%), Gaps = 20/275 (7%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAP-----LFAPL--GTHRGFFNGKNRRKL 53
           MA GL AAI  K            S  + +P P     L +PL  G +RG F    R   
Sbjct: 1   MAAGLSAAITLKSL---------GSFHSAQPYPPPKPTLISPLSRGLNRGIFRPHKR--- 48

Query: 54  NSFTVCFVLEEKKQSTQIETFTEE-EEEESGTQISTAARVAEKLARKRSERFTYLVAAVM 112
            +F VCFVLEE+KQ  QIE   EE   ++   +   A+++AEKLARKRSERFTYLVAAVM
Sbjct: 49  TTFAVCFVLEEQKQIAQIENQAEELSSKDVELEQILASKMAEKLARKRSERFTYLVAAVM 108

Query: 113 SSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHAS 172
           SSFGITSMAVMAVYYRF WQMEGGEVP +EMFGTFALSVGAAVGMEFWARWAH+ALWHAS
Sbjct: 109 SSFGITSMAVMAVYYRFAWQMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHRALWHAS 168

Query: 173 LWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGM 232
           LWHMHESHHRPREGPFELNDVFAI NAVPAIALLS+GFF+KGLVPGLCFGAGLGITVFGM
Sbjct: 169 LWHMHESHHRPREGPFELNDVFAITNAVPAIALLSYGFFNKGLVPGLCFGAGLGITVFGM 228

Query: 233 AYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           AYMFVHDGLVHKRFPVGPIA+VPYFRRVAAAHQ++
Sbjct: 229 AYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLH 263

Source: Carica papaya

Species: Carica papaya

Genus: Carica

Family: Caricaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464577|ref|XP_002273581.1| PREDICTED: beta-carotene hydroxylase 2, chloroplastic isoform 1 [Vitis vinifera]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/247 (78%), Positives = 212/247 (85%), Gaps = 9/247 (3%)

Query: 22  QPSSLLTTKPAPLFAP-LGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEE 80
           +P+S  T  P  LF P +  H   F  + + +L   TVCFV+EE+K ST++       EE
Sbjct: 25  KPTSPFT--PTSLFIPSIRRHENIFRCRKKTRL---TVCFVVEEEKLSTEV--VENRSEE 77

Query: 81  ESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPL 140
              +QIS AARVAEKLARKRSER TYLVAAVMSSFGITSMAVMAVYYRF WQMEGGEVPL
Sbjct: 78  TLASQIS-AARVAEKLARKRSERLTYLVAAVMSSFGITSMAVMAVYYRFSWQMEGGEVPL 136

Query: 141 AEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAV 200
           +EMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHH+PREGPFELNDVFAI NAV
Sbjct: 137 SEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHKPREGPFELNDVFAITNAV 196

Query: 201 PAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRV 260
           PAIALLS+GFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVH+RFPVGPIA+VPYFRRV
Sbjct: 197 PAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRRV 256

Query: 261 AAAHQVN 267
           AAAHQ++
Sbjct: 257 AAAHQLH 263

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
TAIR|locus:2131381	310	BETA-OHASE 1 "beta-hydroxylase	0.794	0.696	0.726	1.4e-85
TAIR|locus:2149599	303	BETA-OHASE 2 "beta-carotene hy	0.812	0.729	0.717	1.8e-85

TAIR|locus:2131381 BETA-OHASE 1 "beta-hydroxylase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
 Identities = 159/219 (72%), Positives = 182/219 (83%)

Query:    52 KLNSFTVCFVLEEKKXXXXXXXXX---XXXXXXXXXXXXXAARVAEKLARKRSERFTYLV 108
             +   F+VC+V+EE++                         A R+AEKL RK+SER TYL+
Sbjct:    41 RFKRFSVCYVVEERRQNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLI 100

Query:   109 AAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKAL 168
             AA++SSFGITSMAVMAVYYRF WQMEGGE+ + EMFGTFALSVGAAVGMEFWARWAH+AL
Sbjct:   101 AAMLSSFGITSMAVMAVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRAL 160

Query:   169 WHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGIT 228
             WHASLW+MHESHH+PREGPFELNDVFAI+NA PAI LLS+GFF+KGLVPGLCFGAGLGIT
Sbjct:   161 WHASLWNMHESHHKPREGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGLCFGAGLGIT 220

Query:   229 VFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
             VFG+AYMFVHDGLVHKRFPVGPIADVPY R+VAAAHQ++
Sbjct:   221 VFGIAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLH 259

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IGI;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016123 "xanthophyll biosynthetic process" evidence=IGI

GO:0016119 "carotene metabolic process" evidence=IGI

TAIR|locus:2149599 BETA-OHASE 2 "beta-carotene hydroxylase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
 Identities = 160/223 (71%), Positives = 182/223 (81%)

Query:    45 FNGKNRRKLNSFTVCFVLEEKKXXXXXXXXXXXXXXXXXXXXXXAARVAEKLARKRSERF 104
             FNG  RRK+   TVCFV+EE+K                       +R+ +K  +K+SERF
Sbjct:    37 FNGFRRRKI--LTVCFVVEERKQSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query:   105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
             TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct:    95 TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWA 154

Query:   165 HKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAG 224
             H+ALWH SLW+MHESHH+PREG FELNDVFAI NAVPAI LL +GF +KGLVPGLCFGAG
Sbjct:   155 HRALWHDSLWNMHESHHKPREGAFELNDVFAITNAVPAIGLLYYGFLNKGLVPGLCFGAG 214

Query:   225 LGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
             LGIT+FGMAYMFVHDGLVHKRFPVGPIA+VPY R+VAAAHQ++
Sbjct:   215 LGITMFGMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLH 257


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.139   0.450    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      272       250   0.00080  114 3  11 22  0.48    32
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  196 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.75u 0.18s 18.93t   Elapsed:  00:00:00
  Total cpu time:  18.75u 0.18s 18.93t   Elapsed:  00:00:00
  Start:  Sat May 11 10:57:30 2013   End:  Sat May 11 10:57:30 2013

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IGI;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016119 "carotene metabolic process" evidence=IGI

GO:0016123 "xanthophyll biosynthetic process" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49815	BCH1_CAPAN	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.6363	0.9742	0.8412	N/A	no
O49814	BCH2_CAPAN	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.7421	0.9080	0.7816	N/A	no
Q9LTG0	BCH2_ARATH	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.7399	0.8125	0.7293	yes	no
B3SGL0	BCH_GENLU	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.7723	0.7977	0.6781	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	272
PLN02601	303	PLN02601, PLN02601, beta-carotene hydroxylase	1e-132
pfam04116	114	pfam04116, FA_hydroxylase, Fatty acid hydroxylase	3e-07

>gnl|CDD|178211 PLN02601, PLN02601, beta-carotene hydroxylase

 Score =  377 bits (968), Expect = e-132
 Identities = 168/223 (75%), Positives = 195/223 (87%), Gaps = 2/223 (0%)

Query: 45  FNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERF 104
           FNG  RRK+   TVCFV+EE+KQS+ +E   + E   S ++I   +R+ +K  +K+SERF
Sbjct: 37  FNGFRRRKI--LTVCFVVEERKQSSPMENDEKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query: 105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
           TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct: 95  TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSMLEMFGTFALSVGAAVGMEFWARWA 154

Query: 165 HKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAG 224
           H+ALWH SLW+MHESHH+PREG FELNDVFAI+NAVPAI LL +GFF+KGLVPGLCFGAG
Sbjct: 155 HRALWHDSLWNMHESHHKPREGAFELNDVFAIVNAVPAIGLLYYGFFNKGLVPGLCFGAG 214

Query: 225 LGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
           LGITVFGMAYMFVHDGLVHKRFPVGPIA+VPY R+VAAAHQ++
Sbjct: 215 LGITVFGMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLH 257

Length = 303

>gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily

 Score = 47.9 bits (114), Expect = 3e-07
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 8/117 (6%)

Query: 151 VGAAVGMEFWARWAHKAL-WHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFG 209
           +   +  +F   W H+ L     LW  H+ HH            F  + A+    +    
Sbjct: 2   LLGLLLFDFVEYWVHRLLHRVPFLWRFHKVHHSDESPNPLTAFRFHPLEALLLALIPLLL 61

Query: 210 FFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQV 266
                L         LG+ +  + Y+F+H GL     P+       Y       H++
Sbjct: 62  LLL--LFGLHLLVILLGLLLGTLLYLFIHSGLHLWLPPLL-----SYLFVTPRYHRL 111

This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins. Length = 114

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
PLN02601	303	beta-carotene hydroxylase	100.0
PF04116	114	FA_hydroxylase: Fatty acid hydroxylase superfamily	99.45
PLN02434	237	fatty acid hydroxylase	98.12
COG3000	271	ERG3 Sterol desaturase [Lipid metabolism]	97.82
PLN02869	620	fatty aldehyde decarbonylase	95.42
TIGR02230	100	ATPase_gene1 F0F1-ATPase subunit, putative. This m	92.12
PF11947	153	DUF3464: Protein of unknown function (DUF3464); In	87.93
PRK03557	312	zinc transporter ZitB; Provisional	83.1
COG1230	296	CzcD Co/Zn/Cd efflux system component [Inorganic i	80.75

>PLN02601 beta-carotene hydroxylase

Probab=100.00  E-value=1.8e-105  Score=733.09  Aligned_cols=258  Identities=67%  Similarity=1.122  Sum_probs=232.6

Q ss_pred             Ccccccc-ccccccccccccccCCCCCCCCCCCCccCCcccccccccccccCCCCceeEEEEeccccccccccccchhhh
Q 024101            1 MAVGLLA-AIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEE   79 (272)
Q Consensus         1 ma~~~s~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~c~v~~~~~~~~~~~~~~~~~~   79 (272)
                      ||+|||+ |.|++|.+.     ..+..+.|+++..|+|..+..   +.||  + ++++||||+||+++.+++++++|+++
T Consensus         1 ma~~~~~~~~t~~~l~~-----~~~~~~~~~~~~~f~~~~~~~---~~~~--~-~~~~~c~v~~~~~~~~~~~~~~~~~~   69 (303)
T PLN02601          1 MAAGLSTIAVTLKPLHR-----SDFRLNHPISLAVFPPSLRFN---GFRR--R-KILTVCFVVEERKQSSPMENDEKPES   69 (303)
T ss_pred             CcccccccccccccCcc-----cCccCCCCcccccCCHHHHhh---hccc--C-CceeEEEEeccccccccccccchhhh
Confidence            8999999 999999654     344455555567788864321   2233  3 56899999999999887777666665


Q ss_pred             hhhhhhcchHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhHHHHHHHhhhhhhhccCCCccHHHHHHHHHHHHHHHHHHHH
Q 024101           80 EESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEF  159 (272)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~rk~~er~ty~~aa~~ss~gi~~~a~~a~y~rf~~~m~~g~~p~~eM~~~~~l~lgtfvgMEf  159 (272)
                      ++.+++...++|++||++||||||+||++||+|||+||||||++||||||+|||||||||+.||++++++++|||++|||
T Consensus        70 ~~~~~~~~~~~~~~~~~~~k~~er~ty~~aa~~ss~gi~s~a~~a~y~rf~~~~~~g~~p~~em~~~~al~lgtfvgMEf  149 (303)
T PLN02601         70 TTSSSEILMTSRLLKKAEKKKSERFTYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSMLEMFGTFALSVGAAVGMEF  149 (303)
T ss_pred             hhhhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHHhhcHHHHHHHHHHHHHhhccCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence            55555555569999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhhccCCCCCCCCCccchhhHhhhHHHHHHHHHhhcccCCCcchhhhhhhhhhhhhhhHHhhhhc
Q 024101          160 WARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHD  239 (272)
Q Consensus       160 ~Aw~aHKylMHG~LW~~H~sHH~pr~G~FE~NDlFaiifAvpAi~Li~~G~~~~g~~p~l~fgiGlGITlYGiaYffVHD  239 (272)
                      ||||+|||||||+||.||||||+|++|+||+||+|||+||+|||+||++|++++|++|++|||||+|||+||++||||||
T Consensus       150 ~Aw~aHKYvMHG~LW~lH~sHH~Pr~g~FE~NDlFaVifAvpAIaL~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHD  229 (303)
T PLN02601        150 WARWAHRALWHDSLWNMHESHHKPREGAFELNDVFAIVNAVPAIGLLYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHD  229 (303)
T ss_pred             HHHHHHHHHHHhcchhhhhhcCCCCCCCcccccchhhhhHHHHHHHHHHhhccccccHHHHHHHHHhHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             ceecCcccCCcCCCCHHHHHHHHHHHhhhc
Q 024101          240 GLVHKRFPVGPIADVPYFRRVAAAHQVNDQ  269 (272)
Q Consensus       240 gLVHqRfp~~~~a~~pYlrrl~~AHklHH~  269 (272)
                      ||||||||+++++|+||+|||++|||+||+
T Consensus       230 gLVHqRfp~~~~a~~~Y~rrl~~AHklHHa  259 (303)
T PLN02601        230 GLVHKRFPVGPIANVPYLRKVAAAHQLHHT  259 (303)
T ss_pred             hhhccccccCCCCCCHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999997

>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases

Probab=99.45  E-value=6.6e-14  Score=105.73  Aligned_cols=110  Identities=29%  Similarity=0.582  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--hhhhhhhccCCCCC-CCCCccchhhHhhhHHHHHHHHHhhcccCCCcchhhhhhhhhh
Q 024101          151 VGAAVGMEFWARWAHKALWH--ASLWHMHESHHRPR-EGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGI  227 (272)
Q Consensus       151 lgtfvgMEf~Aw~aHKylMH--G~LW~~H~sHH~pr-~G~FE~NDlFaiifAvpAi~Li~~G~~~~g~~p~l~fgiGlGI  227 (272)
                      +++++.+|++.|++|| +||  +++|.+|+.||++. ..++.... +..+.++....+..++..-  ..+.-...+.+|+
T Consensus         2 ~~~~l~~d~~~Y~~HR-l~H~~~~l~~~H~~HH~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   77 (114)
T PF04116_consen    2 LLGFLLWDFWEYWMHR-LLHKIPFLWRIHKVHHSPKNPTPLSAFR-FHPLEALLLALLPLLLPLL--LLPFHALAFLLGI   77 (114)
T ss_pred             eeeHHHHHHHHHHHHH-HHhcCchHHHHHHHHhCCcccCchHHHH-cChHHHHHHHHHHHHHHHH--HHhHhHHHHHHHH
Confidence            5678999999999999 999  68999999999764 34443222 2222222222222111000  0111245677999


Q ss_pred             hhhhhHHhhhhcceecCcccCCcCCCCHHHHHHHHHHHhhhc
Q 024101          228 TVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQ  269 (272)
Q Consensus       228 TlYGiaYffVHDgLVHqRfp~~~~a~~pYlrrl~~AHklHH~  269 (272)
                      +++++.|.+.|+++ +.+.+    ...+|++...+.|++||+
T Consensus        78 ~~~~~~~~~~H~~~-~~~~~----~~~~~~~~~~~~H~~HH~  114 (114)
T PF04116_consen   78 ALFYLWYIFIHSGY-HHRFP----PRLRYLFVTPRHHDLHHS  114 (114)
T ss_pred             HHHHHHHHHhhcCc-cCCCC----CcchhHhcCHHHHHhhCc
Confidence            99999999999999 43332    445799999999999995

Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process

>PLN02434 fatty acid hydroxylase

Probab=98.12  E-value=3.7e-05  Score=70.20  Aligned_cols=112  Identities=17%  Similarity=0.131  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh---------hhhhhhccCC-CCCCC-CCccchhhHhhhHHHHHHHHHhhcccCCC
Q 024101          147 FALSVGAAVGMEFWARWAHKALWHA---------SLWHMHESHH-RPREG-PFELNDVFAIINAVPAIALLSFGFFHKGL  215 (272)
Q Consensus       147 ~~l~lgtfvgMEf~Aw~aHKylMHG---------~LW~~H~sHH-~pr~G-~FE~NDlFaiifAvpAi~Li~~G~~~~g~  215 (272)
                      +++++++++.-=++-|.+||++.|.         ....+|..|| .|.+. .+=-==..+++.+.|...++.+-+ .+  
T Consensus        84 ~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P~D~~rLv~PP~~~~~l~~~~~~l~~~~~-~~--  160 (237)
T PLN02434         84 VLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHPMDGLRLVFPPAATAILCVPFWNLIALFA-TP--  160 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCCCCCCCeecCcHHHHHHHHHHHHHHHHHc-ch--
Confidence            3444555555566668899999994         3456899999 46554 211112344444444443333221 11  


Q ss_pred             cchhhhhhhhhhhhhhhHHhhhhcceecCcccCCcCCCCHHHHHHHHHHHhhhc
Q 024101          216 VPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQ  269 (272)
Q Consensus       216 ~p~l~fgiGlGITlYGiaYffVHDgLVHqRfp~~~~a~~pYlrrl~~AHklHH~  269 (272)
                        ....++-.|..+.-++|=.+|-.+=|.      +++.+|+|++.+-|..||-
T Consensus       161 --~~a~~~~~G~l~gYl~Yd~~Hy~lH~~------~p~~~~~r~lkr~H~~HHf  206 (237)
T PLN02434        161 --ATAPALFGGGLLGYVMYDCTHYFLHHG------QPSTDVLRNLKKYHLNHHF  206 (237)
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHHHHHhc------CcchHHHHHHHHHHHHHcC
Confidence              112233345555558899999876552      3456899999999999994

>COG3000 ERG3 Sterol desaturase [Lipid metabolism]

Probab=97.82  E-value=0.00019  Score=64.92  Aligned_cols=112  Identities=19%  Similarity=0.282  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhccCCCCC-CC--CCccchhhHhhhH--HHHHHHHHhhcccCCCcchhh
Q 024101          147 FALSVGAAVGMEFWARWAHKALWHAS-LWHMHESHHRPR-EG--PFELNDVFAIINA--VPAIALLSFGFFHKGLVPGLC  220 (272)
Q Consensus       147 ~~l~lgtfvgMEf~Aw~aHKylMHG~-LW~~H~sHH~pr-~G--~FE~NDlFaiifA--vpAi~Li~~G~~~~g~~p~l~  220 (272)
                      .+..+.+++.-|++=+|+||..=+.. +|.+|+-||... .-  .=..|+.+-.+..  .-.+.++.+|.     .   .
T Consensus        96 ~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~~~-----~---~  167 (271)
T COG3000          96 ALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLLGL-----S---P  167 (271)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHhcC-----C---H
Confidence            45556688899999999999988885 799999999532 22  2244444433222  12222333442     2   2


Q ss_pred             hhhhhhhhhhhhHHhhhhcceecCcccCCcCCCCHHHHHHHHHHHhhhcc
Q 024101          221 FGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQI  270 (272)
Q Consensus       221 fgiGlGITlYGiaYffVHDgLVHqRfp~~~~a~~pYlrrl~~AHklHH~v  270 (272)
                      ..+++.+++-++.+++.|.++.+. .+.+..   +|.-...+-|++||+.
T Consensus       168 ~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~---~~v~~~p~~H~lHH~~  213 (271)
T COG3000         168 VAVALLFIFLLFWAVLIHSNLDLP-LPLGWL---RYVFNTPRHHRLHHSK  213 (271)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccc-CCcccc---eeeecCchHHHHhccC
Confidence            346688889999999999999986 444332   2344556779999975

>PLN02869 fatty aldehyde decarbonylase

Probab=95.42  E-value=0.042  Score=56.75  Aligned_cols=57  Identities=26%  Similarity=0.448  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHHHHh-hhhhhhccCCCCC-CCC-------CccchhhHhhhHHHHHHHHHhh
Q 024101          153 AAVGMEFWARWAHKALWHA-SLWHMHESHHRPR-EGP-------FELNDVFAIINAVPAIALLSFG  209 (272)
Q Consensus       153 tfvgMEf~Aw~aHKylMHG-~LW~~H~sHH~pr-~G~-------FE~NDlFaiifAvpAi~Li~~G  209 (272)
                      =+..+|++-+|.||..=|. ++|..|+-||... ..|       ||-.=++.+++++|.+.+++.|
T Consensus       134 hv~~~Df~fYW~HRllH~~~LYwr~HkvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g  199 (620)
T PLN02869        134 HMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTG  199 (620)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcc
Confidence            3445899999999977665 4799999999642 323       2211123445566655554444

>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative

Probab=92.12  E-value=1  Score=36.98  Aligned_cols=66  Identities=15%  Similarity=0.134  Sum_probs=36.9

Q ss_pred             HhhhhhhhHHHHHHHHHhhhhhHHHHHHHhhhhhhhcc---CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024101           97 ARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQME---GGEVPLAEMFGTFALSVGAAVGMEFWARWAHK  166 (272)
Q Consensus        97 ~rk~~er~ty~~aa~~ss~gi~~~a~~a~y~rf~~~m~---~g~~p~~eM~~~~~l~lgtfvgMEf~Aw~aHK  166 (272)
                      |||+.+|..+.--+.+|++|+.-.+...+-+=.=+-++   +++..++    ..++.+|.++|+=.+=.|+||
T Consensus        30 a~r~~~~~~~~~l~~~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~t----l~~lllGv~~G~~n~w~wi~r   98 (100)
T TIGR02230        30 ARKNATRSIWEGLGMFGLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWT----LTMLIVGVVIGCLNAWHWVSR   98 (100)
T ss_pred             HHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHH----HHHHHHHHHHHHHHHHHHHhc
Confidence            34445788898899999999865544333222222232   3443332    335556666666555555554

This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.

>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised

Probab=87.93  E-value=3.3  Score=36.31  Aligned_cols=57  Identities=18%  Similarity=0.296  Sum_probs=36.7

Q ss_pred             HHHHHHHhhhhhhhHHHHHHHHHhhhhhHHHHHHHhhhhhhhccC--CCccHHHH-HHHHHHHHHHHHHHH
Q 024101           91 RVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEG--GEVPLAEM-FGTFALSVGAAVGME  158 (272)
Q Consensus        91 ~~~~~~~rk~~er~ty~~aa~~ss~gi~~~a~~a~y~rf~~~m~~--g~~p~~eM-~~~~~l~lgtfvgME  158 (272)
                      -|++|+.|+           |+-++||-....+++.-=|+|-.+.  .|+|-.-. +.+++++..+++|.-
T Consensus        56 ~Vs~RM~rR-----------m~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGis  115 (153)
T PF11947_consen   56 VVSNRMLRR-----------MAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGIS  115 (153)
T ss_pred             HHHHHHHHH-----------HHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhh
Confidence            567777664           4456677666666666666676654  67776666 566666666777654

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.

>PRK03557 zinc transporter ZitB; Provisional

Probab=83.10  E-value=12  Score=34.59  Aligned_cols=128  Identities=14%  Similarity=0.204  Sum_probs=61.6

Q ss_pred             HHHHHHHhhhh-h-------hhHHHHHHHHHhhhhhHHHHHHHhhhhhhhccCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 024101           91 RVAEKLARKRS-E-------RFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWAR  162 (272)
Q Consensus        91 ~~~~~~~rk~~-e-------r~ty~~aa~~ss~gi~~~a~~a~y~rf~~~m~~g~~p~~eM~~~~~l~lgtfvgMEf~Aw  162 (272)
                      -++.|+++|.. +       |..++. +...++.+...++..+|-=..--.++-+++..-   .+.+.+.+++.-++..|
T Consensus        65 l~a~~~s~kp~d~~hpyG~~r~E~l~-al~~~~~l~~~~~~i~~eai~~l~~~~~~~~~~---~~~v~~~~~~~~~~~~~  140 (312)
T PRK03557         65 LLAVQFSRRPPTIRHTFGWLRLTTLA-AFVNAIALVVITILIVWEAIERFRTPRPVAGGM---MMAIAVAGLLANILSFW  140 (312)
T ss_pred             HHHHHHhcCCCCCCCCCchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCccccchH---HHHHHHHHHHHHHHHHH
Confidence            46777777664 4       444444 444555555555555542111112333333222   22233445566666666


Q ss_pred             HHHHHHHHhhhhhhhccCCCCCCCCC------ccchhhHhhhHHHHHHHHHh-hcccCCCcchhhhhhhhhhhhhhhHHh
Q 024101          163 WAHKALWHASLWHMHESHHRPREGPF------ELNDVFAIINAVPAIALLSF-GFFHKGLVPGLCFGAGLGITVFGMAYM  235 (272)
Q Consensus       163 ~aHKylMHG~LW~~H~sHH~pr~G~F------E~NDlFaiifAvpAi~Li~~-G~~~~g~~p~l~fgiGlGITlYGiaYf  235 (272)
                      +.+++             .+.+....      =+||++.-+.++.++++..+ |+    .+.+-..++.+++.+.-.+|-
T Consensus       141 ~~~~~-------------~~~~s~~l~a~~~h~~~D~l~s~~vlv~~~~~~~~g~----~~~Dpi~~ilis~~i~~~~~~  203 (312)
T PRK03557        141 LLHHG-------------SEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWTGW----TPADPILSILVSVLVLRSAWR  203 (312)
T ss_pred             HHhcc-------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----cchhHHHHHHHHHHHHHHHHH
Confidence            55432             11111122      25788777766666655432 43    122224455566666555555


Q ss_pred             hhhc
Q 024101          236 FVHD  239 (272)
Q Consensus       236 fVHD  239 (272)
                      ++-|
T Consensus       204 l~~~  207 (312)
T PRK03557        204 LLKE  207 (312)
T ss_pred             HHHH
Confidence            5444

>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

Probab=80.75  E-value=11  Score=36.00  Aligned_cols=130  Identities=18%  Similarity=0.298  Sum_probs=77.5

Q ss_pred             HHHHHHHHhhhh-hhhHH------HHHHHHHhhhhhHHHHHHHh---hhhhhhccCCCccHHHHHHHHHHHHHHHHHHHH
Q 024101           90 ARVAEKLARKRS-ERFTY------LVAAVMSSFGITSMAVMAVY---YRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEF  159 (272)
Q Consensus        90 ~~~~~~~~rk~~-er~ty------~~aa~~ss~gi~~~a~~a~y---~rf~~~m~~g~~p~~eM~~~~~l~lgtfvgMEf  159 (272)
                      .-+|.+++||++ .|+||      ..+|..+.+-+...+++-+|   .||   .+.-+++..+|+..-++-   .+.==+
T Consensus        67 al~A~~~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~s~~I~~EAi~R~---~~P~~i~~~~ml~va~~G---L~vN~~  140 (296)
T COG1230          67 ALIAIKLARRPATKRFTFGYKRLEILAAFLNALLLIVVSLLILWEAIQRL---LAPPPIHYSGMLVVAIIG---LVVNLV  140 (296)
T ss_pred             HHHHHHHhcCCCCCCCCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCCCccchHHHHHHH---HHHHHH
Confidence            357788887775 45677      45777777666666666555   555   345677778885332222   221122


Q ss_pred             HHHHHHHHHHHhhhhhhhccCCC--CCCC-CCc-cchhhHhhhHHHHHHHHHhhcccCCCcchhhhhhhhhhhhhhhHHh
Q 024101          160 WARWAHKALWHASLWHMHESHHR--PREG-PFE-LNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYM  235 (272)
Q Consensus       160 ~Aw~aHKylMHG~LW~~H~sHH~--pr~G-~FE-~NDlFaiifAvpAi~Li~~G~~~~g~~p~l~fgiGlGITlYGiaYf  235 (272)
                      .+            |-+|++||+  .-+| .+. .+|...=+-++.|-+++.+-   +..+++...++++++...--+|-
T Consensus       141 ~a------------~ll~~~~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~---~w~~~Dpi~si~i~~lil~~a~~  205 (296)
T COG1230         141 SA------------LLLHKGHEENLNMRGAYLHVLGDALGSVGVIIAAIVIRFT---GWSWLDPILSIVIALLILSSAWP  205 (296)
T ss_pred             HH------------HHhhCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCccchHHHHHHHHHHHHHHHH
Confidence            23            556666442  2233 444 49998888777776655432   21344556677777777777888


Q ss_pred             hhhcc
Q 024101          236 FVHDG  240 (272)
Q Consensus       236 fVHDg  240 (272)
                      +..|-
T Consensus       206 l~k~s  210 (296)
T COG1230         206 LLKES  210 (296)
T ss_pred             HHHHH
Confidence            88776

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	272
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	86.06
3j1z_P	306	YIIP, cation efflux family protein; zinc transport	81.14

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A

Probab=86.06  E-value=0.29  Score=42.48  Aligned_cols=131  Identities=14%  Similarity=0.150  Sum_probs=70.7

Q ss_pred             HHHHHHHhhh-hhhhHH------HHHHHHHhhhhhHHHHHHHhhhhhhhccCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 024101           91 RVAEKLARKR-SERFTY------LVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARW  163 (272)
Q Consensus        91 ~~~~~~~rk~-~er~ty------~~aa~~ss~gi~~~a~~a~y~rf~~~m~~g~~p~~eM~~~~~l~lgtfvgMEf~Aw~  163 (272)
                      -++-|+++|+ .+|.+|      .+++...++.+..+++..+|-=+..-+++.+++...+  .+.+.+.+.+..++.+|+
T Consensus        50 l~~~~~s~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~i~~eai~~l~~~~~~~~~~~--~l~v~~~s~~v~~~~~~~  127 (283)
T 3h90_A           50 LLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGV--GVIVTIVALICTIILVSF  127 (283)
T ss_dssp             HHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSCCCCCCCC--CTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcchH--HHHHHHHHHHHHHHHHHH
Confidence            4667777776 344433      3566666777777766665543333345544433221  233455566777888888


Q ss_pred             HHHH-------HHHhhhhhhhccCCCCCCCCCccchhhHhhhHHHHHHHHHhhcccCCCcchhhhhhhhhhhhhhhHHhh
Q 024101          164 AHKA-------LWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMF  236 (272)
Q Consensus       164 aHKy-------lMHG~LW~~H~sHH~pr~G~FE~NDlFaiifAvpAi~Li~~G~~~~g~~p~l~fgiGlGITlYGiaYff  236 (272)
                      .+|.       .+.+-.|+             -++|++.-+-.+.++++..+|+    .+.+-..++.+++.+...+|-+
T Consensus       128 ~~~~~~~~~s~~l~a~~~h-------------~~~D~~~s~~vli~~~~~~~g~----~~~D~i~~i~ia~~i~~~~~~l  190 (283)
T 3h90_A          128 QRWVVRRTQSQAVRADMLH-------------YQSDVMMNGAILLALGLSWYGW----HRADALFALGIGIYILYSALRM  190 (283)
T ss_dssp             HHHHHHHSCCHHHHHHHHH-------------HHHHHCCCSCSCSSSCSCSTTS----CCSTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHhCc----hHHHHHHHHHHHHHHHHHHHHH
Confidence            7764       12222222             1678877666555544433442    1222344555666666666666


Q ss_pred             hhcc
Q 024101          237 VHDG  240 (272)
Q Consensus       237 VHDg  240 (272)
                      +-|-
T Consensus       191 ~~~s  194 (283)
T 3h90_A          191 GYEA  194 (283)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6553

>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}

Probab=81.14  E-value=1.2  Score=39.53  Aligned_cols=129  Identities=19%  Similarity=0.094  Sum_probs=69.7

Q ss_pred             HHHHHHHhhhh-h-------hhHHHHHHHHHhhhhhHHHHHHHhhhhhhhccCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 024101           91 RVAEKLARKRS-E-------RFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWAR  162 (272)
Q Consensus        91 ~~~~~~~rk~~-e-------r~ty~~aa~~ss~gi~~~a~~a~y~rf~~~m~~g~~p~~eM~~~~~l~lgtfvgMEf~Aw  162 (272)
                      -++-|+++|+. +       |..| ++|+..++.+..+++..+|.=...-+++.++.-..+  .+.+.+++++.++...+
T Consensus        59 l~~~~~s~k~~d~~~pyG~~R~E~-l~al~~~~~l~~~~~~i~~eai~~l~~p~~~~~~~~--~~~v~~~~~~~~~~~~~  135 (306)
T 3j1z_P           59 FIAIRYAIVPADHDHRYGHGKAEP-LAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATL--GVVVSVVAIVLTLALVL  135 (306)
T ss_dssp             HHHHHHHTSCCCCTTSSCCTTHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTTTCCGGGTTC--CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCcccCCCchhhHHH-HHHHHHHHHHHHHHHHHHHHhhhheecCCCcccccc--chhhhhhHhhhhHHHHH
Confidence            46677777664 3       3444 456667777777777776654444455554433333  23445556677777777


Q ss_pred             HHHHHH-------HHhhhhhhhccCCCCCCCCCccchhhHhhhHHHHHHHHHhhcccCCCcchhhhhhhhhhhhhhhHHh
Q 024101          163 WAHKAL-------WHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYM  235 (272)
Q Consensus       163 ~aHKyl-------MHG~LW~~H~sHH~pr~G~FE~NDlFaiifAvpAi~Li~~G~~~~g~~p~l~fgiGlGITlYGiaYf  235 (272)
                      +.++.-       +.+-.|             --+||++.=+.++.++++..+|+    ++.+-..++.+|+.+-..+|-
T Consensus       136 ~~~~~~~~~~s~~l~a~~~-------------h~~~D~l~s~~vli~~~~~~~g~----~~~Dpi~ai~Ia~~I~~~~~~  198 (306)
T 3j1z_P          136 LQKRALAATNSTVVEADSL-------------HYKSDLFLNAAVLLALVLSQYGW----WWADGLFAVLIACYIGQQAFD  198 (306)
T ss_dssp             HHHHHHTTSCCHHHHHHHH-------------HHHHHTTCCTTCCCTTSSCCSSS----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccccCCHHHHHHHH-------------hhcchhhhhhHHHHHHHHHHhCc----chhhhHHHHHHHHHHHHHHHH
Confidence            665432       111111             12578877666666555544453    232334455555555555555


Q ss_pred             hhhc
Q 024101          236 FVHD  239 (272)
Q Consensus       236 fVHD  239 (272)
                      ++-|
T Consensus       199 l~~~  202 (306)
T 3j1z_P          199 LGYR  202 (306)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00