Citrus Sinensis ID: 024573

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLPFLF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccHHcccccEEEEEcccccccccHHHHHHHHHHccHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHccccccccccccccccEEEEEEccccccHHHHHHHHHHccccccEEEcccEEEEEcccEEEEEEEEEEccccEEEEEEEEEEEEcccEEEEEEEcccccccccccccccHHHHHHHHccccccccccHHHHHHHHcccccccccccEEEEccccc
Secondary Structure Prediction (SSPRO)
ccHHHccccccccEEcccccccccccccccEEEcccccccHHccEEEEHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHEccccccHHHHHHHHHHHHHHHcccccccccccccccEEEEEEcccccHHHHHHHHHHHHccccEEEccccEEEEEccccEEEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEEEEccccEEHcccHHHHHHHHHHHHHHHHHccccHHHHHHcccEEccccEEEEEcccccc
Coil and Loop (DISEMBL)
maslqaslpsisaiwssfpdsssinsasivtltsspandrRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVagkttnmqqidvneritglerlnptprpttspflegrwnfewfgsgspgfFVARFIferfpptlanlsnmdVVIKDGKANITANFKLLNSIESKFSFSTKllvegplrlKEEYIEGIlesptvieeTIPEQLKGAFNQAVTTVqqlpapirdaisgglriplskcfiifnlpflf
Flexible Loop (DISEMBL)
maslqaslPSISAIWSSFPDSSSINSASivtltsspandrRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVagkttnmqqidvneritglerlnptprpttspFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLPFLF
Low Complexity Region (SEG)
MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLPFLF
Disordered region (IsUnstruct)
*********************************************LRCKAMVQQAVQ*****Y*********KESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGL************PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLPFL*
Disordered Region (DISOPRED)
***************************S*******************************************AKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLPFLF
Disordered Region (DISEMBL)
********PSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLPFLF
Disordered Region (DISPRO)
******************PDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLPFLF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLPFLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
Q8S9M1	299	Probable plastid-lipid-as	no	no	0.962	0.852	0.664	2e-92
Q9M2P7	308	Probable plastid-lipid-as	no	no	0.815	0.701	0.675	5e-87

>sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 PE=1 SV=2

 Score =  338 bits (868), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/256 (66%), Positives = 194/256 (75%), Gaps = 1/256 (0%)

Query: 1   MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAP 60
           MA +  S+P  SA+   F  S+S +   +             RRR+  +AMVQ+ VQG+P
Sbjct: 1   MALIHGSVPGTSAVRLVFSTSASPSRFCLNVPVVKQGWKNSCRRRV-LRAMVQETVQGSP 59

Query: 61  AAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTT 120
             YA+EMERLSAKESLLLA KDAGGFEALV GKTTNMQ+IDVNERIT LERLNPTPRPTT
Sbjct: 60  LVYAREMERLSAKESLLLALKDAGGFEALVTGKTTNMQRIDVNERITSLERLNPTPRPTT 119

Query: 121 SPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNS 180
           SP  EGRWNFEWFGSGSPG   AR IFERFP TLANLS M+++IKD  A  TAN KLLNS
Sbjct: 120 SPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNS 179

Query: 181 IESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPI 240
           IESK   S+KL VEGPLRLKEEY+EG+LE+PTVIEE +PEQLK A  QA TT+QQLPA I
Sbjct: 180 IESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALI 239

Query: 241 RDAISGGLRIPLSKCF 256
           +D ++ GLRIPLS  F
Sbjct: 240 KDTLASGLRIPLSGSF 255

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M2P7|PAP9_ARATH Probable plastid-lipid-associated protein 9, chloroplastic OS=Arabidopsis thaliana GN=PAP9 PE=1 SV=1

 Score =  320 bits (821), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 146/216 (67%), Positives = 176/216 (81%)

Query: 44  RRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVN 103
           RR+ C+AMVQ +VQG P+ YA+EMERLSAKESL+LAF DAGGFEALV GK T+MQ+IDVN
Sbjct: 48  RRMICRAMVQDSVQGIPSVYAREMERLSAKESLILAFNDAGGFEALVTGKITDMQKIDVN 107

Query: 104 ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVV 163
           ERIT LERLNPTPRPTTSP+LEGRW+FEWFG  +PG    R +FERFP TL +LSNM++ 
Sbjct: 108 ERITNLERLNPTPRPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTLVSLSNMEIF 167

Query: 164 IKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLK 223
           IKD     TAN KLLNSIE+K + S+KL +EGPLR+KEEY+EG+LESPTVIEE +P+QL+
Sbjct: 168 IKDNNTKATANIKLLNSIENKITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLR 227

Query: 224 GAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIF 259
           G   QA TT+QQLP PI+D ++ GLRIPL   +  F
Sbjct: 228 GLLGQATTTLQQLPEPIKDTLANGLRIPLGGTYQRF 263

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
118488681	311	unknown [Populus trichocarpa]	0.932	0.794	0.724	2e-99
255579735	297	conserved hypothetical protein [Ricinus	0.977	0.872	0.692	1e-98
224137846	257	predicted protein [Populus trichocarpa]	0.796	0.821	0.792	2e-94
363807353	310	uncharacterized protein LOC100779837 [Gl	0.803	0.687	0.784	5e-94
356500445	299	PREDICTED: probable plastid-lipid-associ	0.818	0.725	0.769	4e-93
224088198	251	predicted protein [Populus trichocarpa]	0.777	0.820	0.791	1e-92
255644645	299	unknown [Glycine max]	0.818	0.725	0.764	2e-92
297824173	299	hypothetical protein ARALYDRAFT_483302 [	0.962	0.852	0.667	1e-91
373431037	314	plastid lipid-associated protein [Vitis	0.962	0.812	0.640	2e-91
30688902	270	putative plastid-lipid-associated protei	0.973	0.955	0.660	5e-91

>gi|118488681|gb|ABK96151.1| unknown [Populus trichocarpa]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 187/258 (72%), Positives = 208/258 (80%), Gaps = 11/258 (4%)

Query: 6   ASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRR------IRRRLRCKAMVQQAVQG- 58
            SLP ISA+ S      S +  S  +LT  P N RR      IRRR+ C AMVQQAVQG 
Sbjct: 13  CSLPPISALRSRL----SPSLCSFQSLTKLPENCRRSSDYRGIRRRMTCTAMVQQAVQGG 68

Query: 59  APAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRP 118
           +PA YAKEMERL+AKESLLLAFKD+GGFEALV GKTT+MQ+IDVNERITGLERLNPTPRP
Sbjct: 69  SPATYAKEMERLAAKESLLLAFKDSGGFEALVTGKTTDMQRIDVNERITGLERLNPTPRP 128

Query: 119 TTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLL 178
           TTSPFLEGRWNFEWFG+GSPG   ARFIFERFP  LANLS MDVVIKDG A +TA+ KLL
Sbjct: 129 TTSPFLEGRWNFEWFGAGSPGLSAARFIFERFPSNLANLSKMDVVIKDGNAKVTAHMKLL 188

Query: 179 NSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPA 238
            SIESKF  S+KL VEGPLR+KEEY+EGILE+PTVIEET+PEQLKGAF QA++TVQQ+P 
Sbjct: 189 YSIESKFILSSKLTVEGPLRMKEEYVEGILETPTVIEETVPEQLKGAFGQALSTVQQIPV 248

Query: 239 PIRDAISGGLRIPLSKCF 256
             RDA S GL+IPLS  F
Sbjct: 249 SFRDAFSSGLKIPLSSTF 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579735|ref|XP_002530706.1| conserved hypothetical protein [Ricinus communis] gi|223529720|gb|EEF31660.1| conserved hypothetical protein [Ricinus communis]

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 185/267 (69%), Positives = 214/267 (80%), Gaps = 8/267 (2%)

Query: 1   MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQA--VQG 58
           MAS+Q SL +I+  W S P  +S N+ +  +L S P   R   R++ CKAMVQ+A  VQG
Sbjct: 1   MASVQTSLSAIT--WRSSPSFTSANATT--SLVSFPRFTRE-NRKMTCKAMVQEAAAVQG 55

Query: 59  APAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRP 118
           APA YAK MERLSAKESLLLAFKD+GGFEALV GK T MQ+IDVNERI GLERLNPTPRP
Sbjct: 56  APATYAKAMERLSAKESLLLAFKDSGGFEALVTGKVTEMQRIDVNERIIGLERLNPTPRP 115

Query: 119 TTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLL 178
           TTSPFLEGRWNFEWFGSGSPG   ARF+FERFP +LANLS MDVVIKDG A +TA  KLL
Sbjct: 116 TTSPFLEGRWNFEWFGSGSPGLLAARFLFERFPSSLANLSKMDVVIKDGNAKVTAIMKLL 175

Query: 179 NSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPA 238
           +SIESKF  S KL VEGPLR+KEEY+EG+LE+PT+IEE++PEQLKG   QAV+TVQQLP 
Sbjct: 176 SSIESKFVLSAKLSVEGPLRMKEEYVEGMLETPTIIEESVPEQLKGVLGQAVSTVQQLPV 235

Query: 239 PIRDAISGGLRIPLSKCFI-IFNLPFL 264
           PIRDA+S GL++PLS  F  IF + +L
Sbjct: 236 PIRDAVSSGLKVPLSGSFQRIFMISYL 262

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137846|ref|XP_002322666.1| predicted protein [Populus trichocarpa] gi|222867296|gb|EEF04427.1| predicted protein [Populus trichocarpa]

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 168/212 (79%), Positives = 186/212 (87%), Gaps = 1/212 (0%)

Query: 46  LRCKAMVQQAVQG-APAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNE 104
           + C AMVQQAVQG +PA YAKEMERL+AKESLLLAFKD+GGFEALV GKTT+MQ+IDVNE
Sbjct: 1   MTCTAMVQQAVQGGSPATYAKEMERLAAKESLLLAFKDSGGFEALVTGKTTDMQRIDVNE 60

Query: 105 RITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVI 164
           RITGLERLNPTPRPTTSPFLEGRWNFEWFG+GSPG   ARFIFERFP  LANLS MDVVI
Sbjct: 61  RITGLERLNPTPRPTTSPFLEGRWNFEWFGAGSPGLSAARFIFERFPSNLANLSKMDVVI 120

Query: 165 KDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKG 224
           KDG A +TA+ KLL SIESKF  S+KL VEGPLR+KEEY+EGILE+PTVIEET+PEQLKG
Sbjct: 121 KDGNAKVTAHMKLLYSIESKFILSSKLTVEGPLRMKEEYVEGILETPTVIEETVPEQLKG 180

Query: 225 AFNQAVTTVQQLPAPIRDAISGGLRIPLSKCF 256
           AF QA++TVQQ+P   RDA S GL+IPLS  F
Sbjct: 181 AFGQALSTVQQIPVSFRDAFSSGLKIPLSSTF 212

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807353|ref|NP_001242119.1| uncharacterized protein LOC100779837 [Glycine max] gi|255641773|gb|ACU21156.1| unknown [Glycine max]

 Score =  349 bits (896), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 167/213 (78%), Positives = 184/213 (86%)

Query: 44  RRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVN 103
           +R  C+AMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALV+GKTT  Q+IDVN
Sbjct: 53  KRWGCRAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVSGKTTEWQKIDVN 112

Query: 104 ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVV 163
           ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPG F ARFIFE FP TLANLS MD V
Sbjct: 113 ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGLFAARFIFETFPSTLANLSKMDFV 172

Query: 164 IKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLK 223
           IKDG A ITAN +LLNSIE+K   STKL VEGPLR+KEEY+EG+  +PT+IEE +PEQLK
Sbjct: 173 IKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEGVFVTPTIIEERVPEQLK 232

Query: 224 GAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCF 256
           GA  QA   +QQLPAPIRD ++ GL++PLS  F
Sbjct: 233 GALGQAANALQQLPAPIRDPVASGLKVPLSGSF 265

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500445|ref|XP_003519042.1| PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic-like [Glycine max]

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 167/217 (76%), Positives = 185/217 (85%)

Query: 40  RRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQ 99
           R   +R  C+AMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALV+GKTT  Q+
Sbjct: 38  RGSNKRSGCRAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVSGKTTEWQK 97

Query: 100 IDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
           IDVNERITGLERLNPTPRPTTSPFLEG+WNFEWFGSGSPG F ARFIFE FP TLANLS 
Sbjct: 98  IDVNERITGLERLNPTPRPTTSPFLEGQWNFEWFGSGSPGLFAARFIFEIFPSTLANLSK 157

Query: 160 MDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIP 219
           MDVVIKDG A ITAN +LLNSIE+K   STKL VEGPLR+KEEY+EG+L +PT+IEE +P
Sbjct: 158 MDVVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEGVLVTPTIIEERVP 217

Query: 220 EQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCF 256
           EQLKGA  QA   +QQLP PI D ++ GL++PLS  F
Sbjct: 218 EQLKGALGQAANALQQLPTPIWDPVASGLKVPLSGSF 254

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088198|ref|XP_002308366.1| predicted protein [Populus trichocarpa] gi|222854342|gb|EEE91889.1| predicted protein [Populus trichocarpa]

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 163/206 (79%), Positives = 180/206 (87%)

Query: 51  MVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLE 110
           MVQQAV G+PA YAKEMERLSAKESLLLAFKD+G FEALV G+TT+MQ+IDVNERI GLE
Sbjct: 1   MVQQAVHGSPAIYAKEMERLSAKESLLLAFKDSGSFEALVTGQTTDMQRIDVNERINGLE 60

Query: 111 RLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKAN 170
           RLNPTPRPTTSPFLEGRWNFEWFG+GSPG F ARFIFERFP   ANLS MD+VIKDG A 
Sbjct: 61  RLNPTPRPTTSPFLEGRWNFEWFGAGSPGLFAARFIFERFPKNFANLSKMDMVIKDGNAK 120

Query: 171 ITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAV 230
           +TAN KLL SIESKF   +KL VEGPLR+KEEY+EGILE+PT+IEET+PEQLKGAF QAV
Sbjct: 121 VTANMKLLYSIESKFILLSKLTVEGPLRMKEEYVEGILETPTIIEETVPEQLKGAFGQAV 180

Query: 231 TTVQQLPAPIRDAISGGLRIPLSKCF 256
            TVQQLP PIRD+ S GL+IPL+  F
Sbjct: 181 HTVQQLPVPIRDSFSSGLKIPLTSTF 206

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644645|gb|ACU22825.1| unknown [Glycine max]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 166/217 (76%), Positives = 184/217 (84%)

Query: 40  RRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQ 99
           R   +R  C+AMVQQAVQGAPAAYAKEMERLSAKESL LAFKDAGGFEALV+GKTT  Q+
Sbjct: 38  RGSNKRSGCRAMVQQAVQGAPAAYAKEMERLSAKESLFLAFKDAGGFEALVSGKTTEWQK 97

Query: 100 IDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
           IDVNERITGLERLNPTPRPTTSPFLEG+WNFEWFGSGSPG F ARFIFE FP TLANLS 
Sbjct: 98  IDVNERITGLERLNPTPRPTTSPFLEGQWNFEWFGSGSPGLFAARFIFEIFPSTLANLSK 157

Query: 160 MDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIP 219
           MDVVIKDG A ITAN +LLNSIE+K   STKL VEGPLR+KEEY+EG+L +PT+IEE +P
Sbjct: 158 MDVVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEGVLVTPTIIEERVP 217

Query: 220 EQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCF 256
           EQLKGA  QA   +QQLP PI D ++ GL++PLS  F
Sbjct: 218 EQLKGALGQAANALQQLPTPIWDPVASGLKVPLSGSF 254

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824173|ref|XP_002879969.1| hypothetical protein ARALYDRAFT_483302 [Arabidopsis lyrata subsp. lyrata] gi|297325808|gb|EFH56228.1| hypothetical protein ARALYDRAFT_483302 [Arabidopsis lyrata subsp. lyrata]

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 171/256 (66%), Positives = 196/256 (76%), Gaps = 1/256 (0%)

Query: 1   MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAP 60
           MA L  S+P  SA+   F  S+S +   +             RRR+  +AMVQ+ V G+P
Sbjct: 1   MALLHGSIPGTSAVRLGFSTSASPSKVCLNVPVVKQGWRNSCRRRV-LRAMVQETVLGSP 59

Query: 61  AAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTT 120
           + YA+EMERLSAKESL+LA KDAGGFEALV GKTTNMQ+IDVNERIT LERLNPTPRPTT
Sbjct: 60  SVYAREMERLSAKESLVLALKDAGGFEALVTGKTTNMQRIDVNERITSLERLNPTPRPTT 119

Query: 121 SPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNS 180
           SP  EGRWNFEWFGSGSPG   AR IFERFP TLANLS M+++IKD  A  TAN KLLNS
Sbjct: 120 SPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNS 179

Query: 181 IESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPI 240
           IESK   S+KL VEGPLRLKEEY+EG+LESPTVIEE +PEQLKGA +QA TT+QQLPA I
Sbjct: 180 IESKIILSSKLTVEGPLRLKEEYVEGMLESPTVIEEAVPEQLKGALSQAATTLQQLPALI 239

Query: 241 RDAISGGLRIPLSKCF 256
           +D ++ GLRIPLS  F
Sbjct: 240 KDTLASGLRIPLSCSF 255

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|373431037|gb|AEY70471.1| plastid lipid-associated protein [Vitis pseudoreticulata]

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 173/270 (64%), Positives = 206/270 (76%), Gaps = 15/270 (5%)

Query: 1   MASLQASLPSISAIWS-----SFPDSSSINSASIVTLTSSPANDRRI---RRRLR----- 47
           MA +Q   P+ SAI +       P S+S+  AS+V++++   N RR+   RR  R     
Sbjct: 1   MALVQGIAPATSAIRTPRSLLYSPHSASL-IASLVSVSAPLENGRRVLVGRRFGRISEAR 59

Query: 48  -CKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERI 106
            C+AMVQQA QGAPA YAKEMERLSAKESLLLAFKD+GGFEALV GKTT MQ IDVNERI
Sbjct: 60  VCRAMVQQAAQGAPATYAKEMERLSAKESLLLAFKDSGGFEALVTGKTTEMQSIDVNERI 119

Query: 107 TGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKD 166
           TGLERLNPTPRPTTSP+LEG+WN EWFG+G PG   ARF+F+ FP  LANLS +DVVIKD
Sbjct: 120 TGLERLNPTPRPTTSPYLEGQWNLEWFGTGKPGSLAARFLFQIFPSALANLSKVDVVIKD 179

Query: 167 GKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAF 226
                T N KLLNS+ESK   +++L VEGPLRLKEEY+E +LESP V+EE++PEQLKGAF
Sbjct: 180 SYGKTTVNLKLLNSVESKIVLNSRLSVEGPLRLKEEYVEAVLESPKVVEESVPEQLKGAF 239

Query: 227 NQAVTTVQQLPAPIRDAISGGLRIPLSKCF 256
            QAV+T QQLP P++DAIS GL+IPL+  F
Sbjct: 240 GQAVSTAQQLPVPVKDAISSGLKIPLNGRF 269

Source: Vitis pseudoreticulata

Species: Vitis pseudoreticulata

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30688902|ref|NP_850362.1| putative plastid-lipid-associated protein 13 [Arabidopsis thaliana] gi|18491295|gb|AAL69472.1| At2g42130/T24P15.4 [Arabidopsis thaliana] gi|330254980|gb|AEC10074.1| putative plastid-lipid-associated protein 13 [Arabidopsis thaliana]

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 171/259 (66%), Positives = 195/259 (75%), Gaps = 1/259 (0%)

Query: 1   MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAP 60
           MA +  S+P  SA+   F  S+S +   +             RRR+  +AMVQ+ VQG+P
Sbjct: 1   MALIHGSVPGTSAVRLVFSTSASPSRFCLNVPVVKQGWKNSCRRRV-LRAMVQETVQGSP 59

Query: 61  AAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTT 120
             YA+EMERLSAKESLLLA KDAGGFEALV GKTTNMQ+IDVNERIT LERLNPTPRPTT
Sbjct: 60  LVYAREMERLSAKESLLLALKDAGGFEALVTGKTTNMQRIDVNERITSLERLNPTPRPTT 119

Query: 121 SPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNS 180
           SP  EGRWNFEWFGSGSPG   AR IFERFP TLANLS M+++IKD  A  TAN KLLNS
Sbjct: 120 SPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNS 179

Query: 181 IESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPI 240
           IESK   S+KL VEGPLRLKEEY+EG+LE+PTVIEE +PEQLK A  QA TT+QQLPA I
Sbjct: 180 IESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALI 239

Query: 241 RDAISGGLRIPLSKCFIIF 259
           +D ++ GLRIPLSK    F
Sbjct: 240 KDTLASGLRIPLSKLLYPF 258

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
TAIR|locus:2060020	299	AT2G42130 [Arabidopsis thalian	0.962	0.852	0.664	9.1e-84
TAIR|locus:2095803	308	PGL34 "plastoglobulin 34kD" [A	0.950	0.818	0.613	2.6e-79
TAIR|locus:2136627	318	FIB "fibrillin" [Arabidopsis t	0.713	0.594	0.224	0.00043

TAIR|locus:2060020 AT2G42130 [Arabidopsis thaliana (taxid:3702)]

 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 170/256 (66%), Positives = 194/256 (75%)

Query:     1 MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAP 60
             MA +  S+P  SA+   F  S+S +   +             RRR+  +AMVQ+ VQG+P
Sbjct:     1 MALIHGSVPGTSAVRLVFSTSASPSRFCLNVPVVKQGWKNSCRRRV-LRAMVQETVQGSP 59

Query:    61 AAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTT 120
               YA+EMERLSAKESLLLA KDAGGFEALV GKTTNMQ+IDVNERIT LERLNPTPRPTT
Sbjct:    60 LVYAREMERLSAKESLLLALKDAGGFEALVTGKTTNMQRIDVNERITSLERLNPTPRPTT 119

Query:   121 SPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNS 180
             SP  EGRWNFEWFGSGSPG   AR IFERFP TLANLS M+++IKD  A  TAN KLLNS
Sbjct:   120 SPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNS 179

Query:   181 IESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPI 240
             IESK   S+KL VEGPLRLKEEY+EG+LE+PTVIEE +PEQLK A  QA TT+QQLPA I
Sbjct:   180 IESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALI 239

Query:   241 RDAISGGLRIPLSKCF 256
             +D ++ GLRIPLS  F
Sbjct:   240 KDTLASGLRIPLSGSF 255

GO:0005198 "structural molecule activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

TAIR|locus:2095803 PGL34 "plastoglobulin 34kD" [Arabidopsis thaliana (taxid:3702)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 157/256 (61%), Positives = 198/256 (77%)

Query:     1 MASLQ-ASLPSISAIWSSFPDSSSINSAS--IVTLTSSPANDRR-IRRRLRCKAMVQQAV 56
             MA +Q  S+   SA+  SF  S S  S+S  +  ++ +  ++++   RR+ C+AMVQ +V
Sbjct:     1 MALIQHGSVSGTSAVRLSFSSSVSPPSSSPPLSRVSLNFQSEKKSCYRRMICRAMVQDSV 60

Query:    57 QGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTP 116
             QG P+ YA+EMERLSAKESL+LAF DAGGFEALV GK T+MQ+IDVNERIT LERLNPTP
Sbjct:    61 QGIPSVYAREMERLSAKESLILAFNDAGGFEALVTGKITDMQKIDVNERITNLERLNPTP 120

Query:   117 RPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFK 176
             RPTTSP+LEGRW+FEWFG  +PG    R +FERFP TL +LSNM++ IKD     TAN K
Sbjct:   121 RPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTLVSLSNMEIFIKDNNTKATANIK 180

Query:   177 LLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQL 236
             LLNSIE+K + S+KL +EGPLR+KEEY+EG+LESPTVIEE +P+QL+G   QA TT+QQL
Sbjct:   181 LLNSIENKITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLRGLLGQATTTLQQL 240

Query:   237 PAPIRDAISGGLRIPL 252
             P PI+D ++ GLRIPL
Sbjct:   241 PEPIKDTLANGLRIPL 256

GO:0005198 "structural molecule activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

TAIR|locus:2136627 FIB "fibrillin" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
 Identities = 46/205 (22%), Positives = 88/205 (42%)

Query:    65 KEMERLSAKESLLLAFKDA--GGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSP 122
             K +E +   E L  +  D+  G    L     T   + +++E IT LE  NPTP P  + 
Sbjct:    83 KAIESVEETERLKRSLADSLYGTDRGLSVSSDT---RAEISELITQLESKNPTPAPNEAL 139

Query:   123 FL-EGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSI 181
             FL  G+W   +  +   G F    +  R  P L  +  +   I      +  + +     
Sbjct:   140 FLLNGKWILAY--TSFVGLFP--LLSRRIEP-LVKVDEISQTIDSDSFTVQNSVRFAGPF 194

Query:   182 ES-KFSFSTKLLVEGPLRLKEEYIEGILESPTVIEET-IPEQLKGAFNQAV--TTVQQLP 237
              +  FS + K  +  P R++ ++ +G++ +P + +   IPE ++    Q +    ++ L 
Sbjct:   195 STTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVE-VLGQKIDLNPIKGLL 253

Query:   238 APIRDAISGGLRIPLSKCFIIFNLP 262
               ++D  S   R   ++  + F+LP
Sbjct:   254 TSVQDTASSVARTISNQPPLKFSLP 278


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      265       265   0.00093  114 3  11 22  0.46    33
                                                     32  0.50    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  172 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.69u 0.10s 24.79t   Elapsed:  00:00:01
  Total cpu time:  24.69u 0.10s 24.79t   Elapsed:  00:00:01
  Start:  Mon May 20 16:15:12 2013   End:  Mon May 20 16:15:13 2013

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010205 "photoinhibition" evidence=IMP

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	265
pfam04755	196	pfam04755, PAP_fibrillin, PAP_fibrillin	9e-04

>gnl|CDD|218245 pfam04755, PAP_fibrillin, PAP_fibrillin

 Score = 39.0 bits (91), Expect = 9e-04
 Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 20/152 (13%)

Query: 98  QQIDVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARFIFERFPPTLAN 156
            + ++   +T LE LNPTP PT S   L G+W   +  + S        +     P L  
Sbjct: 24  DRAEIESAVTQLEALNPTPAPTESLDLLNGKWRLLY--TTSKELL--PLLARGRLPLLKV 79

Query: 157 LSNMDVVIKDGKANITANFKLLNSIE-----SKFSFST--KLLVEGPLRLKEEYIEGILE 209
                 +          N  + NS+      ++ SFS   K  +  P R++  +  G+L 
Sbjct: 80  GQIYQTI-------DVNNLTVYNSVTFSGPLAEGSFSVRAKFEIRSPKRVQIRFERGVLG 132

Query: 210 SPTVIEETIPEQLKGAFNQAVTTVQQLPAPIR 241
           +P +++ ++      A N    +  QLP P  
Sbjct: 133 TPQLLKGSLTPLQDTASNIRGISS-QLPLPFP 163

This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins. Length = 196

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
PF04755	198	PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843	99.96

>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle

Probab=99.96  E-value=5.2e-28  Score=202.70  Aligned_cols=163  Identities=26%  Similarity=0.454  Sum_probs=129.2

Q ss_pred             hHHHHHHHHhhh-cCCceeeecCCCChhhHHHHHHHHHhhhhcCCCCCCCCC-CccCceEEEEEeccCCCchhhhhhhhc
Q 024573           71 SAKESLLLAFKD-AGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFE  148 (265)
Q Consensus        71 saKe~Ll~a~~d-~rG~~A~~~g~~t~~~R~eI~eli~~LEalNPTP~Pt~s-~lL~G~W~LlyTss~spgLla~rl~~~  148 (265)
                      ++|++|++++++ .||..|      ++++|.+|+++|.+||++||||+|+++ ++|+|+|+|.||++.  +.... +-.+
T Consensus         2 ~~K~~Ll~~~~~~~rG~~~------~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~--~~~~~-l~~~   72 (198)
T PF04755_consen    2 DLKQELLQAVAGTNRGLRA------SPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSP--EIRSL-LQRG   72 (198)
T ss_pred             hHHHHHHHHHhccCCCccC------CHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCC--Ccccc-cccc
Confidence            689999999999 589988      999999999999999999999999998 799999999999987  33322 2335


Q ss_pred             cCCcccccccceEEEEeCCceEEEEeeee--eccceeEEEEEEeeEEeCCeeeEEEEeeeeecCceeecccChhhHHHhh
Q 024573          149 RFPPTLANLSNMDVVIKDGKANITANFKL--LNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAF  226 (265)
Q Consensus       149 rlPs~Lv~Lg~I~~~I~~~~~~~~a~v~~--l~~less~SvsAkFEVrSP~RvqvkFeEGilgtP~lie~~lPeqv~~~l  226 (265)
                      ++|  .+.+++|+|+||....++.|.+.+  ++.+++.+++.++|++.+|.||+++|+++.++.|.+        +++++
T Consensus        73 ~~~--~~~~~~v~Q~id~~~~~~~N~v~~~~~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~--------l~~~l  142 (198)
T PF04755_consen   73 RLP--GVRVGRVFQTIDADNGRVENVVELSGFPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSL--------LKGVL  142 (198)
T ss_pred             ccc--cccccceEEEEECCCceEEEEEEEeccCceEEEEEEEEEEEEccccEEEEEEEeeEEcccce--------eeccc
Confidence            677  689999999998877666666665  566799999999999999999999999999999998        33444


Q ss_pred             ccccchhhccChhhHhhhcCCeeecCCc
Q 024573          227 NQAVTTVQQLPAPIRDAISGGLRIPLSK  254 (265)
Q Consensus       227 GQ~i~~lq~l~~~i~~~is~pLKvPl~g  254 (265)
                      ++.-+..+.++....+..  |+++|+++
T Consensus       143 ~~~~~~~~~v~~~~~~~~--~~~~~~~~  168 (198)
T PF04755_consen  143 GPLKDALNNVPRGISDEL--PVPLPLPG  168 (198)
T ss_pred             hhhhhhhhhccccccccc--ccccccCC
Confidence            444445555443333222  44455543

The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00