Citrus Sinensis ID: 024680

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
Protein Sequence
MLSSCSHSLSHRPIVLPSISKLRVSSRPSSSSLSRTSRIFDSTLKLTRNKWKISCFRHEEISPENSKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAYW
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHccccccccccccccccccHHHHHHHccccccEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccEcccccccccccccccccccccccccccEEEEEEEcccccccccccccHHcccHHHHccccccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mlsscshslshrpivlpsisklrvssrpsssslsrtsrifdSTLKLTRNKWkiscfrheeispenskpesiehfvqdelvkpeidqsnpikrdWATTLREAADGVLRAIgsrwtvpwTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRClsrfhplpsdwfrfslkgnwqLDVALGCLMFPLVNRlsqfnlnllplmpsapvtiSSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFrgfllpsltkympvwcayw
Flexible Loop (DISEMBL)
mlsscshslshrpivlpsisklrvssrpsssslsrtsrifdstlkltrnKWKISCFRheeispenskpesIEHFVQDElvkpeidqsnpikrdwATTLREAADGVLRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRgfllpsltkympvwcAYW
Low Complexity Region (SEG)
MLSSCSHSLSHRPIVLPsisklrvssrpsssslsrtsrifdsTLKLTRNKWKISCFRHEEISPENSKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAYW
Disordered region (IsUnstruct)
**************************************IFDSTLKLTRNKWKISCFR********************************IKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAYW
Disordered Region (DISOPRED)
**************************************************WKISCFRHE*****************************PIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNL*************VEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAYW
Disordered Region (DISEMBL)
**********HRPIVLPSISK**************TSRIFDSTLKLTRNKWKISCFRHE**********SIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAYW
Disordered Region (DISPRO)
*************I*LPSISKLRVSSRPSSSSLSRTSRIFDSTLKLTRNKWKISCFRHE************EHFVQDELVKP*IDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAYW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLSSCSHSLSHRPIVLPSISKLRVSSRPSSSSLSRTSRIFDSTLKLTRNKWKISCFRHEEISPENSKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAYW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
224075030	343	predicted protein [Populus trichocarpa]	0.965	0.743	0.681	1e-104
225426098	347	PREDICTED: uncharacterized protein LOC10	0.992	0.755	0.643	1e-100
255537635	355	prenyl-dependent CAAX protease, putative	0.946	0.704	0.671	1e-100
224053831	300	predicted protein [Populus trichocarpa]	0.810	0.713	0.708	5e-92
356528859	341	PREDICTED: uncharacterized protein LOC10	0.973	0.753	0.593	2e-89
356513325	341	PREDICTED: uncharacterized protein LOC10	0.973	0.753	0.586	1e-87
297793631	347	CAAX amino terminal protease family prot	0.943	0.717	0.607	5e-85
359490443	378	PREDICTED: uncharacterized protein LOC10	0.992	0.693	0.549	5e-84
18424393	347	CAAX amino terminal protease family prot	0.935	0.711	0.601	2e-83
449456345	366	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.969	0.699	0.537	2e-80

>gi|224075030|ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|222841958|gb|EEE79505.1| predicted protein [Populus trichocarpa]

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/283 (68%), Positives = 223/283 (78%), Gaps = 28/283 (9%)

Query: 8   SLSHRPIVLPSISKLRVSSRPSSSSL--SRTSRIFDSTLKLTRNKWKISCFRHEEISPEN 65
           SLS +PI+ PSI KLRV +RP +SSL  +R +RIF+S  KL ++KW++SCFR+EEIS  N
Sbjct: 3   SLSQQPILTPSIPKLRVFNRPRNSSLFAARNNRIFESNSKLPKHKWRVSCFRNEEISQVN 62

Query: 66  SKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQV 125
              +S+E +V +ELVKPE+D S  +KRDW ++LREAA+ VLRA GS WTVPWTAETI+QV
Sbjct: 63  PGSDSVERYVPEELVKPELDNSTNVKRDWISSLREAANVVLRAFGSSWTVPWTAETIVQV 122

Query: 126 MLLWVAAFWFIGSWVIPFAAHVAG--------------------------IAILHRCLSR 159
           MLLWV +FWFIGSW+IPFAAH+AG                          IAILH CLSR
Sbjct: 123 MLLWVVSFWFIGSWLIPFAAHIAGFNKESLTFRGQALFSLVTDVTEGLAGIAILHCCLSR 182

Query: 160 FHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIM 219
           FHPL SDWFRF LKGNW  DVALGCLMFPLVNRLSQFNL+LLP++PS PVT+SSVEQSI 
Sbjct: 183 FHPLSSDWFRFRLKGNWLFDVALGCLMFPLVNRLSQFNLSLLPILPSTPVTLSSVEQSIA 242

Query: 220 ARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           ARDPVAM LYAIVVSVCAPVWEEIVFRGFLLPSLT+YMPVWCA
Sbjct: 243 ARDPVAMVLYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCA 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426098|ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250094 [Vitis vinifera] gi|297742264|emb|CBI34413.3| unnamed protein product [Vitis vinifera]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/289 (64%), Positives = 220/289 (76%), Gaps = 27/289 (9%)

Query: 1   MLSSCSHSLSHRPIVLPSISKLRVSSRPSS-SSLSRTSRIFDSTLKLTRNKWKISCFRHE 59
           M SSCSH+LS  P + P+IS+LR+ +RP +   LS   RI +S  K  ++KWKISCFRHE
Sbjct: 1   MWSSCSHALSRCPSLPPTISRLRLPNRPGTLYPLSSGFRISESHSKFPKSKWKISCFRHE 60

Query: 60  EISPENSKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTA 119
           + S E  K ESI+  +  ELVKPE ++ + +++DWA++ REAAD +LR IG  W VPWT+
Sbjct: 61  DSSSETPKSESIDDILSGELVKPEFNKPSTVQKDWASSFREAADVILRVIGKPWVVPWTS 120

Query: 120 ETILQVMLLWVAAFWFIGSWVIPFAAHV--------------------------AGIAIL 153
           ETILQVMLLW+ +FWF+GSW+IPF AHV                          AGIAIL
Sbjct: 121 ETILQVMLLWIVSFWFVGSWMIPFTAHVVGFSKESLTYRGQALYSLLTDVAEGLAGIAIL 180

Query: 154 HRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISS 213
           HRCLSRF PLPSDWFRFSL+GNW  DVA+GCLMFPLVNRLSQFNL+LLPL+PS PVT+SS
Sbjct: 181 HRCLSRFSPLPSDWFRFSLRGNWLADVAIGCLMFPLVNRLSQFNLDLLPLLPSTPVTLSS 240

Query: 214 VEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           VEQSIMARDPVAM LYA+VVSVCAPVWEEIVFRGFLLPSLTKYMPVWC+
Sbjct: 241 VEQSIMARDPVAMGLYALVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCS 289

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537635|ref|XP_002509884.1| prenyl-dependent CAAX protease, putative [Ricinus communis] gi|223549783|gb|EEF51271.1| prenyl-dependent CAAX protease, putative [Ricinus communis]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/283 (67%), Positives = 222/283 (78%), Gaps = 33/283 (11%)

Query: 13  PIVLPSISKLRVSSRPSSSS---LSRTSRIFDSTLKLTRNKWKISCFRHEEISPENSKPE 69
           PI+LPSIS++RV +RP   S   ++R  RIF+S+ KL++NKWKISCF+HE+ SP N K +
Sbjct: 15  PILLPSISRVRVINRPGILSPPLVTRNVRIFESSSKLSKNKWKISCFKHEDFSPVNPKSD 74

Query: 70  SIEHFVQDELVK-PEIDQ-SNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVML 127
            +EH + ++L K PE+D  S  +KRDW TTL+EAA  V +AIGS+WTVPWTAETI+QVML
Sbjct: 75  DVEHCLPEKLAKQPELDNNSTDVKRDWITTLQEAAGVVFQAIGSQWTVPWTAETIIQVML 134

Query: 128 LWVAAFWFIGSWVIPFAAHVAG--------------------------IAILHRCLSRFH 161
           LWV +FWFIGSWVIPFAAH+AG                          IAILHRCLSRF 
Sbjct: 135 LWVVSFWFIGSWVIPFAAHIAGFNKESLTFRGQALFSLVTDVTEGLAGIAILHRCLSRFC 194

Query: 162 PLPSDWFRFSLKGNWQ--LDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIM 219
           PLPSDWFRFSLKGNW   LDVALGC MFPL+NRLSQ NL+LLP++PSAPVT+SSVEQSI 
Sbjct: 195 PLPSDWFRFSLKGNWAWLLDVALGCFMFPLINRLSQVNLSLLPILPSAPVTLSSVEQSIA 254

Query: 220 ARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           ARDPVAMALYAIVVSVCAPVWEEI+FRGFLLPSLT+YMPVWCA
Sbjct: 255 ARDPVAMALYAIVVSVCAPVWEEILFRGFLLPSLTRYMPVWCA 297

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053831|ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|222845259|gb|EEE82806.1| predicted protein [Populus trichocarpa]

 Score =  343 bits (879), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 170/240 (70%), Positives = 189/240 (78%), Gaps = 26/240 (10%)

Query: 49  NKWKISCFRHEEISPENSKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRA 108
            KW+IS FR+EEIS  N   +S+E +V +ELVKPE+D S  ++ DW ++LREAA  VLRA
Sbjct: 3   QKWRISFFRNEEISQVNPGSDSVERYVPEELVKPELDNSTNVEGDWISSLREAAHVVLRA 62

Query: 109 IGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAG------------------- 149
            GSRWTVPWTAETI+QVMLLWV +FWFIGSWVIPFAAH+AG                   
Sbjct: 63  FGSRWTVPWTAETIVQVMLLWVVSFWFIGSWVIPFAAHIAGFNKESLTFRGQALFSLVTD 122

Query: 150 -------IAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLP 202
                  IAILHRCLSRF PL SDWFRF LKGNW  DVALGCLMFPLVNRLSQFNL+LLP
Sbjct: 123 VTEGLAGIAILHRCLSRFRPLSSDWFRFRLKGNWVFDVALGCLMFPLVNRLSQFNLSLLP 182

Query: 203 LMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           ++PS PVT+SSVEQSI ARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLT+YMPVWCA
Sbjct: 183 ILPSTPVTLSSVEQSIAARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCA 242

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528859|ref|XP_003533015.1| PREDICTED: uncharacterized protein LOC100814248 [Glycine max]

 Score =  334 bits (856), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 171/288 (59%), Positives = 202/288 (70%), Gaps = 31/288 (10%)

Query: 1   MLSSCSHSLSHRPIVLPSISKLRVSSRPSSSSLSRTSRIFDSTLKLTRNKWKISCFRHEE 60
           MLS+ S+S+  R  +   I  +     P  ++L     I +S  K  +N+  I CFRH+ 
Sbjct: 1   MLSTSSYSVFTRSFLPNPIKGI-----PRPATLRPFPGILESHAKSPKNRLSILCFRHDH 55

Query: 61  ISPENSKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAE 120
            SPE  +PE IEH++ +ELV+ E + S+  KRDW +T+++AA+ V + IG RW VPW A 
Sbjct: 56  HSPETPQPEVIEHYLHEELVQSEFNDSSVTKRDWKSTIQKAANEVFKVIGYRWVVPWNAM 115

Query: 121 TILQVMLLWVAAFWFIGSWVIPFAAHV--------------------------AGIAILH 154
           TILQVMLLW  AFWFIGSW+IPFAAH+                          AG+AIL 
Sbjct: 116 TILQVMLLWTTAFWFIGSWMIPFAAHITGFSKESLTFRGQALFSLVTDVTEGLAGVAILL 175

Query: 155 RCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSV 214
           RCLSRF PLP DWF FSLKGNWQLDV +GCLMFPLVNRLSQFNL+LLPL+PS PVT+SSV
Sbjct: 176 RCLSRFRPLPPDWFEFSLKGNWQLDVIMGCLMFPLVNRLSQFNLDLLPLLPSTPVTLSSV 235

Query: 215 EQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           EQSI ARDPVAM LYA VVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA
Sbjct: 236 EQSIRARDPVAMLLYATVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513325|ref|XP_003525364.1| PREDICTED: uncharacterized protein LOC100779061 [Glycine max]

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 169/288 (58%), Positives = 200/288 (69%), Gaps = 31/288 (10%)

Query: 1   MLSSCSHSLSHRPIVLPSISKLRVSSRPSSSSLSRTSRIFDSTLKLTRNKWKISCFRHEE 60
           MLS+ S+ +  R   LP+     +   P  ++L    RI +S  K  +N+  I CFRH+ 
Sbjct: 1   MLSTSSYCVFTRSF-LPN----PIKGFPRPATLRPFPRILESHAKSPKNRLSILCFRHDH 55

Query: 61  ISPENSKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAE 120
             PE  +PE IEH++ +ELV+ E + S+  KRDW + +++AA+ V + IG  W VPW A 
Sbjct: 56  HYPETPQPEVIEHYLHEELVQSEFNDSSVTKRDWKSAIQKAANEVFKVIGYGWVVPWNAM 115

Query: 121 TILQVMLLWVAAFWFIGSWVIPFAAHV--------------------------AGIAILH 154
           TILQVMLLW  AFWFIGSW+IPFAAH+                          AG+AIL 
Sbjct: 116 TILQVMLLWTTAFWFIGSWMIPFAAHITGFSKESLTFRGQALFSLVTDVTEGLAGVAILL 175

Query: 155 RCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSV 214
           RCLSRF PLP DWF+FSLKG WQLDV  GCLMFPLVNRLSQFNL+LLPL+PS PVT+SSV
Sbjct: 176 RCLSRFRPLPPDWFKFSLKGYWQLDVITGCLMFPLVNRLSQFNLDLLPLLPSTPVTLSSV 235

Query: 215 EQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           EQSIMARDPVAM LYA VVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA
Sbjct: 236 EQSIMARDPVAMLLYATVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297793631|ref|XP_002864700.1| CAAX amino terminal protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297310535|gb|EFH40959.1| CAAX amino terminal protease family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 172/283 (60%), Positives = 201/283 (71%), Gaps = 34/283 (12%)

Query: 9   LSHRPIVLPSISKLRVSSRPS-SSSLSRTSRIFDST-LKLTRNKWKISCFRHEEISPENS 66
           L HRP +  S SK RV  R   S +L++ S +  S+  K  ++KWKI CFR+E+ +PENS
Sbjct: 12  LRHRPALSSSRSKFRVPRRTVFSPALTKISPLTASSPSKSAKHKWKILCFRNEDSAPENS 71

Query: 67  KPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVM 126
                EHFV +ELVKP+ D     K+DW  TL++AAD VL+AIG+RW VPWT ETI+QVM
Sbjct: 72  -----EHFVPEELVKPDQDSPCTDKKDWKATLQKAADTVLKAIGTRWKVPWTVETIVQVM 126

Query: 127 LLWVAAFWFIGSWVIPFAAHV--------------------------AGIAILHRCLSRF 160
           LLWVAAFWFIGSW+IPF AH+                          AGIAILHRCLS F
Sbjct: 127 LLWVAAFWFIGSWMIPFMAHISGFHKESLTFRGQALFSLITDVTEGLAGIAILHRCLSMF 186

Query: 161 HPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQ-FNLNLLPLMPSAPVTISSVEQSIM 219
            PL SDWFRF+LKGNWQLDV +GC MFP VNRLSQ     L     S+PV++SSVEQSIM
Sbjct: 187 RPLASDWFRFTLKGNWQLDVIIGCFMFPFVNRLSQLNLNLLPLPPTSSPVSLSSVEQSIM 246

Query: 220 ARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           ARDPVAMALYA+VVS+CAPVWEEIVFRGFLLPSLT+YMPVWCA
Sbjct: 247 ARDPVAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMPVWCA 289

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490443|ref|XP_002275682.2| PREDICTED: uncharacterized protein LOC100254162 [Vitis vinifera]

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 160/291 (54%), Positives = 205/291 (70%), Gaps = 29/291 (9%)

Query: 1   MLSSCSHSLSHRP-IVLPSISKLRVSSRPSSS-SLSRTSRIFDSTLKLTRNKWKISCFRH 58
           M + C  +LSH P ++ P IS++R+S+ P +S SL++  RI D+  + ++NKW+ SC R 
Sbjct: 30  MSAPCCRTLSHYPSLISPPISRIRISNLPRTSLSLNQRFRIVDTLSRYSKNKWRGSCHRQ 89

Query: 59  EEISPENSKPESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSR-WTVPW 117
           EE S E  + E++E  + +EL KPE++QS+ +K+D  + +R+A        G + WTVPW
Sbjct: 90  EESSAEIPEFETVEDKLPEELAKPEVEQSDKLKKDCVSKVRKALKAADAFFGMKPWTVPW 149

Query: 118 TAETILQVMLLWVAAFWFIGSWVIPFAAHVAG--------------------------IA 151
           TA TILQVMLLW+A+FW +GSW+IPF AH AG                          IA
Sbjct: 150 TAMTILQVMLLWIASFWLVGSWIIPFLAHKAGFRKETMTHRGQALYGLLGEVTEGLSGIA 209

Query: 152 ILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMPSAPVTI 211
           ILH CL+RFHPLPSDWFR SL+G W  DV LGCLMFPLVNRLSQ N NLLP+ PS PVT 
Sbjct: 210 ILHICLARFHPLPSDWFRLSLEGKWHFDVGLGCLMFPLVNRLSQINENLLPVAPSTPVTG 269

Query: 212 SSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           SSV+QSI+ARDP+AMALYA+ +SVCAP+WEEI FRGFLLPSLT+YMPVWC+
Sbjct: 270 SSVQQSIVARDPLAMALYAVFLSVCAPIWEEIFFRGFLLPSLTRYMPVWCS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424393|ref|NP_568928.1| CAAX amino terminal protease family protein [Arabidopsis thaliana] gi|17528994|gb|AAL38707.1| unknown protein [Arabidopsis thaliana] gi|20465443|gb|AAM20181.1| unknown protein [Arabidopsis thaliana] gi|21554615|gb|AAM63634.1| unknown [Arabidopsis thaliana] gi|332009990|gb|AED97373.1| CAAX amino terminal protease family protein [Arabidopsis thaliana]

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 169/281 (60%), Positives = 197/281 (70%), Gaps = 34/281 (12%)

Query: 11  HRPIVLPSISKLRVSSRPS-SSSLSRTSRIFDST-LKLTRNKWKISCFRHEEISPENSKP 68
           HRP +  S SK RV  R   S +L++ S +  S+  K  ++KWKI CFR+E+ +PEN   
Sbjct: 14  HRPALSSSRSKFRVPCRTVFSPALTKISPLTASSPSKSAKHKWKILCFRNEDSAPENP-- 71

Query: 69  ESIEHFVQDELVKPEIDQSNPIKRDWATTLREAADGVLRAIGSRWTVPWTAETILQVMLL 128
              EHFV +ELVKP+ D     K DW  T ++AAD VL+AIG+RW VPWT ETI+QVMLL
Sbjct: 72  ---EHFVPEELVKPDQDSPCTDKTDWKATFQKAADAVLKAIGTRWKVPWTVETIVQVMLL 128

Query: 129 WVAAFWFIGSWVIPFAAHV--------------------------AGIAILHRCLSRFHP 162
           WVAAFWFIGSW+IPF AH+                          AGIAILHRCLS F P
Sbjct: 129 WVAAFWFIGSWMIPFMAHISGFHKESLTFRGQALFSLITDVTEGLAGIAILHRCLSMFRP 188

Query: 163 LPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQ-FNLNLLPLMPSAPVTISSVEQSIMAR 221
           L SDWFRF+LKGNWQLDV +GC MFP VNRLSQ     L     S+PV++SSVEQSIMAR
Sbjct: 189 LASDWFRFTLKGNWQLDVIIGCFMFPFVNRLSQLNLNLLPLPPTSSPVSLSSVEQSIMAR 248

Query: 222 DPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
           DPVAMALYA+VVS+CAPVWEEIVFRGFLLPSLT+YMPVWCA
Sbjct: 249 DPVAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMPVWCA 289

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456345|ref|XP_004145910.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101217840 [Cucumis sativus]

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 163/303 (53%), Positives = 199/303 (65%), Gaps = 47/303 (15%)

Query: 5   CSHSLSHRPIVLPSISKLRVSSRPSSSSLSRTSRIFDST--LKLTRNKWKISCFRHEEIS 62
           C HSLS RP    S   +RV  +P        S I  +T   +  RNKW+I CFR EE S
Sbjct: 8   CCHSLSFRPAPPNSSFSIRVHLKPLLPRFPLNSSIHCATNLSRRRRNKWEILCFRREETS 67

Query: 63  PENSKPESIEHFVQDELVK-PEIDQSNPIKRDW----------------ATTLREAADGV 105
           PEN + +S+E  + ++LV  PEI+Q +  +++W                 T + EA + +
Sbjct: 68  PENFESKSVEDKLAEDLVTTPEINQPSDPRKEWEPRESRCSXLLLCCSVGTEVGEAVESI 127

Query: 106 LRAIGSRWTVPWTAETILQVMLLWVAAFWFIGSWVIPFAAHVAG---------------- 149
              +   W VPWTA+TI+QVMLLWVA+FW IGSW+IP  AH AG                
Sbjct: 128 F--VTKPWVVPWTAKTIVQVMLLWVASFWVIGSWIIPIIAHTAGYRKEFMTHRGQALYSL 185

Query: 150 ----------IAILHRCLSRFHPLPSDWFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLN 199
                     +AILHRCLSRFHPLPS WF+FS++G WQ DV LGCLMFPLVNRLSQ NLN
Sbjct: 186 LTDVAEGLTGMAILHRCLSRFHPLPSSWFKFSIEGKWQFDVGLGCLMFPLVNRLSQVNLN 245

Query: 200 LLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPV 259
           LLP++PS P+T+SSVEQSI+ARDPVAMALYA+VVSVCAP+WEEIVFRGFLLPSLTKYMPV
Sbjct: 246 LLPVLPSTPITVSSVEQSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTKYMPV 305

Query: 260 WCA 262
           WC+
Sbjct: 306 WCS 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
TAIR|locus:2175836	347	AT5G60750 "AT5G60750" [Arabido	0.571	0.435	0.687	1.2e-51

TAIR|locus:2175836 AT5G60750 "AT5G60750" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 108/157 (68%), Positives = 122/157 (77%)

Query:   109 IGSRWTVPWTAET--ILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSD 166
             IGS W +P+ A      +  L +     F  S +      +AGIAILHRCLS F PL SD
Sbjct:   136 IGS-WMIPFMAHISGFHKESLTFRGQALF--SLITDVTEGLAGIAILHRCLSMFRPLASD 192

Query:   167 WFRFSLKGNWQLDVALGCLMFPLVNRLSQFNLNLLPLMP-SAPVTISSVEQSIMARDPVA 225
             WFRF+LKGNWQLDV +GC MFP VNRLSQ NLNLLPL P S+PV++SSVEQSIMARDPVA
Sbjct:   193 WFRFTLKGNWQLDVIIGCFMFPFVNRLSQLNLNLLPLPPTSSPVSLSSVEQSIMARDPVA 252

Query:   226 MALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCA 262
             MALYA+VVS+CAPVWEEIVFRGFLLPSLT+YMPVWCA
Sbjct:   253 MALYAVVVSICAPVWEEIVFRGFLLPSLTRYMPVWCA 289

GO:0004175 "endopeptidase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006508 "proteolysis" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.III.514.1 hypothetical protein (303 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	264
pfam02517	93	pfam02517, Abi, CAAX protease self-immunity	2e-05
COG1266	226	COG1266, COG1266, Predicted metal-dependent membra	0.001

>gnl|CDD|217080 pfam02517, Abi, CAAX protease self-immunity

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 223 PVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAYW 264
           P+ + L  +++++ AP+ EE++FRGFLLP L K      A  
Sbjct: 1   PLLLLLLLLLLALLAPIGEELLFRGFLLPRLRKRFWPLLAIL 42

Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity. Length = 93

>gnl|CDD|224185 COG1266, COG1266, Predicted metal-dependent membrane protease [General function prediction only]

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 5/143 (3%)

Query: 122 ILQVMLLWVAAFWFIGSWVIPFAAHVAGIAILHRCLSRFHPLPSDWFRFSLKGNWQLDVA 181
           +  ++L  +     +       A  +  + +    ++    L        L     L   
Sbjct: 23  LWLLLLFLLLLLPLLLLLGGLLALLLVLLLLALFLIALAFLLGF-LKLLGLLRKGGLAWI 81

Query: 182 LGCLMFPLVNRLSQFNLNLLPLMPSAPVTISSVEQSIMARDPVAMALYAIVVSVCAPVWE 241
           L      L   L     +L   + S  + ++ +   ++    + + L+ +V+ + AP+ E
Sbjct: 82  LL---LLLGLLLIPLLFSLFLSLLSVGLLLNQLPL-LLTLAVLWLLLFFLVLLILAPLAE 137

Query: 242 EIVFRGFLLPSLTKYMPVWCAYW 264
           E++FRG+LL +L +      A  
Sbjct: 138 ELLFRGYLLGALARRFGPLLAII 160

Length = 226

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	264
TIGR03008	222	pepcterm_CAAX CAAX prenyl protease-related protein	97.86
COG1266	226	Predicted metal-dependent membrane protease [Gener	97.79
PF02517	91	Abi: CAAX protease self-immunity; InterPro: IPR003	97.61

>TIGR03008 pepcterm_CAAX CAAX prenyl protease-related protein

Probab=97.86  E-value=0.0001  Score=66.84  Aligned_cols=31  Identities=32%  Similarity=0.523  Sum_probs=26.0

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhhhchhhhhc
Q 024680          225 AMALYAIVVSVCAPVWEEIVFRGFLLPSLTK  255 (264)
Q Consensus       225 a~~l~~l~~~vlAPI~EEiiFRGFLL~sLtr  255 (264)
                      ..+..++.+++++|+.||++|||++++.+.+
T Consensus       115 l~~~~l~~~~l~vpi~EElfFRG~l~~~l~~  145 (222)
T TIGR03008       115 LIAFRLAGATLVVPVMEELFWRSFLLRYLQQ  145 (222)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            3444557889999999999999999999975

The CAAX prenyl protease, in eukaryotes, catalyzes three covalent modifications, including cleavage and acylation, at the C-terminus of certain proteins in a process connected to protein sorting. This family describes a bacterial protein family homologous to one domain of the CAAX-processing enzyme. Members of this protein family are found in genomes that carry a predicted protein sorting system, PEP-CTERM/exosortase, usually in the vicinity of the EpsH homolog that is the hallmark of the system. The function of this protein is unknown, but it may relate to protein motification.

>COG1266 Predicted metal-dependent membrane protease [General function prediction only]

Probab=97.79  E-value=1.7e-05  Score=67.05  Aligned_cols=40  Identities=33%  Similarity=0.569  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHhhhchhhhhccCcccccc
Q 024680          224 VAMALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAY  263 (264)
Q Consensus       224 ~a~~l~~l~~~vlAPI~EEiiFRGFLL~sLtr~~p~w~AI  263 (264)
                      ......+++.++.+|+.||++|||++++.+.++.+.|.|+
T Consensus       120 ~~~~~~~~~~~i~~~l~EEl~fRg~l~~~l~~~~~~~~a~  159 (226)
T COG1266         120 LWLLLFFLVLLILAPLAEELLFRGYLLGALARRFGPLLAI  159 (226)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhcCcHHHH
Confidence            3567778889999999999999999999999999987764

>PF02517 Abi: CAAX protease self-immunity; InterPro: IPR003675 Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide is removed by one of the CAAX prenyl proteases)

Probab=97.61  E-value=4.2e-05  Score=57.61  Aligned_cols=35  Identities=34%  Similarity=0.742  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHhhHHHHHHHhhhchhhhhccCcccc
Q 024680          227 ALYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWC  261 (264)
Q Consensus       227 ~l~~l~~~vlAPI~EEiiFRGFLL~sLtr~~p~w~  261 (264)
                      +..++..++++|+.||++|||++++.+.+..+.+.
T Consensus         4 ~~~~~~~~~~~~~~EEl~fRg~l~~~l~~~~~~~~   38 (91)
T PF02517_consen    4 LIFFLVMILIAPIAEELFFRGFLFNRLRRRFNPWF   38 (91)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence            55667889999999999999999999999864343

The family contains the Q03530 from SWISSPROT CAAX prenyl protease []. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding []. While these proteins are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity []. This family also includes lysostaphin resistance protein A [].; GO: 0016020 membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00