Citrus Sinensis ID: 024720


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
MGEQQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTFTFQFGLGVGVSKDHNQDEELGRSAVDLGSVWEYYEETAFVPRRS
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHcccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccHHHcccEEEEcccccccccccHccHHHHHcccccccEEcccc
MGEQQLLDYILVPFGLLIMAAYHVWLLYRIVkhptktvigvnaINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTssdgdrstwftfgdrsdffysIKFFFILVCFLVAFLLNVQSIryyshagilinvpfkkmsenvhhhqLTAEFVARTVNRGSYFWSLGLRAFYFSFPlflwifgpipmFLCCVVLVFLLYFLDVtftfqfglgvgvskdhnqdeelgrsavDLGSVWEYYEEtafvprrs
MGEQQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTFTFQFGLGVGVskdhnqdeelgrsavdlgsvWEYYeetafvprrs
MGEQQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMflccvvlvfllyfldvtftfQFGLGVGVSKDHNQDEELGRSAVDLGSVWEYYEETAFVPRRS
*****LLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTFTFQFGLGVGVSK********GRSAVDLGSVWEYYEETAF*****
**EQQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFK**********LTAEFVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTFTF******************************************
MGEQQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTFTFQFGLGVGVSKDHNQDEELGRSAVDLGSVWEYYEETAFVPRRS
*GEQQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTFTFQFGLGVGVSKDHN****LGRSAVDLGSVWEYYEETAFVP***
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
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MGEQQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTFTFQFGLGVGVSKDHNQDEELGRSAVDLGSVWEYYEETAFVPRRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query263
224132546219 predicted protein [Populus trichocarpa] 0.817 0.981 0.805 1e-95
224134933220 predicted protein [Populus trichocarpa] 0.821 0.981 0.788 7e-94
356498908251 PREDICTED: uncharacterized protein LOC10 0.920 0.964 0.711 5e-93
255557184246 conserved hypothetical protein [Ricinus 0.916 0.979 0.734 1e-91
357490387254 hypothetical protein MTR_5g068640 [Medic 0.901 0.933 0.684 1e-91
297742711262 unnamed protein product [Vitis vinifera] 0.954 0.958 0.658 2e-90
225463805239 PREDICTED: uncharacterized protein LOC10 0.901 0.991 0.689 2e-90
356551825233 PREDICTED: uncharacterized protein LOC10 0.813 0.918 0.758 1e-89
297742712248 unnamed protein product [Vitis vinifera] 0.908 0.963 0.679 1e-88
225463803244 PREDICTED: uncharacterized protein LOC10 0.897 0.967 0.683 1e-88
>gi|224132546|ref|XP_002321345.1| predicted protein [Populus trichocarpa] gi|224151094|ref|XP_002337058.1| predicted protein [Populus trichocarpa] gi|222837933|gb|EEE76298.1| predicted protein [Populus trichocarpa] gi|222868341|gb|EEF05472.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  355 bits (910), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 174/216 (80%), Positives = 189/216 (87%), Gaps = 1/216 (0%)

Query: 4   QQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVL 63
           + +LDY LVP GL+ M AYH+WLLYRI+KHPTKTVIG+NAINRRFWV+AMMED SKNGVL
Sbjct: 3   RAILDYTLVPLGLVTMVAYHIWLLYRIMKHPTKTVIGINAINRRFWVRAMMEDVSKNGVL 62

Query: 64  AVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTW-FTFGDRSDFFYSIKFFFIL 122
           AVQTLRNNIMAST+LASTAIMLSSLIA+LMTS  GD+S   F FGDRS+   SIKFF IL
Sbjct: 63  AVQTLRNNIMASTVLASTAIMLSSLIAVLMTSGSGDKSARNFVFGDRSELGLSIKFFSIL 122

Query: 123 VCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGL 182
           VCFLVAFLLNVQSIRYYSHA ILINVPFKKM  N  H  L+ E+VAR+VNRGSYFWSLGL
Sbjct: 123 VCFLVAFLLNVQSIRYYSHASILINVPFKKMCPNHRHQHLSTEYVARSVNRGSYFWSLGL 182

Query: 183 RAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVT 218
           RAFYFSFPLFLWIFGPIPMFL CV LV +LYFLDVT
Sbjct: 183 RAFYFSFPLFLWIFGPIPMFLSCVFLVSMLYFLDVT 218




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134933|ref|XP_002321941.1| predicted protein [Populus trichocarpa] gi|222868937|gb|EEF06068.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356498908|ref|XP_003518289.1| PREDICTED: uncharacterized protein LOC100790696 [Glycine max] Back     alignment and taxonomy information
>gi|255557184|ref|XP_002519623.1| conserved hypothetical protein [Ricinus communis] gi|223541213|gb|EEF42768.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|357490387|ref|XP_003615481.1| hypothetical protein MTR_5g068640 [Medicago truncatula] gi|355516816|gb|AES98439.1| hypothetical protein MTR_5g068640 [Medicago truncatula] Back     alignment and taxonomy information
>gi|297742711|emb|CBI35345.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225463805|ref|XP_002268419.1| PREDICTED: uncharacterized protein LOC100242299 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356551825|ref|XP_003544274.1| PREDICTED: uncharacterized protein LOC100806179 [Glycine max] Back     alignment and taxonomy information
>gi|297742712|emb|CBI35346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225463803|ref|XP_002270575.1| PREDICTED: uncharacterized protein LOC100250773 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query263
TAIR|locus:2153909248 AT5G24600 [Arabidopsis thalian 0.756 0.802 0.721 1.7e-75
TAIR|locus:505006357244 AT3G18215 "AT3G18215" [Arabido 0.741 0.799 0.561 2.3e-55
TAIR|locus:2128151239 AT4G31330 "AT4G31330" [Arabido 0.730 0.803 0.428 2.7e-36
TAIR|locus:2161348248 AT5G46060 "AT5G46060" [Arabido 0.718 0.762 0.418 4.6e-34
TAIR|locus:2184590246 AT5G24790 "AT5G24790" [Arabido 0.726 0.776 0.382 3.2e-33
TAIR|locus:2142549246 AT5G10580 "AT5G10580" [Arabido 0.749 0.800 0.383 5.2e-33
DICTYBASE|DDB_G0275599255 DDB_G0275599 "DUF599 family pr 0.718 0.741 0.361 5.9e-25
TAIR|locus:2156476239 AT5G43180 "AT5G43180" [Arabido 0.726 0.799 0.312 3.1e-19
TAIR|locus:2153909 AT5G24600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 148/205 (72%), Positives = 170/205 (82%)

Query:     3 EQQLLDYILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGV 62
             +++ LDY LVP GL +M  YH+WLLYRI+  P+ TV+G+NA NRR WVQAMMED+SKNGV
Sbjct:     2 KREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNGV 61

Query:    63 LAVQTLRNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWFTFGDRSDFFYSIKFFFIL 122
             LAVQTLRNNIMASTLLASTAIML SLIA+LMTS+ G+RS WF FGD+SD  +S+KFF IL
Sbjct:    62 LAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSATGERSVWFVFGDKSDRAFSLKFFAIL 121

Query:   123 VCFLVAFLLNVQSIRYYSHAGILINVPFKKM---SENVHHH---QLTAEFVARTVNRGSY 176
             VCFLVAFLLNVQSIRYYSHA ILINVPFK++   S     +    +  ++VA TVNRGSY
Sbjct:   122 VCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVNRGSY 181

Query:   177 FWSLGLRAFYFSFPLFLWIFGPIPM 201
             FWSLGLRAFYFS PLFLWIFGPIPM
Sbjct:   182 FWSLGLRAFYFSSPLFLWIFGPIPM 206




GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:505006357 AT3G18215 "AT3G18215" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128151 AT4G31330 "AT4G31330" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161348 AT5G46060 "AT5G46060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184590 AT5G24790 "AT5G24790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142549 AT5G10580 "AT5G10580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0275599 DDB_G0275599 "DUF599 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2156476 AT5G43180 "AT5G43180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query263
pfam04654216 pfam04654, DUF599, Protein of unknown function, DU 2e-68
COG3821234 COG3821, COG3821, Predicted membrane protein [Func 9e-05
>gnl|CDD|147016 pfam04654, DUF599, Protein of unknown function, DUF599 Back     alignment and domain information
 Score =  210 bits (537), Expect = 2e-68
 Identities = 81/216 (37%), Positives = 115/216 (53%), Gaps = 11/216 (5%)

Query: 9   YILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTL 68
            + VP  LL+   YH +L +R  + PT  + G+ A  RR W++ M+    +  VL VQ L
Sbjct: 1   LLAVPLFLLVWVGYHWFLEHRAKRRPT--LSGIMARYRRAWMRRMLTR--EVRVLDVQIL 56

Query: 69  RNNIMASTLLASTAIMLSSLIAILMTSSDGDRSTWF----TFGDR-SDFFYSIKFFFILV 123
           RN IM +T  ASTAI+L + IA L+ S+D  R         FG   S   + +K   +LV
Sbjct: 57  RNLIMGTTFFASTAILLIAGIAALLGSTD--RLIGVLGDLPFGAHTSRAAFELKLLLLLV 114

Query: 124 CFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAEFVARTVNRGSYFWSLGLR 183
            FL AF     SIR +++  ILI              +  AE+ AR +NR +  +++GLR
Sbjct: 115 IFLYAFFKFTWSIRQFNYCSILIGAAPMDPEGADEDAEAYAEYAARVLNRAANSFNVGLR 174

Query: 184 AFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTF 219
           A+YF+  L LW FGPIP FL  +V+V +LY  D   
Sbjct: 175 AYYFALALLLWFFGPIPFFLATLVVVAVLYRRDFRS 210


This family includes several uncharacterized proteins. Length = 216

>gnl|CDD|226342 COG3821, COG3821, Predicted membrane protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 263
PF04654216 DUF599: Protein of unknown function, DUF599; Inter 100.0
COG3821234 Predicted membrane protein [Function unknown] 100.0
>PF04654 DUF599: Protein of unknown function, DUF599; InterPro: IPR006747 This family includes several uncharacterised proteins Back     alignment and domain information
Probab=100.00  E-value=8.6e-68  Score=469.86  Aligned_cols=210  Identities=39%  Similarity=0.651  Sum_probs=197.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhCCCCCHhhHHHhhHHHHHHHHHhhccccchhHHHHhhhhhHHHHHHHHHHHHHHHH
Q 024720            9 YILVPFGLLIMAAYHVWLLYRIVKHPTKTVIGVNAINRRFWVQAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLSSL   88 (263)
Q Consensus         9 ~iav~~~l~~~~gYh~~l~~~~~~~p~~t~~g~~~~~R~~Wm~~m~~r~~r~~il~vqtLrn~i~sstFfASTsilli~G   88 (263)
                      ++++|+|++||+|||+|++++.+++|  |++|+|+++|++||++|++||+  +|+|+|+|||++|++||||||||++++|
T Consensus         1 ~~av~~~l~~~~gY~~~l~~~~~~~p--t~~~~~~~~R~~W~~~m~~r~~--~ildvq~Lrn~~~~~tffASTailli~g   76 (216)
T PF04654_consen    1 LIAVPLFLLCWVGYHLYLERRVRRRP--TLSGIMNQYRRAWMRQMMDRKN--RILDVQTLRNLIMSATFFASTAILLIGG   76 (216)
T ss_pred             CcHHHHHHHHHHHHHHHHhhhccCCC--hHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47999999999999999999999999  8999999999999999998864  5999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcc--cccccCC-CcchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCCCCCcccccchhhHHH
Q 024720           89 IAILMTSSDGDRST--WFTFGDR-SDFFYSIKFFFILVCFLVAFLLNVQSIRYYSHAGILINVPFKKMSENVHHHQLTAE  165 (263)
Q Consensus        89 l~all~s~~~~~~~--~~~~g~~-~~~~~~lKll~Ll~if~~AFf~F~wS~R~~n~~~~Lig~p~~~~~~~~~~~~~~~~  165 (263)
                      ++++++++|+....  +++++.+ ++..+|+|++++++||++|||||+||+||||||+||||+||++++.++++++..++
T Consensus        77 ~~all~~~~~~~~~~~~~~~~~~~s~~~~~lK~l~ll~~f~~aFf~f~~s~R~~n~~~~li~~~p~~~~~~~~~~~~~~~  156 (216)
T PF04654_consen   77 LLALLGSTDKLSSVASDLPFGGSASRFLFELKLLLLLVIFLYAFFKFTWSIRQYNHASFLIGAPPEPPEGDEAEREAFAE  156 (216)
T ss_pred             HHHHHcCcHHHhhHHhhCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhhHHHH
Confidence            99999999998754  8899888 66899999999999999999999999999999999999988654433566789999


Q ss_pred             HHHHHHHhhHhhhhhhHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHhHhccccc
Q 024720          166 FVARTVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFLCCVVLVFLLYFLDVTFTFQ  222 (263)
Q Consensus       166 ~va~~l~ra~~~~n~GlRayYfalall~W~~gP~~l~~~tv~vV~vLy~rdf~S~~~  222 (263)
                      ++++++++|+++||.|+|+|||++|+++|++||++++++|+++|.+||+|||.|+.+
T Consensus       157 ~~a~~~~~a~~~fn~GlRa~yfal~~l~W~~gP~~~~~~t~~vv~~L~~rdf~S~~~  213 (216)
T PF04654_consen  157 YAARVLNRAGNFFNRGLRAYYFALPLLLWFFGPWALIAATVLVVAVLYRRDFRSRAR  213 (216)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcchHh
Confidence            999999999999999999999999999999999999999999999999999999987



>COG3821 Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00