Citrus Sinensis ID: 025067

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
MTHPCIQATAAAAAKSNQNGGAQRKQNAPKNDDVEVEEDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRLGGWEQEN
cccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHccccccccccccccccccccccEEEccccccccHHHHcccccEEEEccccccHHHHHHHHHHHHHHcccccccEEEEEHHHHHHHHHHHccccccccccccccccccEEEEEEccccccccccccccc
cccHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHccccccccccHHHHHHHHHHHHHHccccccEEEEEEcHHHHHHHHHccccccEEEEEEccHHcEccccEEEEEccccHcccHHHHccccEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHcccccccEcccccccccccEEEEEEcccccccccccccc
MTHPCIQATAAAAAKsnqnggaqrkqnapknddveveedddrpmLSSQALAALQEFLSEQnqtsetaqnktesdsdevALVSEDWRLSQFWYDAVTAETVAQEAVSLcsdsdsrvaciaCPTLYAYLKKirpevspkiLEYDMRFeqygsdfafydynqpqdlplelKHAFsvvvvdppylskeCLEKVSETVSflarpgdskllLLTGEVQKERAAELlglrpcgfrpqhssklgnefrlftnygpgtrlggweqen
MTHPCIQATAAAaaksnqnggaqrkqnapkndDVEVEEDDDRPMLSSQALAALQEFLSEQNQTsetaqnktesdsdEVALVSEDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVsflarpgdskLLLLTGEVQKERAAELLGLRPCGFrpqhssklgnefrlftnygpgtrlggweqen
MTHPCIQataaaaaKSNQNGGAQRKQNAPKNddveveedddRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDavtaetvaqeavSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRLGGWEQEN
******************************************************************************ALVSEDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQ***KLGNEFRLFTNYGPGT*********
***PC**************************************MLSSQALAALQEFL**********************LVSEDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRLGGWE***
*******************************************MLSSQALAALQEFLS********************ALVSEDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRLGGWEQEN
****CIQATAAAAA****************************PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRL*******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTHPCIQATAAAAAKSNQNGGAQRKQNAPKNDDVEVEEDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRLGGWEQEN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query258 2.2.26 [Sep-21-2011]
Q8WVE0214 N(6)-adenine-specific DNA yes no 0.802 0.967 0.479 8e-53
Q9CY45214 N(6)-adenine-specific DNA yes no 0.786 0.948 0.488 2e-51
Q17QF2226 N(6)-adenine-specific DNA yes no 0.790 0.902 0.464 1e-48
Q6GN98220 N(6)-adenine-specific DNA N/A no 0.790 0.927 0.464 2e-48
Q5ZKT6213 N(6)-adenine-specific DNA yes no 0.779 0.943 0.461 5e-46
Q5WRN3218 N(6)-adenine-specific DNA yes no 0.786 0.931 0.342 1e-33
Q6NYP8166 N(6)-adenine-specific DNA yes no 0.600 0.933 0.439 1e-32
Q9VMH7223 N(6)-adenine-specific DNA yes no 0.794 0.919 0.351 2e-30
Q86A24211 N(6)-adenine-specific DNA yes no 0.782 0.957 0.366 3e-29
P53200248 N(6)-adenine-specific DNA yes no 0.771 0.802 0.355 3e-26
>sp|Q8WVE0|N6MT2_HUMAN N(6)-adenine-specific DNA methyltransferase 2 OS=Homo sapiens GN=N6AMT2 PE=2 SV=1 Back     alignment and function desciption
 Score =  207 bits (526), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 104/217 (47%), Positives = 140/217 (64%), Gaps = 10/217 (4%)

Query: 38  EDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTA 97
           EDD+ P LS+ ALAALQEF +EQ Q  E      E D   + ++ E+W+LSQFWY   TA
Sbjct: 5   EDDETPQLSAHALAALQEFYAEQKQQIEPG----EDDKYNIGIIEENWQLSQFWYSQETA 60

Query: 98  ETVAQEAVSLCSDSDSRVACIACPTLYAYLKKI-RPEVSPKILEYDMRFEQYGSDFAFYD 156
             +AQEA++   +   R+AC++ P++Y  L+++ R   S  I EYD RF  YG +F FYD
Sbjct: 61  LQLAQEAIAAVGEG-GRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYD 119

Query: 157 YNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKER 215
           YN P DLP  +  H+F +V+ DPPYLS+ECL K SETV +L R    K+LL TG + +E+
Sbjct: 120 YNNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTR---GKILLCTGAIMEEQ 176

Query: 216 AAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRLG 252
           AAELLG++ C F P+H+  L NEFR + NY  G   G
Sbjct: 177 AAELLGVKMCTFVPRHTRNLANEFRCYVNYDSGLDCG 213
Putative DNA methyltransferase.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9CY45|N6MT2_MOUSE N(6)-adenine-specific DNA methyltransferase 2 OS=Mus musculus GN=N6amt2 PE=2 SV=1 Back     alignment and function description
>sp|Q17QF2|N6MT2_BOVIN N(6)-adenine-specific DNA methyltransferase 2 OS=Bos taurus GN=N6AMT2 PE=2 SV=1 Back     alignment and function description
>sp|Q6GN98|N6MT2_XENLA N(6)-adenine-specific DNA methyltransferase 2 OS=Xenopus laevis GN=n6amt2 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZKT6|N6MT2_CHICK N(6)-adenine-specific DNA methyltransferase 2 OS=Gallus gallus GN=N6AMT2 PE=2 SV=1 Back     alignment and function description
>sp|Q5WRN3|N6MT2_CAEEL N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Caenorhabditis elegans GN=M142.8 PE=3 SV=1 Back     alignment and function description
>sp|Q6NYP8|N6MT2_DANRE N(6)-adenine-specific DNA methyltransferase 2 OS=Danio rerio GN=n6amt2 PE=2 SV=1 Back     alignment and function description
>sp|Q9VMH7|N6MT2_DROME N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Drosophila melanogaster GN=CG9154 PE=2 SV=2 Back     alignment and function description
>sp|Q86A24|N6MT2_DICDI N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Dictyostelium discoideum GN=DDB_G0272708 PE=3 SV=1 Back     alignment and function description
>sp|P53200|AML1_YEAST N(6)-adenine-specific DNA methyltransferase-like 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AML1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query258
359481089224 PREDICTED: N(6)-adenine-specific DNA met 0.825 0.950 0.730 3e-91
296089294203 unnamed protein product [Vitis vinifera] 0.775 0.985 0.738 2e-86
449526848242 PREDICTED: N(6)-adenine-specific DNA met 0.829 0.884 0.708 3e-86
449451189242 PREDICTED: N(6)-adenine-specific DNA met 0.829 0.884 0.708 4e-86
255581584239 conserved hypothetical protein [Ricinus 0.810 0.874 0.712 4e-86
224139948221 predicted protein [Populus trichocarpa] 0.841 0.981 0.693 2e-85
356500399235 PREDICTED: N(6)-adenine-specific DNA met 0.821 0.902 0.684 2e-83
297820680248 hypothetical protein ARALYDRAFT_907327 [ 0.887 0.923 0.649 1e-82
18410963248 nucleic acid binding / methyltransferase 0.887 0.923 0.632 6e-81
356530663236 PREDICTED: N(6)-adenine-specific DNA met 0.790 0.864 0.680 6e-78
>gi|359481089|ref|XP_002265324.2| PREDICTED: N(6)-adenine-specific DNA methyltransferase 2-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 163/223 (73%), Positives = 189/223 (84%), Gaps = 10/223 (4%)

Query: 37  EEDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVT 96
           + DDD P LSS+A+AAL++FLSEQ QT          D+D V+LVSEDWRLSQFWYD  T
Sbjct: 9   DSDDDTPRLSSEAMAALRQFLSEQTQT--------HVDADSVSLVSEDWRLSQFWYDPQT 60

Query: 97  AETVAQEAVSLCSDSDS--RVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAF 154
           AETV++E ++LC  SDS  RVAC+ACPTLYAYLKKI P VS ++LEYD RFEQYGSDF F
Sbjct: 61  AETVSKEVLTLCDSSDSLVRVACVACPTLYAYLKKIDPNVSLQLLEYDKRFEQYGSDFTF 120

Query: 155 YDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKE 214
           YDYNQP++LP ELKHAF VVV DPPYLSKECLEKV++T+SFLARPG+S LLLLTGEVQ+E
Sbjct: 121 YDYNQPEELPPELKHAFQVVVADPPYLSKECLEKVAQTISFLARPGESFLLLLTGEVQRE 180

Query: 215 RAAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRLGGWEQE 257
           RAAELLG+ PC FRPQHS+KLGNEFRLFTNY PGTRLGGW+++
Sbjct: 181 RAAELLGMHPCCFRPQHSNKLGNEFRLFTNYDPGTRLGGWDKQ 223

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296089294|emb|CBI39066.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449526848|ref|XP_004170425.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449451189|ref|XP_004143344.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255581584|ref|XP_002531597.1| conserved hypothetical protein [Ricinus communis] gi|223528793|gb|EEF30800.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224139948|ref|XP_002323354.1| predicted protein [Populus trichocarpa] gi|222867984|gb|EEF05115.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356500399|ref|XP_003519019.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|297820680|ref|XP_002878223.1| hypothetical protein ARALYDRAFT_907327 [Arabidopsis lyrata subsp. lyrata] gi|297324061|gb|EFH54482.1| hypothetical protein ARALYDRAFT_907327 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18410963|ref|NP_567065.1| nucleic acid binding / methyltransferase [Arabidopsis thaliana] gi|16648683|gb|AAL25534.1| AT3g58470/F14P22_60 [Arabidopsis thaliana] gi|22137250|gb|AAM91470.1| AT3g58470/F14P22_60 [Arabidopsis thaliana] gi|332646265|gb|AEE79786.1| nucleic acid binding / methyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356530663|ref|XP_003533900.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 2-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query258
TAIR|locus:2076411248 AT3G58470 [Arabidopsis thalian 0.833 0.866 0.609 1.8e-69
RGD|1306762224 N6amt2 "N-6 adenine-specific D 0.767 0.883 0.466 7.9e-46
UNIPROTKB|Q8WVE0214 N6AMT2 "N(6)-adenine-specific 0.782 0.943 0.448 1.6e-45
MGI|MGI:1915293214 N6amt2 "N-6 adenine-specific D 0.767 0.925 0.456 7.1e-45
UNIPROTKB|E2R958214 N6AMT2 "Uncharacterized protei 0.767 0.925 0.442 5e-44
UNIPROTKB|Q17QF2226 N6AMT2 "N(6)-adenine-specific 0.771 0.880 0.447 2.2e-43
UNIPROTKB|Q5ZKT6213 N6AMT2 "N(6)-adenine-specific 0.779 0.943 0.437 8.4e-42
ZFIN|ZDB-GENE-040426-2551166 n6amt2 "N-6 adenine-specific D 0.600 0.933 0.420 5.4e-31
WB|WBGene00043057218 M142.8 [Caenorhabditis elegans 0.759 0.899 0.330 3.8e-30
FB|FBgn0031777223 CG9154 [Drosophila melanogaste 0.771 0.892 0.361 1e-29
TAIR|locus:2076411 AT3G58470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 134/220 (60%), Positives = 167/220 (75%)

Query:    44 MLSSQALAALQEFLSEQNQTSETAQNKTE----SDSDEVALVSEDWRLSQFWYDXXXXXX 99
             +LSSQALAAL+EFL++QN+T  +    +      +SD+V LV+EDWRLSQFWY+      
Sbjct:    29 VLSSQALAALREFLADQNKTVASTPPASSVAGGEESDKVELVTEDWRLSQFWYEPETAET 88

Query:   100 XXXXXXSLCSDSDS-RVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYN 158
                   +L       RVACIACPTLY YLKK  P +  ++LEYDMRFE+YG +F FYDYN
Sbjct:    89 VADEVVTLSQRIPGCRVACIACPTLYVYLKKRDPSLQVQLLEYDMRFERYGKEFTFYDYN 148

Query:   159 QPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAE 218
             +P+DLPL+LKH F ++V DPPYLS+ECLE+VS+T+ FLA P DS LLLLTGEVQ+E AAE
Sbjct:   149 EPEDLPLQLKHCFHIIVADPPYLSRECLERVSQTILFLASPVDSLLLLLTGEVQREHAAE 208

Query:   219 LLGLRPCGFRPQHSSKLGNEFRLFTNYGPGTRLGGWEQEN 258
             LLG+RPC F+P HSSKLGNEFRLF +Y PGTRLGG E+++
Sbjct:   209 LLGVRPCVFKPHHSSKLGNEFRLFISYDPGTRLGGLEEDS 248
GO:0003676 "nucleic acid binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0008168 "methyltransferase activity" evidence=IEA
GO:0032259 "methylation" evidence=IEA
RGD|1306762 N6amt2 "N-6 adenine-specific DNA methyltransferase 2 (putative)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8WVE0 N6AMT2 "N(6)-adenine-specific DNA methyltransferase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1915293 N6amt2 "N-6 adenine-specific DNA methyltransferase 2 (putative)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2R958 N6AMT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q17QF2 N6AMT2 "N(6)-adenine-specific DNA methyltransferase 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZKT6 N6AMT2 "N(6)-adenine-specific DNA methyltransferase 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2551 n6amt2 "N-6 adenine-specific DNA methyltransferase 2 (putative)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00043057 M142.8 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0031777 CG9154 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8WVE0N6MT2_HUMAN2, ., 1, ., 1, ., -0.47920.80230.9672yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XVI.2010.1
hypothetical protein (221 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query258
pfam10237161 pfam10237, N6-adenineMlase, Probable N6-adenine me 6e-71
>gnl|CDD|220643 pfam10237, N6-adenineMlase, Probable N6-adenine methyltransferase Back     alignment and domain information 
 Score =  214 bits (547), Expect = 6e-71
 Identities = 76/161 (47%), Positives = 106/161 (65%), Gaps = 3/161 (1%)

Query: 86  RLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIR-PEVSPKILEYDMR 144
           +LSQFWY   TAE +A+  +    D  + +AC++ P++YA LK+   P  +  +LEYD R
Sbjct: 1   QLSQFWYSDETAEKLAKALLEGA-DEGTVIACVSAPSVYAALKERPIPTKNVYLLEYDKR 59

Query: 145 FEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKL 204
           F  YG +F FYDYN+P +LP +LK  F  V+ DPP+LS+ECL K + T+  L +P DSKL
Sbjct: 60  FAVYGGEFVFYDYNKPLELPEQLKGKFDRVIADPPFLSEECLTKTAITIKLLLKP-DSKL 118

Query: 205 LLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNY 245
           LL TGE  ++ AA+LLGL+   F P+H   L NEFR + N+
Sbjct: 119 LLCTGERMEDLAAKLLGLKITDFLPEHERNLSNEFRCYANF 159

This is a protein of approximately 200 residues which is conserved from plants to humans. It contains a highly conserved QFW motif close to the N-terminus and a DPPF motif in the centre. The DPPF motif is characteristic of N-6 adenine-specific DNA methylases, and this family is found in eukaryotes. Length = 161

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 258
KOG3350217 consensus Uncharacterized conserved protein [Funct 100.0
PF10237162 N6-adenineMlase: Probable N6-adenine methyltransfe 100.0
PF01861243 DUF43: Protein of unknown function DUF43; InterPro 98.25
KOG4399325 consensus C2HC-type Zn-finger protein [General fun 97.77
PRK09328275 N5-glutamine S-adenosyl-L-methionine-dependent met 97.54
TIGR03534251 RF_mod_PrmC protein-(glutamine-N5) methyltransfera 97.32
TIGR03704251 PrmC_rel_meth putative protein-(glutamine-N5) meth 97.13
PRK14967223 putative methyltransferase; Provisional 96.89
PRK14966423 unknown domain/N5-glutamine S-adenosyl-L-methionin 96.58
TIGR00536284 hemK_fam HemK family putative methylases. The gene 96.48
TIGR00537179 hemK_rel_arch HemK-related putative methylase. The 96.26
COG1568354 Predicted methyltransferases [General function pre 95.68
PRK10901427 16S rRNA methyltransferase B; Provisional 95.66
PRK15128396 23S rRNA m(5)C1962 methyltransferase; Provisional 95.56
TIGR01177329 conserved hypothetical protein TIGR01177. This fam 94.97
PRK11805307 N5-glutamine S-adenosyl-L-methionine-dependent met 94.96
PF05175170 MTS: Methyltransferase small domain; InterPro: IPR 94.86
PRK01544 506 bifunctional N5-glutamine S-adenosyl-L-methionine- 94.62
TIGR03533284 L3_gln_methyl protein-(glutamine-N5) methyltransfe 94.53
PRK09489342 rsmC 16S ribosomal RNA m2G1207 methyltransferase; 93.87
PRK14968188 putative methyltransferase; Provisional 93.22
PRK11783702 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi 92.74
PRK11524 284 putative methyltransferase; Provisional 92.08
PRK14903431 16S rRNA methyltransferase B; Provisional 91.34
PRK14901434 16S rRNA methyltransferase B; Provisional 91.25
KOG2671421 consensus Putative RNA methylase [Replication, rec 91.21
TIGR00446264 nop2p NOL1/NOP2/sun family putative RNA methylase. 91.06
PHA03412241 putative methyltransferase; Provisional 90.95
PRK14902444 16S rRNA methyltransferase B; Provisional 90.85
TIGR00563426 rsmB ribosomal RNA small subunit methyltransferase 90.55
COG0742187 N6-adenine-specific methylase [DNA replication, re 89.11
cd02440107 AdoMet_MTases S-adenosylmethionine-dependent methy 88.19
COG2890280 HemK Methylase of polypeptide chain release factor 87.93
TIGR00438188 rrmJ cell division protein FtsJ. 87.8
PF03602183 Cons_hypoth95: Conserved hypothetical protein 95; 87.52
COG1041347 Predicted DNA modification methylase [DNA replicat 86.17
PF13659117 Methyltransf_26: Methyltransferase domain; PDB: 3G 85.99
PRK14904445 16S rRNA methyltransferase B; Provisional 85.59
PRK10909199 rsmD 16S rRNA m(2)G966-methyltransferase; Provisio 85.12
PF01170179 UPF0020: Putative RNA methylase family UPF0020; In 85.08
COG2263198 Predicted RNA methylase [Translation, ribosomal st 84.75
PRK13699 227 putative methylase; Provisional 84.67
TIGR02085374 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransfer 83.57
PRK13168443 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe 82.78
PRK00312212 pcm protein-L-isoaspartate O-methyltransferase; Re 82.74
PF10672286 Methyltrans_SAM: S-adenosylmethionine-dependent me 82.73
PRK05031362 tRNA (uracil-5-)-methyltransferase; Validated 82.53
PRK00517250 prmA ribosomal protein L11 methyltransferase; Revi 81.56
PRK11783 702 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi 80.5
TIGR00138181 gidB 16S rRNA methyltransferase GidB. GidB (glucos 80.41
>KOG3350 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-78  Score=525.00  Aligned_cols=206  Identities=49%  Similarity=0.866  Sum_probs=191.0

Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHhhHhhhcccccCCcccccCcccccccccccChhHHHHHHHHHHhhcCCCCCeEE
Q 025067           37 EEDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVA  116 (258)
Q Consensus        37 ~~ddd~~~LSa~tLaAL~eF~~E~~~~~~~l~~~~~~~~~~~~~~~EDwqlSQFWYsd~Ta~~La~~l~~~a~~~~~~Ia  116 (258)
                      .+|||+|+|||+|||||+||++||+++++...++.    ..|..++||||||||||+++|++.||.+++..++ +++|||
T Consensus         4 ~e~Dd~~~LsA~aLAaL~eF~aEq~k~~e~~~~~~----~~i~~~~eDwQlsqfwy~~eta~~La~e~v~~s~-e~~rIa   78 (217)
T KOG3350|consen    4 VEDDDDLQLSADALAALNEFLAEQQKRIEEEENQS----DIIEKIGEDWQLSQFWYSDETARKLAAERVEASG-EGSRIA   78 (217)
T ss_pred             cccCcccccCHHHHHHHHHHHHHHHhhhhccCchh----hhhhhcccchhhhhhhcCHHHHHHHHHHHHhhcc-cCceEE
Confidence            34788999999999999999999999976543221    4688999999999999999999999999999998 889999


Q ss_pred             EEeChhHHHHHHhh---CCCCCceEEeecccccccCCccccccCCCCCCchhhhccCccEEEECCCCCCHHHHHHHHHHH
Q 025067          117 CIACPTLYAYLKKI---RPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETV  193 (258)
Q Consensus       117 clstPSly~~lk~~---~~~~~~~LLEyD~RF~~~g~~FvfYDyn~P~~lp~~lk~~fD~Vv~DPPFlseec~eK~A~Ti  193 (258)
                      ||||||||...+++   .|..+++|||||+||+.||.+|+|||||.|+++|..|++.||+||+|||||++||+.|+++||
T Consensus        79 cvS~Psly~y~k~re~~~~~~~v~lfEfDkRFe~yg~eFvfYDyN~p~dlp~~lk~~fdiivaDPPfL~~eCl~Kts~ti  158 (217)
T KOG3350|consen   79 CVSCPSLYVYQKKREIEIPHDQVYLFEFDKRFELYGTEFVFYDYNCPLDLPDELKAHFDIIVADPPFLSEECLAKTSETI  158 (217)
T ss_pred             EEeCchHHhhhhhhhccCCceeEEEEEehhhHHhccceeEEeccCCCCCCHHHHHhcccEEEeCCccccchhhhhhHHHH
Confidence            99999988666554   478899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEechHHHHHHHHHHhCCcccceeecCCCCCCCceeeeeccCCC
Q 025067          194 SFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYGPG  248 (258)
Q Consensus       194 r~L~k~~~~kiil~Tg~~me~~i~kll~~~~~~F~P~h~n~L~Nef~cytNye~~  248 (258)
                      |.|.++ +.|||+|||++|++++.++|++++|.|+|+|+|||+|+||||+||+++
T Consensus       159 k~L~r~-~~kvilCtGeimee~~s~~l~~~~~sF~PeH~~nLaNeF~cyaNf~~~  212 (217)
T KOG3350|consen  159 KRLQRN-QKKVILCTGEIMEEWASALLPVLKCSFRPEHERNLANEFRCYANFNLD  212 (217)
T ss_pred             HHHhcC-CceEEEechhHhHHHHHHHhhhhhccccchhhcccccceeEEEeccch
Confidence            999998 569999999999999999999999999999999999999999999985

>PF10237 N6-adenineMlase: Probable N6-adenine methyltransferase; InterPro: IPR019369 This family of proteins, which are of approximately 200 residues in length, contain a highly conserved Glu-Phe-Trp (QFW) motif close to the N terminus and an Asp/Asn-Pro-Pro-Tyr/Phe motif in the centre Back     alignment and domain information
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised Back     alignment and domain information
>KOG4399 consensus C2HC-type Zn-finger protein [General function prediction only] Back     alignment and domain information
>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific Back     alignment and domain information
>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific Back     alignment and domain information
>PRK14967 putative methyltransferase; Provisional Back     alignment and domain information
>PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional Back     alignment and domain information
>TIGR00536 hemK_fam HemK family putative methylases Back     alignment and domain information
>TIGR00537 hemK_rel_arch HemK-related putative methylase Back     alignment and domain information
>COG1568 Predicted methyltransferases [General function prediction only] Back     alignment and domain information
>PRK10901 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional Back     alignment and domain information
>TIGR01177 conserved hypothetical protein TIGR01177 Back     alignment and domain information
>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases Back     alignment and domain information
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed Back     alignment and domain information
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific Back     alignment and domain information
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional Back     alignment and domain information
>PRK14968 putative methyltransferase; Provisional Back     alignment and domain information
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional Back     alignment and domain information
>PRK11524 putative methyltransferase; Provisional Back     alignment and domain information
>PRK14903 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PRK14901 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>KOG2671 consensus Putative RNA methylase [Replication, recombination and repair] Back     alignment and domain information
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase Back     alignment and domain information
>PHA03412 putative methyltransferase; Provisional Back     alignment and domain information
>PRK14902 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB Back     alignment and domain information
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) Back     alignment and domain information
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00438 rrmJ cell division protein FtsJ Back     alignment and domain information
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH Back     alignment and domain information
>COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A Back     alignment and domain information
>PRK14904 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional Back     alignment and domain information
>PF01170 UPF0020: Putative RNA methylase family UPF0020; InterPro: IPR000241 This domain is probably a methylase Back     alignment and domain information
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13699 putative methylase; Provisional Back     alignment and domain information
>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB Back     alignment and domain information
>PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed Back     alignment and domain information
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed Back     alignment and domain information
>PF10672 Methyltrans_SAM: S-adenosylmethionine-dependent methyltransferase; InterPro: IPR019614 Members of this entry are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species Back     alignment and domain information
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated Back     alignment and domain information
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed Back     alignment and domain information
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional Back     alignment and domain information
>TIGR00138 gidB 16S rRNA methyltransferase GidB Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query258
2b3t_A276 Protein methyltransferase HEMK; translation termin 97.21
2qm3_A373 Predicted methyltransferase; putative methyltransf 96.21
4dzr_A215 Protein-(glutamine-N5) methyltransferase, release 96.06
3evz_A230 Methyltransferase; NYSGXRC, NEW YORK SGX research 95.82
3p9n_A189 Possible methyltransferase (methylase); RV2966C, a 95.74
1ej0_A180 FTSJ; methyltransferase, adoMet, adenosyl methioni 95.61
3lpm_A259 Putative methyltransferase; structural genomics, p 95.43
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 95.04
1wy7_A207 Hypothetical protein PH1948; seven-stranded beta s 94.98
3q87_B170 N6 adenine specific DNA methylase; SAM-methyltrans 94.57
1sqg_A429 SUN protein, FMU protein; rossmann-fold, mixed bet 93.97
2dpm_A284 M.dpnii 1, protein (adenine-specific methyltransfe 93.84
1g60_A 260 Adenine-specific methyltransferase MBOIIA; structu 93.62
3dmg_A381 Probable ribosomal RNA small subunit methyltransf; 92.99
2ozv_A260 Hypothetical protein ATU0636; structural genomics, 92.81
3m6w_A 464 RRNA methylase; rRNA methyltransferase, 5-methylcy 92.54
3eey_A197 Putative rRNA methylase; rRNA methylation, S-adeno 92.35
3mti_A185 RRNA methylase; SAM-dependent, PSI, MCSG, structur 92.29
2ih2_A 421 Modification methylase TAQI; DNA, DNA methyltransf 92.13
1nv8_A284 HEMK protein; class I adoMet-dependent methyltrans 92.13
3tma_A354 Methyltransferase; thump domain; 2.05A {Thermus th 92.06
1ws6_A171 Methyltransferase; structural genomics, riken stru 92.05
2frx_A 479 Hypothetical protein YEBU; rossmann-type S-adenosy 91.89
2yxl_A450 PH0851 protein, 450AA long hypothetical FMU protei 91.02
1boo_A 323 Protein (N-4 cytosine-specific methyltransferase P 90.94
1ne2_A200 Hypothetical protein TA1320; structural genomics, 89.98
2zig_A 297 TTHA0409, putative modification methylase; methylt 89.81
3k0b_A393 Predicted N6-adenine-specific DNA methylase; methy 89.58
3dou_A191 Ribosomal RNA large subunit methyltransferase J; c 89.35
3m4x_A 456 NOL1/NOP2/SUN family protein; mtase domain, PUA do 89.13
1uwv_A433 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m 89.13
3ajd_A274 Putative methyltransferase MJ0026; tRNA, M5C, ross 88.85
1ixk_A315 Methyltransferase; open beta sheet; 1.90A {Pyrococ 88.85
3ofk_A216 Nodulation protein S; NODS, N-methyltransferase, S 88.39
4df3_A233 Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; 88.37
3ldg_A384 Putative uncharacterized protein SMU.472; YPSC, me 88.17
4dmg_A393 Putative uncharacterized protein TTHA1493; rRNA, m 88.04
2yx1_A336 Hypothetical protein MJ0883; methyl transferase, t 87.92
2kw5_A202 SLR1183 protein; structural genomics, northeast st 87.58
1ve3_A227 Hypothetical protein PH0226; dimer, riken structur 87.41
2gpy_A233 O-methyltransferase; structural genomics, PSI, pro 87.4
3grz_A205 L11 mtase, ribosomal protein L11 methyltransferase 87.17
3ntv_A232 MW1564 protein; rossmann fold, putative methyltran 87.09
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 86.99
3ldu_A385 Putative methylase; structural genomics, PSI-2, pr 86.76
3hm2_A178 Precorrin-6Y C5,15-methyltransferase; alpha-beta-s 86.69
3v97_A 703 Ribosomal RNA large subunit methyltransferase L; Y 86.16
4dcm_A375 Ribosomal RNA large subunit methyltransferase G; 2 86.02
2as0_A396 Hypothetical protein PH1915; RNA methyltransferase 86.0
1o9g_A250 RRNA methyltransferase; antibiotic resistance, Se- 85.62
3bzb_A281 Uncharacterized protein; RED ALGA, protein structu 85.61
1eg2_A 319 Modification methylase RSRI; rossmann fold, exocyc 85.59
2oo3_A283 Protein involved in catabolism of external DNA; st 85.27
3v97_A703 Ribosomal RNA large subunit methyltransferase L; Y 84.94
2frn_A278 Hypothetical protein PH0793; structural genomics, 84.76
3tr6_A225 O-methyltransferase; cellular processes; HET: SAH; 84.72
2igt_A332 SAM dependent methyltransferase; alpha-beta sandwi 84.38
2pxx_A215 Uncharacterized protein MGC2408; structural genomi 84.28
1wxx_A382 TT1595, hypothetical protein TTHA1280; thermus the 84.14
3c0k_A396 UPF0064 protein YCCW; PUA domain, adoMet dependent 84.08
2esr_A177 Methyltransferase; structural genomics, hypothetic 83.97
2pjd_A343 Ribosomal RNA small subunit methyltransferase C; g 83.9
2avd_A229 Catechol-O-methyltransferase; structural genomics, 83.75
2ift_A201 Putative methylase HI0767; NESG, Y767_haein, struc 83.44
2ipx_A233 RRNA 2'-O-methyltransferase fibrillarin; FBL, stru 83.05
2g1p_A278 DNA adenine methylase; DAM methylation, GATC recog 81.95
2fhp_A187 Methylase, putative; alpha-beta-alpha sandwich, st 81.91
2qfm_A364 Spermine synthase; spermidine aminopropyltransfera 81.66
2b78_A385 Hypothetical protein SMU.776; structure genomics, 81.41
3gu3_A 284 Methyltransferase; alpha-beta protein, structural 81.15
3duw_A223 OMT, O-methyltransferase, putative; alternating of 80.5
2yxd_A183 Probable cobalt-precorrin-6Y C(15)-methyltransfer 80.23
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* Back     alignment and structure
Probab=97.21  E-value=0.0022  Score=55.67  Aligned_cols=172  Identities=17%  Similarity=0.224  Sum_probs=99.5

Q ss_pred             CCcHHHHHHHHHHHHHHHHhhHhhhcccccCCcccccCccccccc-----ccccChhHHHHHHHHHHhhcCCCCCeEEEE
Q 025067           44 MLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLS-----QFWYDAVTAETVAQEAVSLCSDSDSRVACI  118 (258)
Q Consensus        44 ~LSa~tLaAL~eF~~E~~~~~~~l~~~~~~~~~~~~~~~EDwqlS-----QFWYsd~Ta~~La~~l~~~a~~~~~~Iacl  118 (258)
                      .|+.+.++.|+++...+..+.---+         +....+-|.+.     ..+......+.|++.+++....+..+|+=|
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~p~~~---------i~g~~~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~~~~~~vLDl  116 (276)
T 2b3t_A           46 QLTDEQCQQLDALLTRRRDGEPIAH---------LTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDL  116 (276)
T ss_dssp             BCCHHHHHHHHHHHHHHHTTCCHHH---------HSCEEEETTEEEECCTTSCCCCTTHHHHHHHHHHHSCSSCCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHcCCChhH---------eeeeeEECCceEEeCCCCcccCchHHHHHHHHHHhcccCCCEEEEe
Confidence            5888999999998877654321100         01111222221     111222345666677666542256799999


Q ss_pred             eChhHHH--HHHhhCCCCCceEEeecccc--------cccC--C-ccccccCCCCCCchhhhccCccEEEECCCCCCH--
Q 025067          119 ACPTLYA--YLKKIRPEVSPKILEYDMRF--------EQYG--S-DFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSK--  183 (258)
Q Consensus       119 stPSly~--~lk~~~~~~~~~LLEyD~RF--------~~~g--~-~FvfYDyn~P~~lp~~lk~~fD~Vv~DPPFlse--  183 (258)
                      ||=|=..  .+.+..|..+++.+|++..-        ...|  . +|+.=|...+  ++   .++||+||++|||...  
T Consensus       117 G~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--~~---~~~fD~Iv~npPy~~~~~  191 (276)
T 2b3t_A          117 GTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--LA---GQQFAMIVSNPPYIDEQD  191 (276)
T ss_dssp             TCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG--GT---TCCEEEEEECCCCBCTTC
T ss_pred             cCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh--cc---cCCccEEEECCCCCCccc
Confidence            8865333  34444567789999998542        2222  1 4554455433  11   4689999999999764  


Q ss_pred             -----------------------HHHHHHHHHHHHhcCCCCCcEEEechHHHHHHHHHHh---CCcccceeec
Q 025067          184 -----------------------ECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELL---GLRPCGFRPQ  230 (258)
Q Consensus       184 -----------------------ec~eK~A~Tir~L~k~~~~kiil~Tg~~me~~i~kll---~~~~~~F~P~  230 (258)
                                             +...++...+..++++ ++.+++..|....+.+.+++   |++.....+.
T Consensus       192 ~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d  263 (276)
T 2b3t_A          192 PHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVS-GGFLLLEHGWQQGEAVRQAFILAGYHDVETCRD  263 (276)
T ss_dssp             HHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEE-EEEEEEECCSSCHHHHHHHHHHTTCTTCCEEEC
T ss_pred             cccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCC-CCEEEEEECchHHHHHHHHHHHCCCcEEEEEec
Confidence                                   2334455555555666 55788888766666666655   6666555544
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} Back     alignment and structure
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} Back     alignment and structure
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* Back     alignment and structure
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Back     alignment and structure
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 Back     alignment and structure
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} Back     alignment and structure
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A Back     alignment and structure
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28 Back     alignment and structure
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11 Back     alignment and structure
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* Back     alignment and structure
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} Back     alignment and structure
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* Back     alignment and structure
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} Back     alignment and structure
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* Back     alignment and structure
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* Back     alignment and structure
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* Back     alignment and structure
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} Back     alignment and structure
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 Back     alignment and structure
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} Back     alignment and structure
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} Back     alignment and structure
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 Back     alignment and structure
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 Back     alignment and structure
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A Back     alignment and structure
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str} Back     alignment and structure
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 Back     alignment and structure
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} Back     alignment and structure
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* Back     alignment and structure
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A Back     alignment and structure
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 Back     alignment and structure
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* Back     alignment and structure
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} Back     alignment and structure
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans} Back     alignment and structure
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} Back     alignment and structure
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* Back     alignment and structure
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A Back     alignment and structure
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} Back     alignment and structure
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile} Back     alignment and structure
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} Back     alignment and structure
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Back     alignment and structure
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 Back     alignment and structure
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A Back     alignment and structure
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} Back     alignment and structure
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A Back     alignment and structure
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59 Back     alignment and structure
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* Back     alignment and structure
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* Back     alignment and structure
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 Back     alignment and structure
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 Back     alignment and structure
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} Back     alignment and structure
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* Back     alignment and structure
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} Back     alignment and structure
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 Back     alignment and structure
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} Back     alignment and structure
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 Back     alignment and structure
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 Back     alignment and structure
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} Back     alignment and structure
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D* Back     alignment and structure
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 Back     alignment and structure
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* Back     alignment and structure
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A Back     alignment and structure
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* Back     alignment and structure
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query258
d1wy7a1201 Hypothetical protein PH1948 {Archaeon Pyrococcus h 96.83
d2b3ta1274 N5-glutamine methyltransferase, HemK {Escherichia 95.39
d1ne2a_197 Hypothetical protein Ta1320 {Archaeon Thermoplasma 95.36
d1nv8a_271 N5-glutamine methyltransferase, HemK {Thermotoga m 95.0
d2dpma_275 DNA methylase DpnM {Streptococcus pneumoniae [TaxI 94.58
d1dusa_194 Hypothetical protein MJ0882 {Archaeon Methanococcu 94.43
d1ws6a1171 Methyltransferase TTHA0928 {Thermus thermophilus [ 91.74
d2esra1152 Putative methyltransferase SPy1538 {Streptococcus 91.29
d1wxxa2318 Hypothetical protein TTHA1280, middle and C-termin 90.89
d2fhpa1182 Putative methylase EF2452 {Enterococcus faecalis [ 90.61
d2igta1309 Putative methyltransferase Atu0340 {Agrobacterium 90.23
d2ifta1183 Putative methylase HI0767 {Haemophilus influenzae 90.05
d2b78a2317 Hypothetical protein SMu776, middle and C-terminal 89.07
d1eg2a_ 279 m.RsrI N6 adenosine-specific DNA methyltransferase 87.59
d2as0a2324 Hypothetical protein PH1915, middle and C-terminal 86.28
d1g60a_ 256 Methyltransferase mboII {Moraxella bovis [TaxId: 4 85.93
d2fpoa1183 Methylase YhhF {Escherichia coli [TaxId: 562]} 85.28
d1booa_ 320 m.PvuII N4 cytosine-specific DNA methyltransferase 83.97
d1g8aa_227 Fibrillarin homologue {Archaeon Pyrococcus horikos 83.4
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.83  E-value=0.0027  Score=52.09  Aligned_cols=96  Identities=18%  Similarity=0.123  Sum_probs=63.2

Q ss_pred             cCc-ccccccccccChhHHHHHHHHHHhhcCCCCCeEEEEeChhHHHHHHhh-CCCCCceEEeecccc--------cccC
Q 025067           80 LVS-EDWRLSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKI-RPEVSPKILEYDMRF--------EQYG  149 (258)
Q Consensus        80 ~~~-EDwqlSQFWYsd~Ta~~La~~l~~~a~~~~~~IaclstPSly~~lk~~-~~~~~~~LLEyD~RF--------~~~g  149 (258)
                      .|+ -.|.|.||-=+.+.+..++..+....+-.+.+|+=+||=|=-..+.-. .+..+++.+|+|.+-        ..++
T Consensus        14 ~f~~~~~~l~qy~Tp~~~a~~~~~~~~~~~dl~g~~vLDlg~GtG~l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~   93 (201)
T d1wy7a1          14 GFKNPKVWLEQYRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK   93 (201)
T ss_dssp             CCSSCCGGGTCCCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT
T ss_pred             CCCCCCcccccCCCCHHHHHHHHHHHHhcCCCCCCEEEECcCcchHHHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcC
Confidence            444 478899987777777777765554433257899999988765554322 233589999999652        2233


Q ss_pred             C--ccccccCCCCCCchhhhccCccEEEECCCCCC
Q 025067          150 S--DFAFYDYNQPQDLPLELKHAFSVVVVDPPYLS  182 (258)
Q Consensus       150 ~--~FvfYDyn~P~~lp~~lk~~fD~Vv~DPPFls  182 (258)
                      .  +|+..|..       .+..+||+||+||||+.
T Consensus        94 ~~~~~~~~d~~-------~~~~~fD~Vi~nPP~~~  121 (201)
T d1wy7a1          94 GKFKVFIGDVS-------EFNSRVDIVIMNPPFGS  121 (201)
T ss_dssp             TSEEEEESCGG-------GCCCCCSEEEECCCCSS
T ss_pred             CCceEEECchh-------hhCCcCcEEEEcCcccc
Confidence            2  34444432       23568999999999975
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2dpma_ c.66.1.28 (A:) DNA methylase DpnM {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} Back     information, alignment and structure
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} Back     information, alignment and structure
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure