Citrus Sinensis ID: 025356

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
Protein Sequence
MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQKKWIRRLSNNRGKVL
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccEEEcccccccccccccccccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHccccccccccccccccHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
masnessaenaecrdKKIVSSCMllssafsqtpfvqpffkpllarntvpvaspniirDLQNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFChqvrcrnnvkmnplgnhnfaavlpgdsvgGLVVANGIMSFLNIYNTLLIVRLVLtwfpnsppaivsplstlcdpylnifrgiipplggtldlspILAFLVLNAITSAAaalpcelpvtglasqqaaspasipvstnlttpqKKWIRRLSNNRGKVL
Flexible Loop (DISEMBL)
masnessaenaecrdKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQaaspasipvstnlttpqkkwirrlsnnrgkvl
Low Complexity Region (SEG)
MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLasqqaaspasipvsTNLTTPQKKWIRRLSNNRGKVL
Disordered region (IsUnstruct)
****************KIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGL************************************
Disordered Region (DISOPRED)
******************VSSCMLLSS**********************************************LNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELP*********************TT*****************
Disordered Region (DISEMBL)
*************RDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTG************PVSTNLTTPQKKWIRRLSNNRGKVL
Disordered Region (DISPRO)
***************KKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELP****************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQKKWIRRLSNNRGKVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	254	2.2.26 [Sep-21-2011]
O78424	91	Uncharacterized protein y	yes	no	0.220	0.615	0.476	2e-06
O31729	90	Uncharacterized membrane	yes	no	0.275	0.777	0.402	4e-06
Q9TM45	91	Uncharacterized protein y	N/A	no	0.295	0.824	0.378	5e-06
P25254	197	Uncharacterized protein P	yes	no	0.362	0.467	0.342	0.0004
P28255	98	Uncharacterized protein y	N/A	no	0.318	0.826	0.340	0.0009

>sp|O78424|YCF19_GUITH Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 7/63 (11%)

Query: 149 RLVLTWFPN----SPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITS 204
           R+ LTWFPN      P     LS + DPYL +FRGI+PPL G +D+SPIL F++L  I  
Sbjct: 26  RVSLTWFPNVNWYGQP--FYSLSRITDPYLKMFRGIVPPLIG-IDISPILGFILLQCIMQ 82

Query: 205 AAA 207
             +
Sbjct: 83  IVS 85

Guillardia theta (taxid: 55529)

>sp|O31729|YLMG_BACSU Uncharacterized membrane protein YlmG OS=Bacillus subtilis (strain 168) GN=ylmG PE=3 SV=1

 Score = 52.0 bits (123), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 2/72 (2%)

Query: 139 LNIYNTLLIVRLVLTWFPNS-PPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFL 197
           + IY+  LI+ + ++W P++   A+   L+++C+PYL  FR IIPP+   LD+SPI+A L
Sbjct: 14  ITIYSFALIIYIFMSWVPSTRETAVGRFLASICEPYLEPFRKIIPPI-AMLDISPIVAIL 72

Query: 198 VLNAITSAAAAL 209
           VL   T+    L
Sbjct: 73  VLRFATTGLWGL 84

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q9TM45|YCF19_CYACA Uncharacterized protein ycf19 OS=Cyanidium caldarium GN=ycf19 PE=3 SV=1

 Score = 52.0 bits (123), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 127 GGLVVANGIMSFLNIYNTLLIVRLVLTWFPN----SPPAIVSPLSTLCDPYLNIFRGIIP 182
           G  ++    ++FL IY  L+++R+ L WFPN    S P     LS L DPYLN+F G+ P
Sbjct: 4   GTDLILETTIAFLQIYIVLILLRMSLGWFPNINWYSQP--FYSLSQLSDPYLNLFHGVFP 61

Query: 183 PLGGTLDLSPILAFLVLNAITS 204
              G +D SPI+   +++ I  
Sbjct: 62  SFLG-IDFSPIIGITLIDFIIE 82

Cyanidium caldarium (taxid: 2771)

>sp|P25254|Y392_PSEAE Uncharacterized protein PA0392 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0392 PE=3 SV=2

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 16/108 (14%)

Query: 123 GDSVGGLVVANGIMS-------FLNIYNTLLIVRLVLTWF-PNSPPAIVSPLSTLCDPYL 174
           G  VGG ++   I S       FL ++   LI+ ++L+W  P S       ++ +C+P L
Sbjct: 89  GYGVGGFIMQLLIWSIIAVTSLFLKVFFFALIISVILSWVAPGSYNPGAQLVNQICEPLL 148

Query: 175 NIFRGIIPPLGGTLDLSPILAFLVLNAI-------TSAAAALPCELPV 215
             FR ++P LGG LDLSPI AFL L  I        +A   +P +L +
Sbjct: 149 MPFRKLLPNLGG-LDLSPIFAFLALKLIDMLVINNLAAMTGMPQQLSI 195

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

>sp|P28255|YCF19_GALSU Uncharacterized protein ycf19 OS=Galdieria sulphuraria GN=ycf19 PE=3 SV=1

 Score = 44.3 bits (103), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 130 VVANGIMSFLNIYNTLLIVRLVLTWFPN----SPPAIVSPLSTLCDPYLNIFRGIIPPLG 185
           ++   I  F  IY   L +R+ L W       + P IV  L  L DPYLN+FRG +P + 
Sbjct: 12  IILGVITEFCRIYLFALSIRVFLAWIVTINWYTQPYIV--LKKLTDPYLNLFRGTLPLIL 69

Query: 186 GTLDLSPILAFLVLNAITSAAAALPCEL 213
           G +D S +L FL L  +     ++  E+
Sbjct: 70  G-MDFSSMLGFLFLECVIKLLESIYIEI 96

Galdieria sulphuraria (taxid: 130081)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
343887332	254	YGGT family protein [Citrus unshiu]	1.0	1.0	1.0	1e-142
359476279	252	PREDICTED: uncharacterized protein LOC10	0.937	0.944	0.616	2e-72
359807513	234	uncharacterized protein LOC100791676 [Gl	0.897	0.974	0.569	2e-67
356507086	244	PREDICTED: uncharacterized protein LOC10	0.921	0.959	0.569	8e-65
224088744	252	predicted protein [Populus trichocarpa]	0.917	0.924	0.562	2e-64
22326932	251	YGGT family protein [Arabidopsis thalian	0.807	0.816	0.609	1e-62
297812303	251	YGGT family protein [Arabidopsis lyrata	0.807	0.816	0.596	2e-60
255550183	216	conserved hypothetical protein [Ricinus	0.811	0.953	0.561	4e-60
226493494	248	uncharacterized protein LOC100274882 [Ze	0.830	0.850	0.562	4e-60
357465857	245	hypothetical protein MTR_3g105100 [Medic	0.897	0.930	0.540	1e-59

>gi|343887332|dbj|BAK61878.1| YGGT family protein [Citrus unshiu]

 Score =  508 bits (1309), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 254/254 (100%), Positives = 254/254 (100%)

Query: 1   MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQ 60
           MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQ
Sbjct: 1   MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQ 60

Query: 61  NSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAV 120
           NSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAV
Sbjct: 61  NSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAV 120

Query: 121 LPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGI 180
           LPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGI
Sbjct: 121 LPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGI 180

Query: 181 IPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQK 240
           IPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQK
Sbjct: 181 IPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQK 240

Query: 241 KWIRRLSNNRGKVL 254
           KWIRRLSNNRGKVL
Sbjct: 241 KWIRRLSNNRGKVL 254

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476279|ref|XP_002280034.2| PREDICTED: uncharacterized protein LOC100242172 [Vitis vinifera] gi|296081720|emb|CBI20725.3| unnamed protein product [Vitis vinifera]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/250 (61%), Positives = 175/250 (70%), Gaps = 12/250 (4%)

Query: 3   SNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVAS--PNIIRDLQ 60
           S ESS E A C      ++C LLSSAF QT F  PF +P   + T+P  S  P+ IR   
Sbjct: 5   STESSTERARCAAPNWAANCPLLSSAFLQTSF-PPFLRP--TKLTLPETSGVPDFIRQFH 61

Query: 61  NSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAV 120
           +SV S T +    L   AS NP + +  SLSA F     Q+ CR    +NPL N NFAA+
Sbjct: 62  SSVASATQRCVALLQLFASQNPFLNRLSSLSAHFS----QIHCRKQRNLNPLSNQNFAAI 117

Query: 121 LPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGI 180
           LPGDSV G+VVANGI++FLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGI
Sbjct: 118 LPGDSVAGIVVANGILNFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGI 177

Query: 181 IPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQK 240
           IPPLGGTLDLSPILAFLVLNA TS AAALP ELP+ G+  Q    P+S     +LTT QK
Sbjct: 178 IPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPMAGVPQQ---IPSSHTRLFDLTTTQK 234

Query: 241 KWIRRLSNNR 250
           KW+RRL  NR
Sbjct: 235 KWMRRLCGNR 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807513|ref|NP_001240890.1| uncharacterized protein LOC100791676 [Glycine max] gi|255638926|gb|ACU19765.1| unknown [Glycine max]

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/253 (56%), Positives = 175/253 (69%), Gaps = 25/253 (9%)

Query: 1   MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQ 60
           MA+N+SS E     D K +S+C       +Q PF  P            ++SP   + L 
Sbjct: 1   MAANDSSTE----IDTKKLSNCW----GNAQMPFALPTL----------LSSPP--QHLH 40

Query: 61  NSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAV 120
            S  +  D   +FL+SLASHN  + K LSL +EFH+ C Q+  + NV++  +  HNFAAV
Sbjct: 41  TSFTTAADNFFRFLHSLASHNSFLNKILSLPSEFHTLCVQIGKQRNVRL--VSGHNFAAV 98

Query: 121 LPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGI 180
           LPGDSV GLVVANG+++FLNIYNTLLIVRLVLTWFPN+PP+IVSPLST+CDPYLNIFRG+
Sbjct: 99  LPGDSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRGL 158

Query: 181 IPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQK 240
           IPPLGGTLDLSPILAFLVLNA TS A+ALP ELPVT  + Q  A+P     STNLTT QK
Sbjct: 159 IPPLGGTLDLSPILAFLVLNAFTSTASALPAELPVTEQSKQGLAAPLH---STNLTTSQK 215

Query: 241 KWIRRLSNNRGKV 253
           KW+ R   NR + 
Sbjct: 216 KWLTRFQGNRSRT 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507086|ref|XP_003522302.1| PREDICTED: uncharacterized protein LOC100802756 [Glycine max]

 Score =  253 bits (645), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 143/251 (56%), Positives = 174/251 (69%), Gaps = 17/251 (6%)

Query: 3   SNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNS 62
           +N+ S E  +C  K  VS+C        Q PF  PF     +  T  ++SP  +  L  S
Sbjct: 5   ANDLSTE-IDCTKK--VSNCW----GNGQIPFALPFLTLPNSNFTTLLSSPPQL--LHTS 55

Query: 63  VISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLP 122
             +  D   +F++SLAS NP + K LSL AEFH+ C Q+R + NV +  + +HNFAAVLP
Sbjct: 56  FTTAADNFFRFVHSLASQNPFLNKVLSLPAEFHTLCVQIRKQRNVGL--VSSHNFAAVLP 113

Query: 123 GDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIP 182
           G SV GLVVANG+++FLNIYNTLLIVRLVLTWFPN+PP+IVSPLST+CDPYLNIFRG+IP
Sbjct: 114 GGSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRGLIP 173

Query: 183 PLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQKKW 242
           PLGGTLDLSPILAFLVLNA TS AAALP ELPVT  + Q  A+P  +P     TT QKKW
Sbjct: 174 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVTEQSKQGLAAP--LPS----TTSQKKW 227

Query: 243 IRRLSNNRGKV 253
           +RR   NR + 
Sbjct: 228 MRRFQGNRSRT 238

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088744|ref|XP_002308522.1| predicted protein [Populus trichocarpa] gi|222854498|gb|EEE92045.1| predicted protein [Populus trichocarpa]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/258 (56%), Positives = 181/258 (70%), Gaps = 25/258 (9%)

Query: 4   NESSAE--NAECRDKKIVSSCM-LLSSAFSQTPFVQPFFKPLLARNTVPVASPNI-IRDL 59
           NE+  E  N++C+      + M LLSS+  Q P    F +P + +N      P+I + +L
Sbjct: 5   NENCLEKTNSKCQAPIFAPNSMVLLSSSILQNPL---FLRPPIKQN------PSIFMGEL 55

Query: 60  QNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSF-----CHQVRCRNNVKMNPLGN 114
            NS+ S  DK  +FL+S AS NP+++  ++   +F+       C +  CR N+  N L N
Sbjct: 56  HNSITSAADKCLRFLHSFASRNPILKNIVT---DFNQHMTRIQCRREYCRRNMN-NYLSN 111

Query: 115 HNFAAVLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYL 174
           HNFAAVLPGDSV GLVVANGI++FLNIYNTLL+VRLVLTWFPNSPPAIVSPLSTLCDPYL
Sbjct: 112 HNFAAVLPGDSVAGLVVANGIINFLNIYNTLLVVRLVLTWFPNSPPAIVSPLSTLCDPYL 171

Query: 175 NIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTN 234
           NIFRGIIPPLGGTLDLSPILAFLVLNA TS A ALP ELP  G + +  +SP    + T+
Sbjct: 172 NIFRGIIPPLGGTLDLSPILAFLVLNAFTSTATALPAELPENGASPRSRSSPT---LFTH 228

Query: 235 LTTPQKKWIRRLSNNRGK 252
           LTT QKKW+RRL+ N+ +
Sbjct: 229 LTTAQKKWMRRLNGNKSR 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22326932|ref|NP_680180.1| YGGT family protein [Arabidopsis thaliana] gi|13374851|emb|CAC34485.1| putative protein [Arabidopsis thaliana] gi|26451921|dbj|BAC43053.1| unknown protein [Arabidopsis thaliana] gi|28950811|gb|AAO63329.1| At5g21920 [Arabidopsis thaliana] gi|29294067|gb|AAO73904.1| expressed protein [Arabidopsis thaliana] gi|332005571|gb|AED92954.1| YGGT family protein [Arabidopsis thaliana]

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/223 (60%), Positives = 164/223 (73%), Gaps = 18/223 (8%)

Query: 25  LSSAFSQTPFVQPFFKPLLARNTVPVA-SPNIIRDLQNSVISITDKVSKFLNSLASHNPL 83
           LSSAF+QTP V+     LL     PVA S  +I+D   S+IS T+K   FL+SLAS NPL
Sbjct: 28  LSSAFTQTPLVRSNKPNLLL--LPPVADSVKLIQDFHQSLISATEKFKGFLHSLASKNPL 85

Query: 84  IQKFLSLSAEFHSFCHQVRCRNNVKMN-PLGNHNFAAVLPGDSVGGLVVANGIMSFLNIY 142
            Q+ + LS+EFH  C ++R RN  ++   + NH FAAVLPGDSV GLVVANG+++FLNIY
Sbjct: 86  FQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINFLNIY 145

Query: 143 NTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAI 202
           NT+L+VRLVLTWFP++PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLVLNA 
Sbjct: 146 NTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLVLNAF 204

Query: 203 TSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQKKWIRR 245
           TS+A ALPCELP    ++  A SPAS          + KW+RR
Sbjct: 205 TSSAMALPCELP----SADGAVSPAS---------SETKWVRR 234

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812303|ref|XP_002874035.1| YGGT family protein [Arabidopsis lyrata subsp. lyrata] gi|297319872|gb|EFH50294.1| YGGT family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/223 (59%), Positives = 163/223 (73%), Gaps = 18/223 (8%)

Query: 25  LSSAFSQTPFVQPFFKPLLARNTVPVA-SPNIIRDLQNSVISITDKVSKFLNSLASHNPL 83
           LSSAF+QTP V+     LL     PVA S  +I+D   S++S T+K S F +SLAS NPL
Sbjct: 28  LSSAFTQTPLVRSNKPNLLL--LPPVADSVKLIQDFHRSLVSATEKFSGFFHSLASKNPL 85

Query: 84  IQKFLSLSAEFHSFCHQVRCRNNVKMN-PLGNHNFAAVLPGDSVGGLVVANGIMSFLNIY 142
            Q+ + LS+EF   C ++R +N  ++   + NH FAAVLPGDSV GLVVANG+++FLNIY
Sbjct: 86  FQEAVRLSSEFRLLCDEIRLKNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINFLNIY 145

Query: 143 NTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAI 202
           NT+L+VRLVLTWFP++PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLVLNA 
Sbjct: 146 NTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLVLNAF 204

Query: 203 TSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQKKWIRR 245
           TS+A ALPCELP           PA   VS  L++ + KW+RR
Sbjct: 205 TSSAMALPCELP-----------PAEGAVS--LSSSETKWMRR 234

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550183|ref|XP_002516142.1| conserved hypothetical protein [Ricinus communis] gi|223544628|gb|EEF46144.1| conserved hypothetical protein [Ricinus communis]

 Score =  237 bits (604), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 141/251 (56%), Positives = 164/251 (65%), Gaps = 45/251 (17%)

Query: 1   MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNI-IRDL 59
           MAS E+S EN++    K V +C+ LSS  SQ PF+   FKP+    T+P  SPN  +R+L
Sbjct: 1   MASTEASMENSKGIVPKFVPNCVFLSSWVSQNPFLIRPFKPI----TLP--SPNCALREL 54

Query: 60  QNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAA 119
             S+ S  DK  K L+   S++                            N L NHNFAA
Sbjct: 55  HTSLASTADKCFKILHLAYSNS----------------------------NYLSNHNFAA 86

Query: 120 VLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRG 179
           VLPGDSV G+VVANGI++FLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRG
Sbjct: 87  VLPGDSVAGIVVANGILNFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRG 146

Query: 180 IIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQ 239
           IIPPLGGTLDLSPILAFLVLNA TS AAALP ELP  G ++          + T  TT Q
Sbjct: 147 IIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPGKGAST----------LHTRFTTSQ 196

Query: 240 KKWIRRLSNNR 250
           +KW+RRL  N+
Sbjct: 197 QKWMRRLYGNK 207

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226493494|ref|NP_001142613.1| uncharacterized protein LOC100274882 [Zea mays] gi|195607320|gb|ACG25490.1| hypothetical protein [Zea mays]

 Score =  237 bits (604), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/233 (56%), Positives = 170/233 (72%), Gaps = 22/233 (9%)

Query: 25  LSSAFSQTPFVQPFFKPLLARNTVPVASPNI--IRDLQNSVISITDKVSKFLNSLASHNP 82
           LSSAF+QTP V+   KP L    +P AS ++  I+D   S++S T+K + F +SLA+ NP
Sbjct: 28  LSSAFTQTPSVRTN-KPSL--RLLPPASDSVKLIQDFHRSLLSATEKFAGFFHSLAAENP 84

Query: 83  LIQKFLSLSAEFHSFCHQVRCRNNVKMN-PLGNHNFAAVLPGDSVGGLVVANGIMSFLNI 141
           L Q+ + LS+EF   C ++R RN  ++   + +H FAAVLPGDSV G+VVANG+++FLNI
Sbjct: 85  LFQEAVRLSSEFRGVCDEIRLRNTTRVRLAMSDHGFAAVLPGDSVAGMVVANGLINFLNI 144

Query: 142 YNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNA 201
           YNT+L+VRLVLTWFP +PPAIV+PLSTLCDPYLNIFRG+IPPLGG LDLSPILAFLVLNA
Sbjct: 145 YNTVLVVRLVLTWFPTAPPAIVNPLSTLCDPYLNIFRGVIPPLGG-LDLSPILAFLVLNA 203

Query: 202 ITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQKKWI--RRLSNNRGK 252
            TS+A ALPCELP     ++   SP+S          + KW+  RRLS+N+ +
Sbjct: 204 FTSSAMALPCELP----PAEGVTSPSSC---------ETKWMRRRRLSSNQNQ 243

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465857|ref|XP_003603213.1| hypothetical protein MTR_3g105100 [Medicago truncatula] gi|355492261|gb|AES73464.1| hypothetical protein MTR_3g105100 [Medicago truncatula]

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/244 (54%), Positives = 162/244 (66%), Gaps = 16/244 (6%)

Query: 4   NESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSV 63
           N   +   +   KK VS C       SQ+    PF K  ++  + P         L  S+
Sbjct: 5   NGCDSSTTDTETKKNVSFCW----GNSQSTLAFPFLKSPISNFSPP--------QLPTSI 52

Query: 64  ISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNH-NFAAVLP 122
            +  D  SK L+SLAS NP + K LSLS++FH  C Q+RC N      + NH NFAAVLP
Sbjct: 53  SNAVDNCSKLLHSLASQNPFLNKLLSLSSQFHDTCVQIRCSNYSNSRWVSNHHNFAAVLP 112

Query: 123 GDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIP 182
           GDSV GLVVANG+ +FL++YNTLL+ RLVLTWFPN+PPAIV+PLST+CDPYLN+FRG+IP
Sbjct: 113 GDSVAGLVVANGLNNFLSLYNTLLVARLVLTWFPNAPPAIVAPLSTVCDPYLNVFRGLIP 172

Query: 183 PLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQKKW 242
           PLGG LDLSPILAFLVLNA TS AAALP ELPVT  + Q   +    P  T++T+ Q KW
Sbjct: 173 PLGG-LDLSPILAFLVLNAFTSTAAALPAELPVTEQSKQGLEARLQQP--TDVTSSQNKW 229

Query: 243 IRRL 246
           +RRL
Sbjct: 230 MRRL 233

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
TAIR|locus:504956451	251	YLMG2 "AT5G21920" [Arabidopsis	0.736	0.745	0.666	9e-61
TAIR|locus:2079656	232	YLMG1-1 "AT3G07430" [Arabidops	0.295	0.323	0.545	6.7e-17
TAIR|locus:2132907	218	YLMG1-2 "AT4G27990" [Arabidops	0.295	0.344	0.532	1.1e-16
UNIPROTKB|Q3AAH5	87	CHY_2040 "Putative uncharacter	0.271	0.793	0.478	7.1e-13
TIGR_CMR|CHY_2040	87	CHY_2040 "conserved hypothetic	0.271	0.793	0.478	7.1e-13
UNIPROTKB|Q81WE1	87	BAS3749 "YlmG protein" [Bacill	0.291	0.850	0.368	7.1e-10
TIGR_CMR|BA_4037	87	BA_4037 "ylmG protein" [Bacill	0.291	0.850	0.368	7.1e-10
UNIPROTKB|Q47XY7	181	CPS_3665 "YGGT family protein"	0.326	0.458	0.363	5.4e-08
TIGR_CMR|CPS_3665	181	CPS_3665 "YGGT family protein"	0.326	0.458	0.363	5.4e-08
UNIPROTKB|Q74EU3	104	GSU0866 "Uncharacterized prote	0.295	0.721	0.376	1.6e-05

TAIR|locus:504956451 YLMG2 "AT5G21920" [Arabidopsis thaliana (taxid:3702)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 128/192 (66%), Positives = 152/192 (79%)

Query:    25 LSSAFSQTPFVQPFFKPLLARNTVPVA-SPNIIRDLQNSVISITDKVSKFLNSLASHNPL 83
             LSSAF+QTP V+   KP L     PVA S  +I+D   S+IS T+K   FL+SLAS NPL
Sbjct:    28 LSSAFTQTPLVRSN-KPNLLL-LPPVADSVKLIQDFHQSLISATEKFKGFLHSLASKNPL 85

Query:    84 IQKFLSLSAEFHSFCHQVRCRNNVKMN-PLGNHNFAAVLPGDSVGGLVVANGIMSFLNIY 142
              Q+ + LS+EFH  C ++R RN  ++   + NH FAAVLPGDSV GLVVANG+++FLNIY
Sbjct:    86 FQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINFLNIY 145

Query:   143 NTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAI 202
             NT+L+VRLVLTWFP++PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLVLNA 
Sbjct:   146 NTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLVLNAF 204

Query:   203 TSAAAALPCELP 214
             TS+A ALPCELP
Sbjct:   205 TSSAMALPCELP 216

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2079656 YLMG1-1 "AT3G07430" [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 42/77 (54%), Positives = 57/77 (74%)

Query:   130 VVANGIMSFLNIYNTLLIVRLVLTWFPNSP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
             VVA GI  +L+IY+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct:   149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query:   188 LDLSPILAFLVLNAITS 204
             LD+SP+LAF VL  + S
Sbjct:   209 LDVSPLLAFAVLGTLGS 225

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016020 "membrane" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0010020 "chloroplast fission" evidence=IMP

GO:0042651 "thylakoid membrane" evidence=IDA

GO:0090143 "nucleoid organization" evidence=IMP

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

TAIR|locus:2132907 YLMG1-2 "AT4G27990" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 41/77 (53%), Positives = 57/77 (74%)

Query:   130 VVANGIMSFLNIYNTLLIVRLVLTWFPNSP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
             VVA G+  +L+IY+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct:   135 VVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDT 194

Query:   188 LDLSPILAFLVLNAITS 204
             LD+SP+LAF VL  + S
Sbjct:   195 LDVSPLLAFAVLGTLGS 211

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

UNIPROTKB|Q3AAH5 CHY_2040 "Putative uncharacterized protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 34/71 (47%), Positives = 50/71 (70%)

Query:   140 NIYNTLLIVRLVLTWFP-NSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 198
             NIY  L+I+R++LTW P N+   +V+ +++L DPYLN+FR +IPP+G  +D SPI+AF V
Sbjct:    13 NIYGWLIIIRVLLTWIPVNTYHPVVNFITSLTDPYLNLFRRLIPPVG-MIDFSPIVAFFV 71

Query:   199 LNAITSAAAAL 209
             L  +  A   L
Sbjct:    72 LEVMRMAVLQL 82

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_2040 CHY_2040 "conserved hypothetical protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 34/71 (47%), Positives = 50/71 (70%)

Query:   140 NIYNTLLIVRLVLTWFP-NSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 198
             NIY  L+I+R++LTW P N+   +V+ +++L DPYLN+FR +IPP+G  +D SPI+AF V
Sbjct:    13 NIYGWLIIIRVLLTWIPVNTYHPVVNFITSLTDPYLNLFRRLIPPVG-MIDFSPIVAFFV 71

Query:   199 LNAITSAAAAL 209
             L  +  A   L
Sbjct:    72 LEVMRMAVLQL 82

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81WE1 BAS3749 "YlmG protein" [Bacillus anthracis (taxid:1392)]

 Score = 143 (55.4 bits), Expect = 7.1e-10, P = 7.1e-10
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query:   135 IMSFLNIYNTLLIVRLVLTWFPNSPPAIVSP-LSTLCDPYLNIFRGIIPPLGGTLDLSPI 193
             +++ + IY+  LI+ ++L+WFP +  +     L+ +C+PYL  FR  IPPLG  +D+SP+
Sbjct:     8 LVTAIEIYSWALIIYILLSWFPGAKESTFGDFLARICEPYLEPFRRFIPPLG-MIDISPL 66

Query:   194 LAFLVLNAITSAAAAL 209
             +A   L   TS    L
Sbjct:    67 VAIFALKLATSGLVTL 82

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_4037 BA_4037 "ylmG protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 143 (55.4 bits), Expect = 7.1e-10, P = 7.1e-10
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query:   135 IMSFLNIYNTLLIVRLVLTWFPNSPPAIVSP-LSTLCDPYLNIFRGIIPPLGGTLDLSPI 193
             +++ + IY+  LI+ ++L+WFP +  +     L+ +C+PYL  FR  IPPLG  +D+SP+
Sbjct:     8 LVTAIEIYSWALIIYILLSWFPGAKESTFGDFLARICEPYLEPFRRFIPPLG-MIDISPL 66

Query:   194 LAFLVLNAITSAAAAL 209
             +A   L   TS    L
Sbjct:    67 VAIFALKLATSGLVTL 82

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q47XY7 CPS_3665 "YGGT family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 131 (51.2 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 32/88 (36%), Positives = 51/88 (57%)

Query:   119 AVLPGDSVGGLVVANGIMSFLN----IYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYL 174
             A L G+S+G L    G++  L     +   ++I+  +++W      + +  LS L +P+L
Sbjct:    81 AALSGESLGVLAFYIGLLVLLKQAGFLLFVIMIIMAIMSWVVQGYNSTLMVLSQLTEPFL 140

Query:   175 NIFRGIIPPLGGTLDLSPILAFLVLNAI 202
             N  R IIP +GG LDLS +LAFL++N I
Sbjct:   141 NPIRKIIPNMGG-LDLSMLLAFLLMNVI 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_3665 CPS_3665 "YGGT family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 131 (51.2 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 32/88 (36%), Positives = 51/88 (57%)

Query:   119 AVLPGDSVGGLVVANGIMSFLN----IYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYL 174
             A L G+S+G L    G++  L     +   ++I+  +++W      + +  LS L +P+L
Sbjct:    81 AALSGESLGVLAFYIGLLVLLKQAGFLLFVIMIIMAIMSWVVQGYNSTLMVLSQLTEPFL 140

Query:   175 NIFRGIIPPLGGTLDLSPILAFLVLNAI 202
             N  R IIP +GG LDLS +LAFL++N I
Sbjct:   141 NPIRKIIPNMGG-LDLSMLLAFLLMNVI 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q74EU3 GSU0866 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 105 (42.0 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 29/77 (37%), Positives = 42/77 (54%)

Query:   129 LVVANGIMSFLNIYNTLLIVRLVLTWF-PNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
             L +A      L IY  ++I R +++W  P+    IV+ L    +P L+  R I+P LGG 
Sbjct:     9 LAIAKVADILLTIYLYIIIARAIISWVNPDPYNPIVNFLYRSTEPVLSRVRRILPDLGG- 67

Query:   188 LDLSPILAFLVLNAITS 204
             LDLSPIL  + +  I S
Sbjct:    68 LDLSPILVLVAIYFIQS 84

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_VI0693 hypothetical protein (253 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	254
pfam02325	75	pfam02325, YGGT, YGGT family	6e-16
COG0762	96	COG0762, COG0762, Predicted integral membrane prot	5e-12

>gnl|CDD|216974 pfam02325, YGGT, YGGT family

 Score = 70.2 bits (173), Expect = 6e-16
 Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 2/69 (2%)

Query: 135 IMSFLNIYNTLLIVRLVLTWFPNSP-PAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPI 193
           + + LNIY  LLI+R++L+W P  P   IV  L  L +P L  FR IIPP+GG +DLSPI
Sbjct: 1   LSTLLNIYIFLLIIRVILSWVPADPYNPIVQFLYRLTEPLLRPFRRIIPPIGG-IDLSPI 59

Query: 194 LAFLVLNAI 202
           +AFL+L  +
Sbjct: 60  VAFLLLQFL 68

This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown. Length = 75

>gnl|CDD|223833 COG0762, COG0762, Predicted integral membrane protein [Function unknown]

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 3/70 (4%)

Query: 135 IMSFLNIYNTLLIVRLVLTWFPNSPPA--IVSPLSTLCDPYLNIFRGIIPPLGGTLDLSP 192
           ++  + +Y  LL++R +L+WFP +     I   L+ L +P L  FR +IPPLGG +D SP
Sbjct: 14  LLILIGVYIFLLLIRALLSWFPPAGETNPIGRLLAQLTEPLLRPFRRLIPPLGG-IDFSP 72

Query: 193 ILAFLVLNAI 202
           I+A L+L  +
Sbjct: 73  IVALLILQFL 82

Length = 96

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	254
PF02325	75	YGGT: YGGT family; InterPro: IPR003425 This family	99.78
COG0762	96	Predicted integral membrane protein [Function unkn	99.69
PF02325	75	YGGT: YGGT family; InterPro: IPR003425 This family	98.79
COG0762	96	Predicted integral membrane protein [Function unkn	97.64

>PF02325 YGGT: YGGT family; InterPro: IPR003425 This family represents Ycf19

Probab=99.78  E-value=5.7e-19  Score=132.22  Aligned_cols=73  Identities=37%  Similarity=0.775  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCC-CcchHHHHHhhhhHHHhhhhhhcCCCCCccchHHHHHHHHHHHHHHHHHH
Q 025356          135 IMSFLNIYNTLLIVRLVLTWFPNS-PPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAA  208 (254)
Q Consensus       135 L~~ll~Iy~~lLLIRaILSWvp~~-~npI~~~L~qLTEPiL~PfRRIIP~iGG~IDfSPLValLvL~lL~~ll~~  208 (254)
                      ++.++++|.+++++|+++||++.+ +||+.++++++|||+++|+||++|++|| +|+||+++++++++++.++.+
T Consensus         1 l~~~~~~~~~~i~~r~ilsw~~~~~~~~~~~~i~~~TeP~l~p~r~~ip~~g~-iD~S~lv~~~~l~~l~~~l~~   74 (75)
T PF02325_consen    1 LNTLLSIYIWLIILRFILSWFPANPYNPFVQFIYRITEPILRPFRRIIPPIGG-IDFSPLVALIVLQFLKIILVG   74 (75)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCccccChHHHHHHHHhhHHHHHHHHHcCCCCC-ccHHHHHHHHHHHHHHHHHhc
Confidence            367899999999999999999876 6899999999999999999999999999 999999999999999988754

It is associated with phototrophic organisms and may therefore play a role in photosynthesis, despite its wider association with bacteria outside of the cyanobacteria. ; GO: 0016020 membrane

>COG0762 Predicted integral membrane protein [Function unknown]

Probab=99.69  E-value=1.6e-16  Score=125.41  Aligned_cols=75  Identities=39%  Similarity=0.755  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCC--cchHHHHHhhhhHHHhhhhhhcCCCCCccchHHHHHHHHHHHHHHHHHHc
Q 025356          134 GIMSFLNIYNTLLIVRLVLTWFPNSP--PAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSAAAAL  209 (254)
Q Consensus       134 LL~~ll~Iy~~lLLIRaILSWvp~~~--npI~~~L~qLTEPiL~PfRRIIP~iGG~IDfSPLValLvL~lL~~ll~~L  209 (254)
                      .+..++..|.+.++++.++||+++.+  +++.++++++|||+++|+||++|++|| +|+||+++++++++++.++.++
T Consensus        13 ~l~~~i~~~~~~~ii~~~lsw~~~~~~~~~i~~~l~~lteP~L~p~Rr~ip~lgg-iD~Spiv~iliL~~l~~~l~~~   89 (96)
T COG0762          13 VLLILIGVYIFLLLIRALLSWFPPAGETNPIGRLLAQLTEPLLRPFRRLIPPLGG-IDFSPIVALLILQFLQFFLIRL   89 (96)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCcccCHHHHHHHHhhHhHHHHHHhCCCccC-chHHHHHHHHHHHHHHHHHHHH
Confidence            56788999999999999999998864  499999999999999999999999999 9999999999999999887663

>PF02325 YGGT: YGGT family; InterPro: IPR003425 This family represents Ycf19

Probab=98.79  E-value=5e-09  Score=78.48  Aligned_cols=53  Identities=15%  Similarity=0.204  Sum_probs=48.5

Q ss_pred             HHHHHHHHHhhcccCCchHHHHHhhhhhhhhhcccccccccccccc-CCCCchhhhHHHHHH
Q 025356           66 ITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNP-LGNHNFAAVLPGDSV  126 (254)
Q Consensus        66 ~~~~~~~~~~r~~~~NP~sQfi~k~T~pl~~~~~~~~v~PlrriiP-~g~iD~Aall~a~lv  126 (254)
                      ..=|+...|.+.+.+||+.|+++++|||+        ++|+||++| .|++|++++++.+++
T Consensus        12 i~~r~ilsw~~~~~~~~~~~~i~~~TeP~--------l~p~r~~ip~~g~iD~S~lv~~~~l   65 (75)
T PF02325_consen   12 IILRFILSWFPANPYNPFVQFIYRITEPI--------LRPFRRIIPPIGGIDFSPLVALIVL   65 (75)
T ss_pred             HHHHHHHHhcCccccChHHHHHHHHhhHH--------HHHHHHHcCCCCCccHHHHHHHHHH
Confidence            34588889999999999999999999999        999999999 999999999977666

It is associated with phototrophic organisms and may therefore play a role in photosynthesis, despite its wider association with bacteria outside of the cyanobacteria. ; GO: 0016020 membrane

>COG0762 Predicted integral membrane protein [Function unknown]

Probab=97.64  E-value=8.5e-05  Score=58.83  Aligned_cols=49  Identities=16%  Similarity=0.307  Sum_probs=40.8

Q ss_pred             HHHHHhhcccCCchHHHHHhhhhhhhhhcccccccccccccc-CCCCchhhhHHHHHH
Q 025356           70 VSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNP-LGNHNFAAVLPGDSV  126 (254)
Q Consensus        70 ~~~~~~r~~~~NP~sQfi~k~T~pl~~~~~~~~v~PlrriiP-~g~iD~Aall~a~lv  126 (254)
                      +..-+...+..||+.|++.+.|+|+        ++|+||++| +|++|++.+++.+++
T Consensus        30 ~lsw~~~~~~~~~i~~~l~~lteP~--------L~p~Rr~ip~lggiD~Spiv~iliL   79 (96)
T COG0762          30 LLSWFPPAGETNPIGRLLAQLTEPL--------LRPFRRLIPPLGGIDFSPIVALLIL   79 (96)
T ss_pred             HHHhcCCCCcccCHHHHHHHHhhHh--------HHHHHHhCCCccCchHHHHHHHHHH
Confidence            3344445555679999999999999        999999999 999999999976665

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00