Citrus Sinensis ID: 025372

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
Protein Sequence
MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Secondary Structure (PSIPRED)
ccHHHHHHHHHcccccccccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHccccccEEcccccHHHHEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mlaregerekvgdkpvkyhgkwpfrrvygIQEPVAVALSALNLSIQFHGWMSFFILLYYklplrpdkktyyeYTGLWHIYGILAMNSWFWSAVFHSrdvelteklDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAgvtrhpsrWKLWLVVVGEGLAMLLQiydfppyrgfvdahaLYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Flexible Loop (DISEMBL)
mlaregerekvgdkpvkyhgkwpfRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Low Complexity Region (SEG)
MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Disordered region (IsUnstruct)
***************VKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFR*********
Disordered Region (DISOPRED)
*****GEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPL*P*KKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTAL*****
Disordered Region (DISEMBL)
*************KPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Disordered Region (DISPRO)
*****G****VGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALL****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	254	2.2.26 [Sep-21-2011]
Q0VFE3	316	Post-GPI attachment to pr	yes	no	0.877	0.705	0.336	6e-31
A8WFS8	316	Post-GPI attachment to pr	yes	no	0.893	0.718	0.343	7e-30
Q68EV0	317	Post-GPI attachment to pr	N/A	no	0.877	0.703	0.344	2e-29
A2A559	320	Post-GPI attachment to pr	yes	no	0.870	0.690	0.334	5e-29
Q7K0P4	326	Post-GPI attachment to pr	yes	no	0.834	0.650	0.316	7e-29
Q9P6N9	331	Protein PER1 homolog OS=S	yes	no	0.858	0.658	0.331	3e-28
Q96FM1	320	Post-GPI attachment to pr	yes	no	0.870	0.690	0.326	5e-27
A7YWP2	319	Post-GPI attachment to pr	yes	no	0.862	0.686	0.337	8e-27
A2V7M9	320	Post-GPI attachment to pr	yes	no	0.870	0.690	0.321	2e-26
P25625	357	Protein PER1 OS=Saccharom	yes	no	0.901	0.641	0.270	1e-12

>sp|Q0VFE3|PGAP3_XENTR Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis GN=pgap3 PE=2 SV=1

 Score =  134 bits (337), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 10  KVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKT 69
           K G +  ++HGKWPF R    QEP +   S LN      G  S  +LL Y+  +    + 
Sbjct: 77  KEGHEVPQFHGKWPFSRFLFFQEPASALASFLN------GVASLLMLLRYRSSVPSSCQM 130

Query: 70  YYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVR 129
           Y         + ++++N+WFWS +FH+RD  LTEK+D   A +++  +  L  +R F ++
Sbjct: 131 YRTCLA----FSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGLQ 186

Query: 130 DEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR--HP 187
             +      A L+     H+ YL   + D+  NM      GV  L+ W  W    R   P
Sbjct: 187 YPSIANGFGAFLVLLFACHVSYLTLGRFDYSYNMAANTGFGVLNLMWWLAWCFRRRFHQP 246

Query: 188 SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
             WK  LVV+      LL++ DFPP    +DAHAL+H + +PL +L++SF++DDS
Sbjct: 247 YLWKCVLVVISLQSLALLELLDFPPVMWILDAHALWHFSTVPLHFLFYSFLKDDS 301

Involved in the lipid remodeling steps of GPI-anchor maturation.
Xenopus tropicalis (taxid: 8364)

>sp|A8WFS8|PGAP3_DANRE Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3 PE=2 SV=1

 Score =  130 bits (328), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 12/239 (5%)

Query: 6   GEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRP 65
           G  +  G    ++HGKWPF R    +EP +   S LN      G     +LL Y+  +  
Sbjct: 74  GLYQAEGYSIPQFHGKWPFARFLCFEEPASALASLLN------GLACLLMLLRYRSAVPC 127

Query: 66  DKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRA 125
               Y+  T     + ++++N+WFWS VFH+RD  LTEK+D   A A++ ++  L  +R 
Sbjct: 128 QSPMYHTITA----FSLVSLNAWFWSTVFHTRDTYLTEKMDYFCASAVILYSIYLCCVRT 183

Query: 126 FSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR 185
             +R  A   MV   LI   T+H+ YL F   D+G NM    ++G+  LL W  W  + R
Sbjct: 184 LGLRRPAISSMVGVLLILAFTSHVSYLTFVSFDYGYNMAANASIGIINLLWWLCWCWLNR 243

Query: 186 H--PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
              P  W+  +VV+      LL++ DFPP    +DAHA++H + +P+ +L++SF+ DDS
Sbjct: 244 RILPYWWRCGMVVLLLHGLALLELLDFPPLFWVLDAHAVWHLSTVPVHFLFYSFLIDDS 302

Involved in the lipid remodeling steps of GPI-anchor maturation.

Danio rerio (taxid: 7955)

>sp|Q68EV0|PGAP3_XENLA Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3 PE=2 SV=1

 Score =  129 bits (324), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 10  KVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKT 69
           K G +  ++HGKWPF R    QEP +   S LN      G  S  +L  Y+  +    + 
Sbjct: 77  KEGHEVPQFHGKWPFSRFLFFQEPASALASFLN------GVASLLMLFRYRSSVPSSCQM 130

Query: 70  YYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVR 129
           Y         + ++++N+WFWS +FH+RD  LTEK+D   A +++  +  L  +R F ++
Sbjct: 131 YRTCLA----FSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGLQ 186

Query: 130 DEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR--HP 187
             +      A L+     HI YL   + D+  NM    + G+  L+ W  W    R   P
Sbjct: 187 YPSIANAFGAFLVLLFACHISYLTLGRFDYSYNMAANTSFGIVNLMWWLAWCMWRRFHQP 246

Query: 188 SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
             WK  LVVV      LL++ DFPP    +DAHAL+H + IPL +L++SF+RDDS
Sbjct: 247 YLWKCVLVVVLLQSLALLELLDFPPVMWILDAHALWHFSTIPLHFLFYSFLRDDS 301

Involved in the lipid remodeling steps of GPI-anchor maturation.

Xenopus laevis (taxid: 8355)

>sp|A2A559|PGAP3_MOUSE Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3 PE=2 SV=1

 Score =  128 bits (321), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 121/233 (51%), Gaps = 12/233 (5%)

Query: 12  GDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYY 71
           G +  ++HGKWPF R   IQEP +   S LN      G  S  +L  Y+  +      Y+
Sbjct: 84  GHRVPQFHGKWPFSRFLFIQEPASAVASLLN------GLASLVMLCRYRASVPASSPMYH 137

Query: 72  EYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDE 131
                   +  +++N+WFWS VFH+RD +LTEK+D   A A++  +  L  +R   ++  
Sbjct: 138 TCMA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQHP 193

Query: 132 AARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH--PSR 189
           +      A L+  +T HI YL+    D+G NM   +A+G+  L  W +W    R   P  
Sbjct: 194 SVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRLPHT 253

Query: 190 WKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
            +  +VVV      LL++ DFPP    +DAHA++H + IP+  L++ F+ DDS
Sbjct: 254 RRCMVVVVLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Mus musculus (taxid: 10090)

>sp|Q7K0P4|PGAP3_DROME Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster GN=CG3271 PE=1 SV=2

 Score =  127 bits (319), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 119/224 (53%), Gaps = 12/224 (5%)

Query: 17  KYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGL 76
           +++GKWPF R+ G+QEP +V  S LN  +         +L  ++  +RPD   Y     L
Sbjct: 96  QFYGKWPFLRLLGMQEPASVIFSCLNFVVHLR------LLRKFRREVRPDSPCYM----L 145

Query: 77  WHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVM 136
            HI+ + ++N W WSA+FH+RD  LTE LD + A +++  +  + ++R         R +
Sbjct: 146 THIFAVTSLNGWIWSAIFHTRDFPLTELLDYAFAYSIILCSLYVMVMRMLHRYSLFLRGV 205

Query: 137 VAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGV--TRHPSRWKLWL 194
           +    +++   +  YL+  + ++  NM V +A GV   + W +W     TR P   ++  
Sbjct: 206 ITLAFLSYYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRILR 265

Query: 195 VVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFI 238
             +   LAM L++ DFPP    +DAHAL+H A IPL  L++  +
Sbjct: 266 FYILMALAMSLELLDFPPILWILDAHALWHLATIPLASLYYECV 309

Involved in the lipid remodeling steps of GPI-anchor maturation.

Drosophila melanogaster (taxid: 7227)

>sp|Q9P6N9|PER1_SCHPO Protein PER1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.07 PE=3 SV=1

 Score =  125 bits (314), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 122/241 (50%), Gaps = 23/241 (9%)

Query: 17  KYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLR--PDKKTYYEYT 74
           +YHGKW F RV+GIQE  +V  S LN  I ++G         Y +  R  PD+       
Sbjct: 91  QYHGKWYFIRVFGIQELFSVFFSMLNFMIHYNG---------YHIMRRCIPDEHPAKRLC 141

Query: 75  GLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAAR 134
             W I G   MN+W WS+VFH RD  +TEKLD  SA A + F     ++    +      
Sbjct: 142 LSWAIVG---MNAWVWSSVFHIRDTPITEKLDYFSAGAFVLFGSYCTLILMLRLDQLPGG 198

Query: 135 VM----VAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHP--- 187
            +    +    IA    H+ YL+FY  D+G NMK  +A+G+ Q ++W  ++   R+    
Sbjct: 199 KLLCWIIGVIFIAAFIAHVSYLSFYSFDYGYNMKANVAVGLVQNILWYYYSWSNRNSGLY 258

Query: 188 -SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRT 246
            +RW  + +V    LA  L+++DF P    +DAHAL+H + +P+T+  + F+     +  
Sbjct: 259 WTRWPAY-IVTSLMLATSLELFDFSPIANLIDAHALWHLSTVPITHYLYGFVVRKCSYDL 317

Query: 247 T 247
           T
Sbjct: 318 T 318

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI. Required for efficient transport of GPI-anchor proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q96FM1|PGAP3_HUMAN Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3 PE=2 SV=2

 Score =  121 bits (303), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 12/233 (5%)

Query: 12  GDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYY 71
           G K  ++HGKWPF R    QEP +   S LN      G  S  +L  Y+  +      Y+
Sbjct: 84  GHKVPQFHGKWPFSRFLFFQEPASAVASFLN------GLASLVMLCRYRTFVPASSPMYH 137

Query: 72  EYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDE 131
                   +  +++N+WFWS VFH+RD +LTEK+D   A  ++  +  L  +R   ++  
Sbjct: 138 TCVA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHP 193

Query: 132 AARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPSR 189
           A      A L+  +T H+ YL+  + D+G N+   +A+G+  ++ W  W      R P  
Sbjct: 194 AVVSAFRALLLLMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHV 253

Query: 190 WKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
            K  +VV+      LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct: 254 RKCVVVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Homo sapiens (taxid: 9606)

>sp|A7YWP2|PGAP3_BOVIN Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3 PE=2 SV=1

 Score =  120 bits (301), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 119/234 (50%), Gaps = 15/234 (6%)

Query: 12  GDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYY 71
           G K  ++HGKWPF R    QEP +   S LN      G  S  +L  Y+  +      Y 
Sbjct: 84  GQKVPQFHGKWPFSRFLCFQEPASAVASFLN------GLASLVMLCRYRTSVPASSPMYP 137

Query: 72  EYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDE 131
                   +  +++N+WFWS VFH+RD +LTEK+D   A  ++  +  L  +R   ++  
Sbjct: 138 TCVA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHP 193

Query: 132 AARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGV---AQLLIWAIWAGVTRHPS 188
           A      A L+  +T H+ YL+    D+G NM   +A+G+   A  L W +W    R P 
Sbjct: 194 AMASAFRALLLLLLTAHVSYLSLIHFDYGYNMAANVAIGLLNAAWWLAWCLWN--QRLPH 251

Query: 189 RWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
             K   VV+      LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct: 252 VHKCVAVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 305

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Bos taurus (taxid: 9913)

>sp|A2V7M9|PGAP3_CRIGR Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus GN=PGAP3 PE=2 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 12/233 (5%)

Query: 12  GDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYY 71
           G +  ++HGKWPF R   IQEP +   S LN      G  S  +L  Y+  +      Y+
Sbjct: 84  GHRVPQFHGKWPFSRFLFIQEPASAVASLLN------GLASLVMLCRYRASVPASSPMYH 137

Query: 72  EYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDE 131
                   +  +++N+WFWS VFH+RD +LTEK+D   A A++  +  L  +R   ++  
Sbjct: 138 TCMA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSIYLCCVRTVGLQHP 193

Query: 132 AARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPSR 189
           +      A L+  +  H  YL+  + D+  NM   +A+G+  L  W  W      R P  
Sbjct: 194 SVARAFGATLLLMLLLHTSYLSLVRFDYSYNMMANVAIGLVNLAWWLAWCLRNHRRLPHT 253

Query: 190 WKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
            K   VV+      LL++ DFPP    +DAHA++H + IP+  L++ F+ DDS
Sbjct: 254 RKCVAVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFRFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Cricetulus griseus (taxid: 10029)

>sp|P25625|PER1_YEAST Protein PER1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PER1 PE=1 SV=1

 Score = 73.9 bits (180), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 37/266 (13%)

Query: 4   REGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPL 63
           R  E E++     ++HGKWPF RV G QE  +   S  N    + G++ F  ++  +   
Sbjct: 91  RIDEEEEI----YQFHGKWPFLRVLGTQEFFSTIFSIGNFIPHYKGFVKFSRIIREEGDR 146

Query: 64  RPDKKTYYEYTGLW-HIYGILA-MNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFI 119
           R           +W ++Y  +A M +W  S+VFH RD+ +TEKLD   +    L GF+ I
Sbjct: 147 RRKNS---RSILIWNYLYVTVAGMLAWTASSVFHCRDLIITEKLDYFFAGLTVLTGFHAI 203

Query: 120 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 179
            A + +  +  + A+   A+ + A    HIL L +    +  NM+  +  GV Q ++  +
Sbjct: 204 FARMTSMFLYPKIAQAFTAS-VAAIFALHILRL-YVDWSYTYNMRFNIFFGVLQYILLIM 261

Query: 180 WAGVTRHP-SRWKLW-----------------------LVVVGEGLAMLLQIYDFPPYRG 215
            +    H   + KL                        L+V+   +AM L+++DF  Y  
Sbjct: 262 LSCQNYHALQKQKLMGEFKKTAYSSFKRQIFKLCVIPILLVIVTTMAMSLELFDFFSYEW 321

Query: 216 FVDAHALYHAANIPLTYLWWSFIRDD 241
            +DAHAL+H   I  +++ + F  +D
Sbjct: 322 QIDAHALWHLCTIWPSWVLYDFFLED 347

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI. Required for efficient transport of GPI-anchor proteins.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
224120128	348	predicted protein [Populus trichocarpa]	1.0	0.729	0.830	1e-123
225462155	379	PREDICTED: post-GPI attachment to protei	1.0	0.670	0.814	1e-119
225462157	342	PREDICTED: post-GPI attachment to protei	1.0	0.742	0.814	1e-119
225455483	342	PREDICTED: post-GPI attachment to protei	1.0	0.742	0.826	1e-119
147779235	342	hypothetical protein VITISV_034376 [Viti	1.0	0.742	0.811	1e-119
82400132	342	Per1-like family protein [Solanum tubero	1.0	0.742	0.795	1e-118
356561714	342	PREDICTED: post-GPI attachment to protei	1.0	0.742	0.803	1e-117
82621128	342	Per1-like family protein [Solanum tubero	1.0	0.742	0.795	1e-117
171191049	307	PERLD1 [Solanum commersonii]	1.0	0.827	0.791	1e-117
169668008	342	PERLD1 [Glycine max]	1.0	0.742	0.803	1e-117

>gi|224120128|ref|XP_002318250.1| predicted protein [Populus trichocarpa] gi|118489817|gb|ABK96708.1| unknown [Populus trichocarpa x Populus deltoides] gi|222858923|gb|EEE96470.1| predicted protein [Populus trichocarpa]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/254 (83%), Positives = 235/254 (92%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           ML RE EREK+G KPVKYHGKWPF R YG QEPV+VALSALNL+IQFHGW+SFFIL+YYK
Sbjct: 95  MLVREEEREKLGGKPVKYHGKWPFHRAYGFQEPVSVALSALNLAIQFHGWVSFFILIYYK 154

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           L L P KKTYYEYTGLWHIYGIL+MNSWFWSAVFHSRDVELTEKLDCSSAVALLGF+ IL
Sbjct: 155 LQLTPSKKTYYEYTGLWHIYGILSMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFSLIL 214

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           AILRAFS+RDEAARVMV+AP+IAFVTTHILYLNFY LD+ LNMKVC+AMGVAQLLIWA+W
Sbjct: 215 AILRAFSMRDEAARVMVSAPIIAFVTTHILYLNFYNLDYDLNMKVCVAMGVAQLLIWAVW 274

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AGVT HPSR KLW+ VVG GLA+LL+IYDFPPY+GFVDAHAL+HA  IPLTYLWWSF++D
Sbjct: 275 AGVTNHPSRLKLWVAVVGGGLAILLEIYDFPPYQGFVDAHALWHATTIPLTYLWWSFVKD 334

Query: 241 DSEFRTTALLKKPK 254
           D+EFRT++LLKK +
Sbjct: 335 DAEFRTSSLLKKAR 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462155|ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis vinifera] gi|296082755|emb|CBI21760.3| unnamed protein product [Vitis vinifera]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/254 (81%), Positives = 232/254 (91%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           ML RE ERE +G+ PVKYHGKWPF+RVYGIQEP +VALSALNL++QFHGW+SFFILL YK
Sbjct: 126 MLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSFFILLNYK 185

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LPL+P+KK YYEYT LWHIYG+L+MNSWFWSAVFHSRDV+LTEKLD SSAVALLGF+ IL
Sbjct: 186 LPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLGFSLIL 245

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           AILR+F+VR EAARVMV+APL+AFVTTHILYLNFYK D+G NMKVC+ MGVAQLLIWAIW
Sbjct: 246 AILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLLIWAIW 305

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AGVTRHPSRWKLW VVVG GLAMLL+IYDFPPY GFVDAHAL+HA  IPLTY+WWSFI+D
Sbjct: 306 AGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIKD 365

Query: 241 DSEFRTTALLKKPK 254
           D+EF+T  LLKK K
Sbjct: 366 DAEFQTANLLKKVK 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462157|ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2 [Vitis vinifera]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/254 (81%), Positives = 232/254 (91%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           ML RE ERE +G+ PVKYHGKWPF+RVYGIQEP +VALSALNL++QFHGW+SFFILL YK
Sbjct: 89  MLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSFFILLNYK 148

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LPL+P+KK YYEYT LWHIYG+L+MNSWFWSAVFHSRDV+LTEKLD SSAVALLGF+ IL
Sbjct: 149 LPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLGFSLIL 208

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           AILR+F+VR EAARVMV+APL+AFVTTHILYLNFYK D+G NMKVC+ MGVAQLLIWAIW
Sbjct: 209 AILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLLIWAIW 268

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AGVTRHPSRWKLW VVVG GLAMLL+IYDFPPY GFVDAHAL+HA  IPLTY+WWSFI+D
Sbjct: 269 AGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIKD 328

Query: 241 DSEFRTTALLKKPK 254
           D+EF+T  LLKK K
Sbjct: 329 DAEFQTANLLKKVK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455483|ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins factor 3 [Vitis vinifera] gi|147785290|emb|CAN61923.1| hypothetical protein VITISV_036651 [Vitis vinifera] gi|297741118|emb|CBI31849.3| unnamed protein product [Vitis vinifera]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/254 (82%), Positives = 236/254 (92%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           MLARE ERE++GDKPVKYHGKWPFRRVYGIQEPV+VAL+ LNL++QFHGW+SF ILLYYK
Sbjct: 89  MLAREEEREELGDKPVKYHGKWPFRRVYGIQEPVSVALATLNLAMQFHGWVSFLILLYYK 148

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LPLRPDKKT+YEYTGLWHIYGILAMN+WFW+AVFHSRDV+LTEKLD SS VALLGF  IL
Sbjct: 149 LPLRPDKKTFYEYTGLWHIYGILAMNAWFWNAVFHSRDVDLTEKLDYSSGVALLGFTLIL 208

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           AILRAF+VRDEAARVM+AAPL+AFVTTHILYLNFYKLD+GLNMKVCL MG+AQLL+W +W
Sbjct: 209 AILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYKLDYGLNMKVCLTMGIAQLLLWTVW 268

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AGVT HPSRWKLW+VVVG  LAM L+IYDFPPY GFVDAHA++HA  IP TYLWWSF++D
Sbjct: 269 AGVTHHPSRWKLWVVVVGGALAMFLEIYDFPPYWGFVDAHAVWHALAIPFTYLWWSFVKD 328

Query: 241 DSEFRTTALLKKPK 254
           DSEFRT+AL+KK K
Sbjct: 329 DSEFRTSALMKKVK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779235|emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/254 (81%), Positives = 231/254 (90%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           ML RE ERE +G+ PVKYHGKWPF+RVYGIQEP +VALSALNL++QFHGW+SFFILL YK
Sbjct: 89  MLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSFFILLNYK 148

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LPL+P+KK YYEYT LWHIYG+L+MNSWFWSAVFHSRDV+LTEKLD SSAVALLGF+ IL
Sbjct: 149 LPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLGFSLIL 208

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           AILR+F+VR EAARVMV+APL+AFVTTHILYLNFYK D+G NMKVC+ MGVAQLLIW IW
Sbjct: 209 AILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLLIWTIW 268

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AGVTRHPSRWKLW VVVG GLAMLL+IYDFPPY GFVDAHAL+HA  IPLTY+WWSFI+D
Sbjct: 269 AGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIKD 328

Query: 241 DSEFRTTALLKKPK 254
           D+EF+T  LLKK K
Sbjct: 329 DAEFQTANLLKKVK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|82400132|gb|ABB72805.1| Per1-like family protein [Solanum tuberosum]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/254 (79%), Positives = 229/254 (90%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           MLARE ER+KVG KPVKYHGKWPF+RV GIQEPV+VALSALNL++QFHGW+SFFI + YK
Sbjct: 89  MLAREKERKKVGLKPVKYHGKWPFQRVNGIQEPVSVALSALNLAMQFHGWVSFFIFVNYK 148

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LP RP++K +YEYTGLWHIY I AMNSWFWS VFHSRDV LTEKLD SSAVALLGF+ IL
Sbjct: 149 LPFRPNRKPFYEYTGLWHIYAIFAMNSWFWSVVFHSRDVNLTEKLDYSSAVALLGFSLIL 208

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           A+LR F+V DEAARVMV+APL+AFVTTHILYLN Y+LD+GLNMKVCL MG+ QL++WA+W
Sbjct: 209 AVLRVFNVTDEAARVMVSAPLVAFVTTHILYLNCYQLDYGLNMKVCLGMGILQLILWAVW 268

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AGVTRHPSRWKLW+VV+G  LA LL+IYDFPPYRGFVDAHAL+HA  IPLTYLWWSF+RD
Sbjct: 269 AGVTRHPSRWKLWVVVIGGALAALLEIYDFPPYRGFVDAHALWHATTIPLTYLWWSFVRD 328

Query: 241 DSEFRTTALLKKPK 254
           DSEFRTT L+KK K
Sbjct: 329 DSEFRTTTLIKKAK 342

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561714|ref|XP_003549124.1| PREDICTED: post-GPI attachment to proteins factor 3-like [Glycine max]

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/254 (80%), Positives = 228/254 (89%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           ML+RE ER K+GDKPVKYHGKWPF RVYGIQEPVAVALSA+NL+IQFHGW+SFFIL+YYK
Sbjct: 89  MLSREEERTKLGDKPVKYHGKWPFHRVYGIQEPVAVALSAVNLAIQFHGWVSFFILVYYK 148

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LPLRPDKKTYYEYTGLWHIYGIL+MN+W WSAVFHSR VELTEKLD SSAVALLGF  IL
Sbjct: 149 LPLRPDKKTYYEYTGLWHIYGILSMNAWLWSAVFHSRAVELTEKLDFSSAVALLGFTLIL 208

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           AILRAF+VRDEA RVM++APL+AFVTTHI+YLNFY+L +GLN  VC  M V QLLIWAIW
Sbjct: 209 AILRAFNVRDEATRVMISAPLLAFVTTHIMYLNFYELAYGLNRIVCTGMVVVQLLIWAIW 268

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AG + HP+RWKLW VVVG GLAM+L+ YDFPPY G+VDAHAL+HA +IPLT+ WW FIRD
Sbjct: 269 AGASNHPARWKLWAVVVGGGLAMVLETYDFPPYMGYVDAHALWHATSIPLTFFWWGFIRD 328

Query: 241 DSEFRTTALLKKPK 254
           D+EFRTTALLKK K
Sbjct: 329 DAEFRTTALLKKVK 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|82621128|gb|ABB86252.1| Per1-like family protein [Solanum tuberosum]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/254 (79%), Positives = 228/254 (89%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           MLARE ER+KVG KPVKYHGKWPF+RV GIQEPV+VALSALNL++QFHGW+SFFI + YK
Sbjct: 89  MLAREKERKKVGLKPVKYHGKWPFQRVNGIQEPVSVALSALNLAMQFHGWVSFFIFVNYK 148

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LP RP++K +YEYTGLWHIY I AMNSWFWS VFHSRDV LTEKLD SSAVALLGF  IL
Sbjct: 149 LPFRPNRKPFYEYTGLWHIYAIFAMNSWFWSVVFHSRDVYLTEKLDYSSAVALLGFPLIL 208

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           A+LR F+V DEAARVMV+APL+AFVTTHILYLN Y+LD+GLNMKVCL MG+ QL++WA+W
Sbjct: 209 AVLRVFNVTDEAARVMVSAPLVAFVTTHILYLNCYQLDYGLNMKVCLGMGILQLILWAVW 268

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AGVTRHPSRWKLW+VV+G  LA LL+IYDFPPYRGFVDAHAL+HA  IPLTYLWWSF+RD
Sbjct: 269 AGVTRHPSRWKLWVVVIGGALAALLEIYDFPPYRGFVDAHALWHATTIPLTYLWWSFVRD 328

Query: 241 DSEFRTTALLKKPK 254
           DSEFRTT L+KK K
Sbjct: 329 DSEFRTTTLIKKAK 342

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|171191049|gb|ACB45085.1| PERLD1 [Solanum commersonii]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/254 (79%), Positives = 229/254 (90%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           MLARE ER+KVG KPVKYHGKWPF+RV GIQEPV+VALSALNL++QFHGW+SFFI + YK
Sbjct: 54  MLAREKERKKVGLKPVKYHGKWPFQRVNGIQEPVSVALSALNLAMQFHGWVSFFIFVNYK 113

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LP  P++K +YEYTGLWHIY I AMNSWFWS VFHSRDV+LTEKLD SSAVALLGF+ IL
Sbjct: 114 LPFMPNRKPFYEYTGLWHIYAIFAMNSWFWSVVFHSRDVDLTEKLDYSSAVALLGFSLIL 173

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           A+LR FSV DEAARVMV+APL+AFVTTHILYLN Y+LD+GLNMKVCL MG+ QL++WA+W
Sbjct: 174 AVLRVFSVTDEAARVMVSAPLVAFVTTHILYLNCYQLDYGLNMKVCLGMGILQLILWAVW 233

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AGVTRHPSRWKLW+VV+G  LA LL+IYDFPPYRGFVDAHAL+HA  IPLTYLWW+F+RD
Sbjct: 234 AGVTRHPSRWKLWVVVIGGALAALLEIYDFPPYRGFVDAHALWHATTIPLTYLWWNFVRD 293

Query: 241 DSEFRTTALLKKPK 254
           DSEFRTT L+KK K
Sbjct: 294 DSEFRTTTLIKKAK 307

Source: Solanum commersonii

Species: Solanum commersonii

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|169668008|gb|ACA64424.1| PERLD1 [Glycine max]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/254 (80%), Positives = 229/254 (90%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
           MLARE ER K+GDKPVKYHGKWPFRRVYGIQEPVAVALSA+NL++QFHGW+SFFIL+YYK
Sbjct: 89  MLAREEERTKLGDKPVKYHGKWPFRRVYGIQEPVAVALSAVNLAMQFHGWVSFFILVYYK 148

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           L LRPDKKTYYEYTGLWHIYGIL+MN+W WSAVFHSR VELTEKLD SSAVALLGF+ IL
Sbjct: 149 LTLRPDKKTYYEYTGLWHIYGILSMNAWLWSAVFHSRAVELTEKLDFSSAVALLGFSLIL 208

Query: 121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
           AILRAF+VRDEA RVM++APLIAFVTTHI+YLNFY+L +GLN  VC  M V QLLIWAIW
Sbjct: 209 AILRAFNVRDEATRVMISAPLIAFVTTHIMYLNFYELAYGLNRIVCTGMVVVQLLIWAIW 268

Query: 181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
           AG + HP+RWKLW VVVG GLAM+L+ YDFPPY G+VDAHAL+HA +IPLT+ WW FIRD
Sbjct: 269 AGASNHPARWKLWAVVVGGGLAMVLETYDFPPYMGYVDAHALWHATSIPLTFFWWGFIRD 328

Query: 241 DSEFRTTALLKKPK 254
           D+EFRTTA+LKK K
Sbjct: 329 DAEFRTTAMLKKVK 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
TAIR|locus:2017968	342	AT1G16560 "AT1G16560" [Arabido	1.0	0.742	0.724	1.9e-106
ZFIN|ZDB-GENE-080204-27	316	zgc:171485 "zgc:171485" [Danio	0.838	0.674	0.376	1e-36
UNIPROTKB|Q68EV0	317	pgap3 "Post-GPI attachment to	0.866	0.694	0.378	3.6e-34
UNIPROTKB|Q0VFE3	316	pgap3 "Post-GPI attachment to	0.866	0.696	0.369	4.6e-34
UNIPROTKB|H9L1M1	229	PERLD1 "Uncharacterized protei	0.822	0.912	0.387	6.7e-33
MGI|MGI:2444461	320	Pgap3 "post-GPI attachment to	0.858	0.681	0.360	1.4e-32
UNIPROTKB|Q96FM1	320	PGAP3 "Post-GPI attachment to	0.854	0.678	0.345	2e-31
UNIPROTKB|A7YWP2	319	PGAP3 "Post-GPI attachment to	0.854	0.680	0.351	3.3e-31
UNIPROTKB|F1RWL4	320	PGAP3 "Uncharacterized protein	0.862	0.684	0.353	4.2e-31
POMBASE|SPAC823.07	331	SPAC823.07 "GPI-phospholipase	0.834	0.640	0.344	6.9e-31

TAIR|locus:2017968 AT1G16560 "AT1G16560" [Arabidopsis thaliana (taxid:3702)]

 Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
 Identities = 184/254 (72%), Positives = 221/254 (87%)

Query:     1 MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
             M+ RE ERE +G  PVKYHGKWPF+RV GIQEP +VA S LNL++ FHGW+SFFI++YYK
Sbjct:    85 MVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGWLSFFIMIYYK 144

Query:    61 LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
             LPL+ D+  YYEY GLWHIYG+L+MNSWFWSAVFHSRDV+LTE+LD SSAVA+LGF+ IL
Sbjct:   145 LPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRDVDLTERLDYSSAVAILGFSLIL 204

Query:   121 AILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIW 180
             AILR F +R EAARVMV+AP++AFVTTHILY+NFYKLD+G NM VC+AMGV+QL +WA W
Sbjct:   205 AILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLDYGWNMIVCVAMGVSQLFLWARW 264

Query:   181 AGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRD 240
             A V+ HPS WKLW+VV+  GLAMLL+IYDFPPY G+ DAH+++HAA IPLT LWWSFIRD
Sbjct:   265 AAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFDAHSIWHAATIPLTILWWSFIRD 324

Query:   241 DSEFRTTALLKKPK 254
             D+EFRT++LLKK K
Sbjct:   325 DAEFRTSSLLKKTK 338

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

ZFIN|ZDB-GENE-080204-27 zgc:171485 "zgc:171485" [Danio rerio (taxid:7955)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 87/231 (37%), Positives = 129/231 (55%)

Query:    17 KYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGL 76
             ++HGKWPF R    +EP +   S LN      G     +LL Y+  +      Y+  T  
Sbjct:    85 QFHGKWPFARFLCFEEPASALASLLN------GLACLLMLLRYRSAVPRQSPMYHTITA- 137

Query:    77 WHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSVRDEAAR 134
                + ++++N+WFWS VFH+RD  LTEK+D  C+SAV L  ++  L  +R   +R  A  
Sbjct:   138 ---FSLVSLNAWFWSTVFHTRDTYLTEKMDYFCASAVIL--YSIYLCCVRTLGLRRPAIS 192

Query:   135 VMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH--PSRWKL 192
              MV   LI   T+H+ YL F   D+G NM    ++G+  LL W  W  + R   P  WK 
Sbjct:   193 SMVGVLLILAFTSHVSYLTFVSFDYGYNMAANASIGIINLLWWLCWCWLNRRILPYWWKC 252

Query:   193 WLVVVG-EGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
              +VV+   GLA LL++ DFPP    +DAHA++H + +P+ +L++SF+ DDS
Sbjct:   253 GMVVLLLHGLA-LLELLDFPPLFWVLDAHAVWHLSTVPVHFLFYSFLIDDS 302

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|Q68EV0 pgap3 "Post-GPI attachment to proteins factor 3" [Xenopus laevis (taxid:8355)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 90/238 (37%), Positives = 129/238 (54%)

Query:    10 KVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKT 69
             K G +  ++HGKWPF R    QEP +   S LN      G  S  +L  Y+  + P    
Sbjct:    77 KEGHEVPQFHGKWPFSRFLFFQEPASALASFLN------GVASLLMLFRYRSSV-PSSCQ 129

Query:    70 YYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFS 127
              Y  T L   + ++++N+WFWS +FH+RD  LTEK+D  C+S+V L   +  L  +R F 
Sbjct:   130 MYR-TCL--AFSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVIL--HSIYLCCMRTFG 184

Query:   128 VRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR-H 186
             ++  +      A L+     HI YL   + D+  NM    + G+  L+ W  W    R H
Sbjct:   185 LQYPSIANAFGAFLVLLFACHISYLTLGRFDYSYNMAANTSFGIVNLMWWLAWCMWRRFH 244

Query:   187 -PSRWKLWLVVVG-EGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
              P  WK  LVVV  + LA LL++ DFPP    +DAHAL+H + IPL +L++SF+RDDS
Sbjct:   245 QPYLWKCVLVVVLLQSLA-LLELLDFPPVMWILDAHALWHFSTIPLHFLFYSFLRDDS 301

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

UNIPROTKB|Q0VFE3 pgap3 "Post-GPI attachment to proteins factor 3" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 88/238 (36%), Positives = 129/238 (54%)

Query:    10 KVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKT 69
             K G +  ++HGKWPF R    QEP +   S LN      G  S  +LL Y+  + P    
Sbjct:    77 KEGHEVPQFHGKWPFSRFLFFQEPASALASFLN------GVASLLMLLRYRSSV-PSSCQ 129

Query:    70 YYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFS 127
              Y  T L   + ++++N+WFWS +FH+RD  LTEK+D  C+S+V L   +  L  +R F 
Sbjct:   130 MYR-TCL--AFSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVIL--HSIYLCCMRTFG 184

Query:   128 VRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR-H 186
             ++  +      A L+     H+ YL   + D+  NM      GV  L+ W  W    R H
Sbjct:   185 LQYPSIANGFGAFLVLLFACHVSYLTLGRFDYSYNMAANTGFGVLNLMWWLAWCFRRRFH 244

Query:   187 -PSRWKLWLVVVG-EGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
              P  WK  LVV+  + LA LL++ DFPP    +DAHAL+H + +PL +L++SF++DDS
Sbjct:   245 QPYLWKCVLVVISLQSLA-LLELLDFPPVMWILDAHALWHFSTVPLHFLFYSFLKDDS 301

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

UNIPROTKB|H9L1M1 PERLD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 88/227 (38%), Positives = 120/227 (52%)

Query:    21 KWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGL-WHI 79
             +WPF R   +QEP +   S LN      G  SF +LL YK  + P    Y       W  
Sbjct:     2 QWPFSRFLFVQEPASAFASLLN------GLASFVMLLRYKAAVPPTSPMYPTCVAFAW-- 53

Query:    80 YGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSVRDEAARVMV 137
                +++N+WFWS VFH+RD  LTEKLD  C+SAV L   +  L  +R   +R  A   + 
Sbjct:    54 ---VSVNAWFWSTVFHTRDTALTEKLDYFCASAVVL--HSVYLCWVRTMGLRRPALIGVF 108

Query:   138 AAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPSRWKLWLV 195
              A L+ F+  HI YL   + D+G NM   +A+G   LL W  W      R P  WK  +V
Sbjct:   109 RAFLLLFLACHISYLTLVRFDYGYNMAANVAIGFFYLLWWLWWCLRNRPRLPHVWKCAVV 168

Query:   196 VVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
             V+      LL++ DFPP    +DAHAL+H + +PL  L++SF+ DDS
Sbjct:   169 VLLLQAGALLELLDFPPLFWVLDAHALWHISTVPLNILFYSFLVDDS 215

GO:0006505 "GPI anchor metabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

MGI|MGI:2444461 Pgap3 "post-GPI attachment to proteins 3" [Mus musculus (taxid:10090)]

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 85/236 (36%), Positives = 132/236 (55%)

Query:    12 GDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYY 71
             G +  ++HGKWPF R   IQEP +   S LN      G  S  +L  Y+  + P     Y
Sbjct:    84 GHRVPQFHGKWPFSRFLFIQEPASAVASLLN------GLASLVMLCRYRASV-PASSPMY 136

Query:    72 EYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSVR 129
              +T +   +  +++N+WFWS VFH+RD +LTEK+D  C+SAV L   +  L  +R   ++
Sbjct:   137 -HTCM--AFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVIL--HSVYLCCVRTVGLQ 191

Query:   130 DEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH--P 187
               +      A L+  +T HI YL+    D+G NM   +A+G+  L  W +W    R   P
Sbjct:   192 HPSVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRLP 251

Query:   188 -SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
              +R  + +VV+ +GL+ LL++ DFPP    +DAHA++H + IP+  L++ F+ DDS
Sbjct:   252 HTRRCMVVVVLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=ISO

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISO

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISO

UNIPROTKB|Q96FM1 PGAP3 "Post-GPI attachment to proteins factor 3" [Homo sapiens (taxid:9606)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 82/237 (34%), Positives = 127/237 (53%)

Query:    12 GDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYY 71
             G K  ++HGKWPF R    QEP +   S LN      G  S  +L  Y+  +      Y+
Sbjct:    84 GHKVPQFHGKWPFSRFLFFQEPASAVASFLN------GLASLVMLCRYRTFVPASSPMYH 137

Query:    72 EYTGL-WHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSV 128
                   W     +++N+WFWS VFH+RD +LTEK+D  C+S V L   +  L  +R   +
Sbjct:   138 TCVAFAW-----VSLNAWFWSTVFHTRDTDLTEKMDYFCASTVIL--HSIYLCCVRTVGL 190

Query:   129 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRH 186
             +  A      A L+  +T H+ YL+  + D+G N+   +A+G+  ++ W  W      R 
Sbjct:   191 QHPAVVSAFRALLLLMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRL 250

Query:   187 PSRWKLWLVVVG-EGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
             P   K  +VV+  +GL+ LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct:   251 PHVRKCVVVVLLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 306

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=IMP

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IDA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IMP

UNIPROTKB|A7YWP2 PGAP3 "Post-GPI attachment to proteins factor 3" [Bos taurus (taxid:9913)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 83/236 (35%), Positives = 129/236 (54%)

Query:    12 GDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYY 71
             G K  ++HGKWPF R    QEP +   S LN      G  S  +L  Y+  + P     Y
Sbjct:    84 GQKVPQFHGKWPFSRFLCFQEPASAVASFLN------GLASLVMLCRYRTSV-PASSPMY 136

Query:    72 EYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSVR 129
               T +   +  +++N+WFWS VFH+RD +LTEK+D  C+S V L   +  L  +R   ++
Sbjct:   137 P-TCV--AFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVIL--HSIYLCCVRTVGLQ 191

Query:   130 DEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGV---AQLLIWAIWAGVTRH 186
               A      A L+  +T H+ YL+    D+G NM   +A+G+   A  L W +W     H
Sbjct:   192 HPAMASAFRALLLLLLTAHVSYLSLIHFDYGYNMAANVAIGLLNAAWWLAWCLWNQRLPH 251

Query:   187 PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
               +  + +V++ +GL+ LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct:   252 VHKC-VAVVLLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 305

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

UNIPROTKB|F1RWL4 PGAP3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 83/235 (35%), Positives = 122/235 (51%)

Query:    12 GDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYY 71
             G K  ++HGKWPF R    QEP +   S LN      G  S  +L  Y+  + P     Y
Sbjct:    84 GHKVPQFHGKWPFSRFLCFQEPASAVASFLN------GLASLVMLCRYRASV-PASSPMY 136

Query:    72 EYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSVR 129
               T +   +  +++N+WFWS VFH+RD +LTEKLD  C+S V L   +  L  +R   ++
Sbjct:   137 P-TCV--AFAWVSLNAWFWSTVFHTRDTDLTEKLDYFCASTVIL--HSVYLCCVRTVGLQ 191

Query:   130 DEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH--P 187
               A      A L+  +T H+ YL+    D+G N+   +AMG+     W  W    R   P
Sbjct:   192 RPAVASAFRALLLLMLTAHVSYLSLVHFDYGYNLAANVAMGLVNAAWWLAWCLRNRRRLP 251

Query:   188 SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 242
                K  +VV+      LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct:   252 HVRKCMVVVLLLQALSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 306

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=IEA

POMBASE|SPAC823.07 SPAC823.07 "GPI-phospholipase A2 activity regulator (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 79/229 (34%), Positives = 121/229 (52%)

Query:    17 KYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGL 76
             +YHGKW F RV+GIQE  +V  S LN  I ++G+       +      PD+         
Sbjct:    91 QYHGKWYFIRVFGIQELFSVFFSMLNFMIHYNGY-------HIMRRCIPDEHPAKRLCLS 143

Query:    77 WHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGF-NFILAILRAFSVRDEAARV 135
             W I G   MN+W WS+VFH RD  +TEKLD  SA A + F ++   IL     +    ++
Sbjct:   144 WAIVG---MNAWVWSSVFHIRDTPITEKLDYFSAGAFVLFGSYCTLILMLRLDQLPGGKL 200

Query:   136 M---VAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSR-WK 191
             +   +    IA    H+ YL+FY  D+G NMK  +A+G+ Q ++W  ++   R+    W 
Sbjct:   201 LCWIIGVIFIAAFIAHVSYLSFYSFDYGYNMKANVAVGLVQNILWYYYSWSNRNSGLYWT 260

Query:   192 LW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFI 238
              W   +V    LA  L+++DF P    +DAHAL+H + +P+T+  + F+
Sbjct:   261 RWPAYIVTSLMLATSLELFDFSPIANLIDAHALWHLSTVPITHYLYGFV 309

GO:0000329 "fungal-type vacuole membrane" evidence=ISO;IDA

GO:0003674 "molecular_function" evidence=ND

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030026 "cellular manganese ion homeostasis" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00121171 hypothetical protein (348 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	254
pfam04080	264	pfam04080, Per1, Per1-like	1e-105
COG5237	319	COG5237, PER1, Predicted membrane protein [Functio	6e-37

>gnl|CDD|217878 pfam04080, Per1, Per1-like

 Score =  304 bits (781), Expect = e-105
 Identities = 112/248 (45%), Positives = 155/248 (62%), Gaps = 11/248 (4%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK 60
                 EREK G+  V++HGKWPF+RV GIQEP +V  S LNL + + G   F  L+ Y 
Sbjct: 23  QQIITDEREKRGEPIVQFHGKWPFKRVLGIQEPFSVIFSLLNLLVHYKGLRRFRRLVPYN 82

Query: 61  LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFIL 120
           LPLRP +K      G + IY I+ MN+W WSA+FH+RD  LTEKLD  SA A + +   L
Sbjct: 83  LPLRPTRK------GNYIIYAIVGMNAWIWSAIFHTRDFPLTEKLDYFSAGATVLYGLYL 136

Query: 121 AILRAFSV-RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 179
           A++R F + R    R +  A  +A  TTH+LYL+FY  D+G NMK  + +G+ Q ++W +
Sbjct: 137 AVVRTFRLDRRPLVRRLFTAVCLALYTTHVLYLSFYDWDYGYNMKANIVVGLLQNILWIL 196

Query: 180 WAGVTRHPSR--WKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWW 235
           W+ +        WKLW  L+V+   LAM L+++DFPP    +DAH+L+H A IP TYLW+
Sbjct: 197 WSFLRYRKYPKLWKLWPILLVIWLILAMSLELFDFPPIFWLIDAHSLWHLATIPPTYLWY 256

Query: 236 SFIRDDSE 243
            F+ DD+E
Sbjct: 257 DFLIDDAE 264

PER1 is required for GPI-phospholipase A2 activity and is involved in lipid remodelling of GPI-anchored proteins. Length = 264

>gnl|CDD|227562 COG5237, PER1, Predicted membrane protein [Function unknown]

 Score =  132 bits (333), Expect = 6e-37
 Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 19/237 (8%)

Query: 14  KPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEY 73
           K  + HGKW F+RV G+QE  +   S +N    + G   F  +L   L      + YY  
Sbjct: 83  KIYQRHGKWGFQRVLGMQEFFSALFSFMNFITHYIG---FHRMLRKILRETRLGRLYY-- 137

Query: 74  TGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSV----R 129
                 +  + M +W  S+VFH RD  +TEKLD   A   + F F +A++R   +     
Sbjct: 138 ----LQWVYIGMLAWISSSVFHIRDNTITEKLDYFLAGLTVLFGFYMALVRMILIVSPPI 193

Query: 130 DEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHP-- 187
           ++A R  + A  IAF   HI  L+  + D+  NM    A+GV Q ++  + + +      
Sbjct: 194 EKATRGPLQAIFIAFFAYHIHRLSNIEFDYVYNMISNCAIGVTQTILSHLVSFLNYRKLG 253

Query: 188 ---SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDD 241
               R  L+ V     LA  L+++DFPPY   +DAHAL+H      T   + F   D
Sbjct: 254 HTFKRIPLFFVFF-FFLAGSLELFDFPPYAYLIDAHALWHLITCISTPFLYLFWSGD 309

Length = 319

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	254
PF04080	267	Per1: Per1-like ; InterPro: IPR007217 A member of	100.0
KOG2970	319	consensus Predicted membrane protein [Function unk	100.0
COG5237	319	PER1 Predicted membrane protein [Function unknown]	100.0
PF03006	222	HlyIII: Haemolysin-III related; InterPro: IPR00425	97.66
PF05875	262	Ceramidase: Ceramidase; InterPro: IPR008901 This e	97.51
PF12036	186	DUF3522: Protein of unknown function (DUF3522); In	97.02
TIGR01065	204	hlyIII channel protein, hemolysin III family. This	96.51
PRK15087	219	hemolysin; Provisional	96.04
KOG0748	286	consensus Predicted membrane proteins, contain hem	86.4

>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum []

Probab=100.00  E-value=2.6e-98  Score=681.18  Aligned_cols=233  Identities=45%  Similarity=0.797  Sum_probs=213.0

Q ss_pred             CchhhHHHHHcCCCCcccccccccccccccccHHHHHHHHhhHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHHH
Q 025372            1 MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIY   80 (254)
Q Consensus         1 ~~~~~~~R~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~   80 (254)
                      |...|++|+++|+|++||||||||+|++|||||+||+||++|+++|++|+++++    ++.|.+.+.+++      |+++
T Consensus        23 m~~~t~~r~~~g~~i~QfhGKWPF~Rv~GiQEp~Sv~FSllNl~~h~~~~~~~~----~~~~~~~p~~~~------~~~~   92 (267)
T PF04080_consen   23 MWIITEERIKNGEPIVQFHGKWPFKRVLGIQEPASVLFSLLNLLAHYRGLRKFR----RQVPRNSPMYPY------YIIY   92 (267)
T ss_pred             cHHHHHHHHHcCCCcccccccccchhhhcCchHHHHHHHHHhHHHHHHHHHHHH----HhccCCCCCcCe------eehH
Confidence            668899999999999999999999999999999999999999999999998854    344444333333      5679


Q ss_pred             HHHHHHHHHHHHHhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHhhhcccccccc
Q 025372           81 GILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVR-DEAARVMVAAPLIAFVTTHILYLNFYKLDH  159 (254)
Q Consensus        81 ~~v~~~aW~wStiFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~-~~~~r~~~~~~~~~~~~~Hv~yL~~~~fdY  159 (254)
                      +++|||||+||||||+||+++|||||||||+++|++|++++++|+++++ ++..+.+++++|+++|++||+||++.||||
T Consensus        93 ~~v~~naW~wStvFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~~~~~~~~~~~~~~~~Hv~yL~~~~fdY  172 (267)
T PF04080_consen   93 AIVSMNAWIWSTVFHTRDTPLTEKLDYFSAGATVLFGLYAAIVRIFRLYRRRRLRRIFTALCIAFYIAHVSYLSFVRFDY  172 (267)
T ss_pred             HHHHHHHHHHHHHHHHhcccHhhHhHHhhhHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHcccccccc
Confidence            9999999999999999999999999999999999999999999999995 455678899999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHhhhcCCcc---------hhHH--HHHHHHHHHHHHHhhcCCCCcccchhhhhhhcCcc
Q 025372          160 GLNMKVCLAMGVAQLLIWAIWAGVTRHPSR---------WKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANI  228 (254)
Q Consensus       160 ~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~---------~~~~--~~v~~~~~am~LEl~DFpP~~~~iDAHALWHl~Ti  228 (254)
                      ||||++||++|++|+++|+.||+.++++.+         ++++  ++++++.+||+|||+||||+++++|||||||++||
T Consensus       173 ~YNM~~nv~~G~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~lam~LEl~DFpP~~~~lDAHALWHl~Ti  252 (267)
T PF04080_consen  173 GYNMKANVAVGLLQNILWLLWSFRNYRRYPSVKKSYSKRWKLWPILFVVLTILAMSLELFDFPPIFWLLDAHALWHLATI  252 (267)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHhhccCcccccchHHHHHHHHHh
Confidence            999999999999999999999998765433         7777  67889999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhhHH
Q 025372          229 PLTYLWWSFIRDDSE  243 (254)
Q Consensus       229 p~~~~wy~Fl~~D~~  243 (254)
                      ||+++||+|+++|+|
T Consensus       253 p~~~~wy~Fl~~D~~  267 (267)
T PF04080_consen  253 PPTYLWYDFLIDDAE  267 (267)
T ss_pred             hHHHHHHHHHHHhcC
Confidence            999999999999986

>KOG2970 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.9e-94  Score=656.97  Aligned_cols=243  Identities=48%  Similarity=0.888  Sum_probs=228.0

Q ss_pred             CchhhHHHHHcCCCCcccccccccccccccccHHHHHHHHhhHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHHH
Q 025372            1 MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIY   80 (254)
Q Consensus         1 ~~~~~~~R~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~   80 (254)
                      |.++|.+|+++|+|++||||||||+||+||||||||+||++|+++|++|+.+      +|.+.+++++.+|+  ++|++|
T Consensus        73 m~~t~~~~~~~~~pi~qfhGKWpFlrvlGiQEp~SviFS~lNl~~h~~g~~~------~r~~~~~~~~~r~~--~l~~I~  144 (319)
T KOG2970|consen   73 MWTTESEFIKRGGPIPQFHGKWPFLRVLGIQEPFSVIFSFLNLITHYKGLVK------FRRPKKPNRPTRYE--RLWLIY  144 (319)
T ss_pred             eeeehhhHHhcCCccccccCCcchhhhhhccchHHHHHHHHHHHHHHHHHhh------eecccCCCCcchhc--cchhhH
Confidence            7889999999999999999999999999999999999999999999999644      67777888888888  799999


Q ss_pred             HHHHHHHHHHHHHhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCChh-HHHHHHHHHHHHHHHHHhhhcccccccc
Q 025372           81 GILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDE-AARVMVAAPLIAFVTTHILYLNFYKLDH  159 (254)
Q Consensus        81 ~~v~~~aW~wStiFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~-~~r~~~~~~~~~~~~~Hv~yL~~~~fdY  159 (254)
                      +++|||||+||+|||+||+++|||||||+|+++|+||+|++++|.++++.. ..|.+++++++++|++|+.||++++|||
T Consensus       145 a~i~mnawiwSsvFH~rD~~lTEklDYf~A~~~vlf~ly~a~ir~~~i~~~~~~~~~ita~fla~ya~Hi~yls~~~fdY  224 (319)
T KOG2970|consen  145 AYIGMNAWIWSSVFHIRDVPLTEKLDYFSAYLTVLFGLYVALIRMLSIQSLPALRGMITAIFLAFYANHILYLSFYNFDY  224 (319)
T ss_pred             HHHHHHHHHHHHhhhhcCCchHhhhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhheeccc
Confidence            999999999999999999999999999999999999999999999999876 7789999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHh-hhcCCcchhHHHH--HHHHHHHHHHHhhcCCCCcccchhhhhhhcCcchhHHHHHH
Q 025372          160 GLNMKVCLAMGVAQLLIWAIWAG-VTRHPSRWKLWLV--VVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWS  236 (254)
Q Consensus       160 ~YNM~~nv~~G~~~~~lW~~~~~-~~~~~~~~~~~~~--v~~~~~am~LEl~DFpP~~~~iDAHALWHl~Tip~~~~wy~  236 (254)
                      ||||++|+++|++|+++|..|++ .+++|+.|+++++  +.+..+||+||++||||+.|++|||||||++|||++++||+
T Consensus       225 gyNm~~~v~~g~iq~vlw~~~~~~~~~~~s~~~i~~~~i~~~~~LA~sLEi~DFpPy~~~iDAHALWHlaTIplt~~~~~  304 (319)
T KOG2970|consen  225 GYNMIVCVAIGVIQLVLWLVWSFKKRNLPSFWRIWPILIVIFFFLAMSLEIFDFPPYAWLIDAHALWHLATIPLTILWYD  304 (319)
T ss_pred             ccceeeehhhHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHhhcCCchhhhcchHHHHHhhcCccHHHHHH
Confidence            99999999999999999999995 4678999997754  44559999999999999999999999999999999999999


Q ss_pred             HHHhhHHHHHHhhhc
Q 025372          237 FIRDDSEFRTTALLK  251 (254)
Q Consensus       237 Fl~~D~~~~~~~~~~  251 (254)
                      |+.+|++++|+..+|
T Consensus       305 Fv~~d~~~~t~~~l~  319 (319)
T KOG2970|consen  305 FVSDDYDFATGVRLK  319 (319)
T ss_pred             HhhchhhhhcceecC
Confidence            999999999987664

>COG5237 PER1 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=8.4e-76  Score=525.19  Aligned_cols=233  Identities=30%  Similarity=0.396  Sum_probs=204.2

Q ss_pred             hHHHHHcCCCCcccccccccccccccccHHHHHHHHhhHHHHHhhhHHHHHHHHhhCCCC-CCCccchhhhhHHHHHHHH
Q 025372            5 EGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLR-PDKKTYYEYTGLWHIYGIL   83 (254)
Q Consensus         5 ~~~R~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~~v   83 (254)
                      |+-|.++++|+.||||||||.||+||||++|++||++|+++||.|+.++    +++.+.. +.++.+|.      .++++
T Consensus        74 ~~~~~~~n~~~~q~hGkW~F~rVlG~qEfFS~~FS~~Nfi~hy~gfh~m----~r~i~~e~~~~R~~~l------~wv~i  143 (319)
T COG5237          74 LKFTNSGNIKIYQRHGKWGFQRVLGMQEFFSALFSFMNFITHYIGFHRM----LRKILRETRLGRLYYL------QWVYI  143 (319)
T ss_pred             HHHhccCCchhhhhcCccceeeehhHHHHHHHHHHHHHHHHHHHHHHHH----HHHhcccccccceEEe------eHHHH
Confidence            5678889999999999999999999999999999999999999999774    2344433 33444543      35799


Q ss_pred             HHHHHHHHHHhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCCh----hHHHHHHHHHHHHHHHHHhhhcccccccc
Q 025372           84 AMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD----EAARVMVAAPLIAFVTTHILYLNFYKLDH  159 (254)
Q Consensus        84 ~~~aW~wStiFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~----~~~r~~~~~~~~~~~~~Hv~yL~~~~fdY  159 (254)
                      ||+||+||+|||+||+++|||+|||+|++.|++|+|++.+|..++..    +..|...+++++++|+.||.||++++|||
T Consensus       144 gmlAwi~SsvFHird~~iTeklDYF~AgltVLfGfy~~lvrm~~~~~~p~~K~~~~~~~aifia~fa~Hi~rls~i~fdY  223 (319)
T COG5237         144 GMLAWISSSVFHIRDNTITEKLDYFLAGLTVLFGFYMALVRMILIVSPPIEKATRGPLQAIFIAFFAYHIHRLSNIEFDY  223 (319)
T ss_pred             HHHHHHHHhheeeeccchhhhHHHHHhhHHHHHHHHHHHHHHHHhhcCchHHHHHhHHHHHHHHHHHHHHHHHhhcccee
Confidence            99999999999999999999999999999999999999999988754    34566778999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHhhhcCC--cchhHH--HHHHHHHHHHHHHhhcCCCCcccchhhhhhhcCcchhHHHHH
Q 025372          160 GLNMKVCLAMGVAQLLIWAIWAGVTRHP--SRWKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWW  235 (254)
Q Consensus       160 ~YNM~~nv~~G~~~~~lW~~~~~~~~~~--~~~~~~--~~v~~~~~am~LEl~DFpP~~~~iDAHALWHl~Tip~~~~wy  235 (254)
                      +|||++|+++|+.|+++|...+..+++.  ..+|-+  .+|....+||||||+||||+-++||||||||++|+|++.+.|
T Consensus       224 ~YNm~~n~aigv~q~iL~~~~s~~ny~~~g~~~kr~p~~~v~~~~lA~slElfDf~pya~lIDaHAlWHL~t~~~t~~ly  303 (319)
T COG5237         224 VYNMISNCAIGVTQTILSHLVSFLNYRKLGHTFKRIPLFFVFFFFLAGSLELFDFPPYAYLIDAHALWHLITCISTPFLY  303 (319)
T ss_pred             eehhhhcchHHHHHHHHHHHHHHhhhHhhhhhhhhhhHHHHHHHHHhhhhhhhccCcHHHHhhHHHHhHhhhccchHHHH
Confidence            9999999999999999999999877654  223433  356778899999999999999999999999999999999999


Q ss_pred             HHHHhhHHHHHH
Q 025372          236 SFIRDDSEFRTT  247 (254)
Q Consensus       236 ~Fl~~D~~~~~~  247 (254)
                      +|..+|+.|-.+
T Consensus       304 ~F~~~d~~y~~n  315 (319)
T COG5237         304 LFWSGDVYYHGN  315 (319)
T ss_pred             Hhhhcceeeecc
Confidence            999999987654

>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins

Probab=97.66  E-value=0.0019  Score=55.89  Aligned_cols=153  Identities=19%  Similarity=0.190  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHHHHHHhhc-------cCCCcchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHH-HHHHHHHh
Q 025372           78 HIYGILAMNSWFWSAVFHS-------RDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPL-IAFVTTHI  149 (254)
Q Consensus        78 ~~~~~v~~~aW~wStiFH~-------RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~-~~~~~~Hv  149 (254)
                      .+|....+.-.+.||++|+       +.-..-.|+||.+-...+..+..-...-.+.-++........... +++.... 
T Consensus        45 ~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~~gI~l~i~gs~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-  123 (222)
T PF03006_consen   45 LIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDYAGIFLLIAGSYTPFIYYGFYCHPWLGWFYLAFIWILALIGIV-  123 (222)
T ss_pred             HHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcchhhhhHhHhhhhhhHHHhhccccchHHHHHHHHHHHHHHHhHH-
Confidence            4567777777899999999       345667899999976666555443332223111222221111111 1111111 


Q ss_pred             hhccccccc----ccchhhhHHHHHHHHHHHHHHHHhhhc---CCc-chhHHHHHHHHHHHHHHHhhcCCCCc--ccch-
Q 025372          150 LYLNFYKLD----HGLNMKVCLAMGVAQLLIWAIWAGVTR---HPS-RWKLWLVVVGEGLAMLLQIYDFPPYR--GFVD-  218 (254)
Q Consensus       150 ~yL~~~~fd----Y~YNM~~nv~~G~~~~~lW~~~~~~~~---~~~-~~~~~~~v~~~~~am~LEl~DFpP~~--~~iD-  218 (254)
                      ..+ ...++    ..--+.+-++.|....+...-......   .|. ......-.++-.+|+.+-..++|.-+  +-+| 
T Consensus       124 ~~~-~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G~~fy~~~~PEr~~pg~fD~  202 (222)
T PF03006_consen  124 LSL-FPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRIFFLGGWGSPDPLWLLILGGVLYLLGAVFYATRIPERWFPGKFDI  202 (222)
T ss_pred             hhc-chhhcCCccceeeehHhHHHHHHHHhhhHHHHHHhccccchHHHHHHHHHHHHHHHhHHHhhhccccccCCCCcCC
Confidence            111 11211    223334445555544444332111111   111 11112223455678889999987632  2344 


Q ss_pred             ---hhhhhhcCcchhHH
Q 025372          219 ---AHALYHAANIPLTY  232 (254)
Q Consensus       219 ---AHALWHl~Tip~~~  232 (254)
                         +|.+||+.++--+.
T Consensus       203 ~g~sHqi~Hi~v~~~~~  219 (222)
T PF03006_consen  203 WGHSHQIWHIFVVLAAL  219 (222)
T ss_pred             CCccHHHHHHHHHHHHH
Confidence               99999998765444

This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane

>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases

Probab=97.51  E-value=0.012  Score=53.36  Aligned_cols=186  Identities=16%  Similarity=0.070  Sum_probs=95.5

Q ss_pred             cccHHHHHHHHhhHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHhhccCCCcchhhhHHh
Q 025372           30 IQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSS  109 (254)
Q Consensus        30 iQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~v~~~aW~wStiFH~RD~~~TE~lDYf~  109 (254)
                      +=||.=++-++.=+++-..|+++.     ++  .+.+. .+.      ..+..+..++ +-|+.||+-=...|+-+|=..
T Consensus        24 iAEf~NtlSNl~fi~~al~gl~~~-----~~--~~~~~-~~~------l~~~~l~~VG-iGS~~FHaTl~~~~ql~DelP   88 (262)
T PF05875_consen   24 IAEFWNTLSNLAFIVAALYGLYLA-----RR--RGLER-RFA------LLYLGLALVG-IGSFLFHATLSYWTQLLDELP   88 (262)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHH-----hh--ccccc-hhH------HHHHHHHHHH-HhHHHHHhChhhhHHHhhhhh
Confidence            569998877777777766666542     11  11111 111      1233333444 889999998889999999776


Q ss_pred             hHHHHHHHHHHHHHHhccCChhHHHHHHHHHH----HHHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHh--h
Q 025372          110 AVALLGFNFILAILRAFSVRDEAARVMVAAPL----IAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAG--V  183 (254)
Q Consensus       110 A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~----~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~--~  183 (254)
                      -.-..+..++....+..  .++..|...+..+    ++..+.|...=   +. .    .-++.+|.....+.+.-..  .
T Consensus        89 Ml~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~t~~~~~~~---~p-~----~~~~~f~~~~~~~~~~~~~~~~  158 (262)
T PF05875_consen   89 MLWATLLFLYIVLTRRY--SSPRYRLALPLLLFIYAVVVTVLYFVLD---NP-V----FHQIAFASLVLLVILRSIYLIR  158 (262)
T ss_pred             HHHHHHHHHHHHhcccc--cCchhhHHHHHHHHHHHHHHHHHHhhhc---cc-h----hhhhhHHHHHHHHHHHHHHHHH
Confidence            54333333333333322  1111222222221    22223333311   11 1    1122333333333331111  1


Q ss_pred             h------cCCcchhHH-HHHHHHHHHHHHHhhcC--------------CCCcccchhhhhhhcCcchhHHHHHHHHHh
Q 025372          184 T------RHPSRWKLW-LVVVGEGLAMLLQIYDF--------------PPYRGFVDAHALYHAANIPLTYLWWSFIRD  240 (254)
Q Consensus       184 ~------~~~~~~~~~-~~v~~~~~am~LEl~DF--------------pP~~~~iDAHALWHl~Tip~~~~wy~Fl~~  240 (254)
                      .      +++...++. ..++...+|..+-..|-              .|+..++--|++||+.|---+++.-.+.+-
T Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~~~  236 (262)
T PF05875_consen  159 RRVRDACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVFVAY  236 (262)
T ss_pred             HhcCchhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            1      112222332 33455667788888886              355556789999999998888877776543

Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane

>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised

Probab=97.02  E-value=0.014  Score=51.01  Aligned_cols=93  Identities=14%  Similarity=0.155  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHHhhccC-CC----cc----hhhhHHhhHHHHHHHHHHHHHHhccCChhHHH--HHHHHHHHHHHHHHh
Q 025372           81 GILAMNSWFWSAVFHSRD-VE----LT----EKLDCSSAVALLGFNFILAILRAFSVRDEAAR--VMVAAPLIAFVTTHI  149 (254)
Q Consensus        81 ~~v~~~aW~wStiFH~RD-~~----~T----E~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r--~~~~~~~~~~~~~Hv  149 (254)
                      +.++..+=++|+.+|+.| .+    ++    ++|||......++. .....+..-++++...+  .++.+.++++..   
T Consensus        34 a~v~~~tm~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~~s~~~-~~vtl~~~a~~~~~~~~~l~~~~~~~~ai~~---  109 (186)
T PF12036_consen   34 AFVYTFTMFFSTFYHACDSGPGEIFLCIMDWHRLQNIDFIGSFLS-IWVTLCAMARLDEPLKSVLHYFGALVIAIFQ---  109 (186)
T ss_pred             HHHHHHHHHHHHhcccccCCCCceEEeechHHHHHHHHHHHHHHH-HHHHHHHhccCCHHHHHHHHHHHHHHHHHHH---
Confidence            788889999999999999 55    44    47888776544332 23333333334433222  233333333332   


Q ss_pred             hhcccccccccchhhhHHHHHHHH-HHHHHHHH
Q 025372          150 LYLNFYKLDHGLNMKVCLAMGVAQ-LLIWAIWA  181 (254)
Q Consensus       150 ~yL~~~~fdY~YNM~~nv~~G~~~-~~lW~~~~  181 (254)
                       ..  .+||+. |+..-+++|++- .+-|+..+
T Consensus       110 -~~--~~~~~~-~~~~Pi~~~~~i~~~~w~~r~  138 (186)
T PF12036_consen  110 -QK--DRWSLW-NTIGPILIGLLILLVSWLYRC  138 (186)
T ss_pred             -hh--Ccccch-hhHHHHHHHHHHHHHHHheec
Confidence             22  478854 556666666643 33444333

This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.

>TIGR01065 hlyIII channel protein, hemolysin III family

Probab=96.51  E-value=0.18  Score=44.39  Aligned_cols=151  Identities=17%  Similarity=0.153  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCC-----CcchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHhhh
Q 025372           77 WHIYGILAMNSWFWSAVFHSRDV-----ELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILY  151 (254)
Q Consensus        77 ~~~~~~v~~~aW~wStiFH~RD~-----~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~~~~~~~Hv~y  151 (254)
                      ..+|+.-.+..-..||+||+-+.     ..-+|+||.+-..+|.-+..-...-.+  +++....+..+..++..+.=+..
T Consensus        39 ~~vy~~~~~~~~~~St~yH~~~~s~~~~~~~~rlD~~gI~~lIaGsytP~~~~~~--~~~~~~~~~~~iw~la~~gi~~~  116 (204)
T TIGR01065        39 FSIYGISLILLFLVSTLYHSIPKGSKAKNWLRKIDHSMIYVLIAGTYTPFLLLAL--PGPLGWTVLWIIWGLAIGGIIYK  116 (204)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcCchhHHHHHHHccHHHHHHHHHHhhHHHHHHHc--CCcHHHHHHHHHHHHHHHHHHHH
Confidence            35678888888999999998873     155688999877666655443333333  22222222222111111111111


Q ss_pred             -cccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCcchhHHHHH---HHHHHHHHHHhhcCCCCcccchhhhhhhcCc
Q 025372          152 -LNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVV---VGEGLAMLLQIYDFPPYRGFVDAHALYHAAN  227 (254)
Q Consensus       152 -L~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~~~~~~~v---~~~~~am~LEl~DFpP~~~~iDAHALWHl~T  227 (254)
                       +...+++. .-...=+++|....+..--  ....-+. .-+..++   +.-+.++.+=..|+|--+   |-|.+||+..
T Consensus       117 ~~~~~~~r~-~r~~~y~~~G~~~v~~~~~--~~~~~~~-~~~~~l~~gg~~Y~~G~~fY~~~~p~~~---~~H~iwH~fV  189 (204)
T TIGR01065       117 LFFHKRPRW-LSLFLYLIMGWLVVLVIKP--LYHNLPG-AGFSLLAAGGLLYTVGAIFYALKWPIPF---TYHAIWHLFV  189 (204)
T ss_pred             HHccCCCch-hHHHHHHHHHHHHHHHHHH--HHHhCCH-HHHHHHHHHhHHHHcchHheeecCCCCC---CcChHHHHHH
Confidence             11223331 2333344444433222110  1111121 1111111   223456667667877433   2299999988


Q ss_pred             chhHHHHHH
Q 025372          228 IPLTYLWWS  236 (254)
Q Consensus       228 ip~~~~wy~  236 (254)
                      +--+...|-
T Consensus       190 ~~g~~~h~~  198 (204)
T TIGR01065       190 LGASACHFV  198 (204)
T ss_pred             HHHHHHHHH
Confidence            766665553

This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.

>PRK15087 hemolysin; Provisional

Probab=96.04  E-value=0.43  Score=42.61  Aligned_cols=151  Identities=17%  Similarity=0.193  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCC----cchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHhhhc
Q 025372           77 WHIYGILAMNSWFWSAVFHSRDVE----LTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYL  152 (254)
Q Consensus        77 ~~~~~~v~~~aW~wStiFH~RD~~----~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~~~~~~~Hv~yL  152 (254)
                      ..+|+.-.+..-..||+||+=..+    +=+|+||.+-..+|.-+..=...-.+  +.+..+.+..+.-....+.=+..+
T Consensus        54 ~~vy~~s~~~l~~~StlYH~~~~~~~~~~~~rlDh~~I~llIaGsytP~~~~~~--~~~~~~~l~~~iW~~a~~Gi~~~~  131 (219)
T PRK15087         54 YSLYGGSMILLFLASTLYHAIPHQRAKRWLKKFDHCAIYLLIAGTYTPFLLVGL--DSPLARGLMIVIWSLALLGILFKL  131 (219)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHccHHHHHHHHHHhhHHHHHHHc--cCHHHHHHHHHHHHHHHHHHHHHH
Confidence            356888888889999999986522    33469999866555444332222222  223333222221111111111122


Q ss_pred             -ccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCcchhHHHHH--HHHHHHHHHHhhcCCCCcccchhhhhhhcCcch
Q 025372          153 -NFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVV--VGEGLAMLLQIYDFPPYRGFVDAHALYHAANIP  229 (254)
Q Consensus       153 -~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~~~~~~~v--~~~~~am~LEl~DFpP~~~~iDAHALWHl~Tip  229 (254)
                       ...+|+ ...+..-+++|.+-.+.-.  ......+..--.+++.  +.-+.++.+=..|-+|+     +|++||+..+.
T Consensus       132 ~~~~~~r-~l~~~~Yl~mGw~~v~~~~--~l~~~~~~~~l~~l~~GG~~Y~~G~~fY~~~~~p~-----~H~IwH~fVl~  203 (219)
T PRK15087        132 AFAHRFK-VLSLVTYLAMGWLSLIVIY--QLAIKLAIGGVTLLAVGGVVYSLGVIFYVCKRIPY-----NHAIWHGFVLG  203 (219)
T ss_pred             HhcCCCc-hHHHHHHHHHHHHHHHHHH--HHHHhCCHHHHHHHHHHhHHHHhhHHHHccCCCCC-----chhHHHHHHHH
Confidence             123444 2344445555554433221  1111222211111111  12245556666676665     89999998877


Q ss_pred             hHHHHHHH
Q 025372          230 LTYLWWSF  237 (254)
Q Consensus       230 ~~~~wy~F  237 (254)
                      =+...|--
T Consensus       204 ga~~H~~a  211 (219)
T PRK15087        204 GSVCHFLA  211 (219)
T ss_pred             HHHHHHHH
Confidence            66666543

>KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms]

Probab=86.40  E-value=29  Score=32.48  Aligned_cols=155  Identities=19%  Similarity=0.183  Sum_probs=84.3

Q ss_pred             HHHhhccCCC------cchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHH-HHHHH-HHHHHHhhhcccccc--ccc
Q 025372           91 SAVFHSRDVE------LTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMV-AAPLI-AFVTTHILYLNFYKL--DHG  160 (254)
Q Consensus        91 StiFH~RD~~------~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~-~~~~~-~~~~~Hv~yL~~~~f--dY~  160 (254)
                      |+++|+=-.-      .=-||||.+-.+.+.-+......-.|.-... .|.+. ...++ .+.+.=+. + ..++  .+-
T Consensus        98 S~~~H~~~~~s~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~~-~~~iy~~~~~~lgi~~~~~~-l-~~~~~~~~~  174 (286)
T KOG0748|consen   98 SSLYHLFSCHSEKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHPF-FRLIYLPIILVLGLLAIFVS-L-SDKFRTPKR  174 (286)
T ss_pred             HHHHHHHhcccHHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHheee-c-hhhhCCccc
Confidence            9999985555      2236899997777666655544444432222 22222 11111 11111111 1 1122  123


Q ss_pred             chhhhHHHHHHHHHHH-HHHHHhhh---cCCc-chh---HHHHHHHHHHHHHHHhhcCCCCc--ccchh----hhhhhcC
Q 025372          161 LNMKVCLAMGVAQLLI-WAIWAGVT---RHPS-RWK---LWLVVVGEGLAMLLQIYDFPPYR--GFVDA----HALYHAA  226 (254)
Q Consensus       161 YNM~~nv~~G~~~~~l-W~~~~~~~---~~~~-~~~---~~~~v~~~~~am~LEl~DFpP~~--~~iDA----HALWHl~  226 (254)
                      -+-+++++++....-+ =+.+....   +.+. ...   ...-.++..+|..+=....|--+  +..|-    |-+||..
T Consensus       175 r~~R~~~f~~~~~~~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv~  254 (286)
T KOG0748|consen  175 RPLRAGVFLLLGLSGILPLLHRLILFGGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHVL  254 (286)
T ss_pred             hhhHHHHHHHHHHhhccHhhhheeeecCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHHH
Confidence            5677777776642111 11111111   1111 111   11223455677888888888733  45665    9999999


Q ss_pred             cchhHHHHHHHHHhhHHHHHHh
Q 025372          227 NIPLTYLWWSFIRDDSEFRTTA  248 (254)
Q Consensus       227 Tip~~~~wy~Fl~~D~~~~~~~  248 (254)
                      .+--++.+++=...|.+.+-+.
T Consensus       255 vv~~a~~~~~a~~~~~~~~~~~  276 (286)
T KOG0748|consen  255 VVLAALFHLEAVLLDYEWRHSH  276 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999987763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	254
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.2 bits (137), Expect = 1e-09
 Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 52/181 (28%)

Query: 112 ALLGFNFIL------AILRAFSV--------RDEAARVMVAAPLIAFVTTHILYLNFYK- 156
            LL    +L          AF++        R +     V   L A  TTHI   +    
Sbjct: 246 CLL----VLLNVQNAKAWNAFNLSCKILLTTRFKQ----VTDFLSAATTTHISLDHHSMT 297

Query: 157 LDHG---------LNMKV-CL---AMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAM 203
           L            L+ +   L    +      +  I   +    + W  W  V  + L  
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 204 LLQ--IYDFPPYRGFVDAHALYHA-------ANIP---LTYLWWSFIRDDSEFRTTALLK 251
           +++  +    P     +   ++         A+IP   L+ +W+  I+ D       L K
Sbjct: 358 IIESSLNVLEPA----EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413

Query: 252 K 252
            
Sbjct: 414 Y 414

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00