Citrus Sinensis ID: 026146

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240--
Protein Sequence
MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT
Secondary Structure (PSIPRED)
ccccccccccEEEEEccccccccHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHccccccccccEEEEEHHHHHHHHcccccccccHHHHHHHHHHHcccEEEEEcEEEcccccccccccHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEEcccHHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHcccEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
meetnknknkYSIIIPTYNERLNIALIVYLIFKhlrdvdfeiivvddgspdgtQEVVKQLQQLYgedrillrprpkklglgtaYIHGLKHASGSFVVIMdadlshhpkylpSFIKKQLEtgasivtgTRYVRSGGVHGWNLMRKLTSRGANVLAQtllwpgvsdltgsfRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRkgyhieevpitfvdrvfgssklggSEIVEYLKGLLYLLITT
Flexible Loop (DISEMBL)
meetnknknkysIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVvddgspdgTQEVVKQLQqlygedrillrprPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT
Low Complexity Region (SEG)
MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT
Disordered region (IsUnstruct)
**********YSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI**
Disordered Region (DISOPRED)
************IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT
Disordered Region (DISEMBL)
********NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT
Disordered Region (DISPRO)
*******KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	242	2.2.26 [Sep-21-2011]
O60762	260	Dolichol-phosphate mannos	yes	no	1.0	0.930	0.647	1e-91
O70152	260	Dolichol-phosphate mannos	yes	no	0.983	0.915	0.65	2e-90
Q9WU83	266	Dolichol-phosphate mannos	yes	no	0.971	0.883	0.658	2e-90
Q9VIU7	241	Probable dolichol-phospha	yes	no	0.975	0.979	0.651	3e-90
A5GFZ5	259	Dolichol-phosphate mannos	yes	no	0.971	0.907	0.641	7e-89
Q1JQ93	260	Dolichol-phosphate mannos	yes	no	0.971	0.903	0.637	4e-88
O14466	236	Dolichol-phosphate mannos	yes	no	0.958	0.983	0.641	1e-83
Q54LP3	254	Dolichol-phosphate mannos	yes	no	0.966	0.921	0.580	1e-77
P54856	294	Dolichol-phosphate mannos	N/A	no	0.917	0.755	0.324	3e-21
P14020	267	Dolichol-phosphate mannos	yes	no	0.913	0.827	0.317	4e-21

>sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase OS=Homo sapiens GN=DPM1 PE=1 SV=1

 Score =  335 bits (860), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 158/244 (64%), Positives = 200/244 (81%), Gaps = 2/244 (0%)

Query: 1   MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVK 58
           +E  +  +NKYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT++V +
Sbjct: 17  LEVRSPRQNKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAE 76

Query: 59  QLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL 118
           QL+++YG DRILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ 
Sbjct: 77  QLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQK 136

Query: 119 ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLE 178
           E    IV+GTRY  +GGV+GW+L RK+ SRGAN L Q LL PG SDLTGSFRLY+K VLE
Sbjct: 137 EGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLE 196

Query: 179 DVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL 238
            +I  CVSKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L
Sbjct: 197 KLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTL 256

Query: 239 LITT 242
             TT
Sbjct: 257 FATT 260

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 3

>sp|O70152|DPM1_MOUSE Dolichol-phosphate mannosyltransferase OS=Mus musculus GN=Dpm1 PE=2 SV=1

 Score =  332 bits (851), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 156/240 (65%), Positives = 197/240 (82%), Gaps = 2/240 (0%)

Query: 5   NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQ 62
           +  ++KYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT+EV +QL +
Sbjct: 21  SSRQDKYSVLLPTYNERENLPLIVWLLVKSFSESAINYEIIIIDDGSPDGTREVAEQLAE 80

Query: 63  LYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGA 122
           +YG DRILLRPR KKLGLGTAYIHG+KHA+G++V+IMDADLSHHPK++P FI+KQ E   
Sbjct: 81  IYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNF 140

Query: 123 SIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVIS 182
            IV+GTRY  +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I 
Sbjct: 141 DIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIE 200

Query: 183 SCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
            CVSKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct: 201 KCVSKGYVFQMEMIVRARQMNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q9WU83|DPM1_CRIGR Dolichol-phosphate mannosyltransferase OS=Cricetulus griseus GN=DPM1 PE=2 SV=1

 Score =  332 bits (850), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 156/237 (65%), Positives = 197/237 (83%), Gaps = 2/237 (0%)

Query: 8   KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           ++KYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT+EV +QL+++YG
Sbjct: 30  RDKYSVLLPTYNERENLPLIVWLLVKSFSESSINYEIIIIDDGSPDGTREVAEQLEKIYG 89

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
            DRILLRPR KKLGLGTAYIHG+KHA+G++V+IMDADLSHHPK++P FI+KQ E    IV
Sbjct: 90  PDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNFDIV 149

Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
           +GTRY  +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I  CV
Sbjct: 150 SGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCV 209

Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
           SKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct: 210 SKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 266

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q9VIU7|DPM1_DROME Probable dolichol-phosphate mannosyltransferase OS=Drosophila melanogaster GN=CG10166 PE=3 SV=1

 Score =  331 bits (848), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 196/238 (82%), Gaps = 2/238 (0%)

Query: 7   NKNKYSIIIPTYNERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLY 64
           N +KYSI++PTYNE+ N+ +I++LI K+++   +++E+IV+DDGSPDGT +V K LQ++Y
Sbjct: 4   NGHKYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPDGTLDVAKDLQKIY 63

Query: 65  GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
           GED+I+LRPR  KLGLGTAYIHG+KHA+G F+VI+DADLSHHPK++P FIK Q E    I
Sbjct: 64  GEDKIVLRPRGSKLGLGTAYIHGIKHATGDFIVIIDADLSHHPKFIPEFIKLQQEGNYDI 123

Query: 125 VTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
           V+GTRY  +GGV GW+  RKL SRGAN L+Q LL P  SDLTGSFRLYKK VLE  I+SC
Sbjct: 124 VSGTRYAGNGGVFGWDFKRKLISRGANFLSQVLLRPNASDLTGSFRLYKKDVLEKCIASC 183

Query: 185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
           VSKGYVFQMEM+VRA + GY I EVPITFVDR++G+SKLGG+EI+++ K LLYL  TT
Sbjct: 184 VSKGYVFQMEMLVRARQHGYTIAEVPITFVDRIYGTSKLGGTEIIQFAKNLLYLFATT 241

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|A5GFZ5|DPM1_PIG Dolichol-phosphate mannosyltransferase OS=Sus scrofa GN=DPM1 PE=3 SV=1

 Score =  327 bits (837), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 196/237 (82%), Gaps = 2/237 (0%)

Query: 8   KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           ++KYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT+++ +QL ++YG
Sbjct: 23  QDKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDIAEQLVKIYG 82

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
            D+ILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ E    IV
Sbjct: 83  SDKILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIV 142

Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
           +GTRY  +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I  CV
Sbjct: 143 SGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCV 202

Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
           SKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct: 203 SKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 259

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q1JQ93|DPM1_BOVIN Dolichol-phosphate mannosyltransferase OS=Bos taurus GN=DPM1 PE=2 SV=1

 Score =  324 bits (830), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 194/237 (81%), Gaps = 2/237 (0%)

Query: 8   KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           ++KYS+++PTYNER N+  IV+L+ K   +   ++EII++DDGSPDGT++V +QL+++YG
Sbjct: 24  QDKYSVLLPTYNERENLPFIVWLLVKSFSESGFNYEIIIIDDGSPDGTRDVAEQLEKIYG 83

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
            DRILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ E    IV
Sbjct: 84  SDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIV 143

Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
           +GTRY  +GGV+GW+L RK+ SR AN + Q LL PG SDLTGSFRLY+K VL+ +I  C+
Sbjct: 144 SGTRYKGNGGVYGWDLKRKIISRVANFITQILLRPGASDLTGSFRLYRKEVLQKLIGKCI 203

Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
           SKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct: 204 SKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|O14466|DPM1_SCHPO Dolichol-phosphate mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpm1 PE=2 SV=1

 Score =  309 bits (791), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 150/234 (64%), Positives = 181/234 (77%), Gaps = 2/234 (0%)

Query: 9   NKYSIIIPTYNERLNIALIVYLIFKHL--RDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
           +KYS+++PTYNER N+ +I YLI K      +D+EI+++DD SPDGTQEV K+LQ++YGE
Sbjct: 2   SKYSVLLPTYNERKNLPIITYLIAKTFDQEKLDWEIVIIDDASPDGTQEVAKELQKIYGE 61

Query: 67  DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126
           D+ILL+PR  KLGLGTAYIHGLK A+G FV+IMDAD SHHPKYLP FIK Q E    IV 
Sbjct: 62  DKILLKPRSGKLGLGTAYIHGLKFATGDFVIIMDADFSHHPKYLPEFIKLQKEHNYDIVL 121

Query: 127 GTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVS 186
           GTRY + GGV+GWNL RK  SRGAN+LA T+L  GVSD+TGSFRLYKK VLE ++S   S
Sbjct: 122 GTRYAKDGGVYGWNLKRKFISRGANLLASTVLGTGVSDVTGSFRLYKKPVLETLMSEVTS 181

Query: 187 KGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
           KGYVFQME+I RA    Y I EVPI FVDR++G SKLG  +I+ YLKG+  LL 
Sbjct: 182 KGYVFQMEIIARAREHNYTIGEVPIAFVDRLYGESKLGMDDILGYLKGVFSLLF 235

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q54LP3|DPM1_DICDI Dolichol-phosphate mannosyltransferase OS=Dictyostelium discoideum GN=dpm1 PE=3 SV=1

 Score =  289 bits (739), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 137/236 (58%), Positives = 182/236 (77%), Gaps = 2/236 (0%)

Query: 8   KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           K+KY+II+PTY ER N+ +I++LI   L    +D+E+++V+D SPDGT EV +QLQ++YG
Sbjct: 17  KDKYTIILPTYKERENLPIIIWLISTELEKCFIDYEVVIVEDNSPDGTLEVAQQLQKIYG 76

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
           E++I +  RP K+GLG+AY+ G+K ++G++V++MDADLSHHPK++P FI+KQ +    IV
Sbjct: 77  EEKIKILSRPGKMGLGSAYMDGIKKSTGNWVILMDADLSHHPKFIPQFIEKQKKLNCEIV 136

Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
           TGTRY   GGV GWNL RKLTSR AN +A  LL PGVSDLTGSFRLY+K VLE +I+   
Sbjct: 137 TGTRYQSGGGVFGWNLYRKLTSRVANYIASVLLTPGVSDLTGSFRLYRKDVLEKLITQNK 196

Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLIT 241
           SKGYVFQ+EM+VRA + GY + EVPITFVDR+FG S L   EIV +LK +L L + 
Sbjct: 197 SKGYVFQVEMMVRANQLGYQVGEVPITFVDRIFGVSNLDSGEIVGFLKSVLNLFMN 252

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|P54856|DPM1_USTMA Dolichol-phosphate mannosyltransferase OS=Ustilago maydis (strain 521 / FGSC 9021) GN=DPM1 PE=3 SV=2

 Score =  102 bits (254), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 12/234 (5%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRD------VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           S+I+P + E LN+  +V  +             + EII+VDD S DG+ E V  LQ    
Sbjct: 31  SVIVPAFRENLNLRPLVTRLSSAFASQSSSELANTEIIIVDDNSRDGSVETVSALQSEGY 90

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
             RI++R   +  GL +A + G + A G  ++ MDADL H P+ +PS +   L    S V
Sbjct: 91  NVRIIVRTSER--GLSSAVVRGFREARGQRMICMDADLQHPPEAVPSLLLA-LNGQKSFV 147

Query: 126 TGTRY-VRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
            GTRY V       W L R++ S GA +LA+ L     SD    F    K          
Sbjct: 148 LGTRYGVGVSMDKDWPLHRRIISSGARMLARPLT--SASDPMSGFFGITKHSFHTADHHI 205

Query: 185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL 238
            ++G+   ++++V++      I EVP +F  R  G SKL G  + +YL+ L+ L
Sbjct: 206 NAQGFKIALDLLVKSGVHSTDIAEVPFSFGLRQEGESKLDGKVMFKYLQQLVEL 259

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|P14020|DPM1_YEAST Dolichol-phosphate mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DPM1 PE=1 SV=3

 Score =  101 bits (252), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 12/233 (5%)

Query: 10  KYSIIIPTYNERLNIALIVYLIFKHLRDV---DFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
           +YS+I+P Y+E+LNI  +   +F  +        E+I VDD S DG+ E V  L      
Sbjct: 4   EYSVIVPAYHEKLNIKPLTTRLFAGMSPEMAKKTELIFVDDNSQDGSVEEVDALAHQGYN 63

Query: 67  DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126
            RI++R   +  GL +A + G   A G ++V MDADL H P+ +P   +   +   ++  
Sbjct: 64  VRIIVRTNER--GLSSAVLKGFYEAKGQYLVCMDADLQHPPETVPKLFESLHDHAFTL-- 119

Query: 127 GTRYVRSGGV-HGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
           GTRY    G+   W + R++ S  A ++A+ L       ++G F L KK +         
Sbjct: 120 GTRYAPGVGIDKDWPMYRRVISSTARMMARPLTI-ASDPMSGFFGLQKKYLENCNPRDIN 178

Query: 186 SKGYVFQMEMIVR---ACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGL 235
           S+G+   +E++ +          I EVP TF  R  G SKL G  I++YL+ L
Sbjct: 179 SQGFKIALELLAKLPLPRDPRVAIGEVPFTFGVRTEGESKLSGKVIIQYLQQL 231

Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	242
297850478	246	hypothetical protein ARALYDRAFT_889509 [	1.0	0.983	0.921	1e-127
18394881	246	dolichol-phosphate mannosyltransferase [	1.0	0.983	0.917	1e-126
255539212	238	dolichol-phosphate mannosyltransferase,	0.975	0.991	0.936	1e-126
21554116	242	unknown [Arabidopsis thaliana]	1.0	1.0	0.913	1e-126
224061879	240	predicted protein [Populus trichocarpa]	0.983	0.991	0.928	1e-126
225459870	243	PREDICTED: dolichol-phosphate mannosyltr	1.0	0.995	0.913	1e-126
224086036	238	predicted protein [Populus trichocarpa]	0.979	0.995	0.919	1e-124
356521438	243	PREDICTED: dolichol-phosphate mannosyltr	0.983	0.979	0.894	1e-123
449455593	242	PREDICTED: dolichol-phosphate mannosyltr	1.0	1.0	0.880	1e-123
388516107	243	unknown [Medicago truncatula]	0.995	0.991	0.871	1e-122

>gi|297850478|ref|XP_002893120.1| hypothetical protein ARALYDRAFT_889509 [Arabidopsis lyrata subsp. lyrata] gi|297338962|gb|EFH69379.1| hypothetical protein ARALYDRAFT_889509 [Arabidopsis lyrata subsp. lyrata]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/242 (92%), Positives = 231/242 (95%)

Query: 1   MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQL 60
           ME   + K KYSIIIPTYNERLNIA+IVYLIFKHLRDVDFEIIVVDDGSPDGTQE+VKQL
Sbjct: 5   MEPKGEKKYKYSIIIPTYNERLNIAIIVYLIFKHLRDVDFEIIVVDDGSPDGTQEIVKQL 64

Query: 61  QQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET 120
           QQLYGEDRILLR R KKLGLGTAYIHGLKHA+G FVVIMDADLSHHPKYLPSFIKKQLET
Sbjct: 65  QQLYGEDRILLRARAKKLGLGTAYIHGLKHATGDFVVIMDADLSHHPKYLPSFIKKQLET 124

Query: 121 GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
            ASIVTGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV
Sbjct: 125 NASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 184

Query: 181 ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
           ISSCVSKGYVFQMEMIVRA RKGYHIEEVPITFVDRVFG+SKLGGSEIVEYLKGL+YLL+
Sbjct: 185 ISSCVSKGYVFQMEMIVRATRKGYHIEEVPITFVDRVFGTSKLGGSEIVEYLKGLVYLLL 244

Query: 241 TT 242
           TT
Sbjct: 245 TT 246

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394881|ref|NP_564118.1| dolichol-phosphate mannosyltransferase [Arabidopsis thaliana] gi|8886954|gb|AAF80640.1|AC069251_33 F2D10.6 [Arabidopsis thaliana] gi|29028862|gb|AAO64810.1| At1g20575 [Arabidopsis thaliana] gi|51969260|dbj|BAD43322.1| hypothetical protein [Arabidopsis thaliana] gi|110743122|dbj|BAE99453.1| hypothetical protein [Arabidopsis thaliana] gi|332191868|gb|AEE29989.1| dolichol-phosphate mannosyltransferase [Arabidopsis thaliana]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/242 (91%), Positives = 230/242 (95%)

Query: 1   MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQL 60
           ME   + K KYSIIIPTYNERLNIA+IVYLIFKHLRDVDFEIIVVDDGSPDGTQE+VKQL
Sbjct: 5   METKGEKKYKYSIIIPTYNERLNIAIIVYLIFKHLRDVDFEIIVVDDGSPDGTQEIVKQL 64

Query: 61  QQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET 120
           QQLYGEDRILLR R KKLGLGTAYIHGLKHA+G FVVIMDADLSHHPKYLPSFIKKQLET
Sbjct: 65  QQLYGEDRILLRARAKKLGLGTAYIHGLKHATGDFVVIMDADLSHHPKYLPSFIKKQLET 124

Query: 121 GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
            ASIVTGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKS LEDV
Sbjct: 125 NASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSALEDV 184

Query: 181 ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
           ISSCVSKGYVFQMEMIVRA RKGYHIEEVPITFVDRVFG+SKLGGSEIVEYLKGL+YLL+
Sbjct: 185 ISSCVSKGYVFQMEMIVRATRKGYHIEEVPITFVDRVFGTSKLGGSEIVEYLKGLVYLLL 244

Query: 241 TT 242
           TT
Sbjct: 245 TT 246

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539212|ref|XP_002510671.1| dolichol-phosphate mannosyltransferase, putative [Ricinus communis] gi|223551372|gb|EEF52858.1| dolichol-phosphate mannosyltransferase, putative [Ricinus communis]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/236 (93%), Positives = 229/236 (97%)

Query: 7   NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
            KNKYS+IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE
Sbjct: 3   EKNKYSLIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE 62

Query: 67  DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126
           DR+LLRPRP+KLGLGTAYIHGLKHASG+FVVIMDADLSHHPKYLPSFI+KQ ETGASIVT
Sbjct: 63  DRVLLRPRPEKLGLGTAYIHGLKHASGNFVVIMDADLSHHPKYLPSFIEKQSETGASIVT 122

Query: 127 GTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVS 186
           GTRYV  GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED+ISS VS
Sbjct: 123 GTRYVTGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDIISSVVS 182

Query: 187 KGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
           KGYVFQMEMIVRA RKGYHIEEVPITF+DRVFGSSKLGGSEIVEYLKGL YLL+TT
Sbjct: 183 KGYVFQMEMIVRASRKGYHIEEVPITFIDRVFGSSKLGGSEIVEYLKGLAYLLVTT 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554116|gb|AAM63196.1| unknown [Arabidopsis thaliana]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/242 (91%), Positives = 230/242 (95%)

Query: 1   MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQL 60
           ME   + K KYSIIIPT+NERLNIA+IVYLIFKHLRDVDFEIIVVDDGSPDGTQE+VKQL
Sbjct: 1   METKGEKKYKYSIIIPTFNERLNIAIIVYLIFKHLRDVDFEIIVVDDGSPDGTQEIVKQL 60

Query: 61  QQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET 120
           QQLYGEDRILLR R KKLGLGTAYIHGLKHA+G FVVIMDADLSHHPKYLPSFIKKQLET
Sbjct: 61  QQLYGEDRILLRARAKKLGLGTAYIHGLKHATGDFVVIMDADLSHHPKYLPSFIKKQLET 120

Query: 121 GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
            ASIVTGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKS LEDV
Sbjct: 121 NASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSALEDV 180

Query: 181 ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
           ISSCVSKGYVFQMEMIVRA RKGYHIEEVPITFVDRVFG+SKLGGSEIVEYLKGL+YLL+
Sbjct: 181 ISSCVSKGYVFQMEMIVRATRKGYHIEEVPITFVDRVFGTSKLGGSEIVEYLKGLVYLLL 240

Query: 241 TT 242
           TT
Sbjct: 241 TT 242

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061879|ref|XP_002300644.1| predicted protein [Populus trichocarpa] gi|222842370|gb|EEE79917.1| predicted protein [Populus trichocarpa]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/238 (92%), Positives = 229/238 (96%)

Query: 5   NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY 64
            + KNKYSII+PTYNERLNIALIVYLIFKHLRDVDFEII+VDDGSPDGTQEVVKQLQQ+Y
Sbjct: 3   KEKKNKYSIIVPTYNERLNIALIVYLIFKHLRDVDFEIIIVDDGSPDGTQEVVKQLQQVY 62

Query: 65  GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
           GED ILLRPR KKLGLGTAYIHGLKHASG+FVVIMDADLSHHPKYLPSFIKKQLETGASI
Sbjct: 63  GEDHILLRPRAKKLGLGTAYIHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASI 122

Query: 125 VTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
           VTGTRYV+ GGVHGWNL RKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED+ISS 
Sbjct: 123 VTGTRYVKGGGVHGWNLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDIISSV 182

Query: 185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
           VSKGYVFQMEMIVRA RKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGL YLL+TT
Sbjct: 183 VSKGYVFQMEMIVRASRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLAYLLVTT 240

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459870|ref|XP_002285933.1| PREDICTED: dolichol-phosphate mannosyltransferase [Vitis vinifera] gi|302141662|emb|CBI18865.3| unnamed protein product [Vitis vinifera]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/243 (91%), Positives = 234/243 (96%), Gaps = 1/243 (0%)

Query: 1   MEETNKNK-NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQ 59
           MEE +KN  NKYSII+PTYNERLNIALIV+LIFKHLRDVDFEII+VDDGSPDGTQE+VKQ
Sbjct: 1   MEEQHKNGGNKYSIIVPTYNERLNIALIVFLIFKHLRDVDFEIIIVDDGSPDGTQEIVKQ 60

Query: 60  LQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE 119
           LQQ+YGEDRILLR RPKKLGLGTAY HGLKHASG+FVVIMDADLSHHPKYLPSFIKKQLE
Sbjct: 61  LQQVYGEDRILLRARPKKLGLGTAYSHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLE 120

Query: 120 TGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED 179
           TGASIVTGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLE+
Sbjct: 121 TGASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEE 180

Query: 180 VISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLL 239
           VISSCVSKGYVFQME+IVRA RKGYHIEEVPITFVDR+FGSSKLGGSEIV YLKGL YLL
Sbjct: 181 VISSCVSKGYVFQMEIIVRASRKGYHIEEVPITFVDRLFGSSKLGGSEIVGYLKGLAYLL 240

Query: 240 ITT 242
           +TT
Sbjct: 241 VTT 243

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086036|ref|XP_002307788.1| predicted protein [Populus trichocarpa] gi|222857237|gb|EEE94784.1| predicted protein [Populus trichocarpa]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/237 (91%), Positives = 229/237 (96%)

Query: 6   KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           +  N+YSII+PTYNERLNIALIVYLIFKHL+DV+FEIIVVDDGSPDGTQEVVKQLQ++YG
Sbjct: 2   EKNNRYSIIVPTYNERLNIALIVYLIFKHLQDVEFEIIVVDDGSPDGTQEVVKQLQKVYG 61

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
           EDRILLRPR KKLGLGTAYIHGLKHASG+FVVIMDADLSHHPKYLPSFIKKQLETGASIV
Sbjct: 62  EDRILLRPRAKKLGLGTAYIHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASIV 121

Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
           TGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED+ISS V
Sbjct: 122 TGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDIISSVV 181

Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
           SKGYVFQMEMIVRA RKGY IEEVPITFVDRVFGSSKLGGSEIVEYLKGL YLL+TT
Sbjct: 182 SKGYVFQMEMIVRASRKGYQIEEVPITFVDRVFGSSKLGGSEIVEYLKGLAYLLVTT 238

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521438|ref|XP_003529363.1| PREDICTED: dolichol-phosphate mannosyltransferase-like [Glycine max]

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/238 (89%), Positives = 226/238 (94%)

Query: 5   NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY 64
            K KNKYSII+PTYNERLNI LIVYLIFKHL D DFEII+VDDGSPDGTQ+VVKQLQQ+Y
Sbjct: 6   QKQKNKYSIIVPTYNERLNIGLIVYLIFKHLGDADFEIIIVDDGSPDGTQDVVKQLQQVY 65

Query: 65  GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
           GEDRILLR RP+KLGLGTAYIHG+KHASG+FVVIMDADLSHHPKYLP+FI+KQ ETGA I
Sbjct: 66  GEDRILLRARPRKLGLGTAYIHGMKHASGNFVVIMDADLSHHPKYLPNFIRKQSETGADI 125

Query: 125 VTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
           VTGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLY+KSVLED+IS C
Sbjct: 126 VTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYRKSVLEDIISCC 185

Query: 185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
           VSKGYVFQMEMIVRA RKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGL YLL+TT
Sbjct: 186 VSKGYVFQMEMIVRASRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLAYLLVTT 243

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455593|ref|XP_004145537.1| PREDICTED: dolichol-phosphate mannosyltransferase-like [Cucumis sativus] gi|449512678|ref|XP_004164113.1| PREDICTED: dolichol-phosphate mannosyltransferase-like [Cucumis sativus]

 Score =  445 bits (1144), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/242 (88%), Positives = 230/242 (95%)

Query: 1   MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQL 60
           M E  K ++KYS+I+PTYNER+NIAL+VYLIFKHL DVDFEIIVVDDGSPDGTQEVVKQL
Sbjct: 1   MAEPEKERDKYSLIVPTYNERINIALLVYLIFKHLPDVDFEIIVVDDGSPDGTQEVVKQL 60

Query: 61  QQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET 120
           Q LYGEDRILLR RP+KLGLGTAY HGLKHA+G++VVIMDADLSHHPKYLPSFI+KQL+T
Sbjct: 61  QGLYGEDRILLRARPRKLGLGTAYCHGLKHATGNYVVIMDADLSHHPKYLPSFIQKQLQT 120

Query: 121 GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
           GA IVTGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED+
Sbjct: 121 GADIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDI 180

Query: 181 ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
           I+S VSKGYVFQMEMIVRA RKGYHIEEVPITFVDRVFG+SKLGGSEIVEYLKGLLYLL+
Sbjct: 181 ITSVVSKGYVFQMEMIVRATRKGYHIEEVPITFVDRVFGTSKLGGSEIVEYLKGLLYLLV 240

Query: 241 TT 242
           TT
Sbjct: 241 TT 242

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516107|gb|AFK46115.1| unknown [Medicago truncatula]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/241 (87%), Positives = 229/241 (95%)

Query: 2   EETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQ 61
           E+  K KNKYSII+PTYNERLNI+LI+YLIFKHL+ VDFE+IVVDDGSPDGTQ+VVKQLQ
Sbjct: 3   EQHQKQKNKYSIIVPTYNERLNISLILYLIFKHLQGVDFEVIVVDDGSPDGTQDVVKQLQ 62

Query: 62  QLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETG 121
           Q+YGEDRILLR RP+K+GLG AYIHG+KHASG+FVVIMDADLSHHPKYLP F++KQLETG
Sbjct: 63  QVYGEDRILLRARPRKMGLGPAYIHGMKHASGNFVVIMDADLSHHPKYLPGFLRKQLETG 122

Query: 122 ASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVI 181
           A IVTGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKS LED+I
Sbjct: 123 ADIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSALEDII 182

Query: 182 SSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLIT 241
           S CVSKGYVFQMEMIVRA RKGYHIEEVPITFVDRV+GSSKLGGSEIVEYLKGL+YLL+T
Sbjct: 183 SCCVSKGYVFQMEMIVRASRKGYHIEEVPITFVDRVYGSSKLGGSEIVEYLKGLVYLLMT 242

Query: 242 T 242
           T
Sbjct: 243 T 243

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	242
TAIR|locus:505006134	246	DPMS1 "AT1G20575" [Arabidopsis	1.0	0.983	0.917	2.7e-116
UNIPROTKB|O60762	260	DPM1 "Dolichol-phosphate manno	1.0	0.930	0.647	1.7e-84
UNIPROTKB|H0Y368	295	DPM1 "Dolichol-phosphate manno	0.615	0.505	0.596	5.7e-84
ZFIN|ZDB-GENE-040801-115	250	dpm1 "dolichyl-phosphate manno	0.966	0.936	0.669	9.1e-84
UNIPROTKB|Q4QR31	247	dpm1 "MGC114892 protein" [Xeno	0.983	0.963	0.652	1.5e-83
MGI|MGI:1330239	260	Dpm1 "dolichol-phosphate (beta	0.983	0.915	0.65	2.4e-83
RGD|1310120	260	Dpm1 "dolichyl-phosphate manno	0.983	0.915	0.645	2.4e-83
FB|FBgn0032799	241	CG10166 [Drosophila melanogast	0.975	0.979	0.651	3.1e-83
UNIPROTKB|J9NZX5	260	DPM1 "Uncharacterized protein"	0.971	0.903	0.649	6.4e-83
UNIPROTKB|A5GFZ5	259	DPM1 "Dolichol-phosphate manno	0.971	0.907	0.641	3.6e-82

TAIR|locus:505006134 DPMS1 "AT1G20575" [Arabidopsis thaliana (taxid:3702)]

 Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
 Identities = 222/242 (91%), Positives = 230/242 (95%)

Query:     1 MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQL 60
             ME   + K KYSIIIPTYNERLNIA+IVYLIFKHLRDVDFEIIVVDDGSPDGTQE+VKQL
Sbjct:     5 METKGEKKYKYSIIIPTYNERLNIAIIVYLIFKHLRDVDFEIIVVDDGSPDGTQEIVKQL 64

Query:    61 QQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET 120
             QQLYGEDRILLR R KKLGLGTAYIHGLKHA+G FVVIMDADLSHHPKYLPSFIKKQLET
Sbjct:    65 QQLYGEDRILLRARAKKLGLGTAYIHGLKHATGDFVVIMDADLSHHPKYLPSFIKKQLET 124

Query:   121 GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
              ASIVTGTRYV+ GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKS LEDV
Sbjct:   125 NASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSALEDV 184

Query:   181 ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
             ISSCVSKGYVFQMEMIVRA RKGYHIEEVPITFVDRVFG+SKLGGSEIVEYLKGL+YLL+
Sbjct:   185 ISSCVSKGYVFQMEMIVRATRKGYHIEEVPITFVDRVFGTSKLGGSEIVEYLKGLVYLLL 244

Query:   241 TT 242
             TT
Sbjct:   245 TT 246

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISS

GO:0004686 "elongation factor-2 kinase activity" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006486 "protein glycosylation" evidence=ISS

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IPI

GO:0060359 "response to ammonium ion" evidence=IMP

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

UNIPROTKB|O60762 DPM1 "Dolichol-phosphate mannosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 158/244 (64%), Positives = 200/244 (81%)

Query:     1 MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVK 58
             +E  +  +NKYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT++V +
Sbjct:    17 LEVRSPRQNKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAE 76

Query:    59 QLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL 118
             QL+++YG DRILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ 
Sbjct:    77 QLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQK 136

Query:   119 ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLE 178
             E    IV+GTRY  +GGV+GW+L RK+ SRGAN L Q LL PG SDLTGSFRLY+K VLE
Sbjct:   137 EGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLE 196

Query:   179 DVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL 238
              +I  CVSKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L
Sbjct:   197 KLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTL 256

Query:   239 LITT 242
               TT
Sbjct:   257 FATT 260

GO:0005537 "mannose binding" evidence=IEA

GO:0019673 "GDP-mannose metabolic process" evidence=IEA

GO:0043178 "alcohol binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006506 "GPI anchor biosynthetic process" evidence=IDA

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=IDA

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0019348 "dolichol metabolic process" evidence=IDA

GO:0004169 "dolichyl-phosphate-mannose-protein mannosyltransferase activity" evidence=IDA

GO:0035268 "protein mannosylation" evidence=IDA

GO:0035269 "protein O-linked mannosylation" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA;TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0006501 "C-terminal protein lipidation" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|H0Y368 DPM1 "Dolichol-phosphate mannosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 513 (185.6 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
 Identities = 90/151 (59%), Positives = 125/151 (82%)

Query:     1 MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVK 58
             +E  +  +NKYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT++V +
Sbjct:    17 LEVRSPRQNKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAE 76

Query:    59 QLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL 118
             QL+++YG DRILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ 
Sbjct:    77 QLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQK 136

Query:   119 ETGASIVTGTRYVRSGGVHGWNLMRKLTSRG 149
             E    IV+GTRY  +GGV+GW+L RK+ S G
Sbjct:   137 EGNFDIVSGTRYKGNGGVYGWDLKRKIISDG 167

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

ZFIN|ZDB-GENE-040801-115 dpm1 "dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit" [Danio rerio (taxid:7955)]

 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 158/236 (66%), Positives = 196/236 (83%)

Query:     9 NKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
             +KYS+++PTYNER N+ LIV+L+ K+  +   ++EIIV+DDGSPDGT ++ +QLQ++YG 
Sbjct:    15 DKYSVLLPTYNERENLPLIVWLLVKYFGESGYNYEIIVIDDGSPDGTLQIAEQLQKIYGA 74

Query:    67 DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126
             D+ILLRPR +KLGLGTAYIHG+KHA+G+FV+IMDADLSHHPK++P FI+KQ E G  +V+
Sbjct:    75 DKILLRPRAEKLGLGTAYIHGIKHATGNFVIIMDADLSHHPKFIPQFIEKQKEGGYDLVS 134

Query:   127 GTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVS 186
             GTRY   GGV+GW+L RKL SRGAN + Q LL PG SDLTGSFRLYKK VLE ++  CVS
Sbjct:   135 GTRYRGDGGVYGWDLRRKLISRGANFVTQVLLRPGASDLTGSFRLYKKEVLEKLVEQCVS 194

Query:   187 KGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
             KGYVFQMEMIVRA + GY I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct:   195 KGYVFQMEMIVRARQLGYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 250

GO:0004169 "dolichyl-phosphate-mannose-protein mannosyltransferase activity" evidence=ISS

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0035268 "protein mannosylation" evidence=ISS

GO:0035269 "protein O-linked mannosylation" evidence=ISS

GO:0006506 "GPI anchor biosynthetic process" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|Q4QR31 dpm1 "MGC114892 protein" [Xenopus laevis (taxid:8355)]

 Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
 Identities = 158/242 (65%), Positives = 198/242 (81%)

Query:     5 NKNKN--KYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQL 60
             NK K+  KYS+++PTYNER N+ +IV+L+ +  RD   ++EIIV+DDGSPDGT EV +QL
Sbjct:     6 NKRKSGDKYSVLLPTYNERENLPIIVWLLVRCFRDSGYNYEIIVIDDGSPDGTLEVAQQL 65

Query:    61 QQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET 120
             Q++YG D+ILLRPR KKLGLGTAY+HG++HA+G+F++IMDADLSHHPK++P FI+KQ E 
Sbjct:    66 QKIYGSDKILLRPRAKKLGLGTAYVHGMQHATGNFIIIMDADLSHHPKFIPEFIRKQKEG 125

Query:   121 GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
                IV+GTRY  +GGV+GW+L RKL SRGAN + Q LL PG SDLTGSFRLY+K VL+ +
Sbjct:   126 SYDIVSGTRYAGNGGVYGWDLKRKLISRGANFITQVLLRPGASDLTGSFRLYRKDVLQKL 185

Query:   181 ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
             +  CVSKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  
Sbjct:   186 VERCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFA 245

Query:   241 TT 242
             TT
Sbjct:   246 TT 247

GO:0004169 "dolichyl-phosphate-mannose-protein mannosyltransferase activity" evidence=ISS

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0006506 "GPI anchor biosynthetic process" evidence=ISS

GO:0035268 "protein mannosylation" evidence=ISS

GO:0035269 "protein O-linked mannosylation" evidence=ISS

MGI|MGI:1330239 Dpm1 "dolichol-phosphate (beta-D) mannosyltransferase 1" [Mus musculus (taxid:10090)]

 Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
 Identities = 156/240 (65%), Positives = 197/240 (82%)

Query:     5 NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQ 62
             +  ++KYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT+EV +QL +
Sbjct:    21 SSRQDKYSVLLPTYNERENLPLIVWLLVKSFSESAINYEIIIIDDGSPDGTREVAEQLAE 80

Query:    63 LYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGA 122
             +YG DRILLRPR KKLGLGTAYIHG+KHA+G++V+IMDADLSHHPK++P FI+KQ E   
Sbjct:    81 IYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNF 140

Query:   123 SIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVIS 182
              IV+GTRY  +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I 
Sbjct:   141 DIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIE 200

Query:   183 SCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
              CVSKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct:   201 KCVSKGYVFQMEMIVRARQMNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260

GO:0004169 "dolichyl-phosphate-mannose-protein mannosyltransferase activity" evidence=ISO

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISO;IMP

GO:0005537 "mannose binding" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0006506 "GPI anchor biosynthetic process" evidence=ISO;IMP

GO:0016020 "membrane" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0019348 "dolichol metabolic process" evidence=ISO;IMP

GO:0019673 "GDP-mannose metabolic process" evidence=ISO

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=ISO

GO:0035268 "protein mannosylation" evidence=ISO

GO:0035269 "protein O-linked mannosylation" evidence=ISO

GO:0043178 "alcohol binding" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

RGD|1310120 Dpm1 "dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit" [Rattus norvegicus (taxid:10116)]

 Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
 Identities = 155/240 (64%), Positives = 198/240 (82%)

Query:     5 NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQ 62
             +  ++KYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT+EV +QL++
Sbjct:    21 SSRQDKYSVLLPTYNERENLPLIVWLLVKSFSESAINYEIIIIDDGSPDGTREVAEQLEK 80

Query:    63 LYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGA 122
             +YG DRILLRPR KKLGLGTAYIHG+KHA+G++V+IMDADLSHHPK++P FI+KQ E   
Sbjct:    81 IYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNF 140

Query:   123 SIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVIS 182
              IV+GTRY  +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I 
Sbjct:   141 DIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIE 200

Query:   183 SCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
              CVSKGYVFQMEMIVRA +  Y + EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct:   201 KCVSKGYVFQMEMIVRARQMDYTVGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260

GO:0004169 "dolichyl-phosphate-mannose-protein mannosyltransferase activity" evidence=IEA;ISO

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISO;IDA

GO:0005537 "mannose binding" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISO

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA;ISO

GO:0016020 "membrane" evidence=ISO

GO:0019348 "dolichol metabolic process" evidence=ISO;IDA

GO:0019673 "GDP-mannose metabolic process" evidence=IDA

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IEA;ISO

GO:0035268 "protein mannosylation" evidence=ISO

GO:0035269 "protein O-linked mannosylation" evidence=IEA;ISO

GO:0043178 "alcohol binding" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

FB|FBgn0032799 CG10166 [Drosophila melanogaster (taxid:7227)]

 Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
 Identities = 155/238 (65%), Positives = 196/238 (82%)

Query:     7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLY 64
             N +KYSI++PTYNE+ N+ +I++LI K+++   +++E+IV+DDGSPDGT +V K LQ++Y
Sbjct:     4 NGHKYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPDGTLDVAKDLQKIY 63

Query:    65 GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
             GED+I+LRPR  KLGLGTAYIHG+KHA+G F+VI+DADLSHHPK++P FIK Q E    I
Sbjct:    64 GEDKIVLRPRGSKLGLGTAYIHGIKHATGDFIVIIDADLSHHPKFIPEFIKLQQEGNYDI 123

Query:   125 VTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
             V+GTRY  +GGV GW+  RKL SRGAN L+Q LL P  SDLTGSFRLYKK VLE  I+SC
Sbjct:   124 VSGTRYAGNGGVFGWDFKRKLISRGANFLSQVLLRPNASDLTGSFRLYKKDVLEKCIASC 183

Query:   185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
             VSKGYVFQMEM+VRA + GY I EVPITFVDR++G+SKLGG+EI+++ K LLYL  TT
Sbjct:   184 VSKGYVFQMEMLVRARQHGYTIAEVPITFVDRIYGTSKLGGTEIIQFAKNLLYLFATT 241

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISS

GO:0006486 "protein glycosylation" evidence=ISS

UNIPROTKB|J9NZX5 DPM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
 Identities = 154/237 (64%), Positives = 197/237 (83%)

Query:     8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
             ++KYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT++V +QL+++YG
Sbjct:    24 QDKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYG 83

Query:    66 EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
              D+ILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ E    IV
Sbjct:    84 SDKILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIV 143

Query:   126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
             +GTRY  +GGV+GW+L RK+ SRGAN L Q LL PG SDLTGSFRLY+K VL+ +I  CV
Sbjct:   144 SGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLQKLIEKCV 203

Query:   186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
             SKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct:   204 SKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|A5GFZ5 DPM1 "Dolichol-phosphate mannosyltransferase" [Sus scrofa (taxid:9823)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 152/237 (64%), Positives = 196/237 (82%)

Query:     8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
             ++KYS+++PTYNER N+ LIV+L+ K   +  +++EII++DDGSPDGT+++ +QL ++YG
Sbjct:    23 QDKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDIAEQLVKIYG 82

Query:    66 EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
              D+ILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ E    IV
Sbjct:    83 SDKILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIV 142

Query:   126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
             +GTRY  +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I  CV
Sbjct:   143 SGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCV 202

Query:   186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
             SKGYVFQMEMIVRA +  Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L  TT
Sbjct:   203 SKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 259

GO:0035269 "protein O-linked mannosylation" evidence=ISS

GO:0035268 "protein mannosylation" evidence=ISS

GO:0006506 "GPI anchor biosynthetic process" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0004582 "dolichyl-phosphate beta-D-mannosyltransferase activity" evidence=ISS

GO:0004169 "dolichyl-phosphate-mannose-protein mannosyltransferase activity" evidence=ISS

GO:0033185 "dolichol-phosphate-mannose synthase complex" evidence=IEA

GO:0019348 "dolichol metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q1JQ93	DPM1_BOVIN	2, ., 4, ., 1, ., 8, 3	0.6371	0.9710	0.9038	yes	no
O70152	DPM1_MOUSE	2, ., 4, ., 1, ., 8, 3	0.65	0.9834	0.9153	yes	no
Q54LP3	DPM1_DICDI	2, ., 4, ., 1, ., 8, 3	0.5805	0.9669	0.9212	yes	no
Q9WU83	DPM1_CRIGR	2, ., 4, ., 1, ., 8, 3	0.6582	0.9710	0.8834	yes	no
O60762	DPM1_HUMAN	2, ., 4, ., 1, ., 8, 3	0.6475	1.0	0.9307	yes	no
O14466	DPM1_SCHPO	2, ., 4, ., 1, ., 8, 3	0.6410	0.9586	0.9830	yes	no
Q9VIU7	DPM1_DROME	2, ., 4, ., 1, ., 8, 3	0.6512	0.9752	0.9792	yes	no
A5GFZ5	DPM1_PIG	2, ., 4, ., 1, ., 8, 3	0.6413	0.9710	0.9073	yes	no
P14020	DPM1_YEAST	2, ., 4, ., 1, ., 8, 3	0.3175	0.9132	0.8277	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1.83	0.991
3rd Layer	2.4.1	0.976
4th Layer	2.4.1.80	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	242
PLN02726	243	PLN02726, PLN02726, dolichyl-phosphate beta-D-mann	1e-178
cd06442	224	cd06442, DPM1_like, DPM1_like represents putative	1e-133
cd04179	185	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_l	1e-72
cd04188	211	cd04188, DPG_synthase, DPG_synthase is involved in	2e-42
pfam00535	168	pfam00535, Glycos_transf_2, Glycosyl transferase f	6e-37
cd04187	181	cd04187, DPM1_like_bac, Bacterial DPM1_like enzyme	2e-32
COG0463	291	COG0463, WcaA, Glycosyltransferases involved in ce	4e-24
cd00761	156	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase	2e-21
cd06423	180	cd06423, CESA_like, CESA_like is the cellulose syn	1e-19
cd02525	249	cd02525, Succinoglycan_BP_ExoA, ExoA is involved i	3e-19
pfam13641	229	pfam13641, Glyco_tranf_2_3, Glycosyltransferase li	3e-16
PTZ00260	333	PTZ00260, PTZ00260, dolichyl-phosphate beta-glucos	5e-14
COG1215	439	COG1215, COG1215, Glycosyltransferases, probably i	3e-13
PRK10714	325	PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy	9e-13
PRK11204	420	PRK11204, PRK11204, N-glycosyltransferase; Provisi	3e-12
TIGR04283	220	TIGR04283, glyco_like_mftF, transferase 2, rSAM/se	1e-11
TIGR03937	407	TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glu	5e-11
cd06439	251	cd06439, CESA_like_1, CESA_like_1 is a member of t	3e-10
cd04192	229	cd04192, GT_2_like_e, Subfamily of Glycosyltransfe	4e-10
cd04196	214	cd04196, GT_2_like_d, Subfamily of Glycosyltransfe	5e-10
TIGR04182	293	TIGR04182, glyco_TIGR04182, glycosyltransferase, T	1e-09
cd02522	221	cd02522, GT_2_like_a, GT_2_like_a represents a gly	2e-09
cd04186	166	cd04186, GT_2_like_c, Subfamily of Glycosyltransfe	4e-09
PRK10073	328	PRK10073, PRK10073, putative glycosyl transferase;	5e-09
cd06420	182	cd06420, GT2_Chondriotin_Pol_N, N-terminal domain	6e-09
PRK13915	306	PRK13915, PRK13915, putative glucosyl-3-phosphogly	1e-08
COG1216	305	COG1216, COG1216, Predicted glycosyltransferases [	2e-08
cd06421	234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	3e-08
pfam10111	278	pfam10111, Glyco_tranf_2_2, Glycosyltransferase li	3e-08
cd02511	229	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS	4e-08
cd06434	235	cd06434, GT2_HAS, Hyaluronan synthases catalyze po	8e-07
cd04195	201	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved	4e-06
cd06433	202	cd06433, GT_2_WfgS_like, WfgS and WfeV are involve	5e-06
cd04185	202	cd04185, GT_2_like_b, Subfamily of Glycosyltransfe	8e-06
cd02510	299	cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the fo	3e-05
cd04184	202	cd04184, GT2_RfbC_Mx_like, Myxococcus xanthus RfbC	3e-05
TIGR03469	384	TIGR03469, HpnB, hopene-associated glycosyltransfe	3e-05
TIGR03965	467	TIGR03965, mycofact_glyco, mycofactocin system gly	4e-05
cd06437	232	cd06437, CESA_CaSu_A2, Cellulose synthase catalyti	4e-05
PRK14583	444	PRK14583, hmsR, N-glycosyltransferase; Provisional	7e-05
PRK10063	248	PRK10063, PRK10063, putative glycosyl transferase;	3e-04
TIGR03030	713	TIGR03030, CelA, cellulose synthase catalytic subu	7e-04
pfam13704	97	pfam13704, Glyco_tranf_2_4, Glycosyl transferase f	0.003

>gnl|CDD|215385 PLN02726, PLN02726, dolichyl-phosphate beta-D-mannosyltransferase

 Score =  487 bits (1256), Expect = e-178
 Identities = 209/243 (86%), Positives = 224/243 (92%), Gaps = 1/243 (0%)

Query: 1   MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQEVVKQ 59
           ME   +   KYSII+PTYNERLNIALIVYLIFK L+DV DFEIIVVDDGSPDGTQ+VVKQ
Sbjct: 1   MEAPGEGAMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQ 60

Query: 60  LQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE 119
           LQ++YGEDRILLRPRP KLGLGTAYIHGLKHASG FVVIMDADLSHHPKYLPSFIKKQ E
Sbjct: 61  LQKVYGEDRILLRPRPGKLGLGTAYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRE 120

Query: 120 TGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED 179
           TGA IVTGTRYV+ GGVHGW+L RKLTSRGANVLAQTLLWPGVSDLTGSFRLYK+S LED
Sbjct: 121 TGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALED 180

Query: 180 VISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLL 239
           ++SS VSKGYVFQME+IVRA RKGY IEEVPITFVDRV+G SKLGGSEIV+YLKGLLYLL
Sbjct: 181 LVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGESKLGGSEIVQYLKGLLYLL 240

Query: 240 ITT 242
           +TT
Sbjct: 241 LTT 243

Length = 243

>gnl|CDD|133062 cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1

 Score =  375 bits (965), Expect = e-133
 Identities = 136/226 (60%), Positives = 163/226 (72%), Gaps = 2/226 (0%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR 72
           IIIPTYNER NI  ++  +   L+ +D+EIIVVDD SPDGT E+V++L + Y   R  L 
Sbjct: 1   IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVR--LI 58

Query: 73  PRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVR 132
            RP K GLG+AYI G K A G  +V+MDADLSH P+Y+P  ++ QLE GA +V G+RYV 
Sbjct: 59  VRPGKRGLGSAYIEGFKAARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYVE 118

Query: 133 SGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQ 192
            GGV GW L RKL SRGAN+LA+ LL   VSD T  FR Y++ VLE +I S VSKGY FQ
Sbjct: 119 GGGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFRAYRREVLEKLIDSLVSKGYKFQ 178

Query: 193 MEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL 238
           +E++VRA R GY I EVPITFVDR  G SKLGG EIVEYLKGLL L
Sbjct: 179 LELLVRARRLGYRIVEVPITFVDREHGESKLGGKEIVEYLKGLLRL 224

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily. Length = 224

>gnl|CDD|133022 cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

 Score =  218 bits (559), Expect = 1e-72
 Identities = 80/188 (42%), Positives = 110/188 (58%), Gaps = 4/188 (2%)

Query: 13  IIIPTYNERLNIALIVYLIFKHL-RDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILL 71
           ++IP YNE  NI  +V  +   L    D+EIIVVDDGS DGT E+ ++L       R++ 
Sbjct: 1   VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIR 60

Query: 72  RPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYV 131
             R    G G A   G K A G  VV MDADL H P+ +P  ++K LE GA +V G+R+V
Sbjct: 61  LSR--NFGKGAAVRAGFKAARGDIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGSRFV 118

Query: 132 RSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVF 191
           R GG  G  L+R+L SR  N L + LL   +SD    FRL+++ VLE ++S   S G+ F
Sbjct: 119 R-GGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEALLSLLESNGFEF 177

Query: 192 QMEMIVRA 199
            +E++V A
Sbjct: 178 GLELLVGA 185

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily. Length = 185

>gnl|CDD|133031 cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation

 Score =  142 bits (361), Expect = 2e-42
 Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 9/215 (4%)

Query: 13  IIIPTYNE--RLNIALIVYLIFKHLR-DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
           ++IP YNE  RL   L   + +   R    +EIIVVDDGS DGT EV ++L +       
Sbjct: 1   VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIR 60

Query: 70  LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTR 129
           +L   PK  G G A   G+  A G +++  DADL+   + L    +    +G  I  G+R
Sbjct: 61  VLT-LPKNRGKGGAVRAGMLAARGDYILFADADLATPFEELEKLEEALKTSGYDIAIGSR 119

Query: 130 YVRSG--GVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
              +    V   + +R L  RG N L + LL  G+ D    F+L+ +     +      +
Sbjct: 120 AHLASAAVVKR-SWLRNLLGRGFNFLVRLLLGLGIKDTQCGFKLFTRDAARRLFPRLHLE 178

Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSK 222
            + F +E++V A R GY IEEVP+ +V+     SK
Sbjct: 179 RWAFDVELLVLARRLGYPIEEVPVRWVE--IPGSK 211

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. Length = 211

>gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2

 Score =  127 bits (321), Expect = 6e-37
 Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 4/170 (2%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILL 71
           S+IIPTYNE   +   +  +       +FEIIVVDDGS DGT E+ ++  +     R+ +
Sbjct: 1   SVIIPTYNEEKYLEETLESLLNQTYK-NFEIIVVDDGSTDGTVEIAEEYAKND--PRVRV 57

Query: 72  RPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYV 131
               + LG   A   GLK A+G ++  +DAD    P +L   ++   + GA IV G+R V
Sbjct: 58  IRLEENLGKAAARNAGLKLATGDYIAFLDADDEVAPDWLEKLVELLEKNGADIVIGSRVV 117

Query: 132 RSGGV-HGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
            +G        +R         L    L   V  L GS  LY++ VLE++
Sbjct: 118 INGETRLYGRALRFELLLLLGKLGARSLGLKVLFLIGSNALYRREVLEEL 167

Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168

>gnl|CDD|133030 cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1

 Score =  116 bits (292), Expect = 2e-32
 Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 12/173 (6%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDR-I 69
           I++P YNE  N+  +   +   L     D+EII VDDGS D T E++++L       + I
Sbjct: 1   IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVI 60

Query: 70  LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTR 129
            L    +  G   A + GL HA G  V+ MDADL   P+ +P  + K  E G  +V G R
Sbjct: 61  RLS---RNFGQQAALLAGLDHARGDAVITMDADLQDPPELIPEMLAK-WEEGYDVVYGVR 116

Query: 130 YVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVIS 182
             R         +++LTS+    L   L    + D  G FRL  + V++ ++ 
Sbjct: 117 KNRKES-----WLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDALLL 164

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily. Length = 181

>gnl|CDD|223539 COG0463, WcaA, Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

 Score = 97.5 bits (241), Expect = 4e-24
 Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 14/217 (6%)

Query: 7   NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
              K S++IPTYNE   +   +  +       DFEIIVVDDGS DGT E+  +       
Sbjct: 1   MMPKVSVVIPTYNEEEYLPEALESLLNQTYK-DFEIIVVDDGSTDGTTEIAIEYGAKDV- 58

Query: 67  DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126
            R++     +  GLG A   GL++A G ++V +DAD  H P+ +P      +  G     
Sbjct: 59  -RVIRLINERNGGLGAARNAGLEYARGDYIVFLDADDQHPPELIP-----LVAAGGDGDY 112

Query: 127 GTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVS 186
             R      +     +     +        +L P   D  G  RL  +  ++ + +    
Sbjct: 113 IARLDDRDDIWLPRKLLSKLVKLLGNRLLGVLIP---DGFGDLRLLVRDAVDGLRA--FL 167

Query: 187 KGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKL 223
           +G    + +++R        E +    + R+ G+SK 
Sbjct: 168 EGRSRFLRLLLRK-LVLIRREVLEYLLLYRLLGASKR 203

Length = 291

>gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

 Score = 87.2 bits (216), Expect = 2e-21
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 4/117 (3%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR 72
           +IIP YNE   +   +  +       +FE+IVVDDGS DGT E++++  +     R++  
Sbjct: 1   VIIPAYNEEPYLERCLESLLAQTYP-NFEVIVVDDGSTDGTLEILEEYAKKD--PRVIRV 57

Query: 73  PRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKK-QLETGASIVTGT 128
              +  GL  A   GLK A G +++ +DAD    P +L   + +   +  A  V G 
Sbjct: 58  INEENQGLAAARNAGLKAARGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP 114

Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Length = 156

>gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily

 Score = 82.7 bits (205), Expect = 1e-19
 Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 13/175 (7%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLRDVD---FEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
           II+P YNE   I   +    + L  +D    E+IVVDDGS D T E++++L  LY    +
Sbjct: 1   IIVPAYNEEAVIERTI----ESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVL 56

Query: 70  LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGT 128
           ++R +    G   A   GL+HA G  VV++DAD    P  L   +           V G 
Sbjct: 57  VVRDKENG-GKAGALNAGLRHAKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGR 115

Query: 129 RYVRSGGVHGWNLMRKL---TSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
             VR+G  +    ++ +   +       AQ+ L  GV  L+G+F  +++  L +V
Sbjct: 116 VRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALG-GVLVLSGAFGAFRREALREV 169

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. Length = 180

>gnl|CDD|133016 cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan

 Score = 83.0 bits (206), Expect = 3e-19
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)

Query: 12  SIIIPTYNERLNI-ALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRIL 70
           SIIIP  NE   I  L+  L+ +       EIIVVD GS DGT+E+V++        RI 
Sbjct: 3   SIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKD--PRIR 60

Query: 71  LRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPK-YLPSFIKKQLETGASIVTGTR 129
           L   PK++        G++++ G  ++ +DA  + +PK Y+   ++    TGA  V G  
Sbjct: 61  LIDNPKRI-QSAGLNIGIRNSRGDIIIRVDAH-AVYPKDYILELVEALKRTGADNVGGPM 118

Query: 130 YVRSGGVHGWNLMRKLTSRGANVLA---QTLLWPGVSDLTGSFRLYKKSVLEDV 180
                      +    +S   +  +      +  G  D T     Y++ V E V
Sbjct: 119 ETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVD-TVHHGAYRREVFEKV 171

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. Length = 249

>gnl|CDD|222281 pfam13641, Glyco_tranf_2_3, Glycosyltransferase like family 2

 Score = 74.7 bits (184), Expect = 3e-16
 Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 28/227 (12%)

Query: 10  KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
           + ++++PT+NE     ++   +   L       E+IVV DGS D T +V ++L   Y + 
Sbjct: 2   RVAVVVPTWNED---KVLGRTLRSILAQDYPRLEVIVVVDGSDDETLDVARELAAAYPDV 58

Query: 68  RILLRPRPKKLGLGT---AYIHGLKHASGSFVVIMDADLSHHP----KYLPSFIKKQLET 120
           R+ +  RP+  G      A    L+      VV++DAD    P    + LP F+ K    
Sbjct: 59  RVHVVRRPRPPGPTGKARALNEALRAIKSDLVVLLDADSVVDPDTLRRLLPFFLSK---- 114

Query: 121 GASIVTGTRYVRSGG--VHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLE 178
           G   V G  +V +    V     +         +  +  L  GV+ L GS  L+++SVLE
Sbjct: 115 GVGAVQGPVFVLNLRTAVAPLYALEFALRHLRFMALRRAL--GVAPLAGSGSLFRRSVLE 172

Query: 179 DVIS----SCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSS 221
           ++        + +      E+ +R  R G+    VP   V  +  SS
Sbjct: 173 EIGGFDPGFLLGEDK----ELGLRLRRAGWRTAYVPGAAVYELSPSS 215

Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Length = 229

>gnl|CDD|240336 PTZ00260, PTZ00260, dolichyl-phosphate beta-glucosyltransferase; Provisional

 Score = 69.8 bits (171), Expect = 5e-14
 Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 15/223 (6%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRD-------VDFEIIVVDDGSPDGTQEVVKQLQQLY 64
           SI+IP YNE   +  ++    K+L           +EII+V+DGS D T +V K   +  
Sbjct: 73  SIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQN 132

Query: 65  GEDRILLR--PRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL---E 119
               I +R     +  G G A   G+  + G +++++DAD +             L   +
Sbjct: 133 INPNIDIRLLSLLRNKGKGGAVRIGMLASRGKYILMVDADGATDIDDFDKLEDIMLKIEQ 192

Query: 120 TGASIVTGTR--YVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVL 177
            G  IV G+R   V S  V      R +   G + +  T+    + D    F+L+ +   
Sbjct: 193 NGLGIVFGSRNHLVDSDVVAKRKWYRNILMYGFHFIVNTICGTNLKDTQCGFKLFTRETA 252

Query: 178 EDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGS 220
             +  S   + + F +E+++ A +    I EVP+ + + V GS
Sbjct: 253 RIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNWTE-VEGS 294

Length = 333

>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

 Score = 68.0 bits (166), Expect = 3e-13
 Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 3   ETNKNKNKYSIIIPTYNERL-NIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQ 61
           + +K   K S+IIP YNE    +   +  +        +E+IVVDDGS D T E++++L 
Sbjct: 48  DADKLLPKVSVIIPAYNEEPEVLEETLESLLS-QDYPRYEVIVVDDGSTDETYEILEELG 106

Query: 62  QLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETG 121
             YG +  ++ P  K  G   A  +GLK A G  VVI+DAD    P  L   +    +  
Sbjct: 107 AEYGPNFRVIYPEKKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALRELVSPFEDPP 166

Query: 122 ASIVTGTRYVRSGGVHGWNLMR------KLTSRGANVLAQTLLWPGVSDLTGSFRLYKKS 175
              V GT  +R+       L R                A          L+GS   +++S
Sbjct: 167 VGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISF--LSGSSSAFRRS 224

Query: 176 VLEDV 180
            LE+V
Sbjct: 225 ALEEV 229

Length = 439

>gnl|CDD|182669 PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

 Score = 66.3 bits (162), Expect = 9e-13
 Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 18/238 (7%)

Query: 9   NKYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
            K S++IP YNE+ ++  ++         +  ++EI+++DDGS D + E++ +  Q    
Sbjct: 6   KKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAPDS 65

Query: 67  D--RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
               ILL    +  G  +A + G  H +G  ++ +DADL + P+ +P  + K  + G  +
Sbjct: 66  HIVAILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKA-DEGYDV 121

Query: 125 VTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
           V   R  R       +  RK  S+  N L Q      + D     R Y++ ++ D +  C
Sbjct: 122 VGTVRQNRQD-----SWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHC 175

Query: 185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
             +     +     A R      E+P+   +R FG SK     ++  +  L+  L TT
Sbjct: 176 HERSTFIPILANTFARRA----IEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 229

Length = 325

>gnl|CDD|236882 PRK11204, PRK11204, N-glycosyltransferase; Provisional

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 12  SIIIPTYNERLNIA-LIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRIL 70
           SI++P YNE  N+   I +L+   LR  ++E+I ++DGS D T E++ +L       R+ 
Sbjct: 57  SILVPCYNEGENVEETISHLL--ALRYPNYEVIAINDGSSDNTGEILDRLAAQI--PRLR 112

Query: 71  LRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD--LSHH-PKYLPSFIKKQLETGASIVTG 127
           +    +  G   A   G   A   ++V +D D  L      Y+          GA  VTG
Sbjct: 113 VIHLAENQGKANALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGA--VTG 170

Query: 128 TRYVR 132
              +R
Sbjct: 171 NPRIR 175

Length = 420

>gnl|CDD|234532 TIGR04283, glyco_like_mftF, transferase 2, rSAM/selenodomain-associated

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 19/95 (20%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
           SIIIP  NE   +  +       L+ +  D E+IVVD GS DGT E+ + L       ++
Sbjct: 2   SIIIPVLNEAATLPEL----LADLQALPGDAEVIVVDGGSTDGTVEIARSL-----GAKV 52

Query: 70  LLRPRPKKLGLGTAY--IHGLKHASGSFVVIMDAD 102
           +  P+      G A     G   A G  ++ + AD
Sbjct: 53  IHSPK------GRARQMNAGAALAKGDILLFLHAD 81

This enzyme may transfer a nucleotide, or it sugar moiety, as part of a biosynthetic pathway. Other proposed members of the pathway include another transferase (TIGR04282), a phosphoesterase, and a radical SAM enzyme (TIGR04167) whose C-terminal domain (pfam12345) frequently contains a selenocysteine [Unknown function, Enzymes of unknown specificity]. Length = 220

>gnl|CDD|188452 TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glucosamine synthase

 Score = 61.5 bits (150), Expect = 5e-11
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 12  SIIIPTYNERLNIA-LIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRIL 70
           SI++P YNE  N+   I +L+   LR  +FEII ++DGS D T E++ +L       R+ 
Sbjct: 48  SILVPCYNEGANVEETISHLL--ALRYPNFEIIAINDGSKDNTAEILDRLAAQD--PRLR 103

Query: 71  LRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD--LSHH-PKYLPSFIKKQLETGASIVTG 127
           +    +  G   A   GL  A   ++V +D D  L      ++          GA  VTG
Sbjct: 104 VIHLAENQGKANALNTGLLAAKYEYLVCIDGDALLDPDAAYWMVEHFLSNPRVGA--VTG 161

Query: 128 TRYVR 132
              +R
Sbjct: 162 NPRIR 166

Members of this protein family are biofilm-forming enzymes that polymerize N-acetyl-D-glucosamine residues in beta(1,6) linkage. One named members is IcaA (intercellular adhesin protein A), an enzyme that acts (with aid of subunit IcaD) in Polysaccharide Intercellular Adhesin (PIA) biosynthesis in Staphylococcus epidermis). The homologous member in E. coli is designated PgaC. Members are often encoded next to a polysaccharide deacetylase and involved in biofilm formation. Note that chitin, although also made from N-acetylglucosamine, is formed with beta-1,4 linkages. Length = 407

>gnl|CDD|133061 cd06439, CESA_like_1, CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 19/101 (18%)

Query: 10  KYSIIIPTYNERLNIALIVYLIFKHLRDV--------DFEIIVVDDGSPDGTQEVVKQLQ 61
             +IIIP YNE   I          L ++          EIIVV DGS DGT E+ ++  
Sbjct: 30  TVTIIIPAYNEEAVIE-------AKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE-- 80

Query: 62  QLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD 102
             Y +  + L   P++ G   A    L  A+G  VV  DA+
Sbjct: 81  --YADKGVKLLRFPERRGKAAALNRALALATGEIVVFTDAN 119

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Length = 251

>gnl|CDD|133035 cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 13  IIIPTYNERLNIALIVYLIFK-HLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDR--- 68
           ++I   NE  N+  ++  +         FE+I+VDD S DGT ++   L+    +     
Sbjct: 1   VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQI---LEFAAAKPNFQL 57

Query: 69  ILLRPR-----PKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGAS 123
            +L         KK  L TA    +K A G ++V  DAD      +L +F+    +    
Sbjct: 58  KILNNSRVSISGKKNALTTA----IKAAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIG 113

Query: 124 IVTG-TRYVRSGG 135
           +V G   Y +   
Sbjct: 114 LVAGPVIYFKGKS 126

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 229

>gnl|CDD|133039 cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 16/98 (16%)

Query: 12  SIIIPTYN-ERLNIALIVYL------IFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY 64
           ++++ TYN E+       YL      I       + E+I+ DDGS DGT E++K+     
Sbjct: 1   AVLMATYNGEK-------YLREQLDSILAQT-YKNDELIISDDGSTDGTVEIIKEYIDKD 52

Query: 65  GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD 102
               IL+R   K LG+   +   L+ A G +V   D D
Sbjct: 53  PFIIILIRN-GKNLGVARNFESLLQAADGDYVFFCDQD 89

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 214

>gnl|CDD|200433 TIGR04182, glyco_TIGR04182, glycosyltransferase, TIGR04182 family

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 20/211 (9%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLRDVDFE-IIVVDDGSPDGTQEVVKQLQQLYGEDRILL 71
           ++IPT NE   I  ++       +++ +  I+V+D  S DGTQE+ K+        R+++
Sbjct: 4   VLIPTLNEAATIGDVI----DGFQELGYSDILVIDGNSTDGTQEIAKEAGA-----RVVI 54

Query: 72  RPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYV 131
           +      G G A     +     +V+++D D ++ P    + ++  L   A  V G R+ 
Sbjct: 55  Q---SGKGKGQAVREAFELIDAPYVLMLDGDGTYLPADADALLEPLLSGRADHVIGNRFA 111

Query: 132 --RSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY 189
               G     NL   + +R  N L + +    + D+   +R + +  +  +  +    G+
Sbjct: 112 DMEPGAFTRLNL---VGNRLINRLFRIIHGVDLRDILSGYRAFTRESIRRMELT--ETGF 166

Query: 190 VFQMEMIVRACRKGYHIEEVPITFVDRVFGS 220
             + E+ V   +K   +E VPIT+  R  GS
Sbjct: 167 EIETEIAVECVKKNLRVEVVPITYRARPGGS 197

Members of this family are glycosyltransferases restricted to the archaea. All but two members are from species with the PGF-CTERM/archaeosortase A system, a proposed maturation system for exported, glycosylated proteins as are found often in S-layers. Length = 293

>gnl|CDD|133013 cd02522, GT_2_like_a, GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 11 YSIIIPTYNERLNIA-LIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQL 60
           SIIIPT NE  N+  L+  L  + L  +  EIIVVD GS DGT  + +  
Sbjct: 1  LSIIIPTLNEAENLPRLLASL--RRLNPLPLEIIVVDGGSTDGTVAIARSA 49

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 221

>gnl|CDD|133029 cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR 72
           III  YN    +   +  +       DFE+IVVD+ S DG+ E++++L      +  L+R
Sbjct: 1   IIIVNYNSLEYLKACLDSLLAQTYP-DFEVIVVDNASTDGSVELLRELFP----EVRLIR 55

Query: 73  PRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPS---FIKKQLETGA--SIVTG 127
              + LG G     G++ A G +V++++ D    P  L       ++  + G     V+G
Sbjct: 56  N-GENLGFGAGNNQGIREAKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPKVSG 114

Query: 128 T 128
            
Sbjct: 115 A 115

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 166

>gnl|CDD|182223 PRK10073, PRK10073, putative glycosyl transferase; Provisional

 Score = 55.1 bits (133), Expect = 5e-09
 Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 11/148 (7%)

Query: 7   NKNKYSIIIPTYN-ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           +  K SIIIP YN  +   A +  LI +       EII+V+DGS D + E+ K   + Y 
Sbjct: 4   STPKLSIIIPLYNAGKDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKHYAENYP 61

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
             R+L +      G+  A   GL  A+G +V   DAD   +P    + +   LE    + 
Sbjct: 62  HVRLLHQANA---GVSVARNTGLAVATGKYVAFPDADDVVYPTMYETLMTMALEDDLDVA 118

Query: 126 T--GTRYVRSGGVHGWNLM--RKLTSRG 149
                   R  G   W  +   +L S G
Sbjct: 119 QCNADWCFRDTG-ETWQSIPSDRLRSTG 145

Length = 328

>gnl|CDD|133042 cd06420, GT2_Chondriotin_Pol_N, N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

 Score = 53.7 bits (130), Expect = 6e-09
 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 42/154 (27%)

Query: 13  IIIPTYN--ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQ--------LQQ 62
           +II TYN  E L + L   L   +   + FE+I+ DDGS + T+E++++        ++ 
Sbjct: 1   LIITTYNRPEALELVLKSVL---NQSILPFEVIIADDGSTEETKELIEEFKSQFPIPIKH 57

Query: 63  LYGEDRILLRPRPKKLGLGTAYI--HGLKHASGSFVVIMDADLSHHPKYLPSFIK---KQ 117
           ++ ED           G   A I    +  A G +++ +D D   HP     FI    + 
Sbjct: 58  VWQED----------EGFRKAKIRNKAIAAAKGDYLIFIDGDCIPHPD----FIADHIEL 103

Query: 118 LETGASIVTGTRYVRSGGVHGWNLMRKLTSRGAN 151
            E G   ++G+R           L  KLT RG  
Sbjct: 104 AEPG-VFLSGSRV---------LLNEKLTERGIR 127

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix. Length = 182

>gnl|CDD|237556 PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 6   KNKNKYSIIIPTYNERLNIALIVYLIFKHL--RDVDFEIIVVDDGSPDGTQEVVKQL-QQ 62
           K     S+++P  NE   +  +V  I   L    VD E+IV+D GS D T E       +
Sbjct: 28  KAGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVD-ELIVIDSGSTDATAERAAAAGAR 86

Query: 63  LYGEDRIL--LRPRPKKLGLGTAYIHGLKHASGSFVVIMDADL-SHHPKYLP 111
           +   + IL  L PRP K   G A    L   +G  VV +DADL +  P ++P
Sbjct: 87  VVSREEILPELPPRPGK---GEALWRSLAATTGDIVVFVDADLINFDPMFVP 135

Length = 306

>gnl|CDD|224137 COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 20/183 (10%)

Query: 12  SIIIPTYNERLNIALIVYLI-FKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRIL 70
           SIII TYN      L+  L         D  I+VVD+GS DG+ E +K          + 
Sbjct: 6   SIIIVTYNRG--EDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKA----RFFPNVR 59

Query: 71  LRPRPKKLGLGTAYIHGLKHASG---SFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
           L    + LG    +  G+K+A      +V++++ D    P  L   +K   E  A+ V G
Sbjct: 60  LIENGENLGFAGGFNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVG 119

Query: 128 TR----------YVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVL 177
                         R G   G     + +         +     V+ L+G+  L ++   
Sbjct: 120 PLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVASLSGACLLIRREAF 179

Query: 178 EDV 180
           E V
Sbjct: 180 EKV 182

Length = 305

>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 14/105 (13%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLRDVD-----FEIIVVDDGSPDGTQEVVKQLQQLYGED 67
           + IPTYNE L I   V    +    +D       + V+DDG     + +  +L   YG  
Sbjct: 5   VFIPTYNEPLEI---VRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGY- 60

Query: 68  RILLRPRP--KKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYL 110
           R L RP     K G      + L H +G FV I+DAD    P +L
Sbjct: 61  RYLTRPDNRHAKAG---NLNNALAHTTGDFVAILDADHVPTPDFL 102

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. Length = 234

>gnl|CDD|220577 pfam10111, Glyco_tranf_2_2, Glycosyltransferase like family 2

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 7/115 (6%)

Query: 12  SIIIPTYNERLN------IALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           S+IIP Y           +   +  +   L D D EIIVVD  SP    + +K++    G
Sbjct: 1   SVIIPVYLSLRTRDILKRLQSCLNRLSYFLSDPDVEIIVVDGDSPLSFAKELKKIIAKNG 60

Query: 66  EDRILLRPRPKKL-GLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE 119
               +     K L     A   G +++S  F+  +D D    P  L   IK   E
Sbjct: 61  AINYISHKTHKDLFSPAKARNRGAEYSSSDFIFFLDVDCLISPDTLEKIIKHFQE 115

Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Length = 278

>gnl|CDD|133005 cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 18/94 (19%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDVDF---EIIVVDDGSPDGTQEVVKQLQQLYGEDR 68
           S++I T NE  NI        + L  V +   EIIVVD GS D T E+ K+    YG  +
Sbjct: 3   SVVIITKNEERNIE-------RCLESVKWAVDEIIVVDSGSTDRTVEIAKE----YG-AK 50

Query: 69  ILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD 102
           +  R      G G      L+ A+  +V+ +DAD
Sbjct: 51  VYQRW---WDGFGAQRNFALELATNDWVLSLDAD 81

UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core. Length = 229

>gnl|CDD|133056 cd06434, GT2_HAS, Hyaluronan synthases catalyze polymerization of hyaluronan

 Score = 48.0 bits (115), Expect = 8e-07
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 22/179 (12%)

Query: 12  SIIIPTYNERLNIALIVYLIFKH-----LRDVDFEIIVVDDGSPDGTQEVVKQLQQL--Y 64
           ++IIP Y+E  ++       F+      LR    EIIVV DG     +  +  L Q   Y
Sbjct: 3   TVIIPVYDEDPDV-------FRECLRSILRQKPLEIIVVTDGD---DEPYLSILSQTVKY 52

Query: 65  GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
           G   ++  P P K     A   G++H +   VV++D+D    P  LP  +K   +     
Sbjct: 53  GGIFVITVPHPGKRR---ALAEGIRHVTTDIVVLLDSDTVWPPNALPEMLKPFEDPKVGG 109

Query: 125 VTGTRYVRSGGVHGWNLM--RKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVI 181
           V   + +       W+ +    L  R   + A      GV  L+G    Y+  +L+D +
Sbjct: 110 VGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFL 168

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate. Length = 235

>gnl|CDD|133038 cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 41  EIIVVDDGS-PDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIM 99
           E+++V DG       EV+++ ++      + L    K  GLG A   GLKH +  +V  M
Sbjct: 31  EVVLVKDGPVTQSLNEVLEEFKRKLPLKVVPL---EKNRGLGKALNEGLKHCTYDWVARM 87

Query: 100 DADLSHHP----KYLPSFIK 115
           D D    P    K L    K
Sbjct: 88  DTDDISLPDRFEKQLDFIEK 107

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Length = 201

>gnl|CDD|133055 cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis

 Score = 45.6 bits (109), Expect = 5e-06
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 12/128 (9%)

Query: 12  SIIIPTYNERLNIALIVYLI--FKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
           SII PTYN       +   I         + E IV+D GS DGT +++K+    Y +   
Sbjct: 1   SIITPTYN---QAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKK----YEDKIT 53

Query: 70  LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTG- 127
                P K G+  A   G+  A+G  +  +++D +  P  L + +    E     +V G 
Sbjct: 54  YWISEPDK-GIYDAMNKGIALATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGD 112

Query: 128 TRYVRSGG 135
              V   G
Sbjct: 113 VLLVDENG 120

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 202

>gnl|CDD|133028 cd04185, GT_2_like_b, Subfamily of Glycosyltransferase Family GT2 of unknown function

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 15/124 (12%)

Query: 14  IIPTYNERLNIALIVYLIFKHLRDVDF---EIIVVDDGSPDGTQEVVKQLQQLYGEDRIL 70
           ++ TYN RL++          L         IIV+D+ S DGT E    L  L   D I+
Sbjct: 2   VVVTYN-RLDLLKEC---LDALLAQTRPPDHIIVIDNASTDGTAEW---LTSLGDLDNIV 54

Query: 71  LRPRPKKLGLGTAYIH-GLKHASGS---FVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126
               P+ LG G    + G++ A      ++ +MD D    P  L   +    +     + 
Sbjct: 55  YLRLPENLG-GAGGFYEGVRRAYELGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLA 113

Query: 127 GTRY 130
               
Sbjct: 114 PLVL 117

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 202

>gnl|CDD|133004 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 12  SIIIPTYNERLNIAL-IVYLIF-----KHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           S+II  +NE L+  L  V+ +      + L+    EII+VDD S     +++ +      
Sbjct: 1   SVIIIFHNEALSTLLRTVHSVINRTPPELLK----EIILVDDFSDKPELKLLLEEYYKKY 56

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDA 101
             ++ +    K+ GL  A I G + A+G  +V +D+
Sbjct: 57  LPKVKVLRLKKREGLIRARIAGARAATGDVLVFLDS 92

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Length = 299

>gnl|CDD|133027 cd04184, GT2_RfbC_Mx_like, Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDV------DFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           SI++P YN         YL  + +  V      ++E+ + DD S D   EV + L++   
Sbjct: 4   SIVMPVYN-----TPEKYLR-EAIESVRAQTYPNWELCIADDASTDP--EVKRVLKKYAA 55

Query: 66  ED-RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD 102
           +D RI +  R +  G+  A    L+ A+G FV ++D D
Sbjct: 56  QDPRIKVVFREENGGISAATNSALELATGEFVALLDHD 93

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Length = 202

>gnl|CDD|213815 TIGR03469, HpnB, hopene-associated glycosyltransferase HpnB

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 16/127 (12%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE-DRILL 71
            ++P  NE   I   V  + +        +I+VDD S DGT ++ +   + YG  DR+ +
Sbjct: 44  AVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTV 103

Query: 72  ---RPRPK----KL-----GLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE 119
              +P P     KL     G+  A           ++++ DAD++H P  L   + +   
Sbjct: 104 VSGQPLPPGWSGKLWAVSQGIAAA---RTLAPPADYLLLTDADIAHGPDNLARLVARARA 160

Query: 120 TGASIVT 126
            G  +V+
Sbjct: 161 EGLDLVS 167

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms. Length = 384

>gnl|CDD|234419 TIGR03965, mycofact_glyco, mycofactocin system glycosyltransferase

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 12  SIIIPTYN--ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
           ++++P  N    L   L   L   + RD   E+IVVDDGS D       +  +L    R+
Sbjct: 77  TVVVPVRNRPAGLARLLAALLALDYPRD-RLEVIVVDDGSEDPVPTRAARGARL--PVRV 133

Query: 70  LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPS 112
           +  PR    G   A   G + A   FV   D+D+   P +L +
Sbjct: 134 IRHPRR--QGPAAARNAGARAARTEFVAFTDSDVVPRPGWLRA 174

Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin. Length = 467

>gnl|CDD|133059 cd06437, CESA_CaSu_A2, Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 11/106 (10%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDVDF-----EIIVVDDGSPDGTQEVVKQLQQLYGE 66
           ++ +P +NE+  +  ++         +D+     EI V+DD + +  +   + +++   +
Sbjct: 4   TVQLPVFNEKYVVERLIEAA----CALDYPKDRLEIQVLDDSTDETVRLAREIVEEYAAQ 59

Query: 67  D-RILLRPRPKKLGL-GTAYIHGLKHASGSFVVIMDADLSHHPKYL 110
              I    R  + G    A   G+K A G +V I DAD    P +L
Sbjct: 60  GVNIKHVRRADRTGYKAGALAEGMKVAKGEYVAIFDADFVPPPDFL 105

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal. Length = 232

>gnl|CDD|184755 PRK14583, hmsR, N-glycosyltransferase; Provisional

 Score = 43.0 bits (101), Expect = 7e-05
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILL 71
           SI++P +NE LN    ++         + E+I ++DGS D T +V+  L       R++ 
Sbjct: 78  SILVPCFNEGLNARETIHAALAQ-TYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIH 136

Query: 72  RPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE---TGASIVTGT 128
               +  G   A   G   A   ++V +D D       +P  +   +    TGA  VTG 
Sbjct: 137 LAHNQ--GKAIALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGA--VTGN 192

Query: 129 RYVRS 133
             +R+
Sbjct: 193 PRIRT 197

Length = 444

>gnl|CDD|182218 PRK10063, PRK10063, putative glycosyl transferase; Provisional

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 37  DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFV 96
            + FE IVVD GS DGT+E    L+ L G   +     P   G+  A   G+  A G F 
Sbjct: 31  GISFEWIVVDGGSNDGTREF---LENLNGIFNLRFVSEPDN-GIYDAMNKGIAMAQGRFA 86

Query: 97  VIMDA-DLSH 105
           + +++ D+ H
Sbjct: 87  LFLNSGDIFH 96

Length = 248

>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)

 Score = 40.0 bits (94), Expect = 7e-04
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 26/114 (22%)

Query: 13  IIIPTYNERLNI-ALIVY----LIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
           + IPTYNE L I A  V     + +   +   F + ++DDG  D  +      Q    + 
Sbjct: 135 VFIPTYNEDLEIVATTVLAAKNMDYPADK---FRVWILDDGGTDQKRNDPDPEQAEAAQR 191

Query: 68  RILLRPRPKKLGLGTAYI--------------HGLKHASGSFVVIMDADLSHHP 107
           R  L+   +KLG+   YI              + LKH  G  ++I DAD  H P
Sbjct: 192 REELKEFCRKLGVN--YITRPRNVHAKAGNINNALKHTDGELILIFDAD--HVP 241

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. Length = 713

>gnl|CDD|222329 pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2

 Score = 35.6 bits (83), Expect = 0.003
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 10/74 (13%)

Query: 34  HLRDVDFE-IIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR--PKKLGLGTAYIHGL-- 88
           H R + F+  ++VD+ S DGT E++  L      D  ++R     +       +++ L  
Sbjct: 13  HHRALGFDHFLIVDNDSDDGTAEILAAL-----PDVGVIRTDLSYRDARRQVDWLNALIR 67

Query: 89  KHASGSFVVIMDAD 102
           ++A G +V+++DAD
Sbjct: 68  RYADGDWVLVLDAD 81

Members of this family of prokaryotic proteins include putative glucosyltransferases,. Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	242
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	100.0
KOG2978	238	consensus Dolichol-phosphate mannosyltransferase [	100.0
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	100.0
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	100.0
PTZ00260	333	dolichyl-phosphate beta-glucosyltransferase; Provi	100.0
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	100.0
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	100.0
cd06437	232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	100.0
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	100.0
PRK11204	420	N-glycosyltransferase; Provisional	100.0
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	100.0
PRK14583	444	hmsR N-glycosyltransferase; Provisional	100.0
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	100.0
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	100.0
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	100.0
cd06913	219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	100.0
PRK10073	328	putative glycosyl transferase; Provisional	100.0
PRK10714	325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	100.0
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	100.0
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	100.0
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	100.0
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	99.98
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	99.98
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	99.98
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	99.97
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	99.97
PRK10063	248	putative glycosyl transferase; Provisional	99.97
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	99.97
PRK11498	852	bcsA cellulose synthase catalytic subunit; Provisi	99.97
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	99.97
COG1216	305	Predicted glycosyltransferases [General function p	99.97
PRK10018	279	putative glycosyl transferase; Provisional	99.97
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	99.97
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	99.97
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	99.97
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	99.97
cd02522	221	GT_2_like_a GT_2_like_a represents a glycosyltrans	99.97
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	99.96
PRK13915	306	putative glucosyl-3-phosphoglycerate synthase; Pro	99.96
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	99.96
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	99.96
COG1215	439	Glycosyltransferases, probably involved in cell wa	99.96
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	99.96
PRK14716	504	bacteriophage N4 adsorption protein B; Provisional	99.95
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	99.95
PF10111	281	Glyco_tranf_2_2: Glycosyltransferase like family 2	99.95
cd06438	183	EpsO_like EpsO protein participates in the methano	99.94
cd04191	254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	99.94
cd04190	244	Chitin_synth_C C-terminal domain of Chitin Synthas	99.94
cd06436	191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	99.93
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	99.92
KOG2977	323	consensus Glycosyltransferase [General function pr	99.91
PRK05454	691	glucosyltransferase MdoH; Provisional	99.91
PRK11234	727	nfrB bacteriophage N4 adsorption protein B; Provis	99.9
PRK15489	703	nfrB bacteriophage N4 adsorption protein B; Provis	99.86
cd02511	229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	99.84
cd00761	156	Glyco_tranf_GTA_type Glycosyltransferase family A	99.83
COG0463	291	WcaA Glycosyltransferases involved in cell wall bi	99.79
KOG3738	559	consensus Predicted polypeptide N-acetylgalactosam	99.72
KOG3736	578	consensus Polypeptide N-acetylgalactosaminyltransf	99.71
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	99.69
KOG3737	603	consensus Predicted polypeptide N-acetylgalactosam	99.68
KOG2547	431	consensus Ceramide glucosyltransferase [Lipid tran	99.6
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	99.54
PF13712	217	Glyco_tranf_2_5: Glycosyltransferase like family;	99.52
cd02514	334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	99.49
cd00899	219	b4GalT Beta-4-Galactosyltransferase is involved in	99.08
PF03142	527	Chitin_synth_2: Chitin synthase; InterPro: IPR0048	99.03
PLN02893	734	Cellulose synthase-like protein	98.95
COG4092	346	Predicted glycosyltransferase involved in capsule	98.85
COG2943	736	MdoH Membrane glycosyltransferase [Cell envelope b	98.81
PF05679	499	CHGN: Chondroitin N-acetylgalactosaminyltransferas	98.56
PF13704	97	Glyco_tranf_2_4: Glycosyl transferase family 2	98.54
PF03071	434	GNT-I: GNT-I family; InterPro: IPR004139 The biosy	98.54
PF03452	269	Anp1: Anp1; InterPro: IPR005109 The members of thi	98.43
KOG3588	494	consensus Chondroitin synthase 1 [Carbohydrate tra	98.37
KOG3916	372	consensus UDP-Gal:glucosylceramide beta-1,4-galact	98.25
KOG2571	862	consensus Chitin synthase/hyaluronan synthase (gly	98.04
PF11735	241	CAP59_mtransfer: Cryptococcal mannosyltransferase	97.98
PLN02189	1040	cellulose synthase	97.93
cd00218	223	GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I)	97.91
PLN02458	346	transferase, transferring glycosyl groups	97.84
TIGR02460	381	osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	97.79
PRK14503	393	mannosyl-3-phosphoglycerate synthase; Provisional	97.73
PF11397	343	GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IP	97.67
KOG1476	330	consensus Beta-1,3-glucuronyltransferase B3GAT1/SQ	97.65
PF03214	348	RGP: Reversibly glycosylated polypeptide; InterPro	97.65
PLN02638	1079	cellulose synthase A (UDP-forming), catalytic subu	97.62
PF09488	381	Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas	97.45
PF02709	78	Glyco_transf_7C: N-terminal domain of galactosyltr	97.41
PLN02195	977	cellulose synthase A	97.38
PF06306	347	CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (	97.28
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	97.2
PLN02248	1135	cellulose synthase-like protein	97.17
PF04666	297	Glyco_transf_54: N-Acetylglucosaminyltransferase-I	97.09
PLN03180	346	reversibly glycosylated polypeptide; Provisional	96.93
PF12804	160	NTP_transf_3: MobA-like NTP transferase domain; PD	96.89
PLN02917	293	CMP-KDO synthetase	96.88
PF13733	136	Glyco_transf_7N: N-terminal region of glycosyl tra	96.82
PF11316	234	Rhamno_transf: Putative rhamnosyl transferase ; In	96.81
cd02540	229	GT2_GlmU_N_bac N-terminal domain of bacterial GlmU	96.81
KOG1413	411	consensus N-acetylglucosaminyltransferase I [Carbo	96.8
cd02508	200	ADP_Glucose_PP ADP-glucose pyrophosphorylase is in	96.72
COG1209	286	RfbA dTDP-glucose pyrophosphorylase [Cell envelope	96.72
PF05060	356	MGAT2: N-acetylglucosaminyltransferase II (MGAT2);	96.69
cd04182	186	GT_2_like_f GT_2_like_f is a subfamily of the glyc	96.68
PF01697	285	Glyco_transf_92: Glycosyltransferase family 92; In	96.67
cd04181	217	NTP_transferase NTP_transferases catalyze the tran	96.65
PF09258	247	Glyco_transf_64: Glycosyl transferase family 64 do	96.55
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	96.47
TIGR00466	238	kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe	96.33
PRK05450	245	3-deoxy-manno-octulosonate cytidylyltransferase; P	96.32
TIGR03310	188	matur_ygfJ molybdenum hydroxylase accessory protei	96.26
cd06422	221	NTP_transferase_like_1 NTP_transferase_like_1 is a	96.23
PRK00317	193	mobA molybdopterin-guanine dinucleotide biosynthes	96.23
PLN02400	1085	cellulose synthase	96.21
cd06425	233	M1P_guanylylT_B_like_N N-terminal domain of the M1	96.1
TIGR03202	190	pucB xanthine dehydrogenase accessory protein pucB	96.09
cd02503	181	MobA MobA catalyzes the formation of molybdopterin	96.0
cd06915	223	NTP_transferase_WcbM_like WcbM_like is a subfamily	96.0
cd06428	257	M1P_guanylylT_A_like_N N-terminal domain of M1P_gu	95.9
COG1213	239	Predicted sugar nucleotidyltransferases [Cell enve	95.9
PRK15480	292	glucose-1-phosphate thymidylyltransferase RfbA; Pr	95.67
PRK02726	200	molybdopterin-guanine dinucleotide biosynthesis pr	95.6
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	95.54
TIGR01207	286	rmlA glucose-1-phosphate thymidylyltransferase, sh	95.44
PRK13368	238	3-deoxy-manno-octulosonate cytidylyltransferase; P	95.44
cd02516	218	CDP-ME_synthetase CDP-ME synthetase is involved in	95.43
cd04189	236	G1P_TT_long G1P_TT_long represents the long form o	95.4
cd02518	233	GT2_SpsF SpsF is a glycosyltrnasferase implicated	95.27
PF00483	248	NTP_transferase: Nucleotidyl transferase This Pros	95.24
PLN02190	756	cellulose synthase-like protein	95.21
COG0746	192	MobA Molybdopterin-guanine dinucleotide biosynthes	95.2
PRK14355	459	glmU bifunctional N-acetylglucosamine-1-phosphate	95.09
PF03360	207	Glyco_transf_43: Glycosyltransferase family 43; In	95.08
PF13896	317	Glyco_transf_49: Glycosyl-transferase for dystrogl	94.85
PRK14352	482	glmU bifunctional N-acetylglucosamine-1-phosphate	94.8
TIGR01105	297	galF UTP-glucose-1-phosphate uridylyltransferase,	94.75
TIGR02665	186	molyb_mobA molybdopterin-guanine dinucleotide bios	94.6
TIGR03584	222	PseF pseudaminic acid CMP-transferase. The sequenc	94.56
cd02524	253	G1P_cytidylyltransferase G1P_cytidylyltransferase	94.5
PLN03153	537	hypothetical protein; Provisional	94.42
COG1208	358	GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas	94.4
TIGR01173	451	glmU UDP-N-acetylglucosamine diphosphorylase/gluco	94.39
TIGR01099	260	galU UTP-glucose-1-phosphate uridylyltransferase.	94.39
PRK14360	450	glmU bifunctional N-acetylglucosamine-1-phosphate	94.32
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	94.3
PRK00155	227	ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl	94.04
cd02538	240	G1P_TT_short G1P_TT_short is the short form of glu	94.04
PRK14489	366	putative bifunctional molybdopterin-guanine dinucl	94.0
cd02541	267	UGPase_prokaryotic Prokaryotic UGPase catalyses th	94.0
cd04183	231	GT2_BcE_like GT2_BcbE_like is likely involved in t	93.96
KOG3917	310	consensus Beta-1,4-galactosyltransferase B4GALT7/S	93.9
TIGR02623	254	G1P_cyt_trans glucose-1-phosphate cytidylyltransfe	93.88
PRK14353	446	glmU bifunctional N-acetylglucosamine-1-phosphate	93.85
PRK14358	481	glmU bifunctional N-acetylglucosamine-1-phosphate	93.81
cd06426	220	NTP_transferase_like_2 NTP_trnasferase_like_2 is a	93.68
cd02517	239	CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th	93.66
cd02509	274	GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf	93.63
cd02513	223	CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-	93.6
KOG2287	349	consensus Galactosyltransferases [Carbohydrate tra	93.51
cd04198	214	eIF-2B_gamma_N The N-terminal domain of gamma subu	93.51
PRK14354	458	glmU bifunctional N-acetylglucosamine-1-phosphate	93.46
TIGR00454	183	conserved hypothetical protein TIGR00454. At this	93.41
TIGR03552	195	F420_cofC 2-phospho-L-lactate guanylyltransferase	93.33
cd02523	229	PC_cytidylyltransferase Phosphocholine cytidylyltr	93.24
PRK14357	448	glmU bifunctional N-acetylglucosamine-1-phosphate	92.82
PRK13385	230	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans	92.77
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	92.73
cd06431	280	GT8_LARGE_C LARGE catalytic domain has closest hom	92.69
KOG1022	691	consensus Acetylglucosaminyltransferase EXT2/exost	92.54
PF03552	720	Cellulose_synt: Cellulose synthase; InterPro: IPR0	92.5
TIGR01208	353	rmlA_long glucose-1-phosphate thymidylylransferase	92.5
PRK10122	297	GalU regulator GalF; Provisional	92.19
PRK14356	456	glmU bifunctional N-acetylglucosamine-1-phosphate	92.0
PLN02436	1094	cellulose synthase A	91.7
PRK05293	380	glgC glucose-1-phosphate adenylyltransferase; Prov	91.4
cd00505	246	Glyco_transf_8 Members of glycosyltransferase fami	91.38
PRK13389	302	UTP--glucose-1-phosphate uridylyltransferase subun	91.38
PF07507	311	WavE: WavE lipopolysaccharide synthesis; InterPro:	91.24
TIGR00453	217	ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl	91.22
PF09837	122	DUF2064: Uncharacterized protein conserved in bact	90.92
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	90.87
PRK00576	178	molybdopterin-guanine dinucleotide biosynthesis pr	90.61
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	90.38
COG1212	247	KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase	89.72
KOG4179	568	consensus Lysyl hydrolase/glycosyltransferase fami	89.65
COG1210	291	GalU UDP-glucose pyrophosphorylase [Cell envelope	88.93
cd04197	217	eIF-2B_epsilon_N The N-terminal domain of epsilon	88.53
PRK15171	334	lipopolysaccharide 1,3-galactosyltransferase; Prov	88.5
PLN02915	1044	cellulose synthase A [UDP-forming], catalytic subu	87.47
PRK09451	456	glmU bifunctional N-acetylglucosamine-1-phosphate	87.32
PLN02190	756	cellulose synthase-like protein	86.94
PRK09382	378	ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp	86.89
COG1211	230	IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt	86.38
KOG2264	907	consensus Exostosin EXT1L [Signal transduction mec	86.04
cd06432	248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	85.96
COG2266	177	GTP:adenosylcobinamide-phosphate guanylyltransfera	85.47
PLN02241	436	glucose-1-phosphate adenylyltransferase	85.15
PRK00725	425	glgC glucose-1-phosphate adenylyltransferase; Prov	85.11
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	85.07
COG1207	460	GlmU N-acetylglucosamine-1-phosphate uridyltransfe	85.0
COG2068	199	Uncharacterized MobA-related protein [General func	84.98
PF02348	217	CTP_transf_3: Cytidylyltransferase; InterPro: IPR0	84.89
cd02507	216	eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma	84.44
PHA01631	176	hypothetical protein	84.44
TIGR02091	361	glgC glucose-1-phosphate adenylyltransferase. This	84.28
PLN02728	252	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans	82.42
PRK14490	369	putative bifunctional molybdopterin-guanine dinucl	82.02
COG1861	241	SpsF Spore coat polysaccharide biosynthesis protei	81.83
PRK00844	407	glgC glucose-1-phosphate adenylyltransferase; Prov	81.32
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	80.22

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=100.00  E-value=1.9e-41  Score=260.81  Aligned_cols=240  Identities=86%  Similarity=1.334  Sum_probs=208.4

Q ss_pred             CccccCCCCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcc
Q 026146            1 MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLG   79 (242)
Q Consensus         1 m~~~~~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g   79 (242)
                      |.+....+|++|||||+||+++.|+.+++++.++... .++|||||||||+|+|.++++++.+.++...+.++..++|.|
T Consensus         1 ~~~~~~~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G   80 (243)
T PLN02726          1 MEAPGEGAMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLG   80 (243)
T ss_pred             CCCCCCCCceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCC
Confidence            4555566789999999999999999999999776543 478999999999999999999998877656788888888999


Q ss_pred             hHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhC
Q 026146           80 LGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLW  159 (242)
Q Consensus        80 ~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (242)
                      ++.|+|.|++.|+++|++|+|+|+.++|++++++++.+.+++.+++.|.+.....+..++.+.+.+.....+.+.....+
T Consensus        81 ~~~a~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~  160 (243)
T PLN02726         81 LGTAYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLW  160 (243)
T ss_pred             HHHHHHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999998878899999987765544344555566666666666666677


Q ss_pred             CCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccchHHHHHHHHHHHHHh
Q 026146          160 PGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLL  239 (242)
Q Consensus       160 ~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  239 (242)
                      .++.+..|+++++||+++++++.+.+..+|.+|+|+++++.+.|+++.++|..+.+|.+|.|+.+..+++++.+.+..+.
T Consensus       161 ~~~~d~~g~~~~~rr~~~~~i~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~s~~~~~~~~~~~~~~~~~~  240 (243)
T PLN02726        161 PGVSDLTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGESKLGGSEIVQYLKGLLYLL  240 (243)
T ss_pred             CCCCcCCCcccceeHHHHHHHHhhccCCCcEEehHHHHHHHHcCCcEEEeCcEEeCCCCCcccCCHHHHHHHHHHHHHHe
Confidence            78888999999999999999987777778888999999999999999999999999999999999999999999888776


Q ss_pred             h
Q 026146          240 I  240 (242)
Q Consensus       240 ~  240 (242)
                      .
T Consensus       241 ~  241 (243)
T PLN02726        241 L  241 (243)
T ss_pred             e
Confidence            4

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]

Probab=100.00  E-value=1.7e-39  Score=225.71  Aligned_cols=234  Identities=67%  Similarity=1.095  Sum_probs=216.4

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      .++.|||+||||+.++|+-++.-+......  .++|||||||+|.|+|.+.++++++.+...++.+..+....|.+.|.-
T Consensus         2 ~~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~klGLgtAy~   81 (238)
T KOG2978|consen    2 SIKYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKKLGLGTAYI   81 (238)
T ss_pred             CcceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCcccchHHHH
Confidence            468999999999999998655555544443  689999999999999999999999999888999999999999999999


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCcccc
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDL  165 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (242)
                      .|+++|+|+|++++|+|..-+|.++.++++...+++.|++.|+++..+.+..+|++.++..++..+.+.+.+.++++++.
T Consensus        82 hgl~~a~g~fiviMDaDlsHhPk~ipe~i~lq~~~~~div~GTRYa~~ggV~gW~mkRk~IS~gAn~la~~ll~~~~sdl  161 (238)
T KOG2978|consen   82 HGLKHATGDFIVIMDADLSHHPKFIPEFIRLQKEGNYDIVLGTRYAGGGGVYGWDMKRKIISRGANFLARILLNPGVSDL  161 (238)
T ss_pred             hhhhhccCCeEEEEeCccCCCchhHHHHHHHhhccCcceeeeeeEcCCCceecchhhHHHHhhhhHHHHHHhccCCCccC
Confidence            99999999999999999999999999999999888899999999999999999999999999999999999999999999


Q ss_pred             ccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccchHHHHHHHHHHHHHhhc
Q 026146          166 TGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLIT  241 (242)
Q Consensus       166 ~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  241 (242)
                      +|++.++++++++.+-......+|...+|+..++.+.|+.|..||.+.+.|.+|+|+.+......|.++++.+|.-
T Consensus       162 tGsFrLykk~vl~~li~e~vSkGyvfqmEll~ra~~~~y~IgEvPitFvdR~~GeSKLg~~eIv~ylk~l~~Lf~~  237 (238)
T KOG2978|consen  162 TGSFRLYKKEVLEKLIEESVSKGYVFQMELLARARQHGYTIGEVPITFVDRTYGESKLGGKEIVQYLKGLLYLFAF  237 (238)
T ss_pred             cceeeeehHHHHHhhHHHhhccchhhhHHHHHhccccCceEeecceEEEeeccccccccHHHHHHHHHHHhhheee
Confidence            9999999999999986555688888899999999999999999999999999999999999999999999988753

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=100.00  E-value=1.4e-36  Score=231.12  Aligned_cols=223  Identities=61%  Similarity=0.963  Sum_probs=188.4

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      ||||+||+++.|..+|+++.+|.....+|||||||||+|+|.++++++.+.++  .+.++..+.|.|++.|+|.|++.|+
T Consensus         1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~--~i~~~~~~~n~G~~~a~n~g~~~a~   78 (224)
T cd06442           1 IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYP--RVRLIVRPGKRGLGSAYIEGFKAAR   78 (224)
T ss_pred             CeEeccchhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCC--ceEEEecCCCCChHHHHHHHHHHcC
Confidence            69999999999999999999997545799999999999999999999887765  6788888899999999999999999


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhhc
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLY  172 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  172 (242)
                      +||++|+|+|+.++|++++.+++.+.+++.++++|.+.........+.+.+.................++.+..|+++++
T Consensus        79 gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (224)
T cd06442          79 GDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFRAY  158 (224)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEEeeeecCCccCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCccchh
Confidence            99999999999999999999999977778899999877665544455555555544444444444566777888999999


Q ss_pred             chHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccchHHHHHHHHHHHH
Q 026146          173 KKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLY  237 (242)
Q Consensus       173 rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~~  237 (242)
                      ||++++++|......++.+|++++.++.+.|+++.++|...+.|..|.|+.+..+++++.+..+.
T Consensus       159 ~r~~~~~ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~s~~~~~~~~~~~~~~~~  223 (224)
T cd06442         159 RREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGESKLGGKEIVEYLKGLLR  223 (224)
T ss_pred             hHHHHHHHhhhccCCCcEEeHHHHHHHHHcCCeEEEeCeEEeccCCCcCceeHHHHHHHHHHHhh
Confidence            99999999833345677778999999999999999999999999999999999888888776654

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=100.00  E-value=1.5e-35  Score=220.92  Aligned_cols=188  Identities=20%  Similarity=0.194  Sum_probs=156.2

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcc---hHHHHH
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLG---LGTAYI   85 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g---~~~a~n   85 (242)
                      |.+|||||+||+++.+.++|+++.+|.+ +++|||||||+|+|+|.++++++.+.++..+++++....+.|   ++.++|
T Consensus         1 p~vsviip~~n~~~~l~~~L~sl~~q~~-~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~n   79 (196)
T cd02520           1 PGVSILKPLCGVDPNLYENLESFFQQDY-PKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNLI   79 (196)
T ss_pred             CCeEEEEecCCCCccHHHHHHHHHhccC-CCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHHH
Confidence            5799999999999999999999999865 569999999999999999999998887755677776665544   456788


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCcccc
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDL  165 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (242)
                      .|++.+++||++|+|+|+.++|+||+.+++.+.+++.+++.|.                                   ..
T Consensus        80 ~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~-----------------------------------~~  124 (196)
T cd02520          80 KGYEEARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL-----------------------------------CA  124 (196)
T ss_pred             HHHHhCCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee-----------------------------------cc
Confidence            9999999999999999999999999999999876678887765                                   35


Q ss_pred             ccchhhcchHHHHHhhhcccC-CCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch-HHHHHHH
Q 026146          166 TGSFRLYKKSVLEDVISSCVS-KGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG-SEIVEYL  232 (242)
Q Consensus       166 ~g~~~~~rr~~~~~~~~~~~~-~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~-~~~~~~~  232 (242)
                      .|+++++||++++++|++... ..+.||++|+.++.+.|+++.++|...+++..+.+...+ ++..||.
T Consensus       125 ~g~~~~~r~~~~~~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~~~~~~~~~~q~~rw~  193 (196)
T cd02520         125 FGKSMALRREVLDAIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLGSTSLASFWRRQLRWS  193 (196)
T ss_pred             cCceeeeEHHHHHhccChHHHhHHHHHHHHHHHHHHHcCCeEEEcchheeccCCcccHHHHHHHHHHHh
Confidence            577889999999999988653 345799999999999999999999988776554443222 4444443

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional

Probab=100.00  E-value=5.2e-34  Score=227.34  Aligned_cols=232  Identities=24%  Similarity=0.356  Sum_probs=194.6

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhc-------CCCeEEEEEeCCCCCChHHHHHHHHHHh--CCCcEEEeeCCCC
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR-------DVDFEIIVVDDGSPDGTQEVVKQLQQLY--GEDRILLRPRPKK   77 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~-------~~~~eiivvd~~s~d~t~~~l~~~~~~~--~~~~~~~~~~~~~   77 (242)
                      ..+.+|||||+||+++.|+.+++++.++..       ..++|||||||||+|+|.++++++.+.+  +...++++..+.|
T Consensus        68 ~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N  147 (333)
T PTZ00260         68 SDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN  147 (333)
T ss_pred             CCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC
Confidence            467899999999999999999999987643       2378999999999999999999988764  3346999999999


Q ss_pred             cchHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh---cCCcEEEEEEEeecCC--ccCchhhHHHHHhHHHH
Q 026146           78 LGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE---TGASIVTGTRYVRSGG--VHGWNLMRKLTSRGANV  152 (242)
Q Consensus        78 ~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~---~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~  152 (242)
                      .|+++|+|.|++.|+|||++++|+|...+++.+.++++.+.+   ++.++|+|++.....+  ....++.+.+.....+.
T Consensus       148 ~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~~~~~r~~~~~~~~~  227 (333)
T PTZ00260        148 KGKGGAVRIGMLASRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAKRKWYRNILMYGFHF  227 (333)
T ss_pred             CChHHHHHHHHHHccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCcccccCcHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988764   6789999988754322  34556777888888888


Q ss_pred             HHHHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccc-hHHHHHH
Q 026146          153 LAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLG-GSEIVEY  231 (242)
Q Consensus       153 ~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~-~~~~~~~  231 (242)
                      +.....+..+.+.++++.+++|++++.+.......+|..|.|+..++.+.|+++..+|+.+..+  +.|+++ .+...++
T Consensus       228 l~~~~~~~~i~D~~~Gfk~~~r~~~~~i~~~~~~~~~~fd~Ell~~a~~~g~~I~EvPv~~~~~--~~Sk~~~~~~~~~~  305 (333)
T PTZ00260        228 IVNTICGTNLKDTQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNWTEV--EGSKLNVISASIQM  305 (333)
T ss_pred             HHHHHcCCCcccCCCCeEEEeHHHHHHHhhhccccCccchHHHHHHHHHcCCCEEEEceeeEEC--CCCeechHHHHHHH
Confidence            8888888899999999999999999998444445677889999999999999999999987554  457666 4667777


Q ss_pred             HHHHHHHhh
Q 026146          232 LKGLLYLLI  240 (242)
Q Consensus       232 ~~~~~~~~~  240 (242)
                      .+.++++++
T Consensus       306 ~~~l~~~~~  314 (333)
T PTZ00260        306 ARDILLVRS  314 (333)
T ss_pred             HHHHHHHHH
Confidence            777776654

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=100.00  E-value=1.9e-34  Score=221.75  Aligned_cols=226  Identities=15%  Similarity=0.171  Sum_probs=164.4

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHH
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHG   87 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g   87 (242)
                      |.+|||||+||+++.|.++|+|+.+|.++ ..+|||||||+|+|+|.++++++... +...+.++....+.|++.|+|.|
T Consensus         1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~-~~~~i~~~~~~~~~G~~~a~n~g   79 (241)
T cd06427           1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLP-SIFRVVVVPPSQPRTKPKACNYA   79 (241)
T ss_pred             CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccC-CCeeEEEecCCCCCchHHHHHHH
Confidence            67999999999999999999999998765 35899999999999999999887432 12356666666788999999999


Q ss_pred             HhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEE--EEEEEeecCCccCchhhHHHHH----hHHHHHHHHHhCCC
Q 026146           88 LKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV--TGTRYVRSGGVHGWNLMRKLTS----RGANVLAQTLLWPG  161 (242)
Q Consensus        88 ~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  161 (242)
                      ++.++||||+|+|+|+.++|+++.++++.+.+.+.+++  .+.....+..   ..+......    .............+
T Consensus        80 ~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (241)
T cd06427          80 LAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNAR---ENWLTRMFALEYAAWFDYLLPGLARLG  156 (241)
T ss_pred             HHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCC---ccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999875434443  3332222211   111111111    11111111111122


Q ss_pred             -ccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCccc-chHHHHHHHHHHHHHh
Q 026146          162 -VSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKL-GGSEIVEYLKGLLYLL  239 (242)
Q Consensus       162 -~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~  239 (242)
                       .....|+++++||++++++|++.+ ..+.||.+++.|+.+.|+++.++|.....+ .+.+.. -.++..||.++.++++
T Consensus       157 ~~~~~~g~~~~~rr~~~~~vgg~~~-~~~~eD~~l~~rl~~~G~r~~~~~~~~~~~-~~~~~~~~~~q~~Rw~~g~~~~~  234 (241)
T cd06427         157 LPIPLGGTSNHFRTDVLRELGGWDP-FNVTEDADLGLRLARAGYRTGVLNSTTLEE-ANNALGNWIRQRSRWIKGYMQTW  234 (241)
T ss_pred             CeeecCCchHHhhHHHHHHcCCCCc-ccchhhHHHHHHHHHCCceEEEeccccccc-CcHhHHHHHHHHHHHhccHHHHH
Confidence             223467778999999999999865 467899999999999999999998755432 233322 3477888888888876


Q ss_pred             h
Q 026146          240 I  240 (242)
Q Consensus       240 ~  240 (242)
                      .
T Consensus       235 ~  235 (241)
T cd06427         235 L  235 (241)
T ss_pred             H
Confidence            4

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=100.00  E-value=2.9e-34  Score=216.50  Aligned_cols=204  Identities=31%  Similarity=0.486  Sum_probs=174.6

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcC---CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHh
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRD---VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLK   89 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~---~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~   89 (242)
                      ||||+||+++.|.++|+++.+|...   ..+|||||||||+|+|.++++++.+.++. .++++..+.|.|+++|+|.|++
T Consensus         1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~-~i~~i~~~~n~G~~~a~~~g~~   79 (211)
T cd04188           1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPA-LIRVLTLPKNRGKGGAVRAGML   79 (211)
T ss_pred             CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCC-cEEEEEcccCCCcHHHHHHHHH
Confidence            6999999999999999999998642   57999999999999999999999887663 3688888889999999999999


Q ss_pred             hcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCc-cCchhhHHHHHhHHHHHHHHHhCCCccccccc
Q 026146           90 HASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGV-HGWNLMRKLTSRGANVLAQTLLWPGVSDLTGS  168 (242)
Q Consensus        90 ~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  168 (242)
                      .|++|||+++|+|+.++++++.++++.+.+++.++++|.+.....+. ...++.+.........+.....+..+.+..++
T Consensus        80 ~a~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~g  159 (211)
T cd04188          80 AARGDYILFADADLATPFEELEKLEEALKTSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFLVRLLLGLGIKDTQCG  159 (211)
T ss_pred             HhcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeeccCCcccccccHHHHHHHHHHHHHHHHHcCCCCcccccC
Confidence            99999999999999999999999999977778999999888754432 33455566666666666666667777777778


Q ss_pred             hhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeecc
Q 026146          169 FRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRV  217 (242)
Q Consensus       169 ~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~  217 (242)
                      ..+++|++++++++......|.+|.|++.++.+.|+++.++|+.+.+|.
T Consensus       160 ~~~~~r~~~~~~~~~~~~~~~~~d~el~~r~~~~g~~~~~vpi~~~~~~  208 (211)
T cd04188         160 FKLFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVPVRWVEIP  208 (211)
T ss_pred             ceeEcHHHHHHHHhhhhccceEeeHHHHHHHHHcCCeEEEcCcceecCC
Confidence            8899999999997666677888999999999999999999998887765

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

Probab=100.00  E-value=3.5e-34  Score=219.13  Aligned_cols=219  Identities=19%  Similarity=0.228  Sum_probs=161.0

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhC--CCcEEEeeCCCCcc-hHHHH
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYG--EDRILLRPRPKKLG-LGTAY   84 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~--~~~~~~~~~~~~~g-~~~a~   84 (242)
                      |+||||||+||+++.|.++|+++.+|.++ ..+||||+|| |+|+|.++++++...++  ..++.++...++.| ++.|+
T Consensus         1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~   79 (232)
T cd06437           1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGAL   79 (232)
T ss_pred             CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHHH
Confidence            57999999999999999999999998765 3579999998 99999999998766542  34677777666667 68899


Q ss_pred             HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHH--H-HHH--HHhC
Q 026146           85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGAN--V-LAQ--TLLW  159 (242)
Q Consensus        85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~--~~~~  159 (242)
                      |.|++.++++||+|+|+|+.++|++|+++...+..++++++.+.....+..   ..+..........  . ...  ....
T Consensus        80 n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (232)
T cd06437          80 AEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHINAN---YSLLTRVQAMSLDYHFTIEQVARSST  156 (232)
T ss_pred             HHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeEcCC---CchhhHhhhhhHHhhhhHhHhhHhhc
Confidence            999999999999999999999999999987777655666676654433321   1122111111111  0 000  1111


Q ss_pred             CCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch-HHHHHHH
Q 026146          160 PGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG-SEIVEYL  232 (242)
Q Consensus       160 ~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~-~~~~~~~  232 (242)
                      .....+.|+++++||++++++|++.+ ..+.||++++.|+...|+++.++|.+.+++..+.+-..+ .+..||.
T Consensus       157 ~~~~~~~g~~~~~rr~~~~~vgg~~~-~~~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~rW~  229 (232)
T cd06437         157 GLFFNFNGTAGVWRKECIEDAGGWNH-DTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPASMSAYRSQQHRWS  229 (232)
T ss_pred             CCeEEeccchhhhhHHHHHHhCCCCC-CcchhhHHHHHHHHHCCCeEEEeccceeeeeCCcCHHHHHHHHHHhc
Confidence            22334567777899999999999865 457899999999999999999999988887766554443 4444443

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=100.00  E-value=2.5e-34  Score=227.73  Aligned_cols=208  Identities=19%  Similarity=0.153  Sum_probs=154.6

Q ss_pred             EEEEeCcccc-ccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHh
Q 026146           12 SIIIPTYNER-LNIALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLK   89 (242)
Q Consensus        12 siiip~~n~~-~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~   89 (242)
                      |||||+||+. +.|.+||+|+.+|+... .+|||||||||+|+|.+++.+.......+.++++..+.|.|.+.|+|.|++
T Consensus         1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~   80 (299)
T cd02510           1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR   80 (299)
T ss_pred             CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence            6999999999 99999999999887643 469999999999999998876322212247999999999999999999999


Q ss_pred             hcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCc-------------cCchhhHHHHHhHHHH--HH
Q 026146           90 HASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGV-------------HGWNLMRKLTSRGANV--LA  154 (242)
Q Consensus        90 ~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~--~~  154 (242)
                      .|+||||+|||+|+.++++||+.+++.+.+++..++.+.........             ..+.+...........  ..
T Consensus        81 ~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (299)
T cd02510          81 AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRE  160 (299)
T ss_pred             HccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhc
Confidence            99999999999999999999999999998766665554322111100             0000000000000000  00


Q ss_pred             HHHhCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeeeeeccCC
Q 026146          155 QTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITFVDRVFG  219 (242)
Q Consensus       155 ~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~  219 (242)
                      .......+....|+|+++||++|+++|+|++.+..  .||.|||+|+++.|+++.++|.+.+.|.++
T Consensus       161 ~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~  227 (299)
T cd02510         161 SPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFR  227 (299)
T ss_pred             CCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEecc
Confidence            00012235567899999999999999999875543  599999999999999999999887777655

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>PRK11204 N-glycosyltransferase; Provisional

Probab=100.00  E-value=1.1e-33  Score=234.00  Aligned_cols=225  Identities=20%  Similarity=0.295  Sum_probs=173.7

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      ..|++||+||+||+++.+.++++++.+|.+ +++||+||||||+|+|.+.++++.++++  ++++++.++|.|++.|+|.
T Consensus        52 ~~p~vsViIp~yne~~~i~~~l~sl~~q~y-p~~eiiVvdD~s~d~t~~~l~~~~~~~~--~v~~i~~~~n~Gka~aln~  128 (420)
T PRK11204         52 EYPGVSILVPCYNEGENVEETISHLLALRY-PNYEVIAINDGSSDNTGEILDRLAAQIP--RLRVIHLAENQGKANALNT  128 (420)
T ss_pred             CCCCEEEEEecCCCHHHHHHHHHHHHhCCC-CCeEEEEEECCCCccHHHHHHHHHHhCC--cEEEEEcCCCCCHHHHHHH
Confidence            457899999999999999999999999865 5899999999999999999999988765  6889998889999999999


Q ss_pred             HHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccCchhhHHHH----HhHHHHHHHH-HhCC
Q 026146           87 GLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHGWNLMRKLT----SRGANVLAQT-LLWP  160 (242)
Q Consensus        87 g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~  160 (242)
                      |++.+++||++++|+|+.++|++++++++.+++ ++.+++.|.....+..    .+.....    .......... ....
T Consensus       129 g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (420)
T PRK11204        129 GAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRS----TLLGRIQVGEFSSIIGLIKRAQRVYG  204 (420)
T ss_pred             HHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccch----hHHHHHHHHHHHHhhhHHHHHHHHhC
Confidence            999999999999999999999999999999964 4566676654443322    1111111    0000111111 1112


Q ss_pred             CccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccc-hHHHHHHHHHHHHHh
Q 026146          161 GVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLG-GSEIVEYLKGLLYLL  239 (242)
Q Consensus       161 ~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~  239 (242)
                      .+....|+++++||++++++|++++. ...||.+++.++.++|+++.++|.+..++..+++-.. .++..||.++.++.+
T Consensus       205 ~~~~~~G~~~~~rr~~l~~vgg~~~~-~~~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l  283 (420)
T PRK11204        205 RVFTVSGVITAFRKSALHEVGYWSTD-MITEDIDISWKLQLRGWDIRYEPRALCWILMPETLKGLWKQRLRWAQGGAEVL  283 (420)
T ss_pred             CceEecceeeeeeHHHHHHhCCCCCC-cccchHHHHHHHHHcCCeEEeccccEEEeECcccHHHHHHHHHHHhcCHHHHH
Confidence            34456788889999999999988654 4689999999999999999999998887766655433 366777776665543

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=100.00  E-value=5.4e-33  Score=212.72  Aligned_cols=222  Identities=18%  Similarity=0.209  Sum_probs=161.5

Q ss_pred             CcEEEEEeCcccc-ccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcc-hHHHHH
Q 026146            9 NKYSIIIPTYNER-LNIALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLG-LGTAYI   85 (242)
Q Consensus         9 ~~isiiip~~n~~-~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g-~~~a~n   85 (242)
                      |+||||||+||++ +.++++|+|+.+|..+. .+|||||||+|+|+|.++++++...+   .+.++..+.|.| +++++|
T Consensus         1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~n   77 (234)
T cd06421           1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY---GYRYLTRPDNRHAKAGNLN   77 (234)
T ss_pred             CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc---CceEEEeCCCCCCcHHHHH
Confidence            5799999999976 67899999999997642 28999999999999999999886543   355555555554 688899


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccCchhhHHHHH---hHHHHHHHHHhCCC
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHGWNLMRKLTS---RGANVLAQTLLWPG  161 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  161 (242)
                      .|++.+++||++|+|+|+.++|++++.++..+.+ ++.+++.+........... ........   .............+
T Consensus        78 ~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  156 (234)
T cd06421          78 NALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFD-WLADGAPNEQELFYGVIQPGRDRWG  156 (234)
T ss_pred             HHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcch-hHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999999999999999987 5666776655443332111 11111111   11111111111123


Q ss_pred             ccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccc-hHHHHHHHHHH
Q 026146          162 VSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLG-GSEIVEYLKGL  235 (242)
Q Consensus       162 ~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~-~~~~~~~~~~~  235 (242)
                      .....|+++++||++++++|++.+ ..++||++++.++.+.|+++.++|.+..++....+... .++..+|.++.
T Consensus       157 ~~~~~g~~~~~r~~~~~~ig~~~~-~~~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~~~~~~~~~~q~~rw~~~~  230 (234)
T cd06421         157 AAFCCGSGAVVRREALDEIGGFPT-DSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPETLAAYIKQRLRWARGM  230 (234)
T ss_pred             CceecCceeeEeHHHHHHhCCCCc-cceeccHHHHHHHHHcCceEEEecCccccccCCccHHHHHHHHHHHhcCC
Confidence            455678888999999999998864 45689999999999999999999988877665554332 35555555443

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=100.00  E-value=1.1e-32  Score=228.72  Aligned_cols=228  Identities=18%  Similarity=0.200  Sum_probs=171.5

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      ..|.+||+||+||++..+.++++++.+|.+ +++||+||||||+|+|.+.++++.++++  ++++++.++|.|++.|+|.
T Consensus        73 ~~p~vsViIP~yNE~~~i~~~l~sll~q~y-p~~eIivVdDgs~D~t~~~~~~~~~~~~--~v~vv~~~~n~Gka~AlN~  149 (444)
T PRK14583         73 GHPLVSILVPCFNEGLNARETIHAALAQTY-TNIEVIAINDGSSDDTAQVLDALLAEDP--RLRVIHLAHNQGKAIALRM  149 (444)
T ss_pred             CCCcEEEEEEeCCCHHHHHHHHHHHHcCCC-CCeEEEEEECCCCccHHHHHHHHHHhCC--CEEEEEeCCCCCHHHHHHH
Confidence            357899999999999999999999999966 5799999999999999999999888765  6888888889999999999


Q ss_pred             HHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHH-HhCCCccc
Q 026146           87 GLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQT-LLWPGVSD  164 (242)
Q Consensus        87 g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  164 (242)
                      |++.+++||++++|+|+.++|+++.++++.+.+ ++.+++.|.....+....................... .....+..
T Consensus       150 gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~  229 (444)
T PRK14583        150 GAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFT  229 (444)
T ss_pred             HHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceE
Confidence            999999999999999999999999999998864 4566666654443322110000000011111111111 11123445


Q ss_pred             cccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch-HHHHHHHHHHHHH
Q 026146          165 LTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG-SEIVEYLKGLLYL  238 (242)
Q Consensus       165 ~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~-~~~~~~~~~~~~~  238 (242)
                      .+|+++++||++++++|++.+. ...||.|++.++.++|+++.++|.+..+...+++-... ++..||.++..+.
T Consensus       230 ~sG~~~~~rr~al~~vGg~~~~-~i~ED~dl~~rl~~~G~~i~~~p~a~~~~~~p~t~~~~~~Qr~RW~~G~~~~  303 (444)
T PRK14583        230 VSGVVAAFRRRALADVGYWSPD-MITEDIDISWKLQLKHWSVFFEPRGLCWILMPETLRGLWKQRLRWAQGGAEV  303 (444)
T ss_pred             ecCceeEEEHHHHHHcCCCCCC-cccccHHHHHHHHHcCCeEEEeeccEEeeeCCCCHHHHHHHHHHHhCcHHHH
Confidence            6688889999999999988654 46899999999999999999999888776655554433 6667776554433

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=100.00  E-value=1.7e-32  Score=222.89  Aligned_cols=224  Identities=17%  Similarity=0.158  Sum_probs=166.3

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcc---hHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLG---LGT   82 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g---~~~   82 (242)
                      ...|.||||||+||+++.++++|+|+.+|.+ +++||||+||+|+|.|.++++++.+.+|..+++++..+++.|   +..
T Consensus        38 ~~~p~VSViiP~~nee~~l~~~L~Sl~~q~Y-p~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~  116 (373)
T TIGR03472        38 RAWPPVSVLKPLHGDEPELYENLASFCRQDY-PGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRKVS  116 (373)
T ss_pred             CCCCCeEEEEECCCCChhHHHHHHHHHhcCC-CCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChHHH
Confidence            3468899999999999999999999999976 569999999999999999999999988877788887665555   566


Q ss_pred             HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHH--HHHH----HH
Q 026146           83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGA--NVLA----QT  156 (242)
Q Consensus        83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~  156 (242)
                      +.+.+++.|++||++|+|+|+.++|++|++++..+++++.+++.+.......    ..+.........  ....    ..
T Consensus       117 ~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~  192 (373)
T TIGR03472       117 NLINMLPHARHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGRPV----PGFWSRLGAMGINHNFLPSVMVAR  192 (373)
T ss_pred             HHHHHHHhccCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCCCC----CCHHHHHHHHHhhhhhhHHHHHHH
Confidence            7777899999999999999999999999999999977778888774322111    122222211110  0111    11


Q ss_pred             HhCCCccccccchhhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch-HHHHHHHHH
Q 026146          157 LLWPGVSDLTGSFRLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG-SEIVEYLKG  234 (242)
Q Consensus       157 ~~~~~~~~~~g~~~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~-~~~~~~~~~  234 (242)
                      ..+ ......|+++++||++++++||+.+ .....||++++.++.+.|+++.+.|....++....+-... ++..||.+.
T Consensus       193 ~~~-~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~~v~~~~~~~s~~~~~~q~~RW~r~  271 (373)
T TIGR03472       193 ALG-RARFCFGATMALRRATLEAIGGLAALAHHLADDYWLGELVRALGLRVVLAPVVVDTDVHETSFATLLAHELRWSRT  271 (373)
T ss_pred             hcc-CCccccChhhheeHHHHHHcCChHHhcccchHHHHHHHHHHHcCCeEEecchhhhcCCCccCHHHHHHHHHHHHhh
Confidence            111 1233568889999999999999975 3456899999999999999999999776665543332222 444445443


Q ss_pred             H
Q 026146          235 L  235 (242)
Q Consensus       235 ~  235 (242)
                      .
T Consensus       272 ~  272 (373)
T TIGR03472       272 I  272 (373)
T ss_pred             h
Confidence            3

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=100.00  E-value=2.7e-34  Score=219.16  Aligned_cols=222  Identities=23%  Similarity=0.296  Sum_probs=144.8

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcc---hHHHHH
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLG---LGTAYI   85 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g---~~~a~n   85 (242)
                      |+|+||||+||+.+.+.++|+++.+|.. +.++|+||||++++++.+.++++.+.++...++++..+.+.|   ++.++|
T Consensus         1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~-~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n   79 (228)
T PF13641_consen    1 PRVSVVIPAYNEDDVLRRCLESLLAQDY-PRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALN   79 (228)
T ss_dssp             --EEEE--BSS-HHHHHHHHHHHTTSHH-HTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHH
T ss_pred             CEEEEEEEecCCHHHHHHHHHHHHcCCC-CCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHH
Confidence            6799999999999999999999999876 689999999999999999999998888855788888776665   789999


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHH-HhHHHHHHHHHhCCCccc
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLT-SRGANVLAQTLLWPGVSD  164 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  164 (242)
                      .|++.+++||++|+|+|+.++|++|..+++.+.+++++++.+.....+.. .......... ..............+...
T Consensus        80 ~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (228)
T PF13641_consen   80 EALAAARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDR-NWLTRLQDLFFARWHLRFRSGRRALGVAF  158 (228)
T ss_dssp             HHHHH---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCC-CEEEE-TT--S-EETTTS-TT-B----S-
T ss_pred             HHHHhcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCC-CHHHHHHHHHHhhhhhhhhhhhcccceee
Confidence            99999999999999999999999999999999767888888777554322 1111111100 000000000011122344


Q ss_pred             cccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch-HHHHHHHH
Q 026146          165 LTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG-SEIVEYLK  233 (242)
Q Consensus       165 ~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~-~~~~~~~~  233 (242)
                      +.|+++++||++++++|++++ ...+||.+++.++.++|+++.++|...++|..+.+-..+ ++..||.+
T Consensus       159 ~~G~~~~~rr~~~~~~g~fd~-~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~RW~~  227 (228)
T PF13641_consen  159 LSGSGMLFRRSALEEVGGFDP-FILGEDFDLCLRLRAAGWRIVYAPDALVYHEEPSSLKAFFKQRFRWSR  227 (228)
T ss_dssp             B--TEEEEEHHHHHHH-S--S-SSSSHHHHHHHHHHHTT--EEEEEEEEEEE--SSSTHHHHHHHHHHH-
T ss_pred             ccCcEEEEEHHHHHHhCCCCC-CCcccHHHHHHHHHHCCCcEEEECCcEEEEeCCCCHHHHHHHHhccCc
Confidence            568888999999999999877 677799999999999999999999998888766554332 44555543

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=100.00  E-value=6.4e-32  Score=223.52  Aligned_cols=231  Identities=13%  Similarity=0.117  Sum_probs=168.9

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY   84 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~   84 (242)
                      ...|++|||||+||+++.+.++++++.+|.++. .+|||||||||+|+|.++++++.+.++  .+.++..+.+.|++.|+
T Consensus        46 ~~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~--~v~v~~~~~~~Gka~Al  123 (439)
T TIGR03111        46 GKLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFP--GLSLRYMNSDQGKAKAL  123 (439)
T ss_pred             CCCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCC--CeEEEEeCCCCCHHHHH
Confidence            346899999999999999999999999997763 479999999999999999999888766  56665556678999999


Q ss_pred             HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhc-CCcEEEEEEEeecCCc--cCchhhHHHHH-hHHHHHHHHH---
Q 026146           85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET-GASIVTGTRYVRSGGV--HGWNLMRKLTS-RGANVLAQTL---  157 (242)
Q Consensus        85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~---  157 (242)
                      |.|++.+++||++++|+|+.++|++++++++.++++ +.+++.|......+..  ....+...... ...+......   
T Consensus       124 N~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~r  203 (439)
T TIGR03111       124 NAAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQAFLAGR  203 (439)
T ss_pred             HHHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999753 4555555544322110  00000000000 0011111001   


Q ss_pred             ----hCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHH-HcCCceEEeeeeeeeccCCCccc-chHHHHHH
Q 026146          158 ----LWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRAC-RKGYHIEEVPITFVDRVFGSSKL-GGSEIVEY  231 (242)
Q Consensus       158 ----~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~-~~g~~i~~~p~~~~~~~~~~s~~-~~~~~~~~  231 (242)
                          ....+...+|+++++||++++++|++++. ..+||.+++.++. ..|+++.++|.+..++..+.+-. ..++..||
T Consensus       204 ~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~-~i~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~p~t~~~~~~QR~RW  282 (439)
T TIGR03111       204 NFESQVNSLFTLSGAFSAFRRETILKTQLYNSE-TVGEDTDMTFQIRELLDGKVYLCENAIFYVDPIDGLNKLYTQRQRW  282 (439)
T ss_pred             HHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCC-CcCccHHHHHHHHHhcCCeEEECCCCEEEEECCcCHHHHHHHHHHH
Confidence                11234456788889999999999988654 4699999999996 46999999998888776544332 34666777


Q ss_pred             HHHHHHHh
Q 026146          232 LKGLLYLL  239 (242)
Q Consensus       232 ~~~~~~~~  239 (242)
                      .++.++.+
T Consensus       283 ~rG~~qv~  290 (439)
T TIGR03111       283 QRGELEVS  290 (439)
T ss_pred             hccHHHHH
Confidence            66665543

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine

Probab=100.00  E-value=9e-32  Score=204.03  Aligned_cols=207  Identities=17%  Similarity=0.210  Sum_probs=148.2

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee----CCCCcchHHHHHHHH
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP----RPKKLGLGTAYIHGL   88 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~----~~~~~g~~~a~n~g~   88 (242)
                      ||||+||+++.|++||+||.+|+.+..+|||||||||+|+|.++++++.+.++..+++++.    .+.+.|.+.|+|.|+
T Consensus         1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~g~   80 (219)
T cd06913           1 IILPVHNGEQWLDECLESVLQQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQAI   80 (219)
T ss_pred             CEEeecCcHHHHHHHHHHHHhCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHHHH
Confidence            6899999999999999999999764469999999999999999999988776555666654    345679999999999


Q ss_pred             hhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHH-HHHHHHhCCCcccccc
Q 026146           89 KHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGAN-VLAQTLLWPGVSDLTG  167 (242)
Q Consensus        89 ~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g  167 (242)
                      +.|+|||++|+|+|+.++|+++++++..+.+++..++ +.............+.......... .........+. ....
T Consensus        81 ~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  158 (219)
T cd06913          81 AQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPNSII-GCQVRRIPEDSTERYTRWINTLTREQLLTQVYTSHGP-TVIM  158 (219)
T ss_pred             HhcCCCEEEEECCCccCChhHHHHHHHHHHhCCCcEE-EEEEEecCcccchhhHHHHHhcCHHHHHHHHHhhcCC-cccc
Confidence            9999999999999999999999999988876554444 4443322211111111111111011 11111111111 1222


Q ss_pred             chhhcchHHHHHhhhcccC-CCcccchHHHHHHHHcCCceEEeeeeee-eccCCCc
Q 026146          168 SFRLYKKSVLEDVISSCVS-KGYVFQMEMIVRACRKGYHIEEVPITFV-DRVFGSS  221 (242)
Q Consensus       168 ~~~~~rr~~~~~~~~~~~~-~~~~~d~~~~~~~~~~g~~i~~~p~~~~-~~~~~~s  221 (242)
                      ..+++||++++++|++.+. ..+.||++|+.|+.+.|.++.++|...+ +|.++.|
T Consensus       159 ~~~~~rr~~~~~~g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~yr~~~~s  214 (219)
T cd06913         159 PTWFCSREWFSHVGPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCLLLYRYHPGA  214 (219)
T ss_pred             ccceeehhHHhhcCCccchhccchhHHHHHHHHHHcCCceEEEcceeeeeeecCCC
Confidence            2347999999999998764 4567999999999999999999997654 4444444

This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.

>PRK10073 putative glycosyl transferase; Provisional

Probab=100.00  E-value=1.2e-31  Score=213.62  Aligned_cols=213  Identities=19%  Similarity=0.238  Sum_probs=157.9

Q ss_pred             cCCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146            5 NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY   84 (242)
Q Consensus         5 ~~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~   84 (242)
                      +.++|.||||||+||.++.|.+||+|+.+|+. .++|||||||||+|+|.++++++.+.++  ++++++. +|.|.+.|+
T Consensus         2 ~~~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~-~~~EIIiVdDgStD~t~~i~~~~~~~~~--~i~vi~~-~n~G~~~ar   77 (328)
T PRK10073          2 MNSTPKLSIIIPLYNAGKDFRAFMESLIAQTW-TALEIIIVNDGSTDNSVEIAKHYAENYP--HVRLLHQ-ANAGVSVAR   77 (328)
T ss_pred             CCCCCeEEEEEeccCCHHHHHHHHHHHHhCCC-CCeEEEEEeCCCCccHHHHHHHHHhhCC--CEEEEEC-CCCChHHHH
Confidence            34568999999999999999999999999976 5899999999999999999999988765  7888875 599999999


Q ss_pred             HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEee-cCCccCchhh--HHHHH----hHHHHHHHHH
Q 026146           85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVR-SGGVHGWNLM--RKLTS----RGANVLAQTL  157 (242)
Q Consensus        85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~--~~~~~----~~~~~~~~~~  157 (242)
                      |.|++.|+|+||+|+|+|+.+.|++++.+++.+++++.+++.+..... ..+.......  .....    ....++...+
T Consensus        78 N~gl~~a~g~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  157 (328)
T PRK10073         78 NTGLAVATGKYVAFPDADDVVYPTMYETLMTMALEDDLDVAQCNADWCFRDTGETWQSIPSDRLRSTGVLSGPDWLRMAL  157 (328)
T ss_pred             HHHHHhCCCCEEEEECCCCccChhHHHHHHHHHHhCCCCEEEEccEEEEeCCCccccccccccccccceechHHHHHHHH
Confidence            999999999999999999999999999999998877888887643221 1110000000  00000    0111112222


Q ss_pred             hCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeee-eeccCCCcc
Q 026146          158 LWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITF-VDRVFGSSK  222 (242)
Q Consensus       158 ~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~-~~~~~~~s~  222 (242)
                      ....... ..++.++||+++++.|...+.....||..|+.++...+.++.++|... .|+.++.|.
T Consensus       158 ~~~~~~~-~~~~~l~Rr~~l~~~~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ly~Yr~~~~Si  222 (328)
T PRK10073        158 SSRRWTH-VVWLGVYRRDFIVKNNIKFEPGLHHQDIPWTTEVMFNALRVRYTEQSLYKYYLHDTSV  222 (328)
T ss_pred             hhCCCCc-cHhHHHHHHHHHHHcCCccCCCCEeccHHHHHHHHHHCCEEEEECCCEEEEEecCCcc
Confidence            2222222 234568999999998654444445699999999999999999998654 456665553

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

Probab=100.00  E-value=7.2e-31  Score=208.81  Aligned_cols=219  Identities=24%  Similarity=0.404  Sum_probs=176.8

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTA   83 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a   83 (242)
                      ..++++|||||+||+++.++++++++.+...+  .++|||||||||+|+|.++++++.+.. ..++..+....|.|++.|
T Consensus         3 ~~~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~~~-~~~v~~i~~~~n~G~~~A   81 (325)
T PRK10714          3 HPIKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAP-DSHIVAILLNRNYGQHSA   81 (325)
T ss_pred             CCCCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHhhc-CCcEEEEEeCCCCCHHHH
Confidence            44578999999999999999999988653222  578999999999999999999876543 246777777889999999


Q ss_pred             HHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCcc
Q 026146           84 YIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVS  163 (242)
Q Consensus        84 ~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (242)
                      +|.|+++|++||++++|+|...+|+++.++++.+++ +.|+|.+.+...     ..++.+...+...+.+.+...+..+.
T Consensus        82 ~~~G~~~A~gd~vv~~DaD~q~~p~~i~~l~~~~~~-~~DvV~~~r~~~-----~~~~~r~~~s~~~~~l~~~~~g~~~~  155 (325)
T PRK10714         82 IMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVVGTVRQNR-----QDSWFRKTASKMINRLIQRTTGKAMG  155 (325)
T ss_pred             HHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHh-hCCEEEEEEcCC-----CCcHHHHHHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999999999864 688887755322     23566777777777777777888888


Q ss_pred             ccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccchHHHHHHHHHHH
Q 026146          164 DLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLL  236 (242)
Q Consensus       164 ~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~  236 (242)
                      +..+++.+++|++++.+....+...+     +...+...|+++..+|+....|.+|.|+++..+++++....+
T Consensus       156 d~~~gfr~~~r~~~~~l~~~~~~~~~-----~~~l~~~~g~~i~evpv~~~~R~~G~Sk~~~~~~~~~~~~~~  223 (325)
T PRK10714        156 DYGCMLRAYRRHIVDAMLHCHERSTF-----IPILANTFARRAIEIPVHHAEREFGDSKYSFMRLINLMYDLV  223 (325)
T ss_pred             CCCcCeEEEcHHHHHHHHHCCCCccH-----HHHHHHHcCCCEEEEEeEecCccCCcCCCCHHHHHHHHHHHH
Confidence            88888889999999998433333222     334567789999999999999999999999888777764443

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=100.00  E-value=5e-32  Score=209.20  Aligned_cols=223  Identities=24%  Similarity=0.189  Sum_probs=168.3

Q ss_pred             cEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHH
Q 026146           10 KYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGL   88 (242)
Q Consensus        10 ~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~   88 (242)
                      ++|||||+||+++.+.++|+++.+|... .++|||||||+|+|+|.+.++++.+..+  .+.++..+ +.|.+.|+|.|+
T Consensus         1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~--~v~~i~~~-~~~~~~a~N~g~   77 (249)
T cd02525           1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDP--RIRLIDNP-KRIQSAGLNIGI   77 (249)
T ss_pred             CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCC--eEEEEeCC-CCCchHHHHHHH
Confidence            4899999999999999999999998764 5789999999999999999999877644  67888765 568999999999


Q ss_pred             hhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHH---HHHh---CCCc
Q 026146           89 KHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLA---QTLL---WPGV  162 (242)
Q Consensus        89 ~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~  162 (242)
                      +.+++||++|+|+|+.++|++++++++.+.+++.+++.|........    ...............   ....   ....
T Consensus        78 ~~a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (249)
T cd02525          78 RNSRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGES----KFQKAIAVAQSSPLGSGGSAYRGGAVKIG  153 (249)
T ss_pred             HHhCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCC----hHHHHHHHHhhchhccCCccccccccccc
Confidence            99999999999999999999999999988877888888766543322    111110000000000   0000   0002


Q ss_pred             cccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCccc-chHHHHHHHHHHHHHh
Q 026146          163 SDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKL-GGSEIVEYLKGLLYLL  239 (242)
Q Consensus       163 ~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~  239 (242)
                      ....|++++++|++++++|++.+....+||.+|+.++.+.|+++.++|....+|....+.. -+++..+|..+..+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~s~~~~~~~~~r~~~~~~~~~  231 (249)
T cd02525         154 YVDTVHHGAYRREVFEKVGGFDESLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYPRSTLKKLARQYFRYGKWRARTL  231 (249)
T ss_pred             cccccccceEEHHHHHHhCCCCcccCccchhHHHHHHHHcCcEEEEcCCeEEEEcCCCCHHHHHHHHHHHhhhhHHHH
Confidence            2356777899999999999888777778999999999999999999998777665544322 2356677776666544

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=100.00  E-value=3.8e-32  Score=208.38  Aligned_cols=223  Identities=17%  Similarity=0.159  Sum_probs=160.1

Q ss_pred             EEEEeCcccc-ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChH-HHHHHHHHHhCCCcEEEeeCCCCcc-hHHHHHHHH
Q 026146           12 SIIIPTYNER-LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQ-EVVKQLQQLYGEDRILLRPRPKKLG-LGTAYIHGL   88 (242)
Q Consensus        12 siiip~~n~~-~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~-~~l~~~~~~~~~~~~~~~~~~~~~g-~~~a~n~g~   88 (242)
                      |||||+||++ +.|.++|++|.+|.+ +++|||||||+|+|+|. +.++++.+..+ .++.++....+.| +++|+|.|+
T Consensus         1 siiip~~ne~~~~l~~~l~sl~~q~~-~~~eiiVvdd~s~D~t~~~~i~~~~~~~~-~~i~~i~~~~~~G~~~~a~n~g~   78 (236)
T cd06435           1 SIHVPCYEEPPEMVKETLDSLAALDY-PNFEVIVIDNNTKDEALWKPVEAHCAQLG-ERFRFFHVEPLPGAKAGALNYAL   78 (236)
T ss_pred             CeeEeeCCCcHHHHHHHHHHHHhCCC-CCcEEEEEeCCCCchhHHHHHHHHHHHhC-CcEEEEEcCCCCCCchHHHHHHH
Confidence            6999999997 789999999998865 57899999999999975 66777766543 4677887777777 589999999


Q ss_pred             hhcC--CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHH---HhCCCcc
Q 026146           89 KHAS--GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQT---LLWPGVS  163 (242)
Q Consensus        89 ~~a~--~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  163 (242)
                      +.+.  +||++|+|+|+.++|++|.+++..+++++.+++.+........  ...+...........+...   .......
T Consensus        79 ~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (236)
T cd06435          79 ERTAPDAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGE--ESLFKRMCYAEYKGFFDIGMVSRNERNAI  156 (236)
T ss_pred             HhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCC--ccHHHHHHhHHHHHHHHHHhccccccCce
Confidence            9986  6999999999999999999999998766677776543322211  1122111111011111100   0111223


Q ss_pred             ccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch-HHHHHHHHHHHHHh
Q 026146          164 DLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG-SEIVEYLKGLLYLL  239 (242)
Q Consensus       164 ~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~  239 (242)
                      ...|+++++||++++++|++++. .+.||.+|+.|+.+.|+++.++|....++..+.+-..+ ++..||..+.++..
T Consensus       157 ~~~g~~~~~rr~~~~~iGgf~~~-~~~eD~dl~~r~~~~G~~~~~~~~~~~~~~~~~~~~~~~~q~~rw~~g~~~~~  232 (236)
T cd06435         157 IQHGTMCLIRRSALDDVGGWDEW-CITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQRFRWAYGAVQIL  232 (236)
T ss_pred             EEecceEEEEHHHHHHhCCCCCc-cccchHHHHHHHHHCCcEEEEcchhhccCcCcccHHHHHHHHHHHhcchhhhh
Confidence            35677789999999999998765 36899999999999999999999877765544443333 45567766655543

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=100.00  E-value=3.3e-31  Score=205.03  Aligned_cols=221  Identities=22%  Similarity=0.249  Sum_probs=166.9

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY   84 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~   84 (242)
                      ...|++|||||+||+++.|.++|+++.+|.... .+|+|||||+|+|.|.++++++.+.    ++.++..+.|.|++.|+
T Consensus        26 ~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~----~v~~i~~~~~~g~~~a~  101 (251)
T cd06439          26 AYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK----GVKLLRFPERRGKAAAL  101 (251)
T ss_pred             CCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC----cEEEEEcCCCCChHHHH
Confidence            457889999999999999999999999986643 3899999999999999999987543    48888888899999999


Q ss_pred             HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHH-hCCCcc
Q 026146           85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTL-LWPGVS  163 (242)
Q Consensus        85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  163 (242)
                      |.|++.+++||++|+|+|+.+++++++++++.+.+++.+++.+.........  ................... ......
T Consensus       102 n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (251)
T cd06439         102 NRALALATGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGG--SGSGEGLYWKYENWLKRAESRLGSTV  179 (251)
T ss_pred             HHHHHHcCCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcc--cchhHHHHHHHHHHHHHHHHhcCCee
Confidence            9999999999999999999999999999999997677888888666544321  1111111111111111111 112244


Q ss_pred             ccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCccc-chHHHHHHHHHHH
Q 026146          164 DLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKL-GGSEIVEYLKGLL  236 (242)
Q Consensus       164 ~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~-~~~~~~~~~~~~~  236 (242)
                      ...|+++++||++++   ++ ......||.+++.++.+.|+++.++|....++..+.+.. .+.+..+|.++.+
T Consensus       180 ~~~g~~~~~rr~~~~---~~-~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~g~~  249 (251)
T cd06439         180 GANGAIYAIRRELFR---PL-PADTINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDGSEEFRRRVRIAAGNL  249 (251)
T ss_pred             eecchHHHhHHHHhc---CC-CcccchhHHHHHHHHHHcCCeEEeccccEEEEeCcccHHHHHHHHHHHHhccc
Confidence            567888889999998   22 334457899999999999999999998888777655442 3466666665543

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=99.98  E-value=6.3e-31  Score=214.37  Aligned_cols=199  Identities=19%  Similarity=0.231  Sum_probs=152.8

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCC-cEEEeeCC----CCcchH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGED-RILLRPRP----KKLGLG   81 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~-~~~~~~~~----~~~g~~   81 (242)
                      ..|+||||||+||+++.|++||++|.+|.++.++|||||||+|+|+|.++++++.+.+|.. ++++++.+    .+.|++
T Consensus        38 ~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~  117 (384)
T TIGR03469        38 AWPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKL  117 (384)
T ss_pred             CCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchH
Confidence            4689999999999999999999999999765469999999999999999999998766522 57777643    235889


Q ss_pred             HHHHHHHhhcC-----CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHH--
Q 026146           82 TAYIHGLKHAS-----GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLA--  154 (242)
Q Consensus        82 ~a~n~g~~~a~-----~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  154 (242)
                      .|+|.|++.|+     +||++|+|+|+.++|++++++++.+++++.+++.+.......     ++.............  
T Consensus       118 ~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~~-----~~~~~~~~~~~~~~~~~  192 (384)
T TIGR03469       118 WAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRCE-----SFWEKLLIPAFVFFFQK  192 (384)
T ss_pred             HHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccCC-----CHHHHHHHHHHHHHHHH
Confidence            99999999999     999999999999999999999999988788877654332221     111111111110100  


Q ss_pred             ----HHHh--CCCccccccchhhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEee
Q 026146          155 ----QTLL--WPGVSDLTGSFRLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       155 ----~~~~--~~~~~~~~g~~~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p  210 (242)
                          ....  ...+....|+|+++||++++++||+++ ...+.||.+++.++.++|+++...+
T Consensus       193 ~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~  255 (384)
T TIGR03469       193 LYPFRWVNDPRRRTAAAAGGCILIRREALERIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGL  255 (384)
T ss_pred             hcchhhhcCCCccceeecceEEEEEHHHHHHcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEe
Confidence                0001  112334578899999999999999865 3457899999999999999999875

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=99.98  E-value=7.8e-32  Score=201.86  Aligned_cols=196  Identities=19%  Similarity=0.258  Sum_probs=149.6

Q ss_pred             CcEEEEEeCcccc-ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChH-HHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            9 NKYSIIIPTYNER-LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQ-EVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         9 ~~isiiip~~n~~-~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~-~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      |++|||||+||++ +.+.++|+|+.+|+. +.+|||||||||+|++. .+++.+....+  .++++..+.+.|.+.|+|.
T Consensus         1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~-~~~eiivvd~gs~d~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~a~n~   77 (202)
T cd04184           1 PLISIVMPVYNTPEKYLREAIESVRAQTY-PNWELCIADDASTDPEVKRVLKKYAAQDP--RIKVVFREENGGISAATNS   77 (202)
T ss_pred             CeEEEEEecccCcHHHHHHHHHHHHhCcC-CCeEEEEEeCCCCChHHHHHHHHHHhcCC--CEEEEEcccCCCHHHHHHH
Confidence            5799999999999 999999999999865 57899999999999754 45555555533  6888888889999999999


Q ss_pred             HHhhcCCCEEEEEeCCCCCCCCChHHHHHHH-HhcCCcEEEEEEEeecCC-ccCchhhHHHHHhHHHHHHHHHhCCCccc
Q 026146           87 GLKHASGSFVVIMDADLSHHPKYLPSFIKKQ-LETGASIVTGTRYVRSGG-VHGWNLMRKLTSRGANVLAQTLLWPGVSD  164 (242)
Q Consensus        87 g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (242)
                      |++.+++||++|+|+|+.++|++++.+++.+ ..++.+++++........ .........  ....    ......   .
T Consensus        78 g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~---~  148 (202)
T cd04184          78 ALELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFFKP--DWSP----DLLLSQ---N  148 (202)
T ss_pred             HHHhhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEeccccCC--CCCH----HHhhhc---C
Confidence            9999999999999999999999999999998 456788887644332211 000000000  0000    000111   2


Q ss_pred             cccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeec
Q 026146          165 LTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDR  216 (242)
Q Consensus       165 ~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~  216 (242)
                      ..++++++||++++++|++++....++|++++.|+.+.|+++.++|.+.+++
T Consensus       149 ~~~~~~~~~r~~~~~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~~~~~  200 (202)
T cd04184         149 YIGHLLVYRRSLVRQVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPRVLYHW  200 (202)
T ss_pred             CccceEeEEHHHHHHhCCCCcCcccchhHHHHHHHHhccceEEEccHhhhhh
Confidence            3456668999999999999777667899999999999999999999866543

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=99.98  E-value=2.4e-31  Score=199.09  Aligned_cols=195  Identities=19%  Similarity=0.220  Sum_probs=147.9

Q ss_pred             EEEEeCcccc--ccHHHHHHHHHhhhcCCCeEEEEEeCCC-CCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHH
Q 026146           12 SIIIPTYNER--LNIALIVYLIFKHLRDVDFEIIVVDDGS-PDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGL   88 (242)
Q Consensus        12 siiip~~n~~--~~l~~~l~sl~~~~~~~~~eiivvd~~s-~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~   88 (242)
                      ||+||+||++  +.|.++|+|+.+|.. +++||||||||| +|.|.++++++.++++   ++++..++|.|.+.|+|.|+
T Consensus         1 sviip~~n~~~~~~l~~~l~Sl~~q~~-~~~eiiivdd~ss~d~t~~~~~~~~~~~~---i~~i~~~~n~G~~~a~N~g~   76 (201)
T cd04195           1 SVLMSVYIKEKPEFLREALESILKQTL-PPDEVVLVKDGPVTQSLNEVLEEFKRKLP---LKVVPLEKNRGLGKALNEGL   76 (201)
T ss_pred             CEEEEccccchHHHHHHHHHHHHhcCC-CCcEEEEEECCCCchhHHHHHHHHHhcCC---eEEEEcCccccHHHHHHHHH
Confidence            6999999986  589999999999976 468999999998 6778888988877654   88888888999999999999


Q ss_pred             hhcCCCEEEEEeCCCCCCCCChHHHHHHHHhc-CCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCcccccc
Q 026146           89 KHASGSFVVIMDADLSHHPKYLPSFIKKQLET-GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTG  167 (242)
Q Consensus        89 ~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  167 (242)
                      +.+++||++|+|+|+.++|++++.+++.++++ +.+++.|.............. .. ............  .......+
T Consensus        77 ~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~~~~~~  152 (201)
T cd04195          77 KHCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGK-RR-LPTSHDDILKFA--RRRSPFNH  152 (201)
T ss_pred             HhcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecc-cc-CCCCHHHHHHHh--ccCCCCCC
Confidence            99999999999999999999999999998754 566666654433221110000 00 000001111111  11222446


Q ss_pred             chhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeee
Q 026146          168 SFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVD  215 (242)
Q Consensus       168 ~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~  215 (242)
                      +++++||++++++|++.+. .+.||++++.++..+|+++.++|.+.++
T Consensus       153 ~~~~~rr~~~~~~g~~~~~-~~~eD~~~~~r~~~~g~~~~~~~~~~~~  199 (201)
T cd04195         153 PTVMFRKSKVLAVGGYQDL-PLVEDYALWARMLANGARFANLPEILVK  199 (201)
T ss_pred             hHHhhhHHHHHHcCCcCCC-CCchHHHHHHHHHHcCCceecccHHHhh
Confidence            6779999999999988665 7899999999999999999999976544

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=99.97  E-value=1.3e-30  Score=198.92  Aligned_cols=194  Identities=19%  Similarity=0.210  Sum_probs=146.7

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--CCcchHHHHHHHHh
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--KKLGLGTAYIHGLK   89 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--~~~g~~~a~n~g~~   89 (242)
                      ||||+||+.+.|.++|+++.+|..+. .+|||||||+|+|+|.++++ +....+...+.++..+  .+.|++.++|.|++
T Consensus         1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~-~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g~~   79 (229)
T cd04192           1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE-FAAAKPNFQLKILNNSRVSISGKKNALTTAIK   79 (229)
T ss_pred             CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-HHHhCCCcceEEeeccCcccchhHHHHHHHHH
Confidence            69999999999999999999997642 38999999999999999888 4444444578888766  57899999999999


Q ss_pred             hcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHH----HHHHHHHhCCCcccc
Q 026146           90 HASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGA----NVLAQTLLWPGVSDL  165 (242)
Q Consensus        90 ~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  165 (242)
                      .+++||++|+|+|+.++|++++++++.+.+++..++.|........    .+.........    ...............
T Consensus        80 ~~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (229)
T cd04192          80 AAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGK----SLLAKFQRLDWLSLLGLIAGSFGLGKPFMC  155 (229)
T ss_pred             HhcCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEeeeeeecCCc----cHHHHHHHHHHHHHHHHHhhHHHhcCcccc
Confidence            9999999999999999999999999988877777877765544221    11111111100    000011111112234


Q ss_pred             ccchhhcchHHHHHhhhcccC-CCcccchHHHHHHHHcCC-ceEEeee
Q 026146          166 TGSFRLYKKSVLEDVISSCVS-KGYVFQMEMIVRACRKGY-HIEEVPI  211 (242)
Q Consensus       166 ~g~~~~~rr~~~~~~~~~~~~-~~~~~d~~~~~~~~~~g~-~i~~~p~  211 (242)
                      .|+++++||++++++|++++. ....+|.+++.++.+.|+ ++.+++.
T Consensus       156 ~g~~~~~rr~~~~~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~  203 (229)
T cd04192         156 NGANMAYRKEAFFEVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKN  203 (229)
T ss_pred             ccceEEEEHHHHHHhcCCccccccccCCHHHHHHHHHhCCCCEEEeeC
Confidence            577789999999999999764 456789999999999999 8888753

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=99.97  E-value=7.2e-31  Score=196.25  Aligned_cols=197  Identities=20%  Similarity=0.233  Sum_probs=150.0

Q ss_pred             EEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           12 SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        12 siiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      |||||+||+++.+.++|+++.+|.. +++|||||||+|+|+|.++++++...     +.++...++.|++.|+|.|++.|
T Consensus         1 sivi~~~n~~~~l~~~l~sl~~q~~-~~~evivvDd~s~d~~~~~~~~~~~~-----~~~~~~~~~~g~~~a~n~~~~~a   74 (202)
T cd06433           1 SIITPTYNQAETLEETIDSVLSQTY-PNIEYIVIDGGSTDGTVDIIKKYEDK-----ITYWISEPDKGIYDAMNKGIALA   74 (202)
T ss_pred             CEEEeccchHHHHHHHHHHHHhCCC-CCceEEEEeCCCCccHHHHHHHhHhh-----cEEEEecCCcCHHHHHHHHHHHc
Confidence            6999999999999999999999965 56999999999999999999987543     34445567899999999999999


Q ss_pred             CCCEEEEEeCCCCCCCCChHHHHHHHH-hcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchh
Q 026146           92 SGSFVVIMDADLSHHPKYLPSFIKKQL-ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR  170 (242)
Q Consensus        92 ~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  170 (242)
                      +++|++++|+|+.+.++++.+++..+. .++.+++.|................    ......... .  ......++++
T Consensus        75 ~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~----~~~~~~~~~-~--~~~~~~~~~~  147 (202)
T cd06433          75 TGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRR----PPPFLDKFL-L--YGMPICHQAT  147 (202)
T ss_pred             CCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCC----CcchhhhHH-h--hcCcccCcce
Confidence            999999999999999999999995554 4578888887665433211111110    000010111 1  1122345566


Q ss_pred             hcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeee-ccCCCc
Q 026146          171 LYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVD-RVFGSS  221 (242)
Q Consensus       171 ~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~-~~~~~s  221 (242)
                      +++|++++++|++.+...+++|.++++++.+.|+++.++|....+ +.++.+
T Consensus       148 ~~~~~~~~~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~~~~~~~~~~s  199 (202)
T cd06433         148 FFRRSLFEKYGGFDESYRIAADYDLLLRLLLAGKIFKYLPEVLAAFRLGGVS  199 (202)
T ss_pred             EEEHHHHHHhCCCchhhCchhhHHHHHHHHHcCCceEecchhhhhheecCCc
Confidence            899999999988877777889999999999999999999987765 444443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PRK10063 putative glycosyl transferase; Provisional

Probab=99.97  E-value=3.3e-30  Score=197.87  Aligned_cols=202  Identities=18%  Similarity=0.264  Sum_probs=146.7

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhc--CCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~--~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      |.||||||+||+++.|+++|+|+.++..  ..++|||||||||+|+|.++++++.+..   +++++..+ +.|.+.|+|.
T Consensus         1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~---~i~~i~~~-~~G~~~A~N~   76 (248)
T PRK10063          1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIF---NLRFVSEP-DNGIYDAMNK   76 (248)
T ss_pred             CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccC---CEEEEECC-CCCHHHHHHH
Confidence            5799999999999999999999987543  2579999999999999999999875432   47777755 6699999999


Q ss_pred             HHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccc
Q 026146           87 GLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLT  166 (242)
Q Consensus        87 g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (242)
                      |++.|+||||+|+|+|+.+.|+.++.+.....+++.++++|.......+..  ...+.. ...  ..   ... .. ...
T Consensus        77 Gi~~a~g~~v~~ld~DD~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~--~~~~~~-~~~--~~---~~~-~~-~~~  146 (248)
T PRK10063         77 GIAMAQGRFALFLNSGDIFHQDAANFVRQLKMQKDNAMIIGDALLDFGDGH--KIKRSA-KPG--WY---IYH-SL-PAS  146 (248)
T ss_pred             HHHHcCCCEEEEEeCCcccCcCHHHHHHHHHhCCCCeEEEeeeEEEcCCCc--EEEEcc-CCh--hH---Hhc-CC-CCC
Confidence            999999999999999999988876554443334466777777654322110  110000 000  00   000 11 122


Q ss_pred             cchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeee-ccCCCcccch
Q 026146          167 GSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVD-RVFGSSKLGG  225 (242)
Q Consensus       167 g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~-~~~~~s~~~~  225 (242)
                      +..++++++.++. ++|++...+.+|++++.++...|+++.++|..... +.+|.|....
T Consensus       147 ~~~~~~~~~~~~~-~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~~y~~~g~S~~~~  205 (248)
T PRK10063        147 HQAIFFPVSGLKK-WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLVSEFSMGGVSTTNN  205 (248)
T ss_pred             CcEEEEEHHHHhc-CCCCcccchHHhHHHHHHHHHcCCcEEEcCceeEEEeCCCCcCchH
Confidence            3445789998875 56777778889999999999999999999976654 7777776543

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=99.97  E-value=6.7e-31  Score=201.31  Aligned_cols=218  Identities=18%  Similarity=0.216  Sum_probs=155.8

Q ss_pred             cEEEEEeCcccc-ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHH
Q 026146           10 KYSIIIPTYNER-LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGL   88 (242)
Q Consensus        10 ~isiiip~~n~~-~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~   88 (242)
                      +||||||+||++ +.+.+||+++.+|+   ++|||||||+|+|++.+.+++...   ...+.++. .++.|++.|+|.|+
T Consensus         1 ~isVvIp~~ne~~~~l~~~l~sl~~q~---~~eiivvdd~s~d~~~~~l~~~~~---~~~~~v~~-~~~~g~~~a~n~g~   73 (235)
T cd06434           1 DVTVIIPVYDEDPDVFRECLRSILRQK---PLEIIVVTDGDDEPYLSILSQTVK---YGGIFVIT-VPHPGKRRALAEGI   73 (235)
T ss_pred             CeEEEEeecCCChHHHHHHHHHHHhCC---CCEEEEEeCCCChHHHHHHHhhcc---CCcEEEEe-cCCCChHHHHHHHH
Confidence            489999999999 99999999999986   679999999999999888754322   23455554 56889999999999


Q ss_pred             hhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhH-HHHHhHHHHH-HHHHhCCCccccc
Q 026146           89 KHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMR-KLTSRGANVL-AQTLLWPGVSDLT  166 (242)
Q Consensus        89 ~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~  166 (242)
                      +.+++||++|+|+|+.+++++|+++++.+.+++.+++.|.....+.....+.... .......... .............
T Consensus        74 ~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (235)
T cd06434          74 RHVTTDIVVLLDSDTVWPPNALPEMLKPFEDPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLS  153 (235)
T ss_pred             HHhCCCEEEEECCCceeChhHHHHHHHhccCCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHHHHHHhhCCCEEEcc
Confidence            9999999999999999999999999999986677777776554443211111111 1111110010 1111222345577


Q ss_pred             cchhhcchHHHHHhhhccc---------CCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch-HHHHHHHHH
Q 026146          167 GSFRLYKKSVLEDVISSCV---------SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG-SEIVEYLKG  234 (242)
Q Consensus       167 g~~~~~rr~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~-~~~~~~~~~  234 (242)
                      |+++++||++++++++...         ....+||.+++.++.+.|+++.++|....++....+-..+ ++..||.++
T Consensus       154 G~~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~~  231 (235)
T cd06434         154 GRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTETPENYKKFLKQQLRWSRS  231 (235)
T ss_pred             CcHHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEEcchhHHHHHHHhhhhhhc
Confidence            8899999999998754322         2457899999999999999999999877666544433222 344555443

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional

Probab=99.97  E-value=5e-30  Score=221.87  Aligned_cols=226  Identities=18%  Similarity=0.209  Sum_probs=161.7

Q ss_pred             CCCcEEEEEeCccccc-cHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCC-cchHHH
Q 026146            7 NKNKYSIIIPTYNERL-NIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKK-LGLGTA   83 (242)
Q Consensus         7 ~~~~isiiip~~n~~~-~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~-~g~~~a   83 (242)
                      ..|+|+|+||+|||+. .+++++.++.++.++ .++||+|+||||+|++.++++++       .++++..+.| .|+++|
T Consensus       258 ~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~~-------~v~yI~R~~n~~gKAGn  330 (852)
T PRK11498        258 LWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQEV-------GVKYIARPTHEHAKAGN  330 (852)
T ss_pred             CCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHHC-------CcEEEEeCCCCcchHHH
Confidence            4589999999999984 567899999888776 46999999999999998887765       5788876654 469999


Q ss_pred             HHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHH-hcCCcEEEEEEEeecCCccCchhh--HHHHH---hHHHHHHHHH
Q 026146           84 YIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL-ETGASIVTGTRYVRSGGVHGWNLM--RKLTS---RGANVLAQTL  157 (242)
Q Consensus        84 ~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~  157 (242)
                      +|.|++++++|||+++|+|++++++++++++..+. +++.++|.+.....+.+.....+.  .....   ..+.......
T Consensus       331 LN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~  410 (852)
T PRK11498        331 INNALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGN  410 (852)
T ss_pred             HHHHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHH
Confidence            99999999999999999999999999999998765 456666665444333221100000  00000   0001111111


Q ss_pred             hCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccc-hHHHHHHHHHHH
Q 026146          158 LWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLG-GSEIVEYLKGLL  236 (242)
Q Consensus       158 ~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~-~~~~~~~~~~~~  236 (242)
                      ...+...+.|+++++||++++++||+++. ...||.++++++.++||++.++|.........++-.. .++..||.++.+
T Consensus       411 ~~~~a~~~~Gs~aviRReaLeeVGGfd~~-titED~dlslRL~~~Gyrv~yl~~~~a~glaPesl~~~~~QR~RWarG~l  489 (852)
T PRK11498        411 DMWDATFFCGSCAVIRRKPLDEIGGIAVE-TVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMV  489 (852)
T ss_pred             HhhcccccccceeeeEHHHHHHhcCCCCC-ccCccHHHHHHHHHcCCEEEEEeccceeEECCCCHHHHHHHHHHHHHHHH
Confidence            11122335678889999999999998765 5689999999999999999999866655333333322 366778888877


Q ss_pred             HHhh
Q 026146          237 YLLI  240 (242)
Q Consensus       237 ~~~~  240 (242)
                      +++.
T Consensus       490 Qi~r  493 (852)
T PRK11498        490 QIFR  493 (852)
T ss_pred             HHHH
Confidence            7654

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=99.97  E-value=1.6e-30  Score=194.84  Aligned_cols=174  Identities=22%  Similarity=0.233  Sum_probs=147.4

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-   91 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-   91 (242)
                      ||||+||+++.|.++|+||.+|.. +.+|||||||||+|+|.++++++....+   ++++..+.|.|.+.++|.|++.+ 
T Consensus         1 viI~~~n~~~~l~~~l~sl~~q~~-~~~eiiivD~~s~d~t~~~~~~~~~~~~---i~~~~~~~n~g~~~~~n~~~~~a~   76 (202)
T cd04185           1 AVVVTYNRLDLLKECLDALLAQTR-PPDHIIVIDNASTDGTAEWLTSLGDLDN---IVYLRLPENLGGAGGFYEGVRRAY   76 (202)
T ss_pred             CEEEeeCCHHHHHHHHHHHHhccC-CCceEEEEECCCCcchHHHHHHhcCCCc---eEEEECccccchhhHHHHHHHHHh
Confidence            689999999999999999999965 4679999999999999999998865433   78888899999999999999976 


Q ss_pred             --CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccch
Q 026146           92 --SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSF  169 (242)
Q Consensus        92 --~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  169 (242)
                        ++||++|+|+|+.+++++++++++.+.+++.+++.+.....+.                               ..++
T Consensus        77 ~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~  125 (202)
T cd04185          77 ELGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-------------------------------SFVG  125 (202)
T ss_pred             ccCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-------------------------------ceEE
Confidence              6899999999999999999999999986677777766554321                               2344


Q ss_pred             hhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcc
Q 026146          170 RLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSK  222 (242)
Q Consensus       170 ~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~  222 (242)
                      ++++|++++++|++.+ ...++||.+|+.++.+.|+++ ++|...++|..+.+.
T Consensus       126 ~~~~~~~~~~~g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~~  178 (202)
T cd04185         126 VLISRRVVEKIGLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVHKTAINK  178 (202)
T ss_pred             EEEeHHHHHHhCCCChhhhccchHHHHHHHHHHcCCcE-EecceEEEEcccccc
Confidence            5899999999987755 456789999999999999999 999888777766544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=99.97  E-value=1.4e-30  Score=206.38  Aligned_cols=213  Identities=24%  Similarity=0.259  Sum_probs=165.0

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHH
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHG   87 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g   87 (242)
                      ++++++||++||..+.+.+||+++.+|+.+ ..++++|||+|+|++.+.++...    .+++.++.+++|.|.+++.|.|
T Consensus         2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~-~~~iv~vDn~s~d~~~~~~~~~~----~~~v~~i~~~~NlG~agg~n~g   76 (305)
T COG1216           2 MPKISIIIVTYNRGEDLVECLASLAAQTYP-DDVIVVVDNGSTDGSLEALKARF----FPNVRLIENGENLGFAGGFNRG   76 (305)
T ss_pred             CcceEEEEEecCCHHHHHHHHHHHhcCCCC-CcEEEEccCCCCCCCHHHHHhhc----CCcEEEEEcCCCccchhhhhHH
Confidence            579999999999999999999999999764 45666899999999999888642    2489999999999999999999


Q ss_pred             HhhcCCC---EEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHh-H-HHHHHHH------
Q 026146           88 LKHASGS---FVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSR-G-ANVLAQT------  156 (242)
Q Consensus        88 ~~~a~~d---~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~------  156 (242)
                      ++.|.++   |+++||+|..+++++++++++.+++.+..++++......++............. . .......      
T Consensus        77 ~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (305)
T COG1216          77 IKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPD  156 (305)
T ss_pred             HHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheeccccccccccceeccccccccc
Confidence            9999654   999999999999999999999999888888887766653321111100000000 0 0000000      


Q ss_pred             -HhCCCc-cccccchhhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch
Q 026146          157 -LLWPGV-SDLTGSFRLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG  225 (242)
Q Consensus       157 -~~~~~~-~~~~g~~~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~  225 (242)
                       .....+ .++.|+++++++++++++|++++ .+.+.||.|+|.|+.++|+++.++|.+.+.|..+.+....
T Consensus       157 ~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s~~~~  228 (305)
T COG1216         157 LSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYYEDVDLCLRARKAGYKIYYVPDAIIYHKIGSSKGSS  228 (305)
T ss_pred             ccchhhhhhhcceeeeEEcHHHHHHhCCCCcccceeehHHHHHHHHHHcCCeEEEeeccEEEEeccCCCCCC
Confidence             000111 14789999999999999999866 6777999999999999999999999999999888877543

>PRK10018 putative glycosyl transferase; Provisional

Probab=99.97  E-value=1.3e-29  Score=196.97  Aligned_cols=207  Identities=15%  Similarity=0.137  Sum_probs=146.6

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      .++|.||||||+||+++.+.++|+|+.+|+. +++|||||||||++  .+.++++......++++++.++.|.|.+.|+|
T Consensus         2 ~~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~-~~~EiIVVDDgS~~--~~~~~~~~~~~~~~ri~~i~~~~n~G~~~a~N   78 (279)
T PRK10018          2 KDNPLISIYMPTWNRQQLAIRAIKSVLRQDY-SNWEMIIVDDCSTS--WEQLQQYVTALNDPRITYIHNDINSGACAVRN   78 (279)
T ss_pred             CCCCEEEEEEEeCCCHHHHHHHHHHHHhCCC-CCeEEEEEECCCCC--HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHH
Confidence            3568999999999999999999999999965 68999999999984  56677776655556899999999999999999


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccCchhh-HHHHHhHHHHHHHHHhCCCcc
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHGWNLM-RKLTSRGANVLAQTLLWPGVS  163 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  163 (242)
                      .|++.|+|+||+|+|+|+.+.|+.++.+++.+.+ ...+++++......+........ .......  .....+...+  
T Consensus        79 ~gi~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~n--  154 (279)
T PRK10018         79 QAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSP--YSRRLFYKRN--  154 (279)
T ss_pred             HHHHHcCCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecCcccccccccCCCCCCC--CCHHHHHHhc--
Confidence            9999999999999999999999999999998876 45566666533222111000000 0000000  0000011111  


Q ss_pred             ccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeee-eeeccCCCc
Q 026146          164 DLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPIT-FVDRVFGSS  221 (242)
Q Consensus       164 ~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~-~~~~~~~~s  221 (242)
                       ..|+..++++..+.. +++++....++|++|++|+...|.....+|.+ ..+|..+.|
T Consensus       155 -~ig~~~~~~~~~~~~-~~fd~~~~~~eDydlwlrl~~~~~~~~~~~~~l~~y~~~~~s  211 (279)
T PRK10018        155 -IIGNQVFTWAWRFKE-CLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGE  211 (279)
T ss_pred             -CcCceeeehhhhhhh-cccCCCCCccccHHHHHHHHHhcCceEeeccceEEEEcCCCC
Confidence             123333455555554 45777788899999999999999988888865 345554443

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=99.97  E-value=1.6e-29  Score=219.51  Aligned_cols=230  Identities=17%  Similarity=0.257  Sum_probs=163.5

Q ss_pred             CCCcEEEEEeCccccccH-HHHHHHHHhhhcC-CCeEEEEEeCCCCCCh--------------HHHHHHHHHHhCCCcEE
Q 026146            7 NKNKYSIIIPTYNERLNI-ALIVYLIFKHLRD-VDFEIIVVDDGSPDGT--------------QEVVKQLQQLYGEDRIL   70 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l-~~~l~sl~~~~~~-~~~eiivvd~~s~d~t--------------~~~l~~~~~~~~~~~~~   70 (242)
                      ..|+|+|+||+|||+..+ +.++.++.++.++ .++||+||||||+|+|              .+.+++++++.   .+.
T Consensus       129 ~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~---~v~  205 (713)
T TIGR03030       129 EWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKL---GVN  205 (713)
T ss_pred             cCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHc---CcE
Confidence            458899999999998655 6799999988776 4799999999999987              34566666654   588


Q ss_pred             EeeCCCCc-chHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccCc--hhhHHHH
Q 026146           71 LRPRPKKL-GLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHGW--NLMRKLT  146 (242)
Q Consensus        71 ~~~~~~~~-g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~--~~~~~~~  146 (242)
                      ++..+.|. +|++++|.|++++++||++++|+|+.++|+++++++..+.+ ++..++.+.....+.+....  .......
T Consensus       206 yi~r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~nl~~~~~~~  285 (713)
T TIGR03030       206 YITRPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERNLGTFRRMP  285 (713)
T ss_pred             EEECCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhhhHHHHHhh
Confidence            88877664 58999999999999999999999999999999999999864 45555555443332221100  1111111


Q ss_pred             H---hHHHHHHHHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCccc
Q 026146          147 S---RGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKL  223 (242)
Q Consensus       147 ~---~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~  223 (242)
                      .   .............+...+.|+++++||++++++||+.. ....||.+++.++.++|+++.++|.+..+...+.+-.
T Consensus       286 ~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~iGGf~~-~~vtED~~l~~rL~~~G~~~~y~~~~~~~g~~p~sl~  364 (713)
T TIGR03030       286 NENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEIGGIAG-ETVTEDAETALKLHRRGWNSAYLDRPLIAGLAPETLS  364 (713)
T ss_pred             hHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHcCCCCC-CCcCcHHHHHHHHHHcCCeEEEeccccccccCCCCHH
Confidence            0   00111111111112233567788999999999999865 3468999999999999999999998877655444432


Q ss_pred             c-hHHHHHHHHHHHHHhh
Q 026146          224 G-GSEIVEYLKGLLYLLI  240 (242)
Q Consensus       224 ~-~~~~~~~~~~~~~~~~  240 (242)
                      . .++..||.++.++.+.
T Consensus       365 ~~~~Qr~RWa~G~~qi~~  382 (713)
T TIGR03030       365 GHIGQRIRWAQGMMQIFR  382 (713)
T ss_pred             HHHHHHHHHhcChHHHHh
Confidence            2 3667778777776654

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=99.97  E-value=2.3e-30  Score=195.46  Aligned_cols=205  Identities=20%  Similarity=0.211  Sum_probs=151.4

Q ss_pred             EEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           12 SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        12 siiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      |||||+||+++.|.++|+|+.+|.. +++|||||||||+|+|.++++++.+.+| ..+.++....|.|.+.++|.|+..+
T Consensus         1 sIvIp~yn~~~~l~~~l~sl~~q~~-~~~eiiVvddgS~d~t~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~n~g~~~~   78 (214)
T cd04196           1 AVLMATYNGEKYLREQLDSILAQTY-KNDELIISDDGSTDGTVEIIKEYIDKDP-FIIILIRNGKNLGVARNFESLLQAA   78 (214)
T ss_pred             CEEEEecCcHHHHHHHHHHHHhCcC-CCeEEEEEeCCCCCCcHHHHHHHHhcCC-ceEEEEeCCCCccHHHHHHHHHHhC
Confidence            6999999999999999999999976 4899999999999999999999988775 4678888889999999999999999


Q ss_pred             CCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCc--cCchhhHHHHHhHHHHHHHHHhCCCccccccc
Q 026146           92 SGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGV--HGWNLMRKLTSRGANVLAQTLLWPGVSDLTGS  168 (242)
Q Consensus        92 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  168 (242)
                      ++||++|+|+|+.++|+++..+++.+.+ +..+++.+.......+.  .......................   ....|+
T Consensus        79 ~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  155 (214)
T cd04196          79 DGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTSFNNLLFQ---NVVTGC  155 (214)
T ss_pred             CCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccccccCCccCHHHHHHh---CccCCc
Confidence            9999999999999999999999998554 44555555443322211  11111100000000011111111   123567


Q ss_pred             hhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeee-eeccCCCcc
Q 026146          169 FRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITF-VDRVFGSSK  222 (242)
Q Consensus       169 ~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~-~~~~~~~s~  222 (242)
                      ++++||+++++++++.+...+.+|.++..++.. +.++.++|... .+|.++.+.
T Consensus       156 ~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~  209 (214)
T cd04196         156 TMAFNRELLELALPFPDADVIMHDWWLALLASA-FGKVVFLDEPLILYRQHGNNV  209 (214)
T ss_pred             eeeEEHHHHHhhccccccccccchHHHHHHHHH-cCceEEcchhHHHHhcccccc
Confidence            779999999999888666577889988888877 66899998654 445655554

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=99.97  E-value=1.7e-29  Score=186.52  Aligned_cols=184  Identities=43%  Similarity=0.693  Sum_probs=150.9

Q ss_pred             EEEeCccccccHHHHHHHHHhhhc-CCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLR-DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~-~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      ||||+||+++.+.++|+++.+|.. ...+|||||||+|+|+|.++++++.+..+  .++++..++|.|++.|+|.|++.|
T Consensus         1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~--~~~~~~~~~n~G~~~a~n~g~~~a   78 (185)
T cd04179           1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVP--RVRVIRLSRNFGKGAAVRAGFKAA   78 (185)
T ss_pred             CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCC--CeEEEEccCCCCccHHHHHHHHHh
Confidence            689999999999999999999975 25799999999999999999999887765  568888999999999999999999


Q ss_pred             CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhh
Q 026146           92 SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRL  171 (242)
Q Consensus        92 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  171 (242)
                      ++||++|+|+|+.+.|++|++++..+.+.+.++++|.+...... .........................+....|++++
T Consensus        79 ~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (185)
T cd04179          79 RGDIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGSRFVRGGG-AGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRL  157 (185)
T ss_pred             cCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeecCCCc-ccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceee
Confidence            99999999999999999999999997777899999988765543 22344444444444444444456667778889999


Q ss_pred             cchHHHHHhhhcccCCCcccchHHHHHH
Q 026146          172 YKKSVLEDVISSCVSKGYVFQMEMIVRA  199 (242)
Q Consensus       172 ~rr~~~~~~~~~~~~~~~~~d~~~~~~~  199 (242)
                      +||++++++++.....+|.+|.++++|+
T Consensus       158 ~~r~~~~~i~~~~~~~~~~~~~~~~~~~  185 (185)
T cd04179         158 FRREVLEALLSLLESNGFEFGLELLVGA  185 (185)
T ss_pred             eHHHHHHHHHhhccccCcceeeEeeecC
Confidence            9999999996444566677777777663

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=99.97  E-value=2.9e-30  Score=198.05  Aligned_cols=200  Identities=20%  Similarity=0.185  Sum_probs=143.2

Q ss_pred             EEEeCcccc-ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           13 IIIPTYNER-LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        13 iiip~~n~~-~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      +|||+||+. +.+.+||+|+.+|    ..|||||||+|+|.+....+.     +...+.++..++|.|++.|+|.|++.|
T Consensus         1 ~vI~~yn~~~~~l~~~l~sl~~q----~~~iivvDn~s~~~~~~~~~~-----~~~~i~~i~~~~n~G~~~a~N~g~~~a   71 (237)
T cd02526           1 AVVVTYNPDLSKLKELLAALAEQ----VDKVVVVDNSSGNDIELRLRL-----NSEKIELIHLGENLGIAKALNIGIKAA   71 (237)
T ss_pred             CEEEEecCCHHHHHHHHHHHhcc----CCEEEEEeCCCCccHHHHhhc-----cCCcEEEEECCCceehHHhhhHHHHHH
Confidence            589999999 9999999999987    459999999998877655443     234788999999999999999999999


Q ss_pred             CC---CEEEEEeCCCCCCCCChHHHH---HHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHH-HHHHHHhCCCccc
Q 026146           92 SG---SFVVIMDADLSHHPKYLPSFI---KKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGAN-VLAQTLLWPGVSD  164 (242)
Q Consensus        92 ~~---d~i~~lD~D~~~~~~~l~~l~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  164 (242)
                      ++   ||++|+|+|+.++|+++++++   ....+++...++++............... ....... .............
T Consensus        72 ~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  150 (237)
T cd02526          72 LENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGVR-KSGYKLRIQKEGEEGLKEVDF  150 (237)
T ss_pred             HhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeecccee-ccCccceecccccCCceEeee
Confidence            87   999999999999999999995   44433344445554443322111100000 0000000 0000000112233


Q ss_pred             cccchhhcchHHHHHhhhcccCC-CcccchHHHHHHHHcCCceEEeeeeeeeccCCCcc
Q 026146          165 LTGSFRLYKKSVLEDVISSCVSK-GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSK  222 (242)
Q Consensus       165 ~~g~~~~~rr~~~~~~~~~~~~~-~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~  222 (242)
                      ..++++++||++++++|++++.. ..++|.+|+.|+.+.|+++.++|.+.++|..+.+.
T Consensus       151 ~~~~~~~~rr~~~~~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~~  209 (237)
T cd02526         151 LITSGSLISLEALEKVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLKHELGDKR  209 (237)
T ss_pred             eeccceEEcHHHHHHhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEEecccCcc
Confidence            45667789999999999987654 33689999999999999999999999888877765

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

Probab=99.97  E-value=8.3e-29  Score=187.97  Aligned_cols=184  Identities=22%  Similarity=0.252  Sum_probs=135.5

Q ss_pred             EEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhh
Q 026146           11 YSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKH   90 (242)
Q Consensus        11 isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~   90 (242)
                      ||||||+||+++.+.++|+++.+|.. ..+|||||||+|+|++.+.+++       ..+.++..  +.|++.++|.|++.
T Consensus         1 vsvii~~~n~~~~l~~~l~sl~~q~~-~~~evivvdd~s~d~~~~~~~~-------~~~~~~~~--~~g~~~a~n~g~~~   70 (221)
T cd02522           1 LSIIIPTLNEAENLPRLLASLRRLNP-LPLEIIVVDGGSTDGTVAIARS-------AGVVVISS--PKGRARQMNAGAAA   70 (221)
T ss_pred             CEEEEEccCcHHHHHHHHHHHHhccC-CCcEEEEEeCCCCccHHHHHhc-------CCeEEEeC--CcCHHHHHHHHHHh
Confidence            68999999999999999999999975 6789999999999999988876       24666553  56899999999999


Q ss_pred             cCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchh
Q 026146           91 ASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR  170 (242)
Q Consensus        91 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  170 (242)
                      ++++|++|+|+|+.++++++++++..+.+.+..++.........+ ..   ......   ..... ..... ....+.++
T Consensus        71 a~~~~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~---~~~~~-~~~~~-~~~~~~~~  141 (221)
T cd02522          71 ARGDWLLFLHADTRLPPDWDAAIIETLRADGAVAGAFRLRFDDPG-PR---LRLLEL---GANLR-SRLFG-LPYGDQGL  141 (221)
T ss_pred             ccCCEEEEEcCCCCCChhHHHHHHHHhhcCCcEEEEEEeeecCCc-cc---hhhhhh---cccce-ecccC-CCcCCceE
Confidence            999999999999999999999997776554443333332222221 11   110000   00000 00111 12234567


Q ss_pred             hcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeee
Q 026146          171 LYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVD  215 (242)
Q Consensus       171 ~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~  215 (242)
                      ++||++++++|++++.. +.||++|+.|+.+.|+++.+ |...+.
T Consensus       142 ~~r~~~~~~~G~fd~~~-~~ED~d~~~r~~~~G~~~~~-~~~~~~  184 (221)
T cd02522         142 FIRRELFEELGGFPELP-LMEDVELVRRLRRRGRPALL-PSPVTT  184 (221)
T ss_pred             EEEHHHHHHhCCCCccc-cccHHHHHHHHHhCCCEEEc-Cceeee
Confidence            89999999999998777 88999999999999998876 654443

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=99.96  E-value=4.2e-28  Score=178.60  Aligned_cols=178  Identities=31%  Similarity=0.462  Sum_probs=147.0

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhh
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKH   90 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~   90 (242)
                      ||||+||+++.+.++++++.++..+  ..+|||||||||+|+|.++++.+.+.++  ++.++...+|.|++.|+|.|++.
T Consensus         1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~--~i~~i~~~~n~G~~~a~n~g~~~   78 (181)
T cd04187           1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDP--RVKVIRLSRNFGQQAALLAGLDH   78 (181)
T ss_pred             CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCC--CEEEEEecCCCCcHHHHHHHHHh
Confidence            6899999999999999999887653  5789999999999999999999877755  68888888899999999999999


Q ss_pred             cCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchh
Q 026146           91 ASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR  170 (242)
Q Consensus        91 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  170 (242)
                      +++||++++|+|+.+++++++++++.+ +.+.+++.|.+....     ..+....................+....++++
T Consensus        79 a~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (181)
T cd04187          79 ARGDAVITMDADLQDPPELIPEMLAKW-EEGYDVVYGVRKNRK-----ESWLKRLTSKLFYRLINKLSGVDIPDNGGDFR  152 (181)
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHH-hCCCcEEEEEecCCc-----chHHHHHHHHHHHHHHHHHcCCCCCCCCCCEE
Confidence            999999999999999999999999985 457888888766543     13333333333333444445566777888888


Q ss_pred             hcchHHHHHhhhcccCCCcccchHHHHH
Q 026146          171 LYKKSVLEDVISSCVSKGYVFQMEMIVR  198 (242)
Q Consensus       171 ~~rr~~~~~~~~~~~~~~~~~d~~~~~~  198 (242)
                      ++||++++++|++++...|..+++++++
T Consensus       153 ~~~r~~~~~i~~~d~~~~~~~~~~~~~~  180 (181)
T cd04187         153 LMDRKVVDALLLLPERHRFLRGLIAWVG  180 (181)
T ss_pred             EEcHHHHHHHHhcCCCCccHHHHHHHhc
Confidence            9999999999999999999888777653

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional

Probab=99.96  E-value=9.5e-28  Score=189.00  Aligned_cols=225  Identities=22%  Similarity=0.293  Sum_probs=155.2

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhc-CCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEe-eCCCCcchHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLR-DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR-PRPKKLGLGTA   83 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~-~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~-~~~~~~g~~~a   83 (242)
                      +..+++|||||+||+++.|.++++++.+|.. ...+|||||||||+|+|.++++++....-. ....+ ..+.|.|++.|
T Consensus        28 ~~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~-~~~~~~~~~~n~Gkg~A  106 (306)
T PRK13915         28 KAGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVS-REEILPELPPRPGKGEA  106 (306)
T ss_pred             cCCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhc-chhhhhccccCCCHHHH
Confidence            3568999999999999999999999998865 345799999999999999999887432110 11111 23678899999


Q ss_pred             HHHHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHH-hcCCcEEEEEEEeec--CC----ccCchhhHHHHHhHHHHHHH
Q 026146           84 YIHGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQL-ETGASIVTGTRYVRS--GG----VHGWNLMRKLTSRGANVLAQ  155 (242)
Q Consensus        84 ~n~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~  155 (242)
                      +|.|+..+++||++|+|+|+. ++|+++.++++.+. +++.+++.|......  .+    ..+....+.......+....
T Consensus       107 ~~~g~~~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~~~~~~~~~gr~~~~~~~~l~~~~~~  186 (306)
T PRK13915        107 LWRSLAATTGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVSGGVDATGGGRVTELVARPLLNLLRP  186 (306)
T ss_pred             HHHHHHhcCCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccccccCcCCCCchHHHHHHHHHHHHHH
Confidence            999999999999999999997 89999999999986 567888887422211  00    00111111111212221111


Q ss_pred             HHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHH-HcCC-ceEEeeeeeeeccCCCcccchHHHHHHHH
Q 026146          156 TLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRAC-RKGY-HIEEVPITFVDRVFGSSKLGGSEIVEYLK  233 (242)
Q Consensus       156 ~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~-~~g~-~i~~~p~~~~~~~~~~s~~~~~~~~~~~~  233 (242)
                      .+  ..+.+..+|++++||++++++. +  ..+|+.+.++...+. +.|+ ++..++.....|.+.    +.....+...
T Consensus       187 ~l--~~i~dp~sG~~a~rr~~l~~l~-~--~~~yg~e~~~l~~~~~~~g~~~i~~V~l~~r~h~~~----~~~~~~~m~~  257 (306)
T PRK13915        187 EL--AGFVQPLGGEYAGRRELLESLP-F--VPGYGVEIGLLIDTLDRLGLDAIAQVDLGVRAHRNQ----PLRALGRMAR  257 (306)
T ss_pred             hh--hcccCcchHhHHHHHHHHHhCC-C--CCCCeehHHHHHHHHHHhCcCceEEEEecccccCCC----CHHHHHHHHH
Confidence            11  2345566777899999999883 3  345777899999887 4687 788888665555431    3445555555


Q ss_pred             HHHHHhh
Q 026146          234 GLLYLLI  240 (242)
Q Consensus       234 ~~~~~~~  240 (242)
                      .+++.++
T Consensus       258 ~i~~~~~  264 (306)
T PRK13915        258 QIIATAL  264 (306)
T ss_pred             HHHHHHH
Confidence            5555544

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=99.96  E-value=2.4e-28  Score=177.12  Aligned_cols=164  Identities=26%  Similarity=0.423  Sum_probs=142.1

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      |+||+||+.+.+.++++++.+|.. +.++|+|+||||++++.+.+++..     ..+.++..+.+.|++.|+|.|++.++
T Consensus         1 vii~~~~~~~~l~~~l~sl~~~~~-~~~~iiivdd~s~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~a~n~~~~~~~   74 (166)
T cd04186           1 IIIVNYNSLEYLKACLDSLLAQTY-PDFEVIVVDNASTDGSVELLRELF-----PEVRLIRNGENLGFGAGNNQGIREAK   74 (166)
T ss_pred             CEEEecCCHHHHHHHHHHHHhccC-CCeEEEEEECCCCchHHHHHHHhC-----CCeEEEecCCCcChHHHhhHHHhhCC
Confidence            689999999999999999999865 678999999999999999888762     25888888889999999999999999


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhhc
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLY  172 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  172 (242)
                      ++|++|+|+|+.+++++++.+++.+.+.+...+++..                                   ..|+++++
T Consensus        75 ~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~  119 (166)
T cd04186          75 GDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK-----------------------------------VSGAFLLV  119 (166)
T ss_pred             CCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-----------------------------------CceeeEee
Confidence            9999999999999999999999987665433333333                                   56788899


Q ss_pred             chHHHHHhhhcccC-CCcccchHHHHHHHHcCCceEEeeeeeeecc
Q 026146          173 KKSVLEDVISSCVS-KGYVFQMEMIVRACRKGYHIEEVPITFVDRV  217 (242)
Q Consensus       173 rr~~~~~~~~~~~~-~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~  217 (242)
                      ++++++++|++.+. ..+++|.+|+.++.+.|+++.++|...++|.
T Consensus       120 ~~~~~~~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~~h~  165 (166)
T cd04186         120 RREVFEEVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQAVIYHH  165 (166)
T ss_pred             eHHHHHHcCCCChhhhccccHHHHHHHHHHcCCeEEEccceEEEec
Confidence            99999999888664 3478999999999999999999998877764

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=99.96  E-value=2.8e-28  Score=179.65  Aligned_cols=178  Identities=19%  Similarity=0.315  Sum_probs=139.6

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      ||||+||+.+.++++|+++.+|+. .++||||+||+|+|+|.++++++.+..+...+.+...+.+.|++.++|.|++.++
T Consensus         1 ivip~~n~~~~l~~~l~sl~~q~~-~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~a~   79 (182)
T cd06420           1 LIITTYNRPEALELVLKSVLNQSI-LPFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAAAK   79 (182)
T ss_pred             CEEeecCChHHHHHHHHHHHhccC-CCCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHHhc
Confidence            689999999999999999999864 5789999999999999999998876544223444455556789999999999999


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhhc
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLY  172 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  172 (242)
                      ++|++|+|+|+.+++++++++++.+ + +..++.|.+.........                        ....|+++++
T Consensus        80 g~~i~~lD~D~~~~~~~l~~~~~~~-~-~~~~v~g~~~~~~~~~~~------------------------~~~~~~~~~~  133 (182)
T cd06420          80 GDYLIFIDGDCIPHPDFIADHIELA-E-PGVFLSGSRVLLNEKLTE------------------------RGIRGCNMSF  133 (182)
T ss_pred             CCEEEEEcCCcccCHHHHHHHHHHh-C-CCcEEecceeecccccce------------------------eEeccceEEE
Confidence            9999999999999999999999887 3 344555655543322110                        3345667788


Q ss_pred             chHHHHHhhhcccCCC-c-ccchHHHHHHHHcCCceEEee-eeeeecc
Q 026146          173 KKSVLEDVISSCVSKG-Y-VFQMEMIVRACRKGYHIEEVP-ITFVDRV  217 (242)
Q Consensus       173 rr~~~~~~~~~~~~~~-~-~~d~~~~~~~~~~g~~i~~~p-~~~~~~~  217 (242)
                      +|+.+.++|++.+... + .||.+++.|+.+.|++...+. .+.++|.
T Consensus       134 ~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h~  181 (182)
T cd06420         134 WKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFHL  181 (182)
T ss_pred             EHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeeec
Confidence            9999999999876543 2 699999999999997766664 6666653

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=1.4e-27  Score=198.98  Aligned_cols=228  Identities=27%  Similarity=0.313  Sum_probs=172.3

Q ss_pred             CCcEEEEEeCccccc-cHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC-CCCcchHHHHH
Q 026146            8 KNKYSIIIPTYNERL-NIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR-PKKLGLGTAYI   85 (242)
Q Consensus         8 ~~~isiiip~~n~~~-~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~-~~~~g~~~a~n   85 (242)
                      .|+++|+||+|||+. .++++++++.+|.+ +.+||++|||+|+|++.+++++..++++ ++++++.. ..+.|+++|.|
T Consensus        53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dy-p~~evivv~d~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~gK~~al~  130 (439)
T COG1215          53 LPKVSVIIPAYNEEPEVLEETLESLLSQDY-PRYEVIVVDDGSTDETYEILEELGAEYG-PNFRVIYPEKKNGGKAGALN  130 (439)
T ss_pred             CCceEEEEecCCCchhhHHHHHHHHHhCCC-CCceEEEECCCCChhHHHHHHHHHhhcC-cceEEEeccccCccchHHHH
Confidence            489999999999998 99999999999965 5799999999999999999999988874 34555543 56889999999


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHH----HHH-HHhCC
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANV----LAQ-TLLWP  160 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~  160 (242)
                      .|++.+++|+|+++|+|..++++++.+++..+.+++..++++.....+.... ..+...........    ... .....
T Consensus       131 ~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~g  209 (439)
T COG1215         131 NGLKRAKGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDP-SNLLGRIQAIEYLSAFYFRLRAASKGG  209 (439)
T ss_pred             HHHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCCh-hhhcchhcchhhhhhHHHhhhhhhhcC
Confidence            9999999999999999999999999999999987666656665444332211 11221111111111    111 11122


Q ss_pred             CccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccc-hHHHHHHHHHHHHHh
Q 026146          161 GVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLG-GSEIVEYLKGLLYLL  239 (242)
Q Consensus       161 ~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~  239 (242)
                      .+....|++.++||++++++|++ ......||.+++.++...|+++.++|.+..+-...++-.. +++..||.++.++.+
T Consensus       210 ~~~~~~G~~~~~rr~aL~~~g~~-~~~~i~ED~~lt~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~  288 (439)
T COG1215         210 LISFLSGSSSAFRRSALEEVGGW-LEDTITEDADLTLRLHLRGYRVVYVPEAIVWTEAPETLKELWRQRLRWARGGLQVL  288 (439)
T ss_pred             CeEEEcceeeeEEHHHHHHhCCC-CCCceeccHHHHHHHHHCCCeEEEeecceEeeeCcccHHHHHHHHHHHHcccceee
Confidence            35667888999999999999864 5667789999999999999999999988766555555433 367777777665544

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.96  E-value=2.2e-28  Score=177.38  Aligned_cols=167  Identities=28%  Similarity=0.452  Sum_probs=127.6

Q ss_pred             EEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           12 SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        12 siiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      |||||+||+.+.|.++|+|+.+| ....+|||||||||+|+|.++++++.+  ....++++..++|.|.+.++|.|++.|
T Consensus         1 Svvip~~n~~~~l~~~l~sl~~q-~~~~~eiivvdd~s~d~~~~~~~~~~~--~~~~i~~i~~~~n~g~~~~~n~~~~~a   77 (169)
T PF00535_consen    1 SVVIPTYNEAEYLERTLESLLKQ-TDPDFEIIVVDDGSTDETEEILEEYAE--SDPNIRYIRNPENLGFSAARNRGIKHA   77 (169)
T ss_dssp             EEEEEESS-TTTHHHHHHHHHHH-SGCEEEEEEEECS-SSSHHHHHHHHHC--CSTTEEEEEHCCCSHHHHHHHHHHHH-
T ss_pred             CEEEEeeCCHHHHHHHHHHHhhc-cCCCEEEEEeccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence            79999999999999999999999 336899999999999999999999877  235899999999999999999999999


Q ss_pred             CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHH--HHHhHHHHHHHHHhCCCccccccch
Q 026146           92 SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRK--LTSRGANVLAQTLLWPGVSDLTGSF  169 (242)
Q Consensus        92 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~  169 (242)
                      +++|++++|+|+.+.+++++++++.+++++.+++++.................  ......................+++
T Consensus        78 ~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (169)
T PF00535_consen   78 KGEYILFLDDDDIISPDWLEELVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSC  157 (169)
T ss_dssp             -SSEEEEEETTEEE-TTHHHHHHHHHHHCTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSC
T ss_pred             ceeEEEEeCCCceEcHHHHHHHHHHHHhCCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccE
Confidence            99999999999999999999999999998888888877765443211111110  0011111122222344455667888


Q ss_pred             hhcchHHHHHhh
Q 026146          170 RLYKKSVLEDVI  181 (242)
Q Consensus       170 ~~~rr~~~~~~~  181 (242)
                      +++||++++++|
T Consensus       158 ~~~rr~~~~~~~  169 (169)
T PF00535_consen  158 ALFRRSVFEEIG  169 (169)
T ss_dssp             EEEEEHHHHHCH
T ss_pred             EEEEHHHHHhhC
Confidence            899999999985

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>PRK14716 bacteriophage N4 adsorption protein B; Provisional

Probab=99.95  E-value=2.9e-26  Score=189.87  Aligned_cols=228  Identities=16%  Similarity=0.152  Sum_probs=157.2

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      +.|+++|+||+|||++.|.+++++++.+..++++||+|++|+|+|+|.+.++++.+++|...+.+...+...||+.|+|.
T Consensus        64 ~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~~~~gp~~Ka~aLN~  143 (504)
T PRK14716         64 PEKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIVPHDGPTSKADCLNW  143 (504)
T ss_pred             CCCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEeCCCCCCCHHHHHHH
Confidence            47899999999999999999999976554447899999999999999999999999888543334444444579999999


Q ss_pred             HHhhc------CC---CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHh--HHH---H
Q 026146           87 GLKHA------SG---SFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSR--GAN---V  152 (242)
Q Consensus        87 g~~~a------~~---d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~---~  152 (242)
                      |++.+      +|   |+++++|+|+.++|+.++.+...+  .+.+++.......+..  ...+.......  ...   .
T Consensus       144 ~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~--~~~~~VQ~pv~~~~~~--~~~~~ag~y~~ef~~~~~~~  219 (504)
T PRK14716        144 IYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL--PRHDFVQLPVFSLPRD--WGEWVAGTYMDEFAESHLKD  219 (504)
T ss_pred             HHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc--CCCCEEecceeccCCc--hhHHHHHHHHHHHHHHHHHH
Confidence            99764      45   999999999999999999766554  3456665443332211  11111111100  000   0


Q ss_pred             H-HHHHhCCCccccccchhhcchHHHHHh----hh-cccCCCcccchHHHHHHHHcCCceEEeeeeeee-----------
Q 026146          153 L-AQTLLWPGVSDLTGSFRLYKKSVLEDV----IS-SCVSKGYVFQMEMIVRACRKGYHIEEVPITFVD-----------  215 (242)
Q Consensus       153 ~-~~~~~~~~~~~~~g~~~~~rr~~~~~~----~~-~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~-----------  215 (242)
                      . .....+ ......|.++++||++++++    || ........||+++++++.+.|+++.++|.+..+           
T Consensus       220 l~~r~~LG-~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~  298 (504)
T PRK14716        220 LPVREALG-GLIPSAGVGTAFSRRALERLAAERGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEP  298 (504)
T ss_pred             HHHHHhcC-CccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCcchHHHHHHHHHHCCCEEEEeccccccccccccccccc
Confidence            1 111111 23345677889999999998    33 244668899999999999999999999987433           


Q ss_pred             ---ccC-CCc-ccchHHHHHHHHHH-HHHh
Q 026146          216 ---RVF-GSS-KLGGSEIVEYLKGL-LYLL  239 (242)
Q Consensus       216 ---~~~-~~s-~~~~~~~~~~~~~~-~~~~  239 (242)
                         +.. +.+ +...++..||..++ ++.|
T Consensus       299 v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~  328 (504)
T PRK14716        299 IATREFFPDTFKAAVRQKARWIYGIAFQGW  328 (504)
T ss_pred             ccccccCccCHHHHHHHHHHHHhchHHhhH
Confidence               111 122 12347778888775 4443

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=99.95  E-value=1.5e-27  Score=187.49  Aligned_cols=198  Identities=18%  Similarity=0.123  Sum_probs=137.7

Q ss_pred             eCccc-cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---
Q 026146           16 PTYNE-RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---   91 (242)
Q Consensus        16 p~~n~-~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---   91 (242)
                      +|||+ .+.|+++++++.+|.    .+||||||+|+++  +.++++.+..  +++++++.++|.|.++|+|.|++.|   
T Consensus         1 Vtyn~~~~~l~~~l~sl~~q~----~~iiVVDN~S~~~--~~~~~~~~~~--~~i~~i~~~~N~G~a~a~N~Gi~~a~~~   72 (281)
T TIGR01556         1 VTFNPDLEHLGELITSLPKQV----DRIIAVDNSPHSD--QPLKNARLRG--QKIALIHLGDNQGIAGAQNQGLDASFRR   72 (281)
T ss_pred             CccCccHHHHHHHHHHHHhcC----CEEEEEECcCCCc--HhHHHHhccC--CCeEEEECCCCcchHHHHHHHHHHHHHC
Confidence            58997 589999999999883    4899999999765  2233333333  4799999999999999999999998   


Q ss_pred             CCCEEEEEeCCCCCCCCChHHHHHHHHhcC-CcEEEEEEEeecCCccCchhhHHHHHhHHHHH-HHHHhC-CCccccccc
Q 026146           92 SGSFVVIMDADLSHHPKYLPSFIKKQLETG-ASIVTGTRYVRSGGVHGWNLMRKLTSRGANVL-AQTLLW-PGVSDLTGS  168 (242)
Q Consensus        92 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~  168 (242)
                      .+|||+++|+|+.+++++++.+++.+++.+ ...++|+......+....+..... ....... ...... .......++
T Consensus        73 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s  151 (281)
T TIGR01556        73 GVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAIHLD-GLLLRQISLDGLTTPQKTSFLISS  151 (281)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCceeec-ccceeeecccccCCceeccEEEcC
Confidence            689999999999999999999999987654 444555444332211111100000 0000000 000000 112222233


Q ss_pred             hhhcchHHHHHhhhcccCC-CcccchHHHHHHHHcCCceEEeeeeeeeccCCCcc
Q 026146          169 FRLYKKSVLEDVISSCVSK-GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSK  222 (242)
Q Consensus       169 ~~~~rr~~~~~~~~~~~~~-~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~  222 (242)
                      +++++|++++++|++++.. ...+|.|+|+|+.++|+++.++|.+.++|..|.+.
T Consensus       152 g~li~~~~~~~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~~~  206 (281)
T TIGR01556       152 GCLITREVYQRLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDIVLEHRIGDSK  206 (281)
T ss_pred             cceeeHHHHHHhCCccHhhcccchHHHHHHHHHHCCCEEEEeCCEEEEEecCCcc
Confidence            4589999999999887643 55789999999999999999999988888777653

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]

Probab=99.95  E-value=1.6e-26  Score=181.04  Aligned_cols=208  Identities=21%  Similarity=0.207  Sum_probs=146.0

Q ss_pred             EEEEeCccccc------cHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC---CCcchHH
Q 026146           12 SIIIPTYNERL------NIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP---KKLGLGT   82 (242)
Q Consensus        12 siiip~~n~~~------~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~---~~~g~~~   82 (242)
                      |||||++++..      .+..+|.++.++....++||||||++|++.+.+.++++.+...  ...++...   ...|.+.
T Consensus         1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~--~~~~i~~~~~~~~f~~a~   78 (281)
T PF10111_consen    1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNG--FIRYIRHEDNGEPFSRAK   78 (281)
T ss_pred             CEEEEecCCccchHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccC--ceEEEEcCCCCCCcCHHH
Confidence            79999999874      4666688887754557899999999999988788888777644  23244433   3469999


Q ss_pred             HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHH---HHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHH-HHHh
Q 026146           83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIK---KQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLA-QTLL  158 (242)
Q Consensus        83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  158 (242)
                      |+|.|++.|++|+|+|+|+|+.++|++++++++   .+.++...++..+........ ................. ....
T Consensus        79 arN~g~~~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~-~~~~~~~~~~~~~~~~~~~~~~  157 (281)
T PF10111_consen   79 ARNIGAKYARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEG-SEKFYSQFKNLWDHEFLESFIS  157 (281)
T ss_pred             HHHHHHHHcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEeeeeccchh-hHHHhhcchhcchHHHHHHHhh
Confidence            999999999999999999999999999999999   565544444444433332221 11111111000111111 1111


Q ss_pred             C----CCccccccchhhcchHHHHHhhhcccCC-Cc-ccchHHHHHHHHcCCceEEeeeeeeeccCCCcc
Q 026146          159 W----PGVSDLTGSFRLYKKSVLEDVISSCVSK-GY-VFQMEMIVRACRKGYHIEEVPITFVDRVFGSSK  222 (242)
Q Consensus       159 ~----~~~~~~~g~~~~~rr~~~~~~~~~~~~~-~~-~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~  222 (242)
                      .    .......|++++++|+.+.++||+++.+ ++ +||.||+.|+.+.|..+...|....+|.+..+.
T Consensus       158 ~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~~~~~  227 (281)
T PF10111_consen  158 GKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSHRWPI  227 (281)
T ss_pred             ccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhcccccCCCc
Confidence            1    1122345688899999999999998865 44 799999999999999999999887766554443

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis

Probab=99.94  E-value=3.8e-26  Score=168.42  Aligned_cols=172  Identities=23%  Similarity=0.240  Sum_probs=125.6

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      ||||+||+++.|.++|+++.+|.++ ..+|||||||+|+|+|.++++++     ...+.......+.|++.|+|.|++.+
T Consensus         1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~~-----~~~~~~~~~~~~~gk~~aln~g~~~a   75 (183)
T cd06438           1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARAA-----GATVLERHDPERRGKGYALDFGFRHL   75 (183)
T ss_pred             CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHHc-----CCeEEEeCCCCCCCHHHHHHHHHHHH
Confidence            6999999999999999999998764 46899999999999999988765     22344444567889999999999987


Q ss_pred             C-----CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHH---hHHHHHHHH-Hh-CCC
Q 026146           92 S-----GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTS---RGANVLAQT-LL-WPG  161 (242)
Q Consensus        92 ~-----~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~-~~~  161 (242)
                      .     +|+++++|+|+.++|+++..++..+.+ +.+++.|.....+.+.   ++......   ...+.+... .. -..
T Consensus        76 ~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~-~~~~v~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (183)
T cd06438          76 LNLADDPDAVVVFDADNLVDPNALEELNARFAA-GARVVQAYYNSKNPDD---SWITRLYAFAFLVFNRLRPLGRSNLGL  151 (183)
T ss_pred             HhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhh-CCCeeEEEEeeeCCcc---CHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            4     899999999999999999999999875 6678877665543221   22222211   111111111 11 122


Q ss_pred             ccccccchhhcchHHHHHhhhcccCCCcccchHH
Q 026146          162 VSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEM  195 (242)
Q Consensus       162 ~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~  195 (242)
                      ...+.|+++++||+++++ ||+. .....||++|
T Consensus       152 ~~~~~G~~~~~rr~~l~~-~g~~-~~~l~ED~~~  183 (183)
T cd06438         152 SCQLGGTGMCFPWAVLRQ-APWA-AHSLTEDLEF  183 (183)
T ss_pred             CeeecCchhhhHHHHHHh-CCCC-CCCcccccCC
Confidence            334568888999999999 6664 4566788764

The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan

Probab=99.94  E-value=1.7e-25  Score=171.76  Aligned_cols=222  Identities=14%  Similarity=0.133  Sum_probs=151.4

Q ss_pred             EEEEEeCcccccc-HHHHHHHHHh----hhcCCCeEEEEEeCCCCCChHH----HHHHHHHHhC-CCcEEEeeCCCCcc-
Q 026146           11 YSIIIPTYNERLN-IALIVYLIFK----HLRDVDFEIIVVDDGSPDGTQE----VVKQLQQLYG-EDRILLRPRPKKLG-   79 (242)
Q Consensus        11 isiiip~~n~~~~-l~~~l~sl~~----~~~~~~~eiivvd~~s~d~t~~----~l~~~~~~~~-~~~~~~~~~~~~~g-   79 (242)
                      +||+||+||++.. +.++|++..+    |.+.+.+||+|+||++++....    .+.++.++++ ..++++++...|.| 
T Consensus         1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~g~   80 (254)
T cd04191           1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENTGR   80 (254)
T ss_pred             CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCCCc
Confidence            6999999998876 7888888765    4333689999999987654321    2333555543 35788888888877 


Q ss_pred             hHHHHHHHHhh--cCCCEEEEEeCCCCCCCCChHHHHHHHH-hcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHH
Q 026146           80 LGTAYIHGLKH--ASGSFVVIMDADLSHHPKYLPSFIKKQL-ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQT  156 (242)
Q Consensus        80 ~~~a~n~g~~~--a~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (242)
                      +++++|.++..  +++|||+++|+|..++|++|.+++..+. +++.++|.+.....+..    ++...............
T Consensus        81 Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~----~~~~~~~~~~~~~~~~~  156 (254)
T cd04191          81 KAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAE----TLFARLQQFANRLYGPV  156 (254)
T ss_pred             cHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCC----CHHHHHHHHHHHHHHHH
Confidence            67888888876  6789999999999999999999999996 55677777655444432    33333332111111110


Q ss_pred             ------HhCCCccccccchhhcchHHHHHhhhccc--------CCCcccchHHHHHHHHcCCceEEeeeeee-eccCCCc
Q 026146          157 ------LLWPGVSDLTGSFRLYKKSVLEDVISSCV--------SKGYVFQMEMIVRACRKGYHIEEVPITFV-DRVFGSS  221 (242)
Q Consensus       157 ------~~~~~~~~~~g~~~~~rr~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~g~~i~~~p~~~~-~~~~~~s  221 (242)
                            .-..+...+.|.++++||++++++++++.        .....||+++.+++.++||++.+.|.... +-..+.+
T Consensus       157 ~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~~~~~~~p~~  236 (254)
T cd04191         157 FGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLEGSYEECPPT  236 (254)
T ss_pred             HHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCcceEeECCCC
Confidence                  00123345668889999999999643321        34578999999999999999999997653 3222333


Q ss_pred             c-cchHHHHHHHHHHH
Q 026146          222 K-LGGSEIVEYLKGLL  236 (242)
Q Consensus       222 ~-~~~~~~~~~~~~~~  236 (242)
                      - .-+++..||.++.+
T Consensus       237 ~~~~~~qr~RW~~G~~  252 (254)
T cd04191         237 LIDFLKRDRRWCQGNL  252 (254)
T ss_pred             HHHHHHHHHHHHhhcC
Confidence            2 23466777776644

Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin

Probab=99.94  E-value=1.7e-26  Score=177.60  Aligned_cols=196  Identities=16%  Similarity=0.117  Sum_probs=138.7

Q ss_pred             EEEeCcccc-ccHHHHHHHHHhhhcC---------CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146           13 IIIPTYNER-LNIALIVYLIFKHLRD---------VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGT   82 (242)
Q Consensus        13 iiip~~n~~-~~l~~~l~sl~~~~~~---------~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~   82 (242)
                      ||||+||++ ..|+++|+|+.+|.++         ..+|||||+|||+|                        .|.|+..
T Consensus         1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d------------------------~~~gk~~   56 (244)
T cd04190           1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK------------------------KNRGKRD   56 (244)
T ss_pred             CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc------------------------ccCcchH
Confidence            699999997 7999999999999875         37999999999998                        1234433


Q ss_pred             -------HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccCchhhHHHHHh---HHH
Q 026146           83 -------AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHGWNLMRKLTSR---GAN  151 (242)
Q Consensus        83 -------a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~  151 (242)
                             +.|.++..+++||++++|+|+.+++++|+.++..+.+ +++++|.|.....+..   .++.......   ...
T Consensus        57 ~~~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~---~~~~~~~q~~ey~~~~  133 (244)
T cd04190          57 SQLWFFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKK---QGPLVMYQVFEYAISH  133 (244)
T ss_pred             HHHHHHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCc---chhHHHhHheehhhhh
Confidence                   5688888899999999999999999999999999964 4556666655443321   1222211111   001


Q ss_pred             HHHHH-Hh-CCCccccccchhhcchHHHHHhhhcccC-------------------CCcccchHHHHHHHHcCCceEE--
Q 026146          152 VLAQT-LL-WPGVSDLTGSFRLYKKSVLEDVISSCVS-------------------KGYVFQMEMIVRACRKGYHIEE--  208 (242)
Q Consensus       152 ~~~~~-~~-~~~~~~~~g~~~~~rr~~~~~~~~~~~~-------------------~~~~~d~~~~~~~~~~g~~i~~--  208 (242)
                      ..... .. ...+..+.|+++++|++++++++++...                   ..++||.+++.++..+|+++.+  
T Consensus       134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~  213 (244)
T cd04190         134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRKYLY  213 (244)
T ss_pred             hhcccHHHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCccEEEE
Confidence            11110 11 1224557788899999999998654321                   2368999999999999999999  


Q ss_pred             eeeeeeeccCCCcccc-hHHHHHHHHHH
Q 026146          209 VPITFVDRVFGSSKLG-GSEIVEYLKGL  235 (242)
Q Consensus       209 ~p~~~~~~~~~~s~~~-~~~~~~~~~~~  235 (242)
                      +|.+..+.....+-.. +++..||.++.
T Consensus       214 ~~~a~~~~~~p~s~~~~~~QR~RW~~g~  241 (244)
T cd04190         214 VPGAVAETDVPETFVELLSQRRRWINST  241 (244)
T ss_pred             ecccEEEEECCCCHHHHHHHhHhhhccc
Confidence            8988877665555333 36666776554

Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine

Probab=99.93  E-value=9.1e-25  Score=162.04  Aligned_cols=165  Identities=20%  Similarity=0.244  Sum_probs=118.6

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC---CCCcchHHHHHHHHh
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR---PKKLGLGTAYIHGLK   89 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~---~~~~g~~~a~n~g~~   89 (242)
                      ||||+||+++.|.++|++|.+|.  +.+|||||||+|+|+|.++++ +....  .+++++..   ..+.|++.|+|.|++
T Consensus         1 ViIp~~Ne~~~l~~~l~sl~~~~--~~~eIivvdd~S~D~t~~~~~-~~~~~--~~v~~i~~~~~~~~~Gk~~aln~g~~   75 (191)
T cd06436           1 VLVPCLNEEAVIQRTLASLLRNK--PNFLVLVIDDASDDDTAGIVR-LAITD--SRVHLLRRHLPNARTGKGDALNAAYD   75 (191)
T ss_pred             CEEeccccHHHHHHHHHHHHhCC--CCeEEEEEECCCCcCHHHHHh-heecC--CcEEEEeccCCcCCCCHHHHHHHHHH
Confidence            69999999999999999999986  578999999999999999998 32222  36777764   356799999999999


Q ss_pred             hcC-----------CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHH----HHH
Q 026146           90 HAS-----------GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGAN----VLA  154 (242)
Q Consensus        90 ~a~-----------~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  154 (242)
                      .++           ++|++|+|+|+.++|++++.+...+.+++++++.+.....+..   ..+........+.    ...
T Consensus        76 ~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~---~~~~~~~~~~e~~~~~~~~~  152 (191)
T cd06436          76 QIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYFSDPRVAGTQSRVRMYNRH---KNLLTILQDLEFFIIIAATQ  152 (191)
T ss_pred             HHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhhcCCceEEEeeeEEEecCC---CCHHHHHHHHHHHHHHHHHH
Confidence            875           3799999999999999999988877655666666655444322   1222211111111    111


Q ss_pred             HHHhCCCccccccchhhcchHHHHHhhhccc
Q 026146          155 QTLLWPGVSDLTGSFRLYKKSVLEDVISSCV  185 (242)
Q Consensus       155 ~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~  185 (242)
                      ......+...+.|.+.++||++++++|++..
T Consensus       153 ~~~~~~~~~~~~G~~~~~r~~~l~~vgg~~~  183 (191)
T cd06436         153 SLRALTGTVGLGGNGQFMRLSALDGLIGEEP  183 (191)
T ss_pred             HHHHhcCcEEECCeeEEEeHHHHHHhhcCCC
Confidence            1112222234567778999999999976543

N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=99.92  E-value=3.6e-25  Score=161.55  Aligned_cols=174  Identities=30%  Similarity=0.419  Sum_probs=126.7

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      ||||+||+++.|.++|+++.+|.. ..++|+||||+|+|.|.+.+.++....+ ..+.++...++.|++.++|.|++.++
T Consensus         1 Viip~~n~~~~l~~~l~sl~~q~~-~~~~iivvdd~s~d~t~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~n~~~~~~~   78 (180)
T cd06423           1 IIVPAYNEEAVIERTIESLLALDY-PKLEVIVVDDGSTDDTLEILEELAALYI-RRVLVVRDKENGGKAGALNAGLRHAK   78 (180)
T ss_pred             CeecccChHHHHHHHHHHHHhCCC-CceEEEEEeCCCccchHHHHHHHhcccc-ceEEEEEecccCCchHHHHHHHHhcC
Confidence            689999999999999999999865 6889999999999999999988765542 35777778889999999999999999


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHH-hcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHH-----HHHHhCCCccccc
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQL-ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVL-----AQTLLWPGVSDLT  166 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  166 (242)
                      ++|++|+|+|+.++++++++++..+. .++.+++.+.........   .+............     .............
T Consensus        79 ~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (180)
T cd06423          79 GDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSE---NLLTRLQAIEYLSIFRLGRRAQSALGGVLVLS  155 (180)
T ss_pred             CCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcC---cceeccchheecceeeeeeehhheecceeecC
Confidence            99999999999999999999965554 445666666555443320   00000000000000     0000112345577


Q ss_pred             cchhhcchHHHHHhhhcccCCCcccc
Q 026146          167 GSFRLYKKSVLEDVISSCVSKGYVFQ  192 (242)
Q Consensus       167 g~~~~~rr~~~~~~~~~~~~~~~~~d  192 (242)
                      |+++++||++++++|+|++. .++||
T Consensus       156 g~~~~~~~~~~~~~ggf~~~-~~~eD  180 (180)
T cd06423         156 GAFGAFRREALREVGGWDED-TLTED  180 (180)
T ss_pred             chHHHHHHHHHHHhCCcccc-CcCCC
Confidence            88999999999999987554 34444

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>KOG2977 consensus Glycosyltransferase [General function prediction only]

Probab=99.91  E-value=5.6e-23  Score=152.68  Aligned_cols=230  Identities=24%  Similarity=0.335  Sum_probs=176.5

Q ss_pred             CcEEEEEeCccccccHHH----HHHHHHhhhcC---CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchH
Q 026146            9 NKYSIIIPTYNERLNIAL----IVYLIFKHLRD---VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLG   81 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~----~l~sl~~~~~~---~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~   81 (242)
                      +-+|||||+||++..++.    +++.|.+....   ..+|++||||||.|.|.+++-++..++....++++...+|.|+|
T Consensus        67 ~~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~nrgKG  146 (323)
T KOG2977|consen   67 MYLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKNRGKG  146 (323)
T ss_pred             ceeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhccCCCC
Confidence            479999999999988864    45555444332   36899999999999999999999977766789999999999999


Q ss_pred             HHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHH-----hcCCcEEEEEEEeecC--CccCchhhHHHHHhHHHHHH
Q 026146           82 TAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL-----ETGASIVTGTRYVRSG--GVHGWNLMRKLTSRGANVLA  154 (242)
Q Consensus        82 ~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~-----~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  154 (242)
                      +|...|+.++.|++++|.|+|.----.-++.+.+++.     ....++++|++-....  .....++.+.+.=..++.+.
T Consensus       147 gAvR~g~l~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va~GsrahLe~~~a~a~rs~~r~iLM~gFH~lv  226 (323)
T KOG2977|consen  147 GAVRKGMLSSRGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVACGSRAHLENTEAVAKRSVIRNILMYGFHKLV  226 (323)
T ss_pred             cceehhhHhccCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCceeecCHHHhhccHHHHHHhHhhHHHHHHHHHHH
Confidence            9999999999999999999998744444555555543     2345677776655432  22333444444444455555


Q ss_pred             HHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccc-hHHHHHHHH
Q 026146          155 QTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLG-GSEIVEYLK  233 (242)
Q Consensus       155 ~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~-~~~~~~~~~  233 (242)
                      ..+-..++.+.++++.++.|.+..++..+.....|..|.++.+-+.+.+..+..+|+.+.+  .+.|+.. .+..++..+
T Consensus       227 ~~~a~rsI~DTQcgfklftR~aa~~if~~lh~e~W~fdvEll~La~~~~ipi~ei~v~w~E--IdgSKi~~~~s~~~m~~  304 (323)
T KOG2977|consen  227 WIFAIRSIRDTQCGFKLFTRAAARRIFPWLHVERWAFDVELLYLAKRFTIPIKEIPVEWTE--IDGSKITPVWSWLQMGS  304 (323)
T ss_pred             HHHhcCcccccchhHHHhHHHHHHhhcchhheeeeeccHHHHHHHHHcCCCcEEeeeEEEE--cCCceeehHHHHHHHhh
Confidence            5566778999999999999999999988888999999999999999999999999987654  4667765 566666666


Q ss_pred             HHHHHhh
Q 026146          234 GLLYLLI  240 (242)
Q Consensus       234 ~~~~~~~  240 (242)
                      .++-+++
T Consensus       305 dlv~i~v  311 (323)
T KOG2977|consen  305 DLVLIRV  311 (323)
T ss_pred             hhheEee
Confidence            6665543

>PRK05454 glucosyltransferase MdoH; Provisional

Probab=99.91  E-value=1.8e-22  Score=172.98  Aligned_cols=229  Identities=14%  Similarity=0.159  Sum_probs=159.5

Q ss_pred             CCCcEEEEEeCccccc-----cHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHH----HHHHHHHhC-CCcEEEeeCCC
Q 026146            7 NKNKYSIIIPTYNERL-----NIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEV----VKQLQQLYG-EDRILLRPRPK   76 (242)
Q Consensus         7 ~~~~isiiip~~n~~~-----~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~----l~~~~~~~~-~~~~~~~~~~~   76 (242)
                      ..++++|+||+||++.     .++.+++++..+.+..++|++|+||++++++...    +.++.++++ ..++.+.+...
T Consensus       122 ~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~  201 (691)
T PRK05454        122 PEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRR  201 (691)
T ss_pred             CCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCc
Confidence            4678999999999884     5888999998886556899999999999886543    345566553 34788888777


Q ss_pred             Ccc-hHHHHHHHHhh--cCCCEEEEEeCCCCCCCCChHHHHHHHH-hcCCcEEEEEEEeecCCccCchhhHHHHHhHHHH
Q 026146           77 KLG-LGTAYIHGLKH--ASGSFVVIMDADLSHHPKYLPSFIKKQL-ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANV  152 (242)
Q Consensus        77 ~~g-~~~a~n~g~~~--a~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (242)
                      |.| |++++|.+++.  +++||++++|+|..++++++.+++..++ ++++++|.+.....+.+    ++..+........
T Consensus       202 n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~----slfaR~qqf~~~~  277 (691)
T PRK05454        202 NVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGAD----TLFARLQQFATRV  277 (691)
T ss_pred             CCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCCC----CHHHHHHHHHHHH
Confidence            765 78888888988  5679999999999999999999999987 45666776544333322    3333333221111


Q ss_pred             HHHHH-hC-----CCccccccchhhcchHHHHHhhhcc--------cCCCcccchHHHHHHHHcCCceEEeeee-eeecc
Q 026146          153 LAQTL-LW-----PGVSDLTGSFRLYKKSVLEDVISSC--------VSKGYVFQMEMIVRACRKGYHIEEVPIT-FVDRV  217 (242)
Q Consensus       153 ~~~~~-~~-----~~~~~~~g~~~~~rr~~~~~~~~~~--------~~~~~~~d~~~~~~~~~~g~~i~~~p~~-~~~~~  217 (242)
                      ..... .+     .+-..+.|.+.++|++++.++++..        ......||.+...++.++||++.++|.. ..+-.
T Consensus       278 y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~~~~~ee  357 (691)
T PRK05454        278 YGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDLPGSYEE  357 (691)
T ss_pred             HHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcccccccc
Confidence            11100 01     1233356777899999999985432        2355788999999999999999999984 33323


Q ss_pred             CCCccc-chHHHHHHHHHHHHHh
Q 026146          218 FGSSKL-GGSEIVEYLKGLLYLL  239 (242)
Q Consensus       218 ~~~s~~-~~~~~~~~~~~~~~~~  239 (242)
                      ...+-. -.++..||.++.++.+
T Consensus       358 ~P~tl~~~~~qr~RW~~G~lQ~l  380 (691)
T PRK05454        358 LPPNLLDELKRDRRWCQGNLQHL  380 (691)
T ss_pred             CCCCHHHHHHHHHHHHhchHHHH
Confidence            233322 2366777777766644

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=99.90  E-value=2.4e-22  Score=173.06  Aligned_cols=203  Identities=14%  Similarity=0.085  Sum_probs=144.3

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      ...|++||+||+|||+..+.++++++.....++++||+++++++++.|.+.++++.+.+|...+.+...+.|.||+.|+|
T Consensus        60 ~~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~~g~~gKa~aLN  139 (727)
T PRK11234         60 PDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPATQADVDAVCARFPNVHKVVCARPGPTSKADCLN  139 (727)
T ss_pred             CCCCCEEEEEecCcchhhHHHHHHHHHHhCCCCCeEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCCCCCCCHHHHHH
Confidence            35689999999999999999999998644344689999999988888999999999988754333444455789999999


Q ss_pred             HHHhhc-------C--CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHH--H--
Q 026146           86 HGLKHA-------S--GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGAN--V--  152 (242)
Q Consensus        86 ~g~~~a-------~--~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~--  152 (242)
                      .|++.+       .  .+.+++.|+|+.++|++|. ++..+.+ +.+++.+.....+..  ...+........+.  .  
T Consensus       140 ~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l~~-~~~~VQ~p~~p~~~~--~~~~~~~~~~~EFa~~~~~  215 (727)
T PRK11234        140 NVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYLVE-RKDLIQIPVYPFERE--WTHFTSGTYIDEFAELHGK  215 (727)
T ss_pred             HHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhhcC-CCCeEeecccCCCcc--HHHHHHHHHHHHHHHHhhh
Confidence            999987       2  3668889999999999998 5666654 347777754421111  11111111111111  0  


Q ss_pred             --HHHHHhCCCccccccchhhc-ch--HHHHHhh-h-cccCCCcccchHHHHHHHHcCCceEEeeeee
Q 026146          153 --LAQTLLWPGVSDLTGSFRLY-KK--SVLEDVI-S-SCVSKGYVFQMEMIVRACRKGYHIEEVPITF  213 (242)
Q Consensus       153 --~~~~~~~~~~~~~~g~~~~~-rr--~~~~~~~-~-~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~  213 (242)
                        ......+ +.....|.+++| ||  +++.++| + ........||+++++++.+.|+++.++|..+
T Consensus       216 ~~~~~~~lg-g~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v  282 (727)
T PRK11234        216 DVPVREALA-GQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPV  282 (727)
T ss_pred             hhHHHHHcC-CCcccCCceEEEecccHHHHHHhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEccccc
Confidence              1111122 233567777889 66  4677775 4 3567788999999999999999999999544

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=99.86  E-value=6.5e-20  Score=156.39  Aligned_cols=200  Identities=14%  Similarity=0.089  Sum_probs=138.2

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      +.+.+||+||+|||++.+.++++++.+...+++++|+|+....+.+|.+.++++...+|..++..+.++++.||+.|+|.
T Consensus        69 ~~~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~~~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~gp~gKa~ALN~  148 (703)
T PRK15489         69 DEQPLAIMVPAWKEYDVIAKMIENMLATLDYRRYVIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHDGPTCKADCLNW  148 (703)
T ss_pred             CCCceEEEEeCCCcHHHHHHHHHHHHhcCCCCCeEEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCCCCCCHHHHHHH
Confidence            45899999999999999999999986544557899999654455589999999988776333333344556889999999


Q ss_pred             HHhhc-------CC--CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHH------
Q 026146           87 GLKHA-------SG--SFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGAN------  151 (242)
Q Consensus        87 g~~~a-------~~--d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------  151 (242)
                      |++.+       .+  +.+++.|+|+.++|+.|..+ ..+.. +.+++.++......  ...++........+.      
T Consensus       149 ~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~-~~~~iQ~pV~~~~~--~~~~~l~~~~~~Efa~~~~~~  224 (703)
T PRK15489        149 IIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYF-NYLLP-RKDLVQLPVLSLER--KWYEWVAGTYMDEFAEWHQKD  224 (703)
T ss_pred             HHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHH-HhhcC-CcceeeeeeccCCC--ccccHHHHHHHHHHHHHhhhH
Confidence            99886       23  34899999999999999765 54443 44777765433221  112333222211111      


Q ss_pred             HHHHHHhCCCccccccchhhcchHHHHHh---hhc--ccCCCcccchHHHHHHHHcCCceEEeee
Q 026146          152 VLAQTLLWPGVSDLTGSFRLYKKSVLEDV---ISS--CVSKGYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       152 ~~~~~~~~~~~~~~~g~~~~~rr~~~~~~---~~~--~~~~~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      ...+...+..+ ...|..++|||++++++   |+.  .......||+|+.+|+.+.|+++.++-.
T Consensus       225 l~~r~~l~~~i-pl~Gv~~~frr~aL~~l~~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~  288 (703)
T PRK15489        225 LVVRESLTGTV-PSAGVGTCFSRRALLALMKERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRF  288 (703)
T ss_pred             HHHHHHcCCce-eccCcceeeeHHHHHHHHHhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEE
Confidence            11121222233 46777789999999987   443  3456779999999999999999988433

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide

Probab=99.84  E-value=3.2e-20  Score=141.52  Aligned_cols=106  Identities=27%  Similarity=0.246  Sum_probs=92.2

Q ss_pred             cEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHh
Q 026146           10 KYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLK   89 (242)
Q Consensus        10 ~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~   89 (242)
                      +|||+||+||+++.|++||+|+..|.    .|||||||||+|+|.++++++       .++++.. .+.|.+.++|.|++
T Consensus         1 ~isvii~~~Ne~~~l~~~l~sl~~~~----~eiivvD~gStD~t~~i~~~~-------~~~v~~~-~~~g~~~~~n~~~~   68 (229)
T cd02511           1 TLSVVIITKNEERNIERCLESVKWAV----DEIIVVDSGSTDRTVEIAKEY-------GAKVYQR-WWDGFGAQRNFALE   68 (229)
T ss_pred             CEEEEEEeCCcHHHHHHHHHHHhccc----CEEEEEeCCCCccHHHHHHHc-------CCEEEEC-CCCChHHHHHHHHH
Confidence            48999999999999999999998763    299999999999999988854       3566666 78899999999999


Q ss_pred             hcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146           90 HASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        90 ~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      .|++|||+++|+|..+++++++.+.+.+.+++......
T Consensus        69 ~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~~~~~~  106 (229)
T cd02511          69 LATNDWVLSLDADERLTPELADEILALLATDDYDGYYV  106 (229)
T ss_pred             hCCCCEEEEEeCCcCcCHHHHHHHHHHHhCCCCcEEEE
Confidence            99999999999999999999999999987655444433

UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

Probab=99.83  E-value=2.5e-19  Score=127.52  Aligned_cols=152  Identities=28%  Similarity=0.432  Sum_probs=125.9

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      |+||++|+.+.+..+++++.++.. ...+++|+||++++.+.+.+.++.+..  ..+..+....+.|.+.++|.+++.+.
T Consensus         1 iii~~~~~~~~l~~~l~s~~~~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~   77 (156)
T cd00761           1 VIIPAYNEEPYLERCLESLLAQTY-PNFEVIVVDDGSTDGTLEILEEYAKKD--PRVIRVINEENQGLAAARNAGLKAAR   77 (156)
T ss_pred             CEEeecCcHHHHHHHHHHHHhCCc-cceEEEEEeCCCCccHHHHHHHHHhcC--CCeEEEEecCCCChHHHHHHHHHHhc
Confidence            689999999999999999998854 578999999999999999888876541  24666777888999999999999999


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHH-hcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhh
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQL-ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRL  171 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  171 (242)
                      +|+++++|+|..++++++..++.... .++.+++.+.                                       ++++
T Consensus        78 ~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~---------------------------------------~~~~  118 (156)
T cd00761          78 GEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP---------------------------------------GNLL  118 (156)
T ss_pred             CCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc---------------------------------------chhe
Confidence            99999999999999999999855444 3456666654                                       5668


Q ss_pred             cchHHHHHhhhcccC-CCcccchHHHHHHHHcCCce
Q 026146          172 YKKSVLEDVISSCVS-KGYVFQMEMIVRACRKGYHI  206 (242)
Q Consensus       172 ~rr~~~~~~~~~~~~-~~~~~d~~~~~~~~~~g~~i  206 (242)
                      ++++.+++++++... ..+++|.+++.++...|..+
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~ed~~~~~~~~~~g~~~  154 (156)
T cd00761         119 FRRELLEEIGGFDEALLSGEEDDDFLLRLLRGGKVA  154 (156)
T ss_pred             eeHHHHHHhCCcchHhcCCcchHHHHHHHHhhcccc
Confidence            999999999877553 34478999999998888654

Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.79  E-value=2.1e-18  Score=130.67  Aligned_cols=106  Identities=37%  Similarity=0.532  Sum_probs=94.0

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHH
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHG   87 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g   87 (242)
                      +|++|||||+||+++.+..+|+|+.+|+.. ++|||||||||+|+|.++++++.+..  ..+.......|.|.+.++|.|
T Consensus         2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~-~~eiivvddgs~d~t~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~   78 (291)
T COG0463           2 MPKVSVVIPTYNEEEYLPEALESLLNQTYK-DFEIIVVDDGSTDGTTEIAIEYGAKD--VRVIRLINERNGGLGAARNAG   78 (291)
T ss_pred             CccEEEEEeccchhhhHHHHHHHHHhhhhc-ceEEEEEeCCCCCChHHHHHHHhhhc--ceEEEeecccCCChHHHHHhh
Confidence            589999999999999999999999999763 58999999999999999999987654  246666778899999999999


Q ss_pred             HhhcCCCEEEEEeCCCCCCCCChHHHHHHH
Q 026146           88 LKHASGSFVVIMDADLSHHPKYLPSFIKKQ  117 (242)
Q Consensus        88 ~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~  117 (242)
                      +..+.+++++++|+|+. .+..+..+....
T Consensus        79 ~~~~~~~~~~~~d~d~~-~~~~~~~~~~~~  107 (291)
T COG0463          79 LEYARGDYIVFLDADDQ-HPPELIPLVAAG  107 (291)
T ss_pred             HHhccCCEEEEEccCCC-CCHHHHHHHHHh
Confidence            99999999999999999 988888855444

>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=7.4e-18  Score=131.03  Aligned_cols=206  Identities=18%  Similarity=0.200  Sum_probs=147.0

Q ss_pred             CCCCcEEEEEeCcccc-ccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHH
Q 026146            6 KNKNKYSIIIPTYNER-LNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTA   83 (242)
Q Consensus         6 ~~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a   83 (242)
                      ..+|.-||||..+|++ ..|.+++.|++.+... ---|||+|||+|.|.+  ..+.+.+   .++++++++.++-|.-.+
T Consensus       121 ~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dpe--d~~~L~r---i~kvr~LRN~~ReGLirS  195 (559)
T KOG3738|consen  121 VDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPE--DGKLLKR---IPKVRVLRNNEREGLIRS  195 (559)
T ss_pred             cCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChH--HHHHHhh---hheeeeecccchhhhhhh
Confidence            3568899999999976 5678899999988654 3459999999999743  2333322   247999999999999999


Q ss_pred             HHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecC-------------CccCchhhHHHHH-hH
Q 026146           84 YIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSG-------------GVHGWNLMRKLTS-RG  149 (242)
Q Consensus        84 ~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~-------------~~~~~~~~~~~~~-~~  149 (242)
                      ++.|.+.|++.++.|||+.+++..+||+.+++.+.++...+|......-+.             +.+.|++.-+... ..
T Consensus       196 RvrGAdvA~a~vltFLDSHcEvN~~WLePLL~Rvaed~trvVsPiiDvIn~dnf~Y~~asadLrGGFDWsLhF~We~~~~  275 (559)
T KOG3738|consen  196 RVRGADVAQATVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVSPIIDVINLDNFSYVGASADLRGGFDWSLHFKWEQMQL  275 (559)
T ss_pred             hccccccccceEEEEEecceeecchhhHHHHHHHhhcccceeecccccccccccccccchhhhcCCcceEEEEEehhcCH
Confidence            999999999999999999999999999999999987555555442221111             1222222111110 01


Q ss_pred             HHHHHH--HHhCCCccccccchhhcchHHHHHhhhcccCCC-c-ccchHHHHHHHHcCCceEEeeeeeeec
Q 026146          150 ANVLAQ--TLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKG-Y-VFQMEMIVRACRKGYHIEEVPITFVDR  216 (242)
Q Consensus       150 ~~~~~~--~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~-~-~~d~~~~~~~~~~g~~i~~~p~~~~~~  216 (242)
                      .+...+  .......+.+.||.+++.|+-|.++|.|+.... | +|.+|+++|++.-|..+..+|.+.+-|
T Consensus       276 eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGH  346 (559)
T KOG3738|consen  276 EQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGH  346 (559)
T ss_pred             HHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhh
Confidence            111111  011223456789999999999999998865433 3 678999999999999999999665443

>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=4.4e-18  Score=140.91  Aligned_cols=212  Identities=18%  Similarity=0.176  Sum_probs=156.7

Q ss_pred             CCCCcEEEEEeCcccc-ccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCC-hHHHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146            6 KNKNKYSIIIPTYNER-LNIALIVYLIFKHLRD-VDFEIIVVDDGSPDG-TQEVVKQLQQLYGEDRILLRPRPKKLGLGT   82 (242)
Q Consensus         6 ~~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~-t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~   82 (242)
                      ...|..||||+.+|+. ..+.+++.|+...+.. .--|||+|||.|+.+ ....++++.+.+.  .+++++.+.+.|.-.
T Consensus       139 ~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~--~v~i~r~~~R~GLIr  216 (578)
T KOG3736|consen  139 DKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRFS--KVRILRTKKREGLIR  216 (578)
T ss_pred             cccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhhc--ceeEEeecchhhhHH
Confidence            3579999999999976 5557889998887654 346999999999765 3666888888876  399999999999999


Q ss_pred             HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCC-------------ccCchhhHHHHHhH
Q 026146           83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGG-------------VHGWNLMRKLTSRG  149 (242)
Q Consensus        83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~-------------~~~~~~~~~~~~~~  149 (242)
                      |+..|...|+||.+.|+|+-+++..+|++.+++.+.++...++......-+..             ...|.+........
T Consensus       217 ARl~GA~~A~geVL~FLDsHcE~n~gWLePLL~~I~~~r~tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l~f~w~~lP  296 (578)
T KOG3736|consen  217 ARLLGASMATGEVLTFLDSHCEVNVGWLEPLLARIAEDRKTVVCPVIDVIDDNTFEYEKQSELMRGGFDWELTFKWERLP  296 (578)
T ss_pred             HHhhhhhhhhchheeeeecceeEecCcchHHHHHhhhcCceeecceEEeecCcCceecccCccceeeeecceeEEeccCC
Confidence            99999999999999999999999999999999999886666666533222211             11111111100111


Q ss_pred             HHHHHHHH---hCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeeeeeccCC
Q 026146          150 ANVLAQTL---LWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITFVDRVFG  219 (242)
Q Consensus       150 ~~~~~~~~---~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~  219 (242)
                      .....+..   .....+...||.+++.|+.|.++|.+++....  +|.+||++|+++-|.++..+|.+.+.|.+.
T Consensus       297 ~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGHifR  371 (578)
T KOG3736|consen  297 LPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGHIFR  371 (578)
T ss_pred             ccHhhcccCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceeeeee
Confidence            11111110   11124567889999999999999999774433  678999999999999999999777665544

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=99.69  E-value=3.3e-16  Score=113.80  Aligned_cols=134  Identities=20%  Similarity=0.255  Sum_probs=103.8

Q ss_pred             chHHHHHHHHhh-cCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHH
Q 026146           79 GLGTAYIHGLKH-ASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTL  157 (242)
Q Consensus        79 g~~~a~n~g~~~-a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (242)
                      +|..++..+++. +++|+++++|+|..++|++|.+++..+++++.++|.+.....+..    .+................
T Consensus        17 ~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~----~~~~~l~~~~~~~~~~~~   92 (175)
T PF13506_consen   17 PKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPAR----GFWSRLEAAFFNFLPGVL   92 (175)
T ss_pred             hHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCc----CHHHHHHHHHHhHHHHHH
Confidence            488888899998 999999999999999999999999999888899998866654433    333333322222222211


Q ss_pred             h-CCCccccccchhhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEeeeeeeec
Q 026146          158 L-WPGVSDLTGSFRLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVPITFVDR  216 (242)
Q Consensus       158 ~-~~~~~~~~g~~~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~  216 (242)
                      . ..+.....|++|++||++++++|++.. ...++||+.+..++.+.|+++...|....+.
T Consensus        93 ~a~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~~v~~~  153 (175)
T PF13506_consen   93 QALGGAPFAWGGSMAFRREALEEIGGFEALADYLADDYALGRRLRARGYRVVLSPYPVVQT  153 (175)
T ss_pred             HHhcCCCceecceeeeEHHHHHHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcchheeec
Confidence            1 235666889999999999999998865 5677999999999999999999999765543

>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.68  E-value=1.5e-16  Score=123.64  Aligned_cols=211  Identities=17%  Similarity=0.176  Sum_probs=150.8

Q ss_pred             CCCCcEEEEEeCcccc-ccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCC-hHHHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146            6 KNKNKYSIIIPTYNER-LNIALIVYLIFKHLRD-VDFEIIVVDDGSPDG-TQEVVKQLQQLYGEDRILLRPRPKKLGLGT   82 (242)
Q Consensus         6 ~~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~-t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~   82 (242)
                      .+.|+.||||+.+|+. ..|.+++.|+...... --.|||.|||-|+.+ ..+.+.++...++ ..+++++++++-|.-.
T Consensus       152 e~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLkekLDeYv~~fn-GlVkV~Rne~REGLI~  230 (603)
T KOG3737|consen  152 ENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLKEKLDEYVKLFN-GLVKVFRNERREGLIQ  230 (603)
T ss_pred             ccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHHHHHHHHHHHhc-CEEEEEecchhhhhhh
Confidence            3568999999999965 6778999999877544 345899999998654 7788888888886 4789999999999999


Q ss_pred             HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEee-c---------CC--------ccCchhhHH
Q 026146           83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVR-S---------GG--------VHGWNLMRK  144 (242)
Q Consensus        83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~-~---------~~--------~~~~~~~~~  144 (242)
                      |+..|.++|.|+.++|||+.+.+..+|+..|+..+..+...+-+. .... +         .+        ...|.+.-+
T Consensus       231 aRSiGA~~atGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTVP-~IDgId~n~~EyrpvyG~dn~h~rGifeWgmLyK  309 (603)
T KOG3737|consen  231 ARSIGAQKATGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTVP-LIDGIDGNTYEYRPVYGGDNDHARGIFEWGMLYK  309 (603)
T ss_pred             hhccchhhccccEEEEEecceeeecccccccccccccCceEEEEe-eeeeecCCceEEeeccCCcchhhcchhhhhheec
Confidence            999999999999999999999999999999999987644333222 1110 0         00        111111000


Q ss_pred             HHH-hHHHHHHHHHh--CCCccccccchhhcchHHHHHhhhcccCCC-c-ccchHHHHHHHHcCCceEEeeeeeeeccC
Q 026146          145 LTS-RGANVLAQTLL--WPGVSDLTGSFRLYKKSVLEDVISSCVSKG-Y-VFQMEMIVRACRKGYHIEEVPITFVDRVF  218 (242)
Q Consensus       145 ~~~-~~~~~~~~~~~--~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~-~-~~d~~~~~~~~~~g~~i~~~p~~~~~~~~  218 (242)
                      -.. .......+...  ...-+...|+.++|.|+.|.++|.+++..- | +|.+|++++.++-|.++..+|.+.+-|.+
T Consensus       310 e~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCSrVGHvY  388 (603)
T KOG3737|consen  310 EVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCSRVGHVY  388 (603)
T ss_pred             cCCCCHHHHHhhhccCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEccccchhh
Confidence            000 00000011111  112345678888999999999998876443 3 67899999999999999999977655443

>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.60  E-value=5.8e-15  Score=114.15  Aligned_cols=202  Identities=19%  Similarity=0.182  Sum_probs=151.0

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcch---HHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGL---GTA   83 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~---~~a   83 (242)
                      ..|.||||.|...-++++...+++-....+ +.+|++.|-+.++|+..+.++++.++||....++.-..+..|.   -.+
T Consensus        83 ~LPgVSiikPl~G~d~nl~~Nlesffts~Y-~~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~vg~npKInN  161 (431)
T KOG2547|consen   83 KLPGVSIIKPLKGVDPNLYHNLESFFTSQY-HKYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKVGLNPKINN  161 (431)
T ss_pred             CCCCceEEeecccCCchhHHhHHHHHhhcc-CceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEcccccccChhhhc
Confidence            579999999999999999999999877655 5999999999999999999999999999888888887777774   334


Q ss_pred             HHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhc-CCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHh-C--
Q 026146           84 YIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET-GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLL-W--  159 (242)
Q Consensus        84 ~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--  159 (242)
                      .--|.+.|+.|+|+|.|+|..+.||-+-.+...++.+ .-+.|.+.++....+.....+...+..   ....+... +  
T Consensus       162 ~mpgy~~a~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~dr~Gf~atle~~~fg---Tsh~r~yl~~n~  238 (431)
T KOG2547|consen  162 MMPGYRAAKYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKDRQGFDATLEQVYFG---TSHPRIYLSGNV  238 (431)
T ss_pred             cCHHHHHhcCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCceeeccccchhhhhheeec---cCCceEEEcccc
Confidence            4468899999999999999999999999999888753 456677777765544322222221100   00000001 1  


Q ss_pred             CCccccccchhhcchHHHHHhhhcccCCCc-ccchHHHHHHHHcCCceEEeeee
Q 026146          160 PGVSDLTGSFRLYKKSVLEDVISSCVSKGY-VFQMEMIVRACRKGYHIEEVPIT  212 (242)
Q Consensus       160 ~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~-~~d~~~~~~~~~~g~~i~~~p~~  212 (242)
                      .++...+|...++||+++++.||......+ .||+-+.......|++.......
T Consensus       239 ~~~~c~tgms~~mrK~~ld~~ggi~~f~~yLaedyFaaksllSRG~ksaist~p  292 (431)
T KOG2547|consen  239 LGFNCSTGMSSMMRKEALDECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTHP  292 (431)
T ss_pred             ccccccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhhhhhcccc
Confidence            123345666678999999999887665444 78988888899999997766533

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=99.54  E-value=7.8e-14  Score=103.59  Aligned_cols=136  Identities=21%  Similarity=0.248  Sum_probs=95.4

Q ss_pred             EEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhH---HHHHHH-H-HhCCCccccccch
Q 026146           95 FVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRG---ANVLAQ-T-LLWPGVSDLTGSF  169 (242)
Q Consensus        95 ~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~-~~~~~~~~~~g~~  169 (242)
                      ||+++|+|+.++++++++++..+++++.+++.+.....+.+    ++........   ...... . ..........|++
T Consensus         1 ~v~~~DaDt~~~~d~l~~~~~~~~~~~~~~vq~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~   76 (193)
T PF13632_consen    1 YVLFLDADTRLPPDFLERLVAALEDPKVDAVQGPIIFRNRG----SLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSG   76 (193)
T ss_pred             CEEEEcCCCCCChHHHHHHHHHHhCCCceEEEccEEecCCC----ChhheeehhhhhhhhhhhHHHHHhcCCCccccCcc
Confidence            68999999999999999999999866888888877764322    1111111111   111111 1 1122344467888


Q ss_pred             hhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccc-hHHHHHHHHH
Q 026146          170 RLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLG-GSEIVEYLKG  234 (242)
Q Consensus       170 ~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~-~~~~~~~~~~  234 (242)
                      +++|+++++++|+++.....+||.+++.++.++|+++.++|....++..+.+-.. .++..||.++
T Consensus        77 ~~~r~~~l~~vg~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g  142 (193)
T PF13632_consen   77 MLFRREALREVGGFDDPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAPPTFRAFIRQRRRWARG  142 (193)
T ss_pred             eeeeHHHHHHhCcccccccccchHHHHHHHHHCCCEEEEecccceeeeCCCCHHHHHHHHHHHHhh
Confidence            9999999999988775667789999999999999999999988666655444322 3566667666

>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B

Probab=99.52  E-value=8e-14  Score=104.65  Aligned_cols=175  Identities=18%  Similarity=0.243  Sum_probs=97.7

Q ss_pred             EEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhh
Q 026146           11 YSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKH   90 (242)
Q Consensus        11 isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~   90 (242)
                      ||||+++ |.+..+.+|++++.++.. ++.+.|-+++-                          ....+.+.++|.|+++
T Consensus         1 isiI~c~-n~~~~~~~~~~~i~~~~~-~~~~~i~i~~~--------------------------~~~~s~~~~yN~a~~~   52 (217)
T PF13712_consen    1 ISIIICV-NDEELYEECLRSIKRLIG-PPGELIEIDNV--------------------------RNAKSMAAAYNEAMEK   52 (217)
T ss_dssp             EEEEEEE-S-HHHHHHHHHHHHHTT---TEEEEEEE-S--------------------------SS-S-TTTHHHHHGGG
T ss_pred             CEEEEEE-CCHHHHHHHHHHHHhhCC-CCceEEEEecc--------------------------CCCcCHHHHHHHHHHh
Confidence            4666655 556778889999987743 56777777663                          1125789999999999


Q ss_pred             cCCCEEEEEeCCCCC-CCCChHHHHHHHHh-cCCcEEE--EEEEeecCCc--cCc-------hhhHHHHHhHHHHHHHH-
Q 026146           91 ASGSFVVIMDADLSH-HPKYLPSFIKKQLE-TGASIVT--GTRYVRSGGV--HGW-------NLMRKLTSRGANVLAQT-  156 (242)
Q Consensus        91 a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~-~~~~~v~--~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~-  156 (242)
                      |+++|++|+++|..+ +++|+..+++.+++ ++.+++.  |+......+.  ...       ...+............. 
T Consensus        53 a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~~~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~~~  132 (217)
T PF13712_consen   53 AKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKRLPPNGVWWESPNKVGKVREYGRIMHGHGPNSAGEVR  132 (217)
T ss_dssp             --SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEESS-S-TTS---EEEEEETTEEEE----E---------
T ss_pred             CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCcCCCCCccccccccccccccccccccccccccccccc
Confidence            999999999999995 68999999999954 3444432  3333322110  000       00000000000000000 


Q ss_pred             ------HhCCCccccccchhhcchHHHHHhhhcccC--CCc-ccchHHHHHHHHcCCceEEeeeeeeecc
Q 026146          157 ------LLWPGVSDLTGSFRLYKKSVLEDVISSCVS--KGY-VFQMEMIVRACRKGYHIEEVPITFVDRV  217 (242)
Q Consensus       157 ------~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~--~~~-~~d~~~~~~~~~~g~~i~~~p~~~~~~~  217 (242)
                            .....+..+-|.+++++++++    +|++.  .+| ..|+++|+++.++|+++...|....|..
T Consensus       133 ~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v~~~~~~~~H~s  198 (217)
T PF13712_consen  133 YGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRVVVPPPWCIHFS  198 (217)
T ss_dssp             ----ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EEEE-----EE-S
T ss_pred             ccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEEEecCceEEEcC
Confidence                  123456778899999999999    45554  555 6799999999999999966665544443

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides

Probab=99.49  E-value=5.8e-13  Score=105.07  Aligned_cols=106  Identities=20%  Similarity=0.302  Sum_probs=81.7

Q ss_pred             EEEEEeCccccccHHHHHHHHHhhh-cCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC----CC--------
Q 026146           11 YSIIIPTYNERLNIALIVYLIFKHL-RDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP----KK--------   77 (242)
Q Consensus        11 isiiip~~n~~~~l~~~l~sl~~~~-~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~----~~--------   77 (242)
                      +.|+|++||+.+.+.++|++|++|. ....++|||.+||+.+++.+.++.+.     ..++++...    .+        
T Consensus         2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~-----~~i~~i~~~~~~~~~~~~~~~~~   76 (334)
T cd02514           2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFG-----DGVTHIQHPPISIKNVNPPHKFQ   76 (334)
T ss_pred             cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhc-----cccEEEEcccccccccCcccccc
Confidence            5799999999999999999999984 22578999999999888888777762     134455432    12        


Q ss_pred             --cchHH----HHHHHHhhcCCCEEEEEeCCCCCCCCCh---HHHHHHHHhcC
Q 026146           78 --LGLGT----AYIHGLKHASGSFVVIMDADLSHHPKYL---PSFIKKQLETG  121 (242)
Q Consensus        78 --~g~~~----a~n~g~~~a~~d~i~~lD~D~~~~~~~l---~~l~~~~~~~~  121 (242)
                        .+.+.    |+|.++....++++++|++|+.+.|+++   +.++..+++.+
T Consensus        77 ~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~  129 (334)
T cd02514          77 GYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDP  129 (334)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCC
Confidence              12233    8999998889999999999999999955   66666666543

Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.

>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Probab=99.08  E-value=4.3e-09  Score=78.01  Aligned_cols=150  Identities=14%  Similarity=0.097  Sum_probs=101.0

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      .+++||||-+++.+.|...+.-+..-+..  -++.|+|++.-..                         ..+.++..+|.
T Consensus         2 ~~~aiivpyr~R~~~l~~~l~~~~~~L~rq~~~~~i~vi~Q~~~-------------------------~~FNR~~llNv   56 (219)
T cd00899           2 HKVAIIVPFRNRFEHLLIFLPHLHPFLQRQQLDYRIFVIEQVGN-------------------------FRFNRAKLLNV   56 (219)
T ss_pred             cceEEEEecCCHHHHHHHHHHHHHHHHHhcCCcEEEEEEEecCC-------------------------ccchhhhhhhH
Confidence            47999999999999988877766544332  5678888875321                         12456677888


Q ss_pred             HHhhc----CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCc
Q 026146           87 GLKHA----SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGV  162 (242)
Q Consensus        87 g~~~a----~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (242)
                      |+..|    ..++++|-|.|..+..+...-   .+.+.+.-+..+  ...                       .....+.
T Consensus        57 G~~~a~k~~~~dc~i~hDVDllP~~~~~~y---~~~~~p~H~s~~--~~~-----------------------~~~~lpy  108 (219)
T cd00899          57 GFLEALKDGDWDCFIFHDVDLLPENDRNLY---GCEEGPRHLSVP--LDK-----------------------FHYKLPY  108 (219)
T ss_pred             HHHHHhhcCCccEEEEecccccccCccccc---cCCCCCeEEEEe--ecc-----------------------cccccCc
Confidence            77666    358899999998877776331   222211111111  100                       0001112


Q ss_pred             cccccchhhcchHHHHHhhhccc-CCCc-ccchHHHHHHHHcCCceEEeee
Q 026146          163 SDLTGSFRLYKKSVLEDVISSCV-SKGY-VFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       163 ~~~~g~~~~~rr~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      ....||+++++++-+.+++|+++ ..+| +||.||..|+..+|+++...+.
T Consensus       109 ~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~  159 (219)
T cd00899         109 KTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSG  159 (219)
T ss_pred             ccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccC
Confidence            24578899999999999988866 5577 4899999999999999998873

Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.

>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2

Probab=99.03  E-value=1e-08  Score=85.57  Aligned_cols=222  Identities=17%  Similarity=0.195  Sum_probs=136.1

Q ss_pred             cEEEEEeCccc-cccHHHHHHHHHhhhcC-CCeEEEEEeCC------CCCChHHHHHHHHHHh------C----------
Q 026146           10 KYSIIIPTYNE-RLNIALIVYLIFKHLRD-VDFEIIVVDDG------SPDGTQEVVKQLQQLY------G----------   65 (242)
Q Consensus        10 ~isiiip~~n~-~~~l~~~l~sl~~~~~~-~~~eiivvd~~------s~d~t~~~l~~~~~~~------~----------   65 (242)
                      .+-..+|+||| ++.|+.+|+||..+.++ .+--|+||.||      .+..|.+++.+....+      |          
T Consensus        26 ~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~~~~~~~~~~~~~~~~~~~~  105 (527)
T PF03142_consen   26 FVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILGDFVDPPEDPEPLSYVSLGE  105 (527)
T ss_pred             eEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhcccCCCcCCCCCcceEEecc
Confidence            45668999995 57889999999888665 22235555555      2345888877665511      0          


Q ss_pred             ------------------C------------CcEEEee----------CCCCcchHHHHHHHHhh---------------
Q 026146           66 ------------------E------------DRILLRP----------RPKKLGLGTAYIHGLKH---------------   90 (242)
Q Consensus        66 ------------------~------------~~~~~~~----------~~~~~g~~~a~n~g~~~---------------   90 (242)
                                        +            +-+.+++          .++|.||-.+.-..+..               
T Consensus       106 g~~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~~NrGKRDsq~~~~~fl~~~~~~~~~~~~~~  185 (527)
T PF03142_consen  106 GSKQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKPGNRGKRDSQILLMSFLNKVHFNNPMTPLEL  185 (527)
T ss_pred             CchhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhcccccccCCchHHHHHHHHHHHHHhcCCCCchHHH
Confidence                              1            1234444          57788875544333321               


Q ss_pred             --------------cCCCEEEEEeCCCCCCCCChHHHHHHHHhc-CCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHH
Q 026146           91 --------------ASGSFVVIMDADLSHHPKYLPSFIKKQLET-GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQ  155 (242)
Q Consensus        91 --------------a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (242)
                                    ...||++.+|+|+.+.|+.+..++..+.++ +..++.|.....+.+..-+.+...+.....+.+.+
T Consensus       186 e~~~~i~~~~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~l~K  265 (527)
T PF03142_consen  186 ELFHQIWNIIGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETRIDNKGQSWWTMYQVFEYAISHHLQK  265 (527)
T ss_pred             HHHHHHHHHhccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeEEcCCCCCHhhheeccchhHHHHHHH
Confidence                          124999999999999999999999998754 45555664333333322233333333333344333


Q ss_pred             ---HHhCCCccccccchhhcchHHHHH-------------h-hhc---------cc-CCCcccchHHHHHHHHc--CCce
Q 026146          156 ---TLLWPGVSDLTGSFRLYKKSVLED-------------V-ISS---------CV-SKGYVFQMEMIVRACRK--GYHI  206 (242)
Q Consensus       156 ---~~~~~~~~~~~g~~~~~rr~~~~~-------------~-~~~---------~~-~~~~~~d~~~~~~~~~~--g~~i  206 (242)
                         ...+ .+..+.||+.++|-++++.             + ..+         .. ...++||-.++.-+.+.  |+++
T Consensus       266 a~Es~fG-~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl~~lGEDR~LttLlLk~~~~~k~  344 (527)
T PF03142_consen  266 AFESVFG-SVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNLLDLGEDRWLTTLLLKQFPGYKT  344 (527)
T ss_pred             HHHHHhC-ceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhhhhcchhHHHHHHHHhhCCCceE
Confidence               3333 5777889998988777654             1 111         11 13579999999877777  7899


Q ss_pred             EEeeeeeeeccCCCcccch-HHHHHHH
Q 026146          207 EEVPITFVDRVFGSSKLGG-SEIVEYL  232 (242)
Q Consensus       207 ~~~p~~~~~~~~~~s~~~~-~~~~~~~  232 (242)
                      .++|.+..+-..+++-..+ ++..||.
T Consensus       345 ~y~~~A~a~T~aP~t~~vflsQRRRWi  371 (527)
T PF03142_consen  345 EYVPSAVAYTDAPETFSVFLSQRRRWI  371 (527)
T ss_pred             EEcccccccccCCccHHHHHHHhhhcc
Confidence            9999776654444432222 4444444

4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups

>PLN02893 Cellulose synthase-like protein

Probab=98.95  E-value=1.6e-08  Score=86.99  Aligned_cols=171  Identities=12%  Similarity=0.043  Sum_probs=106.8

Q ss_pred             CcEEEeeCCCCcc-----hHHHHHHHHhh----cCCCEEEEEeCCCCC-CCCChHHHHHHHHhc----CCcEEEEEEEee
Q 026146           67 DRILLRPRPKKLG-----LGTAYIHGLKH----ASGSFVVIMDADLSH-HPKYLPSFIKKQLET----GASIVTGTRYVR  132 (242)
Q Consensus        67 ~~~~~~~~~~~~g-----~~~a~n~g~~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~  132 (242)
                      +.+.|+.++++.|     |++|+|.+++.    +++++|+.+|+|-.. +|+++.+.+-.+.++    +...|..+....
T Consensus       264 P~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~  343 (734)
T PLN02893        264 PNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFH  343 (734)
T ss_pred             CceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCccccc
Confidence            4789998886643     89999999996    679999999999995 689999999988754    344455444443


Q ss_pred             cCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhhcchHHHHH---------hhh---------------------
Q 026146          133 SGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED---------VIS---------------------  182 (242)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~---------~~~---------------------  182 (242)
                      +..... .+... ....+......+-+.+-+...|.+.++||+++..         +..                     
T Consensus       344 ~i~~~D-~y~~~-~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  421 (734)
T PLN02893        344 GINKND-IYAGE-LKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAH  421 (734)
T ss_pred             CCCcCC-CCcch-hHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhh
Confidence            322111 11111 1111122222233333344556666899999931         100                     


Q ss_pred             ------cc-----------cCCCcccchHHHHHHHHcCCceEEee-eeeeeccCCCcccc----hHHHHHHHHHHHHHhh
Q 026146          183 ------SC-----------VSKGYVFQMEMIVRACRKGYHIEEVP-ITFVDRVFGSSKLG----GSEIVEYLKGLLYLLI  240 (242)
Q Consensus       183 ------~~-----------~~~~~~~d~~~~~~~~~~g~~i~~~p-~~~~~~~~~~s~~~----~~~~~~~~~~~~~~~~  240 (242)
                            +.           ......||....++++.+||+.+|++ .....  .|.+..+    ..+..||..+.+++.+
T Consensus       422 ~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af--~G~aP~~l~~~l~Q~~RWa~G~lqI~~  499 (734)
T PLN02893        422 HVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAF--LGDSPINLHDVLNQQKRWSVGLLEVAF  499 (734)
T ss_pred             hccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhh--ccCCCCCHHHHHHHHHHHHhhhHHHHh
Confidence                  00           11223789999999999999999985 22211  1333322    3778888888888876


Q ss_pred             c
Q 026146          241 T  241 (242)
Q Consensus       241 ~  241 (242)
                      .
T Consensus       500 s  500 (734)
T PLN02893        500 S  500 (734)
T ss_pred             h
Confidence            4

>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]

Probab=98.85  E-value=4.4e-07  Score=68.02  Aligned_cols=191  Identities=10%  Similarity=0.004  Sum_probs=105.4

Q ss_pred             CCcEEEEEeCcccccc--H-HHHHH--HHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCC--c-
Q 026146            8 KNKYSIIIPTYNERLN--I-ALIVY--LIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKK--L-   78 (242)
Q Consensus         8 ~~~isiiip~~n~~~~--l-~~~l~--sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~--~-   78 (242)
                      ++++++|||.--..+.  + .+.+.  ++.+-..+ ..+++|++++.+.-  ...++++....+  ++.++.....  . 
T Consensus         1 m~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~--d~~i~~~i~~~~--~~~yl~~~s~~~F~   76 (346)
T COG4092           1 MQPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVM--DRLIRSYIDPMP--RVLYLDFGSPEPFA   76 (346)
T ss_pred             CCCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhH--HHHHHHHhcccc--ceEEEecCCCcccc
Confidence            4678999999764322  1 22222  11112122 56788888886522  144555554433  6777773322  2 


Q ss_pred             chHHHHHHHHhhcC----CCEEEEEeCCCCCCCCChHHHHHHHH----hcCC--cEEEEEEEeecCCccC--chhhHHHH
Q 026146           79 GLGTAYIHGLKHAS----GSFVVIMDADLSHHPKYLPSFIKKQL----ETGA--SIVTGTRYVRSGGVHG--WNLMRKLT  146 (242)
Q Consensus        79 g~~~a~n~g~~~a~----~d~i~~lD~D~~~~~~~l~~l~~~~~----~~~~--~~v~~~~~~~~~~~~~--~~~~~~~~  146 (242)
                      ..+...|.|+..+.    +++++|+|.|+..+.+-++++++...    ....  -++.+. +..+.....  ..+...+.
T Consensus        77 s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV-~~LNk~~~~v~f~~~d~f~  155 (346)
T COG4092          77 SETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPV-YHLNKADTQVFFDVEDMFL  155 (346)
T ss_pred             chhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeee-eecchhhhhHHHHHHHHhh
Confidence            34778888888875    89999999999999777777775432    1233  234433 333322100  11111111


Q ss_pred             HhHHH--HHHHHHhC-CCccccccchhhcchHHHHHhhhcccC-CCc-ccchHHHHHHHHcC
Q 026146          147 SRGAN--VLAQTLLW-PGVSDLTGSFRLYKKSVLEDVISSCVS-KGY-VFQMEMIVRACRKG  203 (242)
Q Consensus       147 ~~~~~--~~~~~~~~-~~~~~~~g~~~~~rr~~~~~~~~~~~~-~~~-~~d~~~~~~~~~~g  203 (242)
                      .....  .+...... .-.....++..++.|..+-..||+++. .++ +||.|+..|+...=
T Consensus       156 d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~~  217 (346)
T COG4092         156 DAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLYI  217 (346)
T ss_pred             hhHhhhhHHHHhCcccccccccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHHH
Confidence            11100  01110001 112334456668999999999998773 333 68999999876543

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.81  E-value=5.4e-07  Score=73.91  Aligned_cols=198  Identities=15%  Similarity=0.166  Sum_probs=120.1

Q ss_pred             CCcEEEEEeCcccc-----ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHH-----HHHHHh-CCCcEEEeeCCC
Q 026146            8 KNKYSIIIPTYNER-----LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVK-----QLQQLY-GEDRILLRPRPK   76 (242)
Q Consensus         8 ~~~isiiip~~n~~-----~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~-----~~~~~~-~~~~~~~~~~~~   76 (242)
                      ..+-.|++|+|||+     ..++.+.+|+.+.-...+|.+.|+.|..+.+ ....+     +++.+. ...++-|.+..+
T Consensus       143 ~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSDs~dpd-ialAEq~a~~~l~~e~~g~~~ifYRrRr~  221 (736)
T COG2943         143 LHRTAILMPIYNEDVNRVFAGLRATYESLAATGHAEHFDFFVLSDSRDPD-IALAEQKAWAELCRELGGEGNIFYRRRRR  221 (736)
T ss_pred             ccceeEEeeccccCHHHHHHHHHHHHHHHHhhCCcccceEEEEcCCCCch-hhhhHHHHHHHHHHHhCCCCceeeehHhh
Confidence            34589999999986     3456777888666444789999998854433 32222     233332 234677777777


Q ss_pred             Ccc-hHHHHHHHHhh--cCCCEEEEEeCCCCCCCCChHHHHHHHHhc-CCcEEEEEEEeecCCccCchhhHHHHHhHHHH
Q 026146           77 KLG-LGTAYIHGLKH--ASGSFVVIMDADLSHHPKYLPSFIKKQLET-GASIVTGTRYVRSGGVHGWNLMRKLTSRGANV  152 (242)
Q Consensus        77 ~~g-~~~a~n~g~~~--a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (242)
                      |.+ |+++...=...  +.++|++++|+|.++..+.+.++++.++.+ +++++.......+..    .+..+........
T Consensus       222 n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg~----TL~AR~qQFatrv  297 (736)
T COG2943         222 NVKRKAGNIADFCRRWGSAYSYMLVLDADSVMTGDCLVRLVRLMEANPDAGLIQTSPKASGGD----TLYARCQQFATRV  297 (736)
T ss_pred             hhcccccCHHHHHHHhCcccceEEEeecccccCchHHHHHHHHHhhCCCCceeecchhhcCcc----hHHHHHHHHHHHH
Confidence            766 44444333333  357999999999999999999999999864 566666544444432    3322222211111


Q ss_pred             --------HHHHHhCCCccccccchhhcchHHHHHhhhccc---CCC-----cccchHHHHHHHHcCCceEEeeee
Q 026146          153 --------LAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV---SKG-----YVFQMEMIVRACRKGYHIEEVPIT  212 (242)
Q Consensus       153 --------~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~---~~~-----~~~d~~~~~~~~~~g~~i~~~p~~  212 (242)
                              +.-+..++  +.+.|-+.+||.++|-+.-+...   ...     .+.|.-=..-+++.|+.+-..|+.
T Consensus       298 YGpl~~~GLawW~~~E--s~yWGHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~dL  371 (736)
T COG2943         298 YGPLFTAGLAWWQLGE--SHYWGHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYDL  371 (736)
T ss_pred             hchHHhhhhHHHhccc--cccccccceeechhhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhcCceEEEeccC
Confidence                    11111222  23567788999999888733222   112     233544445568889988877743

>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase

Probab=98.56  E-value=1.7e-06  Score=73.18  Aligned_cols=199  Identities=14%  Similarity=0.108  Sum_probs=125.5

Q ss_pred             CCCcEEEEEeCccc-cccHHHHHHHHHhhhcC--CCeEEEEEeCCC-CCC-----hHHHHHHHHHHhCCCcEEEeeCC-C
Q 026146            7 NKNKYSIIIPTYNE-RLNIALIVYLIFKHLRD--VDFEIIVVDDGS-PDG-----TQEVVKQLQQLYGEDRILLRPRP-K   76 (242)
Q Consensus         7 ~~~~isiiip~~n~-~~~l~~~l~sl~~~~~~--~~~eiivvd~~s-~d~-----t~~~l~~~~~~~~~~~~~~~~~~-~   76 (242)
                      +...|.||+|..++ .+.+...++...+....  .+..++||..++ .|.     ..+.++++..+++..++.++... +
T Consensus       245 ~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~~~~~  324 (499)
T PF05679_consen  245 ESTRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWISVKTG  324 (499)
T ss_pred             CCCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEEecCC
Confidence            45789999999998 88888888887665322  455666665554 221     23477788888888899999987 8


Q ss_pred             CcchHHHHHHHHhhcC-CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEee-cCCccCchhhHHHHHhHHHHHH
Q 026146           77 KLGLGTAYIHGLKHAS-GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVR-SGGVHGWNLMRKLTSRGANVLA  154 (242)
Q Consensus        77 ~~g~~~a~n~g~~~a~-~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  154 (242)
                      ++..+.|+..|++... .+.++|+|.|..+++++|.+.-....+ +..+..+..+.. +...........    ....  
T Consensus       325 ~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR~nti~-g~qvy~PI~Fs~y~p~~~~~~~~~~----~~~~--  397 (499)
T PF05679_consen  325 EFSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCRMNTIP-GKQVYFPIVFSQYNPDIVYAGKPPE----PDQF--  397 (499)
T ss_pred             CccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHHHhhhc-CcEEEEeeeccccCCcccccCCCCc----cccC--
Confidence            8899999999999764 678899999999999999998776543 444444433321 111100000000    0000  


Q ss_pred             HHHhCCCccc--cccchhhcchHHHHHh--hhccc-CCCc-ccchHHHHHHHHcC--CceEEeeeee
Q 026146          155 QTLLWPGVSD--LTGSFRLYKKSVLEDV--ISSCV-SKGY-VFQMEMIVRACRKG--YHIEEVPITF  213 (242)
Q Consensus       155 ~~~~~~~~~~--~~g~~~~~rr~~~~~~--~~~~~-~~~~-~~d~~~~~~~~~~g--~~i~~~p~~~  213 (242)
                      ......|...  -.|-..+++.+ +.++  |++.. ..+| +||+++.-+..+.|  ++|...+...
T Consensus       398 ~i~~~~G~w~~~gfg~~~~YksD-y~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~  463 (499)
T PF05679_consen  398 DISKDTGFWRRFGFGMVCFYKSD-YMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPG  463 (499)
T ss_pred             ccCCCCCccccCCCceEEEEhhh-hhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCC
Confidence            0001112211  12333345544 4555  44433 3444 68999999999999  8888887543

Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2

Probab=98.54  E-value=6.8e-07  Score=58.49  Aligned_cols=80  Identities=20%  Similarity=0.130  Sum_probs=54.9

Q ss_pred             ccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcc---h-HHHHHHHHhh-cC
Q 026146           18 YNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLG---L-GTAYIHGLKH-AS   92 (242)
Q Consensus        18 ~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g---~-~~a~n~g~~~-a~   92 (242)
                      +|+...|+..|......   .--+++|+||+|+|+|.++++++    +  .+.++.......   . ...++...+. ..
T Consensus         1 rne~~~L~~wl~~~~~l---G~d~i~i~d~~s~D~t~~~l~~~----~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (97)
T PF13704_consen    1 RNEADYLPEWLAHHLAL---GVDHIYIYDDGSTDGTREILRAL----P--GVGIIRWVDPYRDERRQRAWRNALIERAFD   71 (97)
T ss_pred             CChHHHHHHHHHHHHHc---CCCEEEEEECCCCccHHHHHHhC----C--CcEEEEeCCCccchHHHHHHHHHHHHhCCC
Confidence            57888899999988644   22379999999999999999886    2  344444333221   1 2233333334 36


Q ss_pred             CCEEEEEeCCCCCC
Q 026146           93 GSFVVIMDADLSHH  106 (242)
Q Consensus        93 ~d~i~~lD~D~~~~  106 (242)
                      ++|++++|+|..+.
T Consensus        72 ~dWvl~~D~DEfl~   85 (97)
T PF13704_consen   72 ADWVLFLDADEFLV   85 (97)
T ss_pred             CCEEEEEeeeEEEe
Confidence            89999999998843

>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.54  E-value=3.5e-07  Score=74.45  Aligned_cols=197  Identities=17%  Similarity=0.253  Sum_probs=96.0

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC---------C
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP---------K   76 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~---------~   76 (242)
                      ..+.+-|+|.++|+...+.+||++|++.... ..+.|||-.||+...+.+.++++..     .+.+++..         .
T Consensus        91 ~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~y~~-----~v~~i~~~~~~~i~~~~~  165 (434)
T PF03071_consen   91 KEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKSYGD-----QVTYIQHPDFSPITIPPK  165 (434)
T ss_dssp             ------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHGGGG-----GSEEEE-S--S-----TT
T ss_pred             CCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHHhhh-----hheeeecCCcCCceeCcc
Confidence            3567889999999999999999999987433 4678999999988888887777632     23333321         1


Q ss_pred             C------cchHHHHHHHHhh----cCCCEEEEEeCCCCCCCCChHHHHHHHH--hcCCcEEEEEEEeecCCccCchhhHH
Q 026146           77 K------LGLGTAYIHGLKH----ASGSFVVIMDADLSHHPKYLPSFIKKQL--ETGASIVTGTRYVRSGGVHGWNLMRK  144 (242)
Q Consensus        77 ~------~g~~~a~n~g~~~----a~~d~i~~lD~D~~~~~~~l~~l~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~  144 (242)
                      .      .+.+.-+-.|+..    -..+.++++.+|..+.|++++=+...+.  +.+..+.+-+.+..++. ..  +...
T Consensus       166 ~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawNdnG~-~~--~~~~  242 (434)
T PF03071_consen  166 EKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWNDNGK-EH--FVDD  242 (434)
T ss_dssp             -GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES--TT-B-GG--GS-T
T ss_pred             cccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEccccCCc-cc--cccC
Confidence            1      1123333334333    2468999999999999998876554432  34555555555544332 00  0000


Q ss_pred             HHHhHHHHHHHHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHH--HHHcCCceEEeeeeeeeccCCCcc
Q 026146          145 LTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVR--ACRKGYHIEEVPITFVDRVFGSSK  222 (242)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~--~~~~g~~i~~~p~~~~~~~~~~s~  222 (242)
                      ..       ...+.+...  ..|-.-+++|++++++...++.. +   +|.++|  ..+.|-.... |+.......|...
T Consensus       243 ~~-------~~~lyRsdf--fpglGWml~r~~w~el~~~Wp~~-~---WDdwmR~~~~rkgR~cIr-PeisRt~~fg~~G  308 (434)
T PF03071_consen  243 SR-------PSLLYRSDF--FPGLGWMLTRELWDELEPKWPKA-F---WDDWMRQPEQRKGRQCIR-PEISRTYHFGKKG  308 (434)
T ss_dssp             T--------TT-EEEESS-----SSEEEEHHHHHHHGGG--SS-----HHHHHTSHHHHTT-EEEE-ESSBSEEE--SSS
T ss_pred             CC-------ccceEeccc--CCchHHHhhHHHHHhhcccCCCC-C---chhhhcCccccCCCceee-ccCCCccccCcCC
Confidence            00       001111111  22333379999999986554432 2   344444  5666644444 5333223345555


Q ss_pred             cch
Q 026146          223 LGG  225 (242)
Q Consensus       223 ~~~  225 (242)
                      .+.
T Consensus       309 ~s~  311 (434)
T PF03071_consen  309 VSN  311 (434)
T ss_dssp             SS-
T ss_pred             cch
Confidence            543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.

>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function

Probab=98.43  E-value=7.8e-06  Score=62.59  Aligned_cols=123  Identities=17%  Similarity=0.154  Sum_probs=90.8

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCC--CChHHHHHHHHHHh--------CCCcEEEeeC
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSP--DGTQEVVKQLQQLY--------GEDRILLRPR   74 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~--d~t~~~l~~~~~~~--------~~~~~~~~~~   74 (242)
                      .+.++|-|++|..|.+..+++.++.|.+.+++ ..+.+-++.+.++  |.|.+.++...+..        +...+.+++.
T Consensus        22 ~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~~  101 (269)
T PF03452_consen   22 RNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILRK  101 (269)
T ss_pred             ccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEcC
Confidence            35689999999999999999999999999777 4677766666677  77888887554332        2235666664


Q ss_pred             CCCc--c------------------hHHHHHHHHhhc---CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEE
Q 026146           75 PKKL--G------------------LGTAYIHGLKHA---SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRY  130 (242)
Q Consensus        75 ~~~~--g------------------~~~a~n~g~~~a---~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~  130 (242)
                      +-..  |                  .+.|||..+..+   ..+||+++|+|.+ .+|+.++.++.    ++.++++++++
T Consensus       102 df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~----~~kdIivPn~~  177 (269)
T PF03452_consen  102 DFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIA----HDKDIIVPNCW  177 (269)
T ss_pred             CCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHh----CCCCEEcccee
Confidence            3211  1                  367778777776   3699999999998 56666666654    78899999887


Q ss_pred             ee
Q 026146          131 VR  132 (242)
Q Consensus       131 ~~  132 (242)
                      ..
T Consensus       178 ~~  179 (269)
T PF03452_consen  178 RR  179 (269)
T ss_pred             ec
Confidence            76

These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].

>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]

Probab=98.37  E-value=3.3e-06  Score=66.33  Aligned_cols=201  Identities=13%  Similarity=0.089  Sum_probs=124.7

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCC-CC--hHHHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSP-DG--TQEVVKQLQQLYGEDRILLRPRPKKLGLGT   82 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~-d~--t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~   82 (242)
                      -..|.|.+++|...+...+.....+....-. .+.+++|+-=|++ ++  -.+.+..+.++++  ++.++...+.+..+.
T Consensus       226 i~~pgih~i~pl~gr~~~f~rf~q~~c~~~d-~~l~l~vv~f~~se~e~ak~e~~tslra~f~--~~q~l~lngeFSRa~  302 (494)
T KOG3588|consen  226 IEDPGIHMIMPLRGRAAIFARFAQSICARGD-DRLALSVVYFGYSEDEMAKRETITSLRASFI--PVQFLGLNGEFSRAK  302 (494)
T ss_pred             ccCCCceEEEeccchHHHhhhhhHHHhccCC-CceEEEEEEecCCChHHHhhhHHHHHhhcCC--ceEEecccchhhhhH
Confidence            4568899999999998888877776544422 5677776655553 32  2234446666654  678887777788999


Q ss_pred             HHHHHHhhcCCCE-EEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhh-HHHHHhHHHHHHHHHhCC
Q 026146           83 AYIHGLKHASGSF-VVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLM-RKLTSRGANVLAQTLLWP  160 (242)
Q Consensus        83 a~n~g~~~a~~d~-i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  160 (242)
                      |+-.|.+.-+.+. ++|+|.|..+..++|.+.-... ..+..+.++..+..-..   ..+. ........+.+. .....
T Consensus       303 aL~vGAe~~~~nvLLFfcDVDi~FT~efL~rcr~Nt-~~gkqiyfPivFS~ynp---~ivy~~~~~~p~e~~~~-~~~~t  377 (494)
T KOG3588|consen  303 ALMVGAETLNANVLLFFCDVDIYFTTEFLNRCRLNT-ILGKQIYFPIVFSQYNP---EIVYEQDKPLPAEQQLV-IKKDT  377 (494)
T ss_pred             HHHhhHHHhccceeEEEeccceeehHHHHHHHhhcc-CCCceEEEEEEEeecCc---ceeecCCCCCchhHhee-ecccc
Confidence            9999999987665 5667889989888888765443 24555555433322110   0000 000000011100 00111


Q ss_pred             C-ccccccchhhcchHHHHHhhhccc-CCCc-ccchHHHHHHHHcCCceEEeeeeee
Q 026146          161 G-VSDLTGSFRLYKKSVLEDVISSCV-SKGY-VFQMEMIVRACRKGYHIEEVPITFV  214 (242)
Q Consensus       161 ~-~~~~~g~~~~~rr~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~g~~i~~~p~~~~  214 (242)
                      + +-++.-|..|.-|+-|.++|||+. -.+| +||.++..+....|.++...|+.-.
T Consensus       378 GfwRdfGfGmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl  434 (494)
T KOG3588|consen  378 GFWRDFGFGMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGL  434 (494)
T ss_pred             ccccccCCceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCce
Confidence            2 122333344566677788988854 5566 6899999999999999999986543

>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]

Probab=98.25  E-value=6.2e-05  Score=58.74  Aligned_cols=151  Identities=15%  Similarity=0.175  Sum_probs=98.1

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY   84 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~   84 (242)
                      ...+|+||||-+|+++.|...|.-|...+..  -++.|+||+.-..+                         .+..+.-+
T Consensus       149 ar~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL~y~iyVieQ~g~~-------------------------~FNRakL~  203 (372)
T KOG3916|consen  149 ARHKVAIIIPFRNREEHLRYLLHHLHPFLQRQRLDYRIYVIEQAGNK-------------------------PFNRAKLL  203 (372)
T ss_pred             ccceeEEEeecccHHHHHHHHHHHhhHHHHhhhhceeEEEEEecCCC-------------------------cccHHHhh
Confidence            3468999999999999998877765443222  57899999875432                         23466677


Q ss_pred             HHHHhhcC----CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCC
Q 026146           85 IHGLKHAS----GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWP  160 (242)
Q Consensus        85 n~g~~~a~----~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (242)
                      |.|+..|-    -|-++|=|.|..+..|.             .+..+..-.       ..+.        ..+.......
T Consensus       204 NVGf~eAlkd~~wdCfIFHDVDllPenDr-------------NlY~C~~~P-------RH~s--------va~dk~gy~L  255 (372)
T KOG3916|consen  204 NVGFLEALKDYGWDCFIFHDVDLLPENDR-------------NLYGCPEQP-------RHMS--------VALDKFGYRL  255 (372)
T ss_pred             hhHHHHHHHhcCCCEEEEecccccccCCC-------------CccCCCCCC-------cchh--------hhhhhccccc
Confidence            88877763    35577778886543321             111110011       1111        1111222233


Q ss_pred             CccccccchhhcchHHHHHhhhc-ccCCCc-ccchHHHHHHHHcCCceEEee
Q 026146          161 GVSDLTGSFRLYKKSVLEDVISS-CVSKGY-VFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       161 ~~~~~~g~~~~~rr~~~~~~~~~-~~~~~~-~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      ....++||..+++++-++++-|| ....+| +||=|++.|+..+|++|-.-|
T Consensus       256 PY~~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~  307 (372)
T KOG3916|consen  256 PYKEYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPP  307 (372)
T ss_pred             cchhhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCC
Confidence            44456788889999999999666 456677 789999999999999998776

>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]

Probab=98.04  E-value=1.8e-05  Score=69.41  Aligned_cols=139  Identities=21%  Similarity=0.204  Sum_probs=93.3

Q ss_pred             CEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCC--Cccccccchh
Q 026146           94 SFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWP--GVSDLTGSFR  170 (242)
Q Consensus        94 d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~  170 (242)
                      +||+++|+|+.+.|+.+..+++.+++ +.++.+.| +.....+ .-..+...+.....+.+.+.....  .+....||+.
T Consensus       442 ~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG-~I~~~~~-~w~v~~Q~FEY~Ish~l~Ka~ESvFG~VsclPGcfs  519 (862)
T KOG2571|consen  442 DYILVVDADTRLDPDALYHLVKVFDEDPQVGGACG-RILNKGG-SWVVAYQNFEYAISHNLQKATESVFGCVSCLPGCFS  519 (862)
T ss_pred             eEEEEecCCCccCcHHHHHHHHHhccCcccceecc-ccccCCC-ceEEeHHHHHHHHHHHHHHhhhhhceeEEecCchhH
Confidence            78899999999999999999999985 45666666 4433322 224445555555566655543332  4667889999


Q ss_pred             hcchHHHHHhh------h------cccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCcccch-HHHHHHHHH
Q 026146          171 LYKKSVLEDVI------S------SCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGG-SEIVEYLKG  234 (242)
Q Consensus       171 ~~rr~~~~~~~------~------~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s~~~~-~~~~~~~~~  234 (242)
                      ++|-+++..--      .      ......++||-.+|.++..+||.+.|++.+..+-..+++-..+ .+..+|..+
T Consensus       520 ~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y~a~s~a~t~~Pe~~~efl~QrrRW~~s  596 (862)
T KOG2571|consen  520 LYRASALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKYVAASDAETEAPESFLEFLNQRRRWLNS  596 (862)
T ss_pred             HHHHHHHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeeeeccccccccCcHhHHHHHHHhhhhccc
Confidence            99997766531      1      1124567899999999999999999998766554444433222 444444433

>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]

Probab=97.98  E-value=0.00019  Score=54.58  Aligned_cols=168  Identities=14%  Similarity=0.106  Sum_probs=97.3

Q ss_pred             EEEEEeCccccccHHHHHH-HHHhh---hcCCCeEEEEEeCCCCCChHHHHHHHHH---HhCCCcEEEeeCCCC-cc---
Q 026146           11 YSIIIPTYNERLNIALIVY-LIFKH---LRDVDFEIIVVDDGSPDGTQEVVKQLQQ---LYGEDRILLRPRPKK-LG---   79 (242)
Q Consensus        11 isiiip~~n~~~~l~~~l~-sl~~~---~~~~~~eiivvd~~s~d~t~~~l~~~~~---~~~~~~~~~~~~~~~-~g---   79 (242)
                      +=|..-.||.++.|+..+. ++.+.   ..+.+.-|-|++++|.|.|.++|+.+..   ..+ .+-.+...+.. ..   
T Consensus         2 ~fIA~~l~~~~~iL~~~~~~~ll~li~~LGp~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lg-v~~~i~~~~~~~~~~~~   80 (241)
T PF11735_consen    2 YFIAANLYNNEDILPSLWGDALLELIRFLGPENVFVSIYESGSWDGTKEALRALDAELDALG-VPHSIVLSDITHRDEIE   80 (241)
T ss_pred             EEEEEEcccCHhHHHHHHHHHHHHHHHHhCcCeEEEEEEeCCCCccHHHHHHHHHHHHHhCC-CCeEEEeCCCccccccc
Confidence            3455567888888876655 54443   3335677889999999999999998873   333 22333231111 11   


Q ss_pred             ----------hHHHHHHHHhhc---------CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEe---------
Q 026146           80 ----------LGTAYIHGLKHA---------SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYV---------  131 (242)
Q Consensus        80 ----------~~~a~n~g~~~a---------~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~---------  131 (242)
                                .+.-||.+++--         ..+.|+||+ |..+.+..+-+++..-...+++++++--+.         
T Consensus        81 ~~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~~~~~~~~aCamDf~~~~~fYD~w  159 (241)
T PF11735_consen   81 RPPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTRNRGNYDMACAMDFINPPKFYDTW  159 (241)
T ss_pred             ccchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhcCcccccchhhcccccCcccccee
Confidence                      368899998642         247899999 878887777777766554567877763331         


Q ss_pred             --ec--CCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhhcchHHHHHh
Q 026146          132 --RS--GGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV  180 (242)
Q Consensus       132 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~  180 (242)
                        +.  +.....+.+..+................+....+|..++..+.|..-
T Consensus       160 v~RD~~G~~~~~~~~p~f~~~~~~~~~~~~~pv~V~SCWnG~va~~a~pf~~~  212 (241)
T PF11735_consen  160 VLRDIEGDSFGSPFWPYFRSASSRDRLRRGDPVPVFSCWNGMVAFDAEPFLPP  212 (241)
T ss_pred             EEecCCCCccccccCcCcCCHHHHHHHhcCCCeeeecccCCcccccchhhccC
Confidence              11  11111111111111111111122223346667778888888888764

It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.

>PLN02189 cellulose synthase

Probab=97.93  E-value=2.2e-05  Score=69.96  Aligned_cols=53  Identities=17%  Similarity=0.226  Sum_probs=45.0

Q ss_pred             cEEEeeCCCCcc-----hHHHHHHHHhh----cCCCEEEEEeCCCCCC-CCChHHHHHHHHhc
Q 026146           68 RILLRPRPKKLG-----LGTAYIHGLKH----ASGSFVVIMDADLSHH-PKYLPSFIKKQLET  120 (242)
Q Consensus        68 ~~~~~~~~~~~g-----~~~a~n~g~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~  120 (242)
                      .+.|+.++++.|     |++|+|..++-    +.++||+.+|.|-.+. +..+...+-.+.++
T Consensus       499 ~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp  561 (1040)
T PLN02189        499 RLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDP  561 (1040)
T ss_pred             eeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCC
Confidence            588888877766     89999999954    5799999999999975 59999999888764

>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

Probab=97.91  E-value=0.00011  Score=54.57  Aligned_cols=100  Identities=15%  Similarity=0.096  Sum_probs=64.1

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCC--CCChHHHHHHHHHHhCCCcEEEeeCCCC-------c
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGS--PDGTQEVVKQLQQLYGEDRILLRPRPKK-------L   78 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s--~d~t~~~l~~~~~~~~~~~~~~~~~~~~-------~   78 (242)
                      |.|-+|.|||.+......+.+ |.+.+.. +++.+|||+|+.  ++.+.++|++.     +...+.+..+.+       .
T Consensus         1 p~i~vVTPTy~R~~Q~~~LtR-La~TL~lVp~l~WIVVEd~~~~t~~va~lL~~s-----gl~y~HL~~~~~~~~~~~~~   74 (223)
T cd00218           1 PTIYVVTPTYARPVQKAELTR-LAHTLRLVPPLHWIVVEDSEEKTPLVAELLRRS-----GLMYTHLNAKTPSDPTWLKP   74 (223)
T ss_pred             CeEEEECCCCccchhhHHHHH-HHHHHhcCCceEEEEEeCCCCCCHHHHHHHHHc-----CCceEEeccCCCCCcccCCc
Confidence            468899999997655443222 2222222 688999999987  23355555543     334444443322       1


Q ss_pred             chHHHHHHHHhhcC-------CCEEEEEeCCCCCCCCChHHHH
Q 026146           79 GLGTAYIHGLKHAS-------GSFVVIMDADLSHHPKYLPSFI  114 (242)
Q Consensus        79 g~~~a~n~g~~~a~-------~d~i~~lD~D~~~~~~~l~~l~  114 (242)
                      .....||.|++..+       .-+|.|.|+|...+-..++++-
T Consensus        75 rg~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~emR  117 (223)
T cd00218          75 RGVEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEMR  117 (223)
T ss_pred             ccHHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHHh
Confidence            23567999998753       3679999999999888888743

Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).

>PLN02458 transferase, transferring glycosyl groups

Probab=97.84  E-value=0.00014  Score=56.78  Aligned_cols=102  Identities=14%  Similarity=0.115  Sum_probs=64.1

Q ss_pred             CCCcEEEEEeCcc-ccccHHHHHHHHHhhhcC--CCeEEEEEeCCCC-CChHHHHHHHHHHhCCCcEEEeeCCCCcc---
Q 026146            7 NKNKYSIIIPTYN-ERLNIALIVYLIFKHLRD--VDFEIIVVDDGSP-DGTQEVVKQLQQLYGEDRILLRPRPKKLG---   79 (242)
Q Consensus         7 ~~~~isiiip~~n-~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~-d~t~~~l~~~~~~~~~~~~~~~~~~~~~g---   79 (242)
                      +.+.|-||.|||. +..... -|..|...+..  +++.+|||+|+.. ..+.++|++.     +...+.+..+.+..   
T Consensus       110 ~~rlIivVTPTY~rR~~Q~a-~LTRLahTL~lVp~pL~WIVVEd~~~t~~va~lLrrs-----Gl~y~HL~~k~~~~~~~  183 (346)
T PLN02458        110 PRRLVIIVTPISTKDRYQGV-LLRRLANTLRLVPPPLLWIVVEGQSDSEEVSEMLRKT-----GIMYRHLVFKENFTDPE  183 (346)
T ss_pred             CCceEEEECCCCCCcchhHH-HHHHHHHHHhcCCCCceEEEEeCCCCCHHHHHHHHHc-----CCceEEeccCCCCCCcc
Confidence            4566999999997 332222 23333222222  3789999998762 2344444443     34455555444432   


Q ss_pred             --hHHHHHHHHhhcC----CCEEEEEeCCCCCCCCChHHHH
Q 026146           80 --LGTAYIHGLKHAS----GSFVVIMDADLSHHPKYLPSFI  114 (242)
Q Consensus        80 --~~~a~n~g~~~a~----~d~i~~lD~D~~~~~~~l~~l~  114 (242)
                        ....||.|++..+    .-+|.|.|+|...+-+.++++-
T Consensus       184 ~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEmR  224 (346)
T PLN02458        184 AELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEIR  224 (346)
T ss_pred             chhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHHh
Confidence              2456999998874    5789999999998888877743

>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase

Probab=97.79  E-value=0.0083  Score=47.42  Aligned_cols=166  Identities=17%  Similarity=0.263  Sum_probs=91.2

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCC------hHHHHHHHHHHhCCCcEEEeeCC-------
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDG------TQEVVKQLQQLYGEDRILLRPRP-------   75 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~------t~~~l~~~~~~~~~~~~~~~~~~-------   75 (242)
                      ...+||+|+.|+.-.   +|+.+++... .+.-||||.|++...      ..+.++.++.... ..+.+++.+       
T Consensus        50 ~~maIVVP~KdE~l~---lleGVL~gIP-h~c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t~-r~~i~vHQkDp~la~A  124 (381)
T TIGR02460        50 GKTAIVVPVKNEKLH---LLEGVLSGIP-HECPIIIVSNSKREPPDRFKMEVDLIRHFSNLTH-RKIIIIHQKDPALAEA  124 (381)
T ss_pred             hCcEEEEEcCCCchh---HHhhHhhcCC-CCCeEEEEeCCCCCChhHHHHHHHHHHHHHHhhc-CceEEEEcCCHHHHHH
Confidence            358999999997632   4555555533 467899999987632      3345555554321 234444432       


Q ss_pred             ---------------CCcchHHHHHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHH------hcCCcEEEEEEEe
Q 026146           76 ---------------KKLGLGTAYIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQL------ETGASIVTGTRYV  131 (242)
Q Consensus        76 ---------------~~~g~~~a~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~------~~~~~~v~~~~~~  131 (242)
                                     -+-|++.++-.|+-.|+   .+||-|+|+|..++ +.+.+..+.+.      +.+..+|=-....
T Consensus       125 f~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiP-GaV~EYvk~yAaGf~ma~spy~MVRi~W~~  203 (381)
T TIGR02460       125 FKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFP-GAVNEYVKIYAAGFLMATSPYSMVRIHWRY  203 (381)
T ss_pred             HHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCCC-chHHHHHHHHHhhhcccCCCCeeEEEEecC
Confidence                           12367777777776665   59999999997764 55666665543      2333333211100


Q ss_pred             e----cCC--ccCchhhHHHHHhHHHHHHHHHhCCC---ccccccchhhcchHHHHHh
Q 026146          132 R----SGG--VHGWNLMRKLTSRGANVLAQTLLWPG---VSDLTGSFRLYKKSVLEDV  180 (242)
Q Consensus       132 ~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~rr~~~~~~  180 (242)
                      .    .++  ...+.-.....+++.+.+.....+..   +..-.+|=.+.++++++.+
T Consensus       204 KPKv~~~~lyF~~~GRVSElvnr~LN~l~~~~~gfet~ii~TGnAGEhAmt~~La~~l  261 (381)
T TIGR02460       204 KPKLTKGTLYFRKWGRVSEITNHYLNLLISEHTGFETDIIKTGNAGEHALTMKLAEIL  261 (381)
T ss_pred             CCceecCeEEEcCCCchhHHHHHHHHHHHHhhccccCcceecccchhhhhhHHHHhhC
Confidence            0    000  12223333344444444444332221   2222455568999999987

This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.

>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional

Probab=97.73  E-value=0.0097  Score=47.35  Aligned_cols=166  Identities=20%  Similarity=0.257  Sum_probs=89.9

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCC------hHHHHHHHHHHhCCCcEEEeeCC-------
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDG------TQEVVKQLQQLYGEDRILLRPRP-------   75 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~------t~~~l~~~~~~~~~~~~~~~~~~-------   75 (242)
                      ...+||||+.|+.-   .+|+.+++... .+.-||||.|++...      ..+.+++++.... ..+.+++.+       
T Consensus        51 ~~mAIVVP~KdE~l---~lleGVL~gIP-h~c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~-r~~i~vHQkDp~la~A  125 (393)
T PRK14503         51 GRMAIVVPVKNERL---KLLEGVLKGIP-HECPIIVVSNSKREPPDRFKLEVDLVRHFYRLTQ-RPIIIVHQKDPGLAEA  125 (393)
T ss_pred             hCcEEEEEcCCCch---hHHhhHhhcCC-CCCeEEEEeCCCCCCchHHHHHHHHHHHHHhhhc-CceEEEEcCCHHHHHH
Confidence            35899999999763   24555555533 467899999986632      3355555554321 234444432       


Q ss_pred             ---------------CCcchHHHHHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHH------hcCCcEEEEEEEe
Q 026146           76 ---------------KKLGLGTAYIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQL------ETGASIVTGTRYV  131 (242)
Q Consensus        76 ---------------~~~g~~~a~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~------~~~~~~v~~~~~~  131 (242)
                                     -+-|++.++-.|+-.|+   .+||-|+|+|..++ +.+.+..+.+.      +.+..+|=-....
T Consensus       126 f~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiP-GaV~EYvk~yAAGf~ma~spytMVRi~W~~  204 (393)
T PRK14503        126 LKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIP-GAVNEYVKIYAAGFLMAESPYTMVRIHWRY  204 (393)
T ss_pred             HHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCC-chHHHHHHHHHhhhcccCCCCceEEEEecC
Confidence                           12267777777776665   59999999997764 55666665543      2333333211110


Q ss_pred             e----cCC--ccCchhhHHHHHhHHHHHHHHHhCCC---ccccccchhhcchHHHHHh
Q 026146          132 R----SGG--VHGWNLMRKLTSRGANVLAQTLLWPG---VSDLTGSFRLYKKSVLEDV  180 (242)
Q Consensus       132 ~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~rr~~~~~~  180 (242)
                      .    .+.  ...+.-.....+++.+.+.....+..   +..-.+|=.+.++++++.+
T Consensus       205 KPKv~~~~lyF~k~GRvSel~nr~LN~l~~~~~gf~t~li~TGNAGEhAmt~~La~~l  262 (393)
T PRK14503        205 KPKVTEDRLYFRKWGRVSEITNRYLNQLISEYTGFETDIIKTGNAGEHAMTMKLAEIM  262 (393)
T ss_pred             CCceecCeEEEecCcchhHHHHHHHHHHHhhhccccccceecCCchhhHhhHHHHHhC
Confidence            0    000  11122223333344444443332221   2222355568999999987

>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ]

Probab=97.67  E-value=0.00039  Score=55.85  Aligned_cols=207  Identities=13%  Similarity=0.058  Sum_probs=118.2

Q ss_pred             EEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHH------------------HHHHHHHH--------
Q 026146           11 YSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQE------------------VVKQLQQL--------   63 (242)
Q Consensus        11 isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~------------------~l~~~~~~--------   63 (242)
                      |=|.|.+|... ....+|.++.++... ..+-|=||+....++..-                  ....+...        
T Consensus         2 IFvsiasyRD~-~c~~Tl~~~~~~A~~P~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   80 (343)
T PF11397_consen    2 IFVSIASYRDP-ECAPTLKDLFARATNPERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWPD   80 (343)
T ss_pred             EEEEEeeecCc-hHHHHHHHHHHhcCCCceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhccccccccc
Confidence            66888999875 488888888887655 456677776644332220                  01111110        


Q ss_pred             ----hCCCcEEEee--CCCCcchHHHHHHHHhhcCC-CEEEEEeCCCCCCCCChHHHHHHHHhcC--CcEEEEEEEeecC
Q 026146           64 ----YGEDRILLRP--RPKKLGLGTAYIHGLKHASG-SFVVIMDADLSHHPKYLPSFIKKQLETG--ASIVTGTRYVRSG  134 (242)
Q Consensus        64 ----~~~~~~~~~~--~~~~~g~~~a~n~g~~~a~~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~--~~~v~~~~~~~~~  134 (242)
                          ....+|+++.  ..+-.|...||+.+.+.-.+ +|++.+|+...+.++|=+.+++.++.-+  ..++.......+.
T Consensus        81 ~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~~~~  160 (343)
T PF11397_consen   81 GALCLRSDQIRVIRVDASEARGPCWARYLAQKLYRGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPGYEP  160 (343)
T ss_pred             ccccccCCeEEEEEeCHHHCcChHHHHHHHHHHhCCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCCccc
Confidence                0112455555  44567999999999988774 8999999999999999999998887532  2233221111011


Q ss_pred             ----CccCchh-h----HHHH-----HhHHHHHHHH--HhCC-CccccccchhhcchHHHHHhhhccc---CCCcccchH
Q 026146          135 ----GVHGWNL-M----RKLT-----SRGANVLAQT--LLWP-GVSDLTGSFRLYKKSVLEDVISSCV---SKGYVFQME  194 (242)
Q Consensus       135 ----~~~~~~~-~----~~~~-----~~~~~~~~~~--~~~~-~~~~~~g~~~~~rr~~~~~~~~~~~---~~~~~~d~~  194 (242)
                          ....... .    ..+.     ......+...  +..+ ......+++..-+-++++++ .+++   ....+|++.
T Consensus       161 ~~~~~~~~~~~~~~lc~~~~~~~g~~~~~~~~~~~~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~GEE~~  239 (343)
T PF11397_consen  161 DGGQPEPEKTTVPRLCAARFGPDGMVRLGARWIKPAPKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFDGEEIS  239 (343)
T ss_pred             ccCCccccCCcccEEEEeEECCCCcEeecceecccccccCCCeeeceecccEEEcchhheecC-CCCCCcccccccHHHH
Confidence                0000000 0    0000     0000000000  0111 12334555554555556666 3433   345588999


Q ss_pred             HHHHHHHcCCceEEeeeeeeeccCC
Q 026146          195 MIVRACRKGYHIEEVPITFVDRVFG  219 (242)
Q Consensus       195 ~~~~~~~~g~~i~~~p~~~~~~~~~  219 (242)
                      ++.|+.-.||.++.-+..+..|.+.
T Consensus       240 ~aaRlwT~GYD~Y~P~~~v~~H~Y~  264 (343)
T PF11397_consen  240 MAARLWTHGYDFYSPTRNVLFHLYS  264 (343)
T ss_pred             HHHHHHHcCCccccCCCceeEEEcc
Confidence            9999999999998888766666555

>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]

Probab=97.65  E-value=0.00046  Score=53.46  Aligned_cols=105  Identities=16%  Similarity=0.180  Sum_probs=70.3

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCC--CCChHHHHHHHHHHhCCCcEEEeeCCCCcch----
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGS--PDGTQEVVKQLQQLYGEDRILLRPRPKKLGL----   80 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s--~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~----   80 (242)
                      .+.|-||.|||++.....+ |..|...+.. ++..+|||+||+  +..+..+|++-     +...+++..+.+.+.    
T Consensus        86 ~~~iivVTPTY~R~~q~~~-LtRlanTL~~V~nLhWIVVEd~~~~~p~v~~~L~rt-----gl~ythl~~~t~~~~~~~r  159 (330)
T KOG1476|consen   86 LPTIIVVTPTYVRPVQAAE-LTRLANTLRLVPNLHWIVVEDGEGTTPEVSGILRRT-----GLPYTHLVHKTPMGYKARR  159 (330)
T ss_pred             CccEEEEcccccchhHHHH-HHHHHHHHhhcCCeeEEEEecCCCCCHHHHHHHHHc-----CCceEEEeccCCCCCcccc
Confidence            6789999999998744432 2223222222 689999999985  23455555553     345555555555552    


Q ss_pred             -HHHHHHHHhhcC---------CCEEEEEeCCCCCCCCChHHHHHHHHh
Q 026146           81 -GTAYIHGLKHAS---------GSFVVIMDADLSHHPKYLPSFIKKQLE  119 (242)
Q Consensus        81 -~~a~n~g~~~a~---------~d~i~~lD~D~~~~~~~l~~l~~~~~~  119 (242)
                       ...||.|++..+         .-+|.|.|+|...+-+.+++ ++..+.
T Consensus       160 g~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e-iR~v~~  207 (330)
T KOG1476|consen  160 GWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE-IRNVKK  207 (330)
T ss_pred             chhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH-Hhccce
Confidence             578999997654         46788999999999888888 555443

>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []

Probab=97.65  E-value=0.00015  Score=56.65  Aligned_cols=112  Identities=14%  Similarity=0.171  Sum_probs=71.8

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH-hCC-CcEEEeeCCC--CcchH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL-YGE-DRILLRPRPK--KLGLG   81 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~-~~~-~~~~~~~~~~--~~g~~   81 (242)
                      .....+.|+||+-+.  .|...+++-....  ..+++|||-|+...+..++.+.+.-+ +.. .-.+++-.+.  .+.-.
T Consensus         5 ~~~~~~divi~~~~~--~l~~~~~~wr~~~--~~~hliiv~d~~~~~~~~~p~g~~~~~y~~~di~~~lg~~~~i~~~~~   80 (348)
T PF03214_consen    5 ILDDEVDIVIPALRP--NLTDFLEEWRPFF--SPYHLIIVQDPDPNEEIKVPEGFDYEVYNRNDIERVLGAKTLIPFKGD   80 (348)
T ss_pred             cccCcccEEeecccc--cHHHHHHHHHHhh--cceeEEEEeCCCccccccCCcccceeeecHhhHHhhcCCccccccccc
Confidence            445679999999773  4667777776654  57899999888654433333221000 000 0001111111  12346


Q ss_pred             HHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcC
Q 026146           82 TAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETG  121 (242)
Q Consensus        82 ~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~  121 (242)
                      +.||.|+-.++.+|++++|+|+.+..+..-..+..+.++.
T Consensus        81 a~R~fGyL~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh~  120 (348)
T PF03214_consen   81 ACRNFGYLVSKKDYIVSIDDDCLPAKDDFGTHIDAVAQHV  120 (348)
T ss_pred             chhhhHhhhcccceEEEEccccccccCCccceehhhhccc
Confidence            6899999999999999999999988888877777776643

It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction

>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit

Probab=97.62  E-value=0.00015  Score=65.22  Aligned_cols=53  Identities=21%  Similarity=0.273  Sum_probs=44.9

Q ss_pred             cEEEeeCCCCcc-----hHHHHHHHHhh----cCCCEEEEEeCCCCCC-CCChHHHHHHHHhc
Q 026146           68 RILLRPRPKKLG-----LGTAYIHGLKH----ASGSFVVIMDADLSHH-PKYLPSFIKKQLET  120 (242)
Q Consensus        68 ~~~~~~~~~~~g-----~~~a~n~g~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~  120 (242)
                      .+.|+.++.+.|     |++|+|..++-    +.++||+.+|.|-.+. +..+...+-.+.++
T Consensus       517 ~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp  579 (1079)
T PLN02638        517 RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDP  579 (1079)
T ss_pred             ceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCc
Confidence            678888777766     89999999954    4799999999998865 99999999988764

>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis

Probab=97.45  E-value=0.0013  Score=52.12  Aligned_cols=103  Identities=25%  Similarity=0.372  Sum_probs=59.1

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCC---CC---hHHHHHHHHHHhCCCcEEEeeCC-------
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSP---DG---TQEVVKQLQQLYGEDRILLRPRP-------   75 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~---d~---t~~~l~~~~~~~~~~~~~~~~~~-------   75 (242)
                      .+.+||||+.|+.-   .+++.+++... .+.-||||.|++.   |.   -.+.++++..... ..+.+++.+       
T Consensus        50 ~~maIVVP~KnE~l---~lleGVL~gIP-h~C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~-r~~~~vHQkDp~lA~A  124 (381)
T PF09488_consen   50 SKMAIVVPCKNEKL---KLLEGVLSGIP-HDCLIIVVSNSSREPVDRFKMEVDLLKHFCRLTR-RQIIIVHQKDPGLAEA  124 (381)
T ss_dssp             TTEEEEEEESS--H---HHHHHHHHCS--TTSEEEEEE---CSSSCHHHHHHHHHHHHHHHCT---EEEEETT-HHHHHH
T ss_pred             hCcEEEEECCCCch---hhhhhhhhcCC-CCCeEEEEECCCCCCccHHHHHHHHHHHHHHhhc-CceEEEecCCHHHHHH
Confidence            36899999999752   34555555533 4678999999887   43   3456666665432 345555533       


Q ss_pred             ---------------CCcchHHHHHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHH
Q 026146           76 ---------------KKLGLGTAYIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQ  117 (242)
Q Consensus        76 ---------------~~~g~~~a~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~  117 (242)
                                     -+-|++.++-.|+-.|+   .+||-|+|+|..++ +.+-+..+.+
T Consensus       125 f~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiP-GaV~EYvk~y  183 (381)
T PF09488_consen  125 FKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIP-GAVNEYVKDY  183 (381)
T ss_dssp             HHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-H-HHHHHHHHHH
T ss_pred             HHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCc-chHHHHHHHH
Confidence                           12367888888887765   59999999996654 4455555443

Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.

>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases

Probab=97.41  E-value=0.00012  Score=45.46  Aligned_cols=50  Identities=18%  Similarity=0.144  Sum_probs=35.3

Q ss_pred             ccccccchhhcchHHHHHhhhccc-CCCc-ccchHHHHHHHHcCCceEEeee
Q 026146          162 VSDLTGSFRLYKKSVLEDVISSCV-SKGY-VFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       162 ~~~~~g~~~~~rr~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      .....||.++++|+.+.+++|+++ ..+| +||.||..|+..+|+++..++.
T Consensus        16 ~~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~   67 (78)
T PF02709_consen   16 YPNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPG   67 (78)
T ss_dssp             STT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SST
T ss_pred             CCCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCC
Confidence            355678888999999999999976 4566 6899999999999999888763

The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....

>PLN02195 cellulose synthase A

Probab=97.38  E-value=0.0005  Score=61.34  Aligned_cols=53  Identities=15%  Similarity=0.197  Sum_probs=41.8

Q ss_pred             cEEEeeCCCCcc-----hHHHHHHHHhhc----CCCEEEEEeCCCCCCC-CChHHHHHHHHhc
Q 026146           68 RILLRPRPKKLG-----LGTAYIHGLKHA----SGSFVVIMDADLSHHP-KYLPSFIKKQLET  120 (242)
Q Consensus        68 ~~~~~~~~~~~g-----~~~a~n~g~~~a----~~d~i~~lD~D~~~~~-~~l~~l~~~~~~~  120 (242)
                      .+.|+.++++.|     |++|+|.+++.+    .++||+.+|.|-.+.+ +++...+-.+.+.
T Consensus       420 ~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~  482 (977)
T PLN02195        420 RLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDP  482 (977)
T ss_pred             eeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCc
Confidence            456666655555     899999999854    5999999999987654 7999999888764

>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni []

Probab=97.28  E-value=0.0018  Score=50.53  Aligned_cols=118  Identities=19%  Similarity=0.169  Sum_probs=81.4

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEE-E-----eeCCC--Ccch
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRIL-L-----RPRPK--KLGL   80 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~-~-----~~~~~--~~g~   80 (242)
                      -.++..|-+.|++..|+++|+|++....    |.||.=|.|+|+|.+++.++++.+|.---. +     +.++.  .-..
T Consensus        87 l~~~~~iRvKnE~~tl~~si~S~Lpai~----~gVI~yNdc~D~t~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n~l  162 (347)
T PF06306_consen   87 LNPWAFIRVKNEAMTLAESIESILPAID----EGVIGYNDCTDGTEEIILEFCKKYPSFIPIKYPYEVIIKNPKSEENSL  162 (347)
T ss_pred             CCcceEEEEcchhhhHHHHHHHHHHHHh----ccEEEeecCCCCHHHHHHHHHHhCcccccccCcchhhccCCchhhhhh
Confidence            4578899999999999999999987743    788888999999999999999999842111 1     11111  0013


Q ss_pred             HHHHHHHHhhc-CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEe
Q 026146           81 GTAYIHGLKHA-SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYV  131 (242)
Q Consensus        81 ~~a~n~g~~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~  131 (242)
                      ..=.|.++... +.+|++-+|+|-+.++.-|-+..-.. +...+++.-++..
T Consensus       163 ~~YYNy~ls~ipk~~w~iKID~DhIy~~~KL~ksfY~p-k~~~~~v~YsRIN  213 (347)
T PF06306_consen  163 YNYYNYVLSFIPKNEWAIKIDADHIYDTKKLYKSFYIP-KNDYDVVSYSRIN  213 (347)
T ss_pred             hhhhhhhhcccccceEEEEeccceeecHHHHhhhheee-ccccceEEeccee
Confidence            33456666664 58999999999997776553333222 3456666554443

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.20  E-value=0.0012  Score=49.02  Aligned_cols=179  Identities=17%  Similarity=0.095  Sum_probs=96.9

Q ss_pred             cHHHHHHHHHhhhcCCCeEEEEEeCCCC--CC-hHHHHHHHHHHhCCCcEEEeeCCCC---cc--hHHHHHHHHhhcC-C
Q 026146           23 NIALIVYLIFKHLRDVDFEIIVVDDGSP--DG-TQEVVKQLQQLYGEDRILLRPRPKK---LG--LGTAYIHGLKHAS-G   93 (242)
Q Consensus        23 ~l~~~l~sl~~~~~~~~~eiivvd~~s~--d~-t~~~l~~~~~~~~~~~~~~~~~~~~---~g--~~~a~n~g~~~a~-~   93 (242)
                      .|+++..+...+.. ..+.++++-..+.  +. ..+.+.+=.+.+.  .+........   ..  .-.+++.+.++.. .
T Consensus         5 ~IR~TW~~~~~~~~-~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~--Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~~   81 (195)
T PF01762_consen    5 AIRETWGNQRNFKG-VRVKVVFVVGESPNSDSDLQEALQEEAEKYG--DILQGDFVDSYRNLTLKTLAGLKWASKHCPNA   81 (195)
T ss_pred             HHHHHHhcccccCC-CcEEEEEEEecCCCCcHHHHHHhhhhhhhcC--ceEeeecccccchhhHHHHHHHHHHHhhCCch
Confidence            34555554433222 4566666666555  32 2333443334444  4555554332   22  3456667777766 8


Q ss_pred             CEEEEEeCCCCCCCCChHHHHHHH-HhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhhc
Q 026146           94 SFVVIMDADLSHHPKYLPSFIKKQ-LETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLY  172 (242)
Q Consensus        94 d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  172 (242)
                      +|++.+|+|..+.+.-|.+.+... .......+.|........... +     ...+...........-...+.|++.++
T Consensus        82 ~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~-~-----~~kw~v~~~~y~~~~yP~y~~G~~yvl  155 (195)
T PF01762_consen   82 KYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRD-P-----SSKWYVSEEEYPDDYYPPYCSGGGYVL  155 (195)
T ss_pred             hheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccc-c-----ccCceeeeeecccccCCCcCCCCeEEe
Confidence            999999999999988888877765 222334444433322111000 0     000000000000111233456888899


Q ss_pred             chHHHHHhhhcc--cCCCcccchHHHHHHHHcCCceEEee
Q 026146          173 KKSVLEDVISSC--VSKGYVFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       173 rr~~~~~~~~~~--~~~~~~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      ++++++.+....  ......||.-+..-+...|.+....|
T Consensus       156 s~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  156 SSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPIHDP  195 (195)
T ss_pred             cHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCccCCC
Confidence            999999984432  23344789888888888887765543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PLN02248 cellulose synthase-like protein

Probab=97.17  E-value=0.00046  Score=62.27  Aligned_cols=53  Identities=15%  Similarity=0.167  Sum_probs=42.8

Q ss_pred             CcEEEeeCCCCcc-----hHHHHHHHHh----hcCCCEEEEEeCCCCCC-CCChHHHHHHHHh
Q 026146           67 DRILLRPRPKKLG-----LGTAYIHGLK----HASGSFVVIMDADLSHH-PKYLPSFIKKQLE  119 (242)
Q Consensus        67 ~~~~~~~~~~~~g-----~~~a~n~g~~----~a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~  119 (242)
                      +.+.|+.++++.|     |++|+|..++    .+.++||+.+|.|-.+. +..+...+-.+.+
T Consensus       585 P~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD  647 (1135)
T PLN02248        585 PMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMD  647 (1135)
T ss_pred             ceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheec
Confidence            3677777776666     8999998887    45699999999999954 5699999988876

>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum

Probab=97.09  E-value=0.0056  Score=48.24  Aligned_cols=111  Identities=17%  Similarity=0.238  Sum_probs=67.7

Q ss_pred             CCcEEEEEeCccc--cccHHHHHHHHHhhhcC---CCeEEEEE-eCCCCCChHHHHHHHHHHhC----CCcEEEeeCC--
Q 026146            8 KNKYSIIIPTYNE--RLNIALIVYLIFKHLRD---VDFEIIVV-DDGSPDGTQEVVKQLQQLYG----EDRILLRPRP--   75 (242)
Q Consensus         8 ~~~isiiip~~n~--~~~l~~~l~sl~~~~~~---~~~eiivv-d~~s~d~t~~~l~~~~~~~~----~~~~~~~~~~--   75 (242)
                      ..+++|-||+-.+  ..+|..+|.||.....+   ...-|+|. .|...+.-..+.+++...++    ...+.++..+  
T Consensus        51 ~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp~~~~~~~~~i~~~f~~~i~sG~l~VI~~p~~  130 (297)
T PF04666_consen   51 GKKLCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDPDYHPSVAQNISTRFADHIESGLLEVISPPPS  130 (297)
T ss_pred             CCeEEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCChhhhHHHHHHHHHHhHHHHHhCceEEEecccc
Confidence            4569999999774  57899999999998766   23333333 33222233333433333221    1133333322  


Q ss_pred             ------------------------CCcchHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhc
Q 026146           76 ------------------------KKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET  120 (242)
Q Consensus        76 ------------------------~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~  120 (242)
                                              +|.-.+..++.+  ...++|++.|.||.+..++|+..+...+.+.
T Consensus       131 ~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~--~~~~~YyL~LEDDVia~~~f~~~i~~~v~~~  197 (297)
T PF04666_consen  131 YYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYC--QNLGDYYLQLEDDVIAAPGFLSRIKRFVEAW  197 (297)
T ss_pred             cCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHH--HhcCCeEEEecCCeEechhHHHHHHHHHHHh
Confidence                                    222233333333  2358999999999999999999999888753

N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane

>PLN03180 reversibly glycosylated polypeptide; Provisional

Probab=96.93  E-value=0.0014  Score=51.41  Aligned_cols=102  Identities=17%  Similarity=0.230  Sum_probs=61.7

Q ss_pred             cccCCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChH-------------HHHHHHHHHhCCCcE
Q 026146            3 ETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQ-------------EVVKQLQQLYGEDRI   69 (242)
Q Consensus         3 ~~~~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~-------------~~l~~~~~~~~~~~~   69 (242)
                      .++.....+.|||||-.+.    .++++.....  ..+++|+|-++....+.             +-..+....    .-
T Consensus         5 ~~~~~~~evdIVi~TI~~~----~fL~~~r~~l--~~~h~iiV~d~D~~~~~~~~~G~d~~vy~r~d~~~~Lg~----~~   74 (346)
T PLN03180          5 PAPLLKDELDIVIPTIRNL----DFLEMWRPFF--QPYHLIIVQDGDPSKEIKVPEGFDYELYNRNDINRILGP----KA   74 (346)
T ss_pred             cCCCCCCcceEEEeccCch----hHHHHHHHhc--CcccEEEEecCCcccceeccCCCceeecCHHHHHhhhcc----cc
Confidence            3445567899999996653    4555555443  34566666664322221             111222211    11


Q ss_pred             EEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCCCCCC-------ChHHHHHHHH
Q 026146           70 LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPK-------YLPSFIKKQL  118 (242)
Q Consensus        70 ~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~-------~l~~l~~~~~  118 (242)
                      +.+.    ..-.+.+|.|+-.++.+|++++|+|+.+..+       ++++.+..+.
T Consensus        75 ~~Ip----~~~~a~R~fGyL~s~~~yivsiDDD~~Pa~d~~g~~i~~~~qH~~NL~  126 (346)
T PLN03180         75 SCIS----FKDSACRCFGYLVSKKKYIFTIDDDCFVAKDPSGKLINALEQHIKNLL  126 (346)
T ss_pred             cccc----cCcccchhhhheeecceEEEEECCCCCCCCCCccccccHHHHHHHhcC
Confidence            2222    2345688999999999999999999997766       5666665554

>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B

Probab=96.89  E-value=0.0061  Score=43.55  Aligned_cols=98  Identities=17%  Similarity=0.183  Sum_probs=71.5

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhc-CCCEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHA-SGSFV   96 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a-~~d~i   96 (242)
                      +....+..+++.+.+..   .-+|+|+-+.  +   + +.+....   ..+.++..+ ...|...++-.|+... ..+.+
T Consensus        22 ~g~~li~~~l~~l~~~~---~~~Ivvv~~~--~---~-~~~~~~~---~~~~~v~~~~~~~G~~~sl~~a~~~~~~~~~v   89 (160)
T PF12804_consen   22 GGKPLIERVLEALREAG---VDDIVVVTGE--E---E-IYEYLER---YGIKVVVDPEPGQGPLASLLAALSQLPSSEPV   89 (160)
T ss_dssp             TTEEHHHHHHHHHHHHT---ESEEEEEEST--H---H-HHHHHTT---TTSEEEE-STSSCSHHHHHHHHHHTSTTSSEE
T ss_pred             CCccHHHHHHHHhhccC---CceEEEecCh--H---H-HHHHHhc---cCceEEEeccccCChHHHHHHHHHhcccCCCc
Confidence            66678899999997662   1277877665  1   2 2222222   246666654 3589999999999999 89999


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGASIVTGT  128 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~  128 (242)
                      +++..|.. ++++.+..+++.+.+.+.++++..
T Consensus        90 lv~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~  122 (160)
T PF12804_consen   90 LVLPCDQPFLSPELLRRLLEALEKSPADIVVPV  122 (160)
T ss_dssp             EEEETTETTS-HHHHHHHHHHHHHTTTSEEEEE
T ss_pred             EEEeCCccccCHHHHHHHHHHHhccCCcEEEEE
Confidence            99999996 799999999999987778887653

...

>PLN02917 CMP-KDO synthetase

Probab=96.88  E-value=0.013  Score=46.41  Aligned_cols=191  Identities=12%  Similarity=0.034  Sum_probs=94.5

Q ss_pred             CCcEEEEEeCccc--------------cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee
Q 026146            8 KNKYSIIIPTYNE--------------RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP   73 (242)
Q Consensus         8 ~~~isiiip~~n~--------------~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~   73 (242)
                      .+++.+|||+...              ...+...++.+.+.. ..+ .|||..+  .+..    .+.....   .+.++.
T Consensus        45 ~~~i~aIIpA~G~SsR~~~K~L~~i~GkPLL~~vi~~a~~~~-~~~-~VVV~~~--~e~I----~~~~~~~---~v~vi~  113 (293)
T PLN02917         45 RSRVVGIIPARFASSRFEGKPLVHILGKPMIQRTWERAKLAT-TLD-HIVVATD--DERI----AECCRGF---GADVIM  113 (293)
T ss_pred             CCcEEEEEecCCCCCCCCCCCeeeECCEEHHHHHHHHHHcCC-CCC-EEEEECC--hHHH----HHHHHHc---CCEEEe
Confidence            3578888888643              344556666665431 122 3444422  2222    2232222   233333


Q ss_pred             --CCCCcchHHHHHHHHhhcC--CCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEe----ecCCccCchh--h
Q 026146           74 --RPKKLGLGTAYIHGLKHAS--GSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYV----RSGGVHGWNL--M  142 (242)
Q Consensus        74 --~~~~~g~~~a~n~g~~~a~--~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~----~~~~~~~~~~--~  142 (242)
                        .....|.+.+ ..|++...  .|+++++++|.. ++++.++++++.+.++ .++++.+...    .+....+...  .
T Consensus       114 ~~~~~~~GT~~~-~~a~~~l~~~~d~Vlil~gD~PlI~~~tI~~li~~~~~~-~~~iv~t~~~~~~~~~~~~ygrv~vv~  191 (293)
T PLN02917        114 TSESCRNGTERC-NEALKKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA-PDAVFSTAVTSLKPEDASDPNRVKCVV  191 (293)
T ss_pred             CCcccCCchHHH-HHHHHhccCCCCEEEEecCCcCCCCHHHHHHHHHHHHhc-CCceEEEEeeecCHHHhcCCCceEEEE
Confidence              2333454444 46776654  689999999988 8899999999988654 3443332211    1111111110  0


Q ss_pred             HHHHH-hHH--HHHH--HH--HhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeee
Q 026146          143 RKLTS-RGA--NVLA--QT--LLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       143 ~~~~~-~~~--~~~~--~~--~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      ..-.. .++  ....  +.  .....+.....|.++|+++.+..+........-.|.+---+++.+.|+++..++.
T Consensus       192 ~~~g~alyfsr~~Ipe~kd~~~~~~~i~~~n~Giy~f~~~~L~~l~~l~~~n~e~e~yLtdl~~le~G~~i~~~~~  267 (293)
T PLN02917        192 DNQGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDAKFLKIYPELPPTPLQLEEDLEQLKVLENGYKMKVIKV  267 (293)
T ss_pred             CCCCeEEEeecCcCCcCCCcccccccceEEEEEEEEeCHHHHHHHHcCCCCcccchhccHHHHHHhCCCceEEEEe
Confidence            00000 000  0000  00  0012234557788899999999653222221112221112348899999987765

>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A

Probab=96.82  E-value=0.003  Score=43.17  Aligned_cols=76  Identities=20%  Similarity=0.320  Sum_probs=47.9

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhc--CCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY   84 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~--~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~   84 (242)
                      ...+++||||-+|+++.|...|..+..-+.  +..+.|+||+...+.                         .+.+|.-+
T Consensus        45 ~~~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~~y~I~vieQ~~~~-------------------------~FNRg~L~   99 (136)
T PF13733_consen   45 PRHKVAIIIPYRDREEHLRIFLPHLHPFLQRQQLDYRIFVIEQVDNG-------------------------PFNRGKLM   99 (136)
T ss_dssp             -S-EEEEEEEESS-HHHHHHHHHHHHHHHHHTT-EEEEEEEEE-SSS----------------------------HHHHH
T ss_pred             cccceEEEEEeCCHHHHHHHHHHHHHHHHhhCcceEEEEEEeeccCC-------------------------CCchhhhh
Confidence            346899999999999988877775533221  157899999875321                         23466677


Q ss_pred             HHHHhhcC----CCEEEEEeCCCCCCC
Q 026146           85 IHGLKHAS----GSFVVIMDADLSHHP  107 (242)
Q Consensus        85 n~g~~~a~----~d~i~~lD~D~~~~~  107 (242)
                      |.|+..|.    .|+++|=|.|..+..
T Consensus       100 NvGf~eA~~~~~~dc~ifHDVDllP~~  126 (136)
T PF13733_consen  100 NVGFLEALKDDDFDCFIFHDVDLLPEN  126 (136)
T ss_dssp             HHHHHHHHHHS--SEEEEE-TTEEESB
T ss_pred             hHHHHHHhhccCCCEEEEecccccccC
Confidence            77777663    588999999977443

...

>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function

Probab=96.81  E-value=0.0042  Score=47.30  Aligned_cols=90  Identities=19%  Similarity=0.245  Sum_probs=63.0

Q ss_pred             HHHHHHHHhhhcCCCeEEEEE-eCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---CCCEEEE--
Q 026146           25 ALIVYLIFKHLRDVDFEIIVV-DDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---SGSFVVI--   98 (242)
Q Consensus        25 ~~~l~sl~~~~~~~~~eiivv-d~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---~~d~i~~--   98 (242)
                      .-||.||..|+. ++|.++|+ ++...+.-.+.|+++.+.+|+  ++++..+. .....+...+++.+   .+++++-  
T Consensus        45 ~~~LpSl~~QTd-~dF~~lv~~~~~~P~~~~~rL~~l~~~~p~--~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~R  120 (234)
T PF11316_consen   45 TYCLPSLRAQTD-QDFTWLVLFDDDLPEPYRERLRDLLADYPQ--FRIVFRPP-GPHRDAMRRAINAARRDGADPVLQFR  120 (234)
T ss_pred             HHHhhHHHhccC-CCeEEEEEECCCCCHHHHHHHHHHhccCCC--cEEEecCC-chHHHHHHHHHhhhccCCCCEEEEEE
Confidence            348999999987 47887774 555566677788888888773  44444332 23556666666433   3566554  


Q ss_pred             EeCCCCCCCCChHHHHHHHH
Q 026146           99 MDADLSHHPKYLPSFIKKQL  118 (242)
Q Consensus        99 lD~D~~~~~~~l~~l~~~~~  118 (242)
                      ||+|+-+..++++.+-+...
T Consensus       121 LDdDDAl~~dFV~rlr~~a~  140 (234)
T PF11316_consen  121 LDDDDALHRDFVARLRRAAA  140 (234)
T ss_pred             ECCcchhhHHHHHHHHHHHH
Confidence            49999999999999998874

>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU

Probab=96.81  E-value=0.014  Score=44.25  Aligned_cols=102  Identities=19%  Similarity=0.188  Sum_probs=67.8

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--   92 (242)
                      +|.-+ ...+..+++++.+.   .-.+++||-...    .+.+.++...   ..+.++..+...|.+.+...|+....  
T Consensus        21 ~~v~g-kpli~~~i~~l~~~---~i~~i~iv~~~~----~~~i~~~~~~---~~~~~~~~~~~~g~~~ai~~a~~~~~~~   89 (229)
T cd02540          21 HPLAG-KPMLEHVLDAARAL---GPDRIVVVVGHG----AEQVKKALAN---PNVEFVLQEEQLGTGHAVKQALPALKDF   89 (229)
T ss_pred             ceeCC-ccHHHHHHHHHHhC---CCCeEEEEECCC----HHHHHHHhCC---CCcEEEECCCCCCCHHHHHHHHHhhccC
Confidence            34434 47788888888664   223656655322    2233333332   24666666666788999999998765  


Q ss_pred             CCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           93 GSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        93 ~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      .+.++++++|.. +++..+.++++.+.+.+.++++.
T Consensus        90 ~~~vli~~~D~p~~~~~~i~~l~~~~~~~~~~~~~~  125 (229)
T cd02540          90 EGDVLVLYGDVPLITPETLQRLLEAHREAGADVTVL  125 (229)
T ss_pred             CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEE
Confidence            689999999984 78889999998887655665543

The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.

>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]

Probab=96.80  E-value=0.025  Score=44.89  Aligned_cols=129  Identities=19%  Similarity=0.195  Sum_probs=84.4

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhC--------CCcEEEeeCCCC
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYG--------EDRILLRPRPKK   77 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~--------~~~~~~~~~~~~   77 (242)
                      .++.+.|++-+.|+++.+..+++.|..+... ..+.|||--||+...+.+.++.+.+...        ...+.+...+..
T Consensus        65 ~~~v~pvvVf~csR~~~lr~~v~kll~yrPsaekfpiiVSQD~~~e~vk~~~~~~g~~v~~i~~~~h~~~ei~v~~~~~k  144 (411)
T KOG1413|consen   65 WPPVIPVVVFACSRADALRRHVKKLLEYRPSAEKFPIIVSQDCEKEAVKKKLLSYGSDVSHIQHPMHLKDEISVPPRHKK  144 (411)
T ss_pred             CCCceeEEEEecCcHHHHHHHHHHHHHhCcchhhcCEEEeccCCcHHHHHHHHHhccchhhhcCccccccccccCCcccc
Confidence            3567888888999999999999999988633 4677888888888888888877744321        012222222222


Q ss_pred             cc--------hHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHH--HHhcCCcEEEEEEEeecCC
Q 026146           78 LG--------LGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKK--QLETGASIVTGTRYVRSGG  135 (242)
Q Consensus        78 ~g--------~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~--~~~~~~~~v~~~~~~~~~~  135 (242)
                      ..        +.-|+|..+.....+++++..+|..+.|+|+.=+...  +.+.+..+-+.+.+..+++
T Consensus       145 ~~~Yy~IarHYkwAL~q~F~~~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~siwcvsaWNDNGk  212 (411)
T KOG1413|consen  145 FNAYYKIARHYKWALNQLFIVFRESRVIITEDDLNIAPDFFSYFRNTIILLKGDPSIWCVSAWNDNGK  212 (411)
T ss_pred             cchhHHHHHHHHHHHhhHHhhcCCceeEEecchhhhhhHHHHHHHHHHHHHhcCCceEEeeeeccCCC
Confidence            11        2334444444456899999999999999987766542  3344555555555655543

>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch

Probab=96.72  E-value=0.11  Score=38.67  Aligned_cols=156  Identities=13%  Similarity=0.145  Sum_probs=91.3

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC----CCcEEEee------CCCCcchHHH
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG----EDRILLRP------RPKKLGLGTA   83 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~----~~~~~~~~------~~~~~g~~~a   83 (242)
                      .+|..+....+..+++.+.+.   .--+++||-+...+...+.+.+.. .++    ...+.++.      .+...|-+.|
T Consensus        23 llpv~g~~pli~~~l~~l~~~---gi~~iivv~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gta~a   98 (200)
T cd02508          23 AVPFGGRYRLIDFPLSNMVNS---GIRNVGVLTQYKSRSLNDHLGSGK-EWDLDRKNGGLFILPPQQRKGGDWYRGTADA   98 (200)
T ss_pred             eeEECCeeeeHHHHHHHHHHC---CCCEEEEEeCCChHHHHHHHhCCC-cccCCCCCCCEEEeCcccCCCCCcccCcHHH
Confidence            566666546888899988764   233677776644332222222100 000    01244443      2345788999


Q ss_pred             HHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCC
Q 026146           84 YIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWP  160 (242)
Q Consensus        84 ~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (242)
                      ...|.....   .+.++++.+|.+ .+.-+..+++.+.+.+.++.....                               
T Consensus        99 l~~a~~~i~~~~~~~~lv~~gD~v-~~~~~~~~l~~~~~~~~~~t~~~~-------------------------------  146 (200)
T cd02508          99 IYQNLDYIERSDPEYVLILSGDHI-YNMDYREMLDFHIESGADITVVYK-------------------------------  146 (200)
T ss_pred             HHHHHHHHHhCCCCEEEEecCCEE-EecCHHHHHHHHHHcCCCEEEEEh-------------------------------
Confidence            988888753   578899999985 455688888877766666554332                               


Q ss_pred             CccccccchhhcchHHHHHhhhc-ccCCCcccchHHHHHHHHcCCceEEee
Q 026146          161 GVSDLTGSFRLYKKSVLEDVISS-CVSKGYVFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       161 ~~~~~~g~~~~~rr~~~~~~~~~-~~~~~~~~d~~~~~~~~~~g~~i~~~p  210 (242)
                          ..++.++++++++.++... ..........++...+.+. .++...+
T Consensus       147 ----~~~g~yi~~~~~~~~~l~~~~~~~~~~~~~d~i~~l~~~-~~v~~~~  192 (200)
T cd02508         147 ----ASMGIYIFSKDLLIELLEEDAADGSHDFGKDIIPAMLKK-LKIYAYE  192 (200)
T ss_pred             ----hcCEEEEEEHHHHHHHHHHHhccCcchhHHHHHHHHhcc-CcEEEEE
Confidence                4466678998888665221 1111222334666666666 4555443

ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.

>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]

Probab=96.72  E-value=0.036  Score=42.65  Aligned_cols=188  Identities=16%  Similarity=0.129  Sum_probs=107.9

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      ++|+|+. +.+.-+++.|...   .--+|+||-.--+   ....+++...  .-+.++++...++..|.+.|.-.|-++.
T Consensus        25 LlpV~~K-Pmi~y~l~~L~~a---GI~dI~II~~~~~---~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~~a~~fv   97 (286)
T COG1209          25 LLPVYDK-PMIYYPLETLMLA---GIRDILIVVGPED---KPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVLIAEDFV   97 (286)
T ss_pred             cceecCc-chhHhHHHHHHHc---CCceEEEEecCCc---hhhhhhhhcCccccCcceEEEecCCCCcHHHHHHHHHhhc
Confidence            5678885 5677788888655   2336666644322   2223333222  1135899999999999999999999999


Q ss_pred             C-CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchh
Q 026146           92 S-GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR  170 (242)
Q Consensus        92 ~-~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  170 (242)
                      . .+++++| +|.++.. -++++++.+.+.+.++.+.-....++...+-.-...-. +.....-+ -..+.-.....+..
T Consensus        98 ~~~~f~l~L-GDNi~~~-~l~~~~~~~~~~~~ga~i~~~~V~dP~rfGV~e~d~~~-~v~~l~EK-P~~P~SNlAvtGlY  173 (286)
T COG1209          98 GDDDFVLYL-GDNIFQD-GLSELLEHFAEEGSGATILLYEVDDPSRYGVVEFDEDG-KVIGLEEK-PKEPKSNLAVTGLY  173 (286)
T ss_pred             CCCceEEEe-cCceecc-ChHHHHHHHhccCCCcEEEEEEcCCcccceEEEEcCCC-cEEEeEEC-CCCCCCceeEEEEE
Confidence            8 5555555 5555554 78888887776555554433333333211111111000 00000000 01111223345667


Q ss_pred             hcchHHHHHhhhc-ccCCCcccchHHHHHHHHcCCceEEeeee
Q 026146          171 LYKKSVLEDVISS-CVSKGYVFQMEMIVRACRKGYHIEEVPIT  212 (242)
Q Consensus       171 ~~rr~~~~~~~~~-~~~~~~~~d~~~~~~~~~~g~~i~~~p~~  212 (242)
                      +++.++++.+-.- +...+-.|=++........|.++......
T Consensus       174 ~~d~~Vf~~~~~ikPS~RGElEITd~i~~~i~~G~~~~~~~~~  216 (286)
T COG1209         174 FYDPSVFEAIKQIKPSARGELEITDAIDLYIEKGYLVVAILIR  216 (286)
T ss_pred             EeChHHHHHHHcCCCCCCCceEehHHHHHHHHcCcEEEEEEcc
Confidence            8999999987322 33344445567777888999998888754

>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2

Probab=96.69  E-value=0.043  Score=44.12  Aligned_cols=51  Identities=12%  Similarity=0.138  Sum_probs=37.3

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHH
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVK   58 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~   58 (242)
                      .+.+.|||-++|+.++|+.+|+||.+...-...-+|+--|.-.++.-++++
T Consensus        30 ~~~~vivvqVH~r~~yl~~li~sL~~~~~I~~~llifSHd~~~~ein~~v~   80 (356)
T PF05060_consen   30 NDSIVIVVQVHNRPEYLKLLIDSLSQARGIEEALLIFSHDFYSEEINDLVQ   80 (356)
T ss_pred             CCCEEEEEEECCcHHHHHHHHHHHHHhhCccceEEEEeccCChHHHHHHHH
Confidence            467889999999999999999999877443555566656665555444444

4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane

>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function

Probab=96.68  E-value=0.015  Score=42.48  Aligned_cols=99  Identities=20%  Similarity=0.192  Sum_probs=64.6

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhcC--CCE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHAS--GSF   95 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a~--~d~   95 (242)
                      +....++.+++.+.+.   ..-+++|+-+....   . ..+....   ..+.++..+ ...|...+...|++.+.  .++
T Consensus        24 ~g~~li~~~i~~l~~~---~~~~i~vv~~~~~~---~-~~~~~~~---~~~~~~~~~~~~~G~~~~i~~al~~~~~~~~~   93 (186)
T cd04182          24 DGKPLLRHALDAALAA---GLSRVIVVLGAEAD---A-VRAALAG---LPVVVVINPDWEEGMSSSLAAGLEALPADADA   93 (186)
T ss_pred             CCeeHHHHHHHHHHhC---CCCcEEEECCCcHH---H-HHHHhcC---CCeEEEeCCChhhCHHHHHHHHHHhccccCCE
Confidence            4556788888888654   12257776543221   1 1222111   134444433 33588899999999886  799


Q ss_pred             EEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           96 VVIMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        96 i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ++++.+|.. ++++.+..+++.+.+.+.++++.
T Consensus        94 vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~  126 (186)
T cd04182          94 VLILLADQPLVTAETLRALIDAFREDGAGIVAP  126 (186)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEE
Confidence            999999985 78999999998876555555554

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function

Probab=96.67  E-value=0.027  Score=44.34  Aligned_cols=105  Identities=18%  Similarity=0.193  Sum_probs=70.9

Q ss_pred             cEEEEE-eCcc-ccc--cHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC----------
Q 026146           10 KYSIII-PTYN-ERL--NIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP----------   75 (242)
Q Consensus        10 ~isiii-p~~n-~~~--~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~----------   75 (242)
                      .++|++ |.|. +.+  .+.+.|+....+   ..-.+++-++++++.+.++|+.+.+..   .+.++.-+          
T Consensus         2 ~~~vCv~pl~~~~~~~~~l~e~ie~~~~~---G~~~~~~Y~~~~~~~~~~vL~~Y~~~g---~v~~~~w~~~~~~~~~~~   75 (285)
T PF01697_consen    2 DFVVCVSPLFGNEDDWLQLIEWIEYHRLL---GVDHFYFYDNSSSPSVRKVLKEYERSG---YVEVIPWPLRPKFPDFPS   75 (285)
T ss_pred             cEEEEccchhcccccHHHHHHHHHHHHHh---CCCEEEEEEccCCHHHHHhHHHHhhcC---eEEEEEcccccccCCccc
Confidence            466666 5565 333  667777766555   334678888889999999999887652   45555543          


Q ss_pred             ----C-----CcchHHHHHHHHhhcC--CCEEEEEeCCCCCCCC----ChHHHHHHHHhc
Q 026146           76 ----K-----KLGLGTAYIHGLKHAS--GSFVVIMDADLSHHPK----YLPSFIKKQLET  120 (242)
Q Consensus        76 ----~-----~~g~~~a~n~g~~~a~--~d~i~~lD~D~~~~~~----~l~~l~~~~~~~  120 (242)
                          .     ..|...|.|.++...+  .+|++|+|-|.++-|.    +.+.+...+++.
T Consensus        76 ~~~~~~~~~~~~~q~~a~~DCl~r~~~~~~~v~f~DiDE~lvP~~~~~~~~~~~~~l~~~  135 (285)
T PF01697_consen   76 PFPDPNSSVERRGQIAAYNDCLLRYRYRAKWVAFIDIDEFLVPTNAPTYPEEFEDLLREF  135 (285)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHHhhhhceEEEEeccccEEEeccccchhhHHHHHHhhc
Confidence                1     1245778888888775  6999999999984433    366666666553

The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.

>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars

Probab=96.65  E-value=0.063  Score=40.29  Aligned_cols=106  Identities=15%  Similarity=0.100  Sum_probs=67.2

Q ss_pred             eCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCE
Q 026146           16 PTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSF   95 (242)
Q Consensus        16 p~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~   95 (242)
                      |.-+ ...+..+++++...-   --+++|+-+...+...+.+.+...  .+..+.++..+...|.+.++..+++....++
T Consensus        25 ~v~g-~pli~~~l~~l~~~g---~~~i~vv~~~~~~~i~~~~~~~~~--~~~~i~~~~~~~~~g~~~al~~~~~~~~~~~   98 (217)
T cd04181          25 PIAG-KPILEYIIERLARAG---IDEIILVVGYLGEQIEEYFGDGSK--FGVNIEYVVQEEPLGTAGAVRNAEDFLGDDD   98 (217)
T ss_pred             EECC-eeHHHHHHHHHHHCC---CCEEEEEeccCHHHHHHHHcChhh--cCceEEEEeCCCCCccHHHHHHhhhhcCCCC
Confidence            3344 477888899887652   236666665432222222221100  1235666666656788999999998887889


Q ss_pred             EEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEE
Q 026146           96 VVIMDADLSHHPKYLPSFIKKQLETGASIVTGT  128 (242)
Q Consensus        96 i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~  128 (242)
                      ++++++|...+.+ +.+++....+.+.++++..
T Consensus        99 ~lv~~~D~~~~~~-~~~~~~~~~~~~~~~~~~~  130 (217)
T cd04181          99 FLVVNGDVLTDLD-LSELLRFHREKGADATIAV  130 (217)
T ss_pred             EEEEECCeecCcC-HHHHHHHHHhcCCCEEEEE
Confidence            9999999987666 5566666666666665543

Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.

>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans

Probab=96.55  E-value=0.0022  Score=49.33  Aligned_cols=108  Identities=11%  Similarity=0.032  Sum_probs=65.5

Q ss_pred             EEEEEeC-ccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHh
Q 026146           11 YSIIIPT-YNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLK   89 (242)
Q Consensus        11 isiiip~-~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~   89 (242)
                      +||+|.+ |++.+.|.+.++.+.+. . .--+|+||=++.......  ......  ...++++..+.|  .-.++-.-..
T Consensus         1 fTvvi~t~~~R~~~L~~~l~~l~~~-~-~l~~IvVvWn~~~~~P~~--~~~~~~--~vpV~~~~~~~n--sLnnRF~p~~   72 (247)
T PF09258_consen    1 FTVVINTSYKRSDLLKRLLRHLASS-P-SLRKIVVVWNNPNPPPPS--SKWPST--GVPVRVVRSSRN--SLNNRFLPDP   72 (247)
T ss_dssp             EEEEEEE-SS-HHHHHHHHHHHTTS-T-TEEEEEEEEE-TS--THH--HHHT-----S-EEEEEESSH--HGGGGGS--T
T ss_pred             CEEEEEecccchHHHHHHHHHHHcC-C-CCCeEEEEeCCCCCCCcc--cccCCC--CceEEEEecCCc--cHHhcCcCcc
Confidence            5889999 99999999999999544 2 234677775553222111  111111  246888875543  2223334445


Q ss_pred             hcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           90 HASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        90 ~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      ..+++.|+.+|+|..++.+.|+-..+..++.+..+|+
T Consensus        73 ~i~T~AVl~~DDDv~~~~~~l~faF~~W~~~pdrlVG  109 (247)
T PF09258_consen   73 EIETDAVLSLDDDVMLSCDELEFAFQVWREFPDRLVG  109 (247)
T ss_dssp             T--SSEEEEEETTEEE-HHHHHHHHHHHCCSTTSEEE
T ss_pred             ccCcceEEEecCCcccCHHHHHHHHHHHHhChhheeC
Confidence            6679999999999999999999988888766555554

They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=96.47  E-value=0.042  Score=48.07  Aligned_cols=104  Identities=16%  Similarity=0.260  Sum_probs=65.8

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCC------hHHHHHHHHHHhCCCcEEEeeCC-------
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDG------TQEVVKQLQQLYGEDRILLRPRP-------   75 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~------t~~~l~~~~~~~~~~~~~~~~~~-------   75 (242)
                      ...+||||+.|+.-   .+|+.+++... .+.-||||.|++...      ..+.+++++.... ..+.+++.+       
T Consensus        55 ~~~aivvp~k~e~~---~~~~gvl~~ip-~~c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~~-~~~~~vhq~dp~~a~a  129 (694)
T PRK14502         55 KKMAIVLPIKDEDL---KVFEGVLSGIP-HDCLMIVISNSSKQEVDNFKNEKDIVNRFCRITH-RQAIVVHQKNPELANA  129 (694)
T ss_pred             hCcEEEEEcCCCch---hHHhhHhhcCC-CCCeEEEEeCCCCCchHHHHHHHHHHHHHHHhhc-CceEEEEcCCHHHHHH
Confidence            35899999999763   24555555533 466899999987632      3345555554321 234444322       


Q ss_pred             ---------------CCcchHHHHHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHH
Q 026146           76 ---------------KKLGLGTAYIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQL  118 (242)
Q Consensus        76 ---------------~~~g~~~a~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~  118 (242)
                                     -+-|++.++-.|+-.|+   .+||-|+|+|..++ +.+.+..+.+.
T Consensus       130 ~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~p-g~v~ey~~~ya  189 (694)
T PRK14502        130 IADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIP-GAVWEYAKHFA  189 (694)
T ss_pred             HHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCC-chHHHHHHHHH
Confidence                           12367777778877765   59999999997764 55666565543

>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase

Probab=96.33  E-value=0.14  Score=39.23  Aligned_cols=180  Identities=13%  Similarity=0.040  Sum_probs=89.8

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee-CCCCcchHHHHHHHHhh---cCCC
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP-RPKKLGLGTAYIHGLKH---ASGS   94 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~-~~~~~g~~~a~n~g~~~---a~~d   94 (242)
                      +....+..+++.+.+.   .--+|+|+-+.      +.+.+..+.++   +.++. .+...|.......+++.   ...+
T Consensus        22 ~GkPli~~~le~~~~~---~~d~VvVvt~~------~~i~~~~~~~g---~~~v~~~~~~~~Gt~r~~~~~~~l~~~~~d   89 (238)
T TIGR00466        22 FGKPMIVHVAENANES---GADRCIVATDD------ESVAQTCQKFG---IEVCMTSKHHNSGTERLAEVVEKLALKDDE   89 (238)
T ss_pred             CCcCHHHHHHHHHHhC---CCCeEEEEeCH------HHHHHHHHHcC---CEEEEeCCCCCChhHHHHHHHHHhCCCCCC
Confidence            3456777788887543   12366666442      11333333332   33332 22222322233333332   2568


Q ss_pred             EEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeec-CC------------ccCc--hhhHHHHHhHHHHHHHHHh
Q 026146           95 FVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRS-GG------------VHGW--NLMRKLTSRGANVLAQTLL  158 (242)
Q Consensus        95 ~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~-~~------------~~~~--~~~~~~~~~~~~~~~~~~~  158 (242)
                      +++++|+|.- ++++.++.+++.+.+.+.++++......+ ..            ..+.  .+.+...............
T Consensus        90 ~Vli~~gD~Pli~~~~I~~li~~~~~~~~~~a~~~~~~~d~~~~~~p~~vk~v~~~~g~alyfsr~~ip~~R~~~~~~~t  169 (238)
T TIGR00466        90 RIVNLQGDEPFIPKEIIRQVADNLATKNVPMAALAVKIHDAEEAFNPNAVKVVLDSQGYALYFSRSLIPFDRDFFAKRQT  169 (238)
T ss_pred             EEEEEcCCcCcCCHHHHHHHHHHHhcCCCCEEEEeeecCCHHHccCCCceEEEeCCCCeEEEecCCCCCCCCCccccccc
Confidence            9999999988 89999999999886555666554322211 00            0000  0000000000000000000


Q ss_pred             CCC-ccccccchhhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEeee
Q 026146          159 WPG-VSDLTGSFRLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       159 ~~~-~~~~~g~~~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      ... ...-.-|.++||++++++.-.... ...-.|..| .+|+...|++|..+..
T Consensus       170 pq~~~~~~h~Giy~~~~~~L~~~~~~~~~~le~~e~le-qlr~le~g~~i~~~~~  223 (238)
T TIGR00466       170 PVGDNLLRHIGIYGYRAGFIEEYVAWKPCVLEEIEKLE-QLRVLYYGEKIHVKIA  223 (238)
T ss_pred             ccccceeEEEEEEeCCHHHHHHHHhCCCCcccccchhH-HHhhhhcCCceEEEEe
Confidence            010 122245667899999999744322 222233433 4788999999988764

>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional

Probab=96.32  E-value=0.032  Score=42.95  Aligned_cols=96  Identities=13%  Similarity=0.131  Sum_probs=54.3

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---CCCEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---SGSFVV   97 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---~~d~i~   97 (242)
                      ...+..+++.+.+.   ..-+|+|+.+.  +.    +.++...++ ..+.+...+...|.+.... ++...   ..+.++
T Consensus        27 kpll~~~l~~l~~~---~i~~ivvv~~~--~~----i~~~~~~~~-~~v~~~~~~~~~gt~~~~~-~~~~~~~~~~~~vl   95 (245)
T PRK05450         27 KPMIVRVYERASKA---GADRVVVATDD--ER----IADAVEAFG-GEVVMTSPDHPSGTDRIAE-AAAKLGLADDDIVV   95 (245)
T ss_pred             cCHHHHHHHHHHhc---CCCeEEEECCc--HH----HHHHHHHcC-CEEEECCCcCCCchHHHHH-HHHhcCCCCCCEEE
Confidence            45566777777654   12366665531  22    233333322 2343333333334433332 33322   468899


Q ss_pred             EEeCCC-CCCCCChHHHHHHHHhcCCcEEEE
Q 026146           98 IMDADL-SHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        98 ~lD~D~-~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ++++|. .++++.+.++++.+.+++.++++.
T Consensus        96 v~~~D~Pli~~~~l~~li~~~~~~~~~~~~~  126 (245)
T PRK05450         96 NVQGDEPLIPPEIIDQVAEPLANPEADMATL  126 (245)
T ss_pred             EecCCCCCCCHHHHHHHHHHHhcCCCCeEee
Confidence            999998 589999999999886655565554

>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family

Probab=96.26  E-value=0.081  Score=38.77  Aligned_cols=100  Identities=17%  Similarity=0.177  Sum_probs=64.6

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHHHHHHh-hcCCCEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAYIHGLK-HASGSFV   96 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~n~g~~-~a~~d~i   96 (242)
                      +....+...++.+.+..   .-+++||-+...   .+..+.+...   ..+.++.... ..|...+...|++ ....+++
T Consensus        23 ~g~pll~~~i~~l~~~~---~~~iivv~~~~~---~~~~~~~~~~---~~v~~v~~~~~~~g~~~si~~~l~~~~~~~~v   93 (188)
T TIGR03310        23 KGKTILEHVVDNALRLF---FDEVILVLGHEA---DELVALLANH---SNITLVHNPQYAEGQSSSIKLGLELPVQSDGY   93 (188)
T ss_pred             CCeeHHHHHHHHHHHcC---CCcEEEEeCCcH---HHHHHHhccC---CCeEEEECcChhcCHHHHHHHHhcCCCCCCEE
Confidence            44677788888876542   225666644322   2233333221   2356555432 2578888888888 4567999


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      +++++|.. ++++.++.+++.+.+.+.++++.
T Consensus        94 lv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~  125 (188)
T TIGR03310        94 LFLLGDQPFVTPDIIQLLLEAFALKNDEIVVP  125 (188)
T ss_pred             EEEeCCcCCCCHHHHHHHHHHHHhCCCcEEEe
Confidence            99999985 78999999998876655555554

Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.

>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family

Probab=96.23  E-value=0.1  Score=39.37  Aligned_cols=106  Identities=12%  Similarity=0.086  Sum_probs=64.0

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhcC
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a~   92 (242)
                      .+|.-++ ..+...++++.+.-   --+|+|+-+...+...+.+.+   ...+..+.+.... ...|.+.+...++....
T Consensus        24 llpi~g~-~li~~~l~~l~~~g---i~~i~iv~~~~~~~i~~~~~~---~~~~~~i~~~~~~~~~~g~~~~l~~~~~~~~   96 (221)
T cd06422          24 LVPVAGK-PLIDHALDRLAAAG---IRRIVVNTHHLADQIEAHLGD---SRFGLRITISDEPDELLETGGGIKKALPLLG   96 (221)
T ss_pred             eeeECCE-EHHHHHHHHHHHCC---CCEEEEEccCCHHHHHHHHhc---ccCCceEEEecCCCcccccHHHHHHHHHhcC
Confidence            3444454 78888999887652   225666654332222222222   1122345555544 45688899999999876


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHH--hcCCcEEEE
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQL--ETGASIVTG  127 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~--~~~~~~v~~  127 (242)
                      .+.++++.+|...+.++.. +++...  +.+..+.+.
T Consensus        97 ~~~~lv~~~D~i~~~~~~~-~~~~~~~~~~~~~~~~~  132 (221)
T cd06422          97 DEPFLVVNGDILWDGDLAP-LLLLHAWRMDALLLLLP  132 (221)
T ss_pred             CCCEEEEeCCeeeCCCHHH-HHHHHHhccCCCceEEE
Confidence            6889999999988776544 555544  334444443

This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.

>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed

Probab=96.23  E-value=0.062  Score=39.72  Aligned_cols=93  Identities=15%  Similarity=0.191  Sum_probs=59.6

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--CCcchHHHHHHHHhhcCCCEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--KKLGLGTAYIHGLKHASGSFV   96 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--~~~g~~~a~n~g~~~a~~d~i   96 (242)
                      +....+..+++.+...    --+|+|+-+..    .+.+.+.       .+.++...  ...|...+...|++....+++
T Consensus        28 ~g~~ll~~~i~~l~~~----~~~i~vv~~~~----~~~~~~~-------~~~~v~~~~~~~~g~~~~i~~~l~~~~~~~v   92 (193)
T PRK00317         28 NGKPLIQHVIERLAPQ----VDEIVINANRN----LARYAAF-------GLPVIPDSLADFPGPLAGILAGLKQARTEWV   92 (193)
T ss_pred             CCEEHHHHHHHHHhhh----CCEEEEECCCC----hHHHHhc-------CCcEEeCCCCCCCCCHHHHHHHHHhcCCCeE
Confidence            3445667777777521    22677764421    1112211       23344432  236778889999998888999


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      +++++|.. ++++.++.+++.+.+.+..++.
T Consensus        93 lv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~  123 (193)
T PRK00317         93 LVVPCDTPFIPPDLVARLAQAAGKDDADVAW  123 (193)
T ss_pred             EEEcCCcCCCCHHHHHHHHHhhhcCCCcEEE
Confidence            99999986 7999999999987654444443

>PLN02400 cellulose synthase

Probab=96.21  E-value=0.0064  Score=55.21  Aligned_cols=53  Identities=19%  Similarity=0.286  Sum_probs=43.2

Q ss_pred             cEEEeeCCCCcc-----hHHHHHHHHhhc----CCCEEEEEeCCCCC-CCCChHHHHHHHHhc
Q 026146           68 RILLRPRPKKLG-----LGTAYIHGLKHA----SGSFVVIMDADLSH-HPKYLPSFIKKQLET  120 (242)
Q Consensus        68 ~~~~~~~~~~~g-----~~~a~n~g~~~a----~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~  120 (242)
                      .+.|+.++++.|     |++|+|..++-+    .++||+-+|.|-.. ++..+...+-.+.+.
T Consensus       524 ~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~  586 (1085)
T PLN02400        524 RLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDP  586 (1085)
T ss_pred             eeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheecc
Confidence            567777776666     899999999854    69999999999886 688899988887653

>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins

Probab=96.10  E-value=0.098  Score=39.92  Aligned_cols=107  Identities=14%  Similarity=0.086  Sum_probs=64.4

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCC-
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASG-   93 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~-   93 (242)
                      +|..+. ..+..+++++..+-   --+++|+-....+...+.+.++... .+..+.+.......|.+.++..+...... 
T Consensus        26 lpv~g~-pli~~~l~~l~~~g---~~~v~iv~~~~~~~~~~~l~~~~~~-~~~~i~~~~~~~~~G~~~al~~a~~~~~~~  100 (233)
T cd06425          26 VEFCNK-PMIEHQIEALAKAG---VKEIILAVNYRPEDMVPFLKEYEKK-LGIKITFSIETEPLGTAGPLALARDLLGDD  100 (233)
T ss_pred             CeECCc-chHHHHHHHHHHCC---CcEEEEEeeeCHHHHHHHHhccccc-CCeEEEeccCCCCCccHHHHHHHHHHhccC
Confidence            344454 77888999887652   2256666553333333333332111 12234443344557888899888887653 


Q ss_pred             -CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146           94 -SFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        94 -d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                       +-++++++|...+.+ +..+++..++.+.++.+.
T Consensus       101 ~~~~lv~~~D~~~~~~-~~~~~~~~~~~~~~~~~~  134 (233)
T cd06425         101 DEPFFVLNSDVICDFP-LAELLDFHKKHGAEGTIL  134 (233)
T ss_pred             CCCEEEEeCCEeeCCC-HHHHHHHHHHcCCCEEEE
Confidence             446777999887655 588888877766665544

GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.

>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB

Probab=96.09  E-value=0.11  Score=38.34  Aligned_cols=102  Identities=17%  Similarity=0.095  Sum_probs=63.3

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhc---CCC
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHA---SGS   94 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a---~~d   94 (242)
                      +....+..+++.+.+.   .--+++||-+... +....+.+....  ...+.++..+ ...|...+.-.|++.+   ..+
T Consensus        24 ~g~~ll~~~i~~~~~~---~~~~i~vv~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~G~~~si~~gl~~~~~~~~d   97 (190)
T TIGR03202        24 GETTLGSASLKTALSS---RLSKVIVVIGEKY-AHLSWLDPYLLA--DERIMLVCCRDACEGQAHSLKCGLRKAEAMGAD   97 (190)
T ss_pred             CCccHHHHHHHHHHhC---CCCcEEEEeCCcc-chhhhhhHhhhc--CCCeEEEECCChhhhHHHHHHHHHHHhccCCCC
Confidence            4566677777665432   2236777765432 222222222111  1234444332 2357888999999876   479


Q ss_pred             EEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146           95 FVVIMDADLS-HHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        95 ~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      +++++++|.- ++++.++.+++.+.+.+.+++.
T Consensus        98 ~vlv~~~D~P~v~~~~i~~L~~~~~~~~~~~~~  130 (190)
T TIGR03202        98 AVVILLADQPFLTADVINALLALAKRRPDDYVA  130 (190)
T ss_pred             eEEEEeCCCCCCCHHHHHHHHHHHhhCCCCEEE
Confidence            9999999988 8899999999987654555544

In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.

>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide

Probab=96.00  E-value=0.066  Score=39.03  Aligned_cols=93  Identities=14%  Similarity=0.219  Sum_probs=64.4

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhcCCCEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHASGSFVV   97 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a~~d~i~   97 (242)
                      +....+..+++.+.+. .   -+|+|+-+.....    ...       ..+.++... ...|...+...|++....++++
T Consensus        24 ~g~~ll~~~i~~l~~~-~---~~iivv~~~~~~~----~~~-------~~~~~v~~~~~~~G~~~si~~~l~~~~~~~vl   88 (181)
T cd02503          24 GGKPLLEHVLERLKPL-V---DEVVISANRDQER----YAL-------LGVPVIPDEPPGKGPLAGILAALRAAPADWVL   88 (181)
T ss_pred             CCEEHHHHHHHHHHhh-c---CEEEEECCCChHH----Hhh-------cCCcEeeCCCCCCCCHHHHHHHHHhcCCCeEE
Confidence            4567788888888654 1   2677775533221    111       134555543 3568899999999998899999


Q ss_pred             EEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           98 IMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        98 ~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ++.+|.. ++++.+..+++.+ .++.++++.
T Consensus        89 v~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~  118 (181)
T cd02503          89 VLACDMPFLPPELLERLLAAA-EEGADAVVP  118 (181)
T ss_pred             EEeCCcCCCCHHHHHHHHHhh-ccCCCEEEE
Confidence            9999986 7899999999887 445555553

The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.

>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases

Probab=96.00  E-value=0.17  Score=38.08  Aligned_cols=174  Identities=14%  Similarity=0.210  Sum_probs=94.5

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHh-CCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY-GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIM   99 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~-~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~l   99 (242)
                      ...+...++.+.+.-   --+|+|+-+-..+...+.+.   ... .+..+.+.......|.+.+.-.|++....+.++++
T Consensus        29 ~pli~~~l~~l~~~g---~~~v~vv~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~G~~~~l~~a~~~~~~~~~lv~  102 (223)
T cd06915          29 RPFLEYLLEYLARQG---ISRIVLSVGYLAEQIEEYFG---DGYRGGIRIYYVIEPEPLGTGGAIKNALPKLPEDQFLVL  102 (223)
T ss_pred             cchHHHHHHHHHHCC---CCEEEEEcccCHHHHHHHHc---CccccCceEEEEECCCCCcchHHHHHHHhhcCCCCEEEE
Confidence            477888888887641   22566665432222222222   111 12234455555667888899999988877889999


Q ss_pred             eCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCC---CccccccchhhcchHH
Q 026146          100 DADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWP---GVSDLTGSFRLYKKSV  176 (242)
Q Consensus       100 D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~rr~~  176 (242)
                      .+|..++. .+..+++.+.+.+.+++..........  .+.... . ... +.+......+   ......+|..+++++.
T Consensus       103 ~~D~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~v~-~-d~~-~~v~~~~ek~~~~~~~~~~~Giy~~~~~~  176 (223)
T cd06915         103 NGDTYFDV-DLLALLAALRASGADATMALRRVPDAS--RYGNVT-V-DGD-GRVIAFVEKGPGAAPGLINGGVYLLRKEI  176 (223)
T ss_pred             ECCcccCC-CHHHHHHHHHhCCCcEEEEEEECCCCC--cceeEE-E-CCC-CeEEEEEeCCCCCCCCcEEEEEEEECHHH
Confidence            99987754 577888877666666655432221111  111000 0 000 0000000001   1224457788999999


Q ss_pred             HHHhhhcccCCCcccchHHHHHHHHcCCceEEeee
Q 026146          177 LEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       177 ~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      ++.+...    .+....++..++...| ++...+.
T Consensus       177 l~~~~~~----~~~~~~~~~~~l~~~~-~v~~~~~  206 (223)
T cd06915         177 LAEIPAD----AFSLEADVLPALVKRG-RLYGFEV  206 (223)
T ss_pred             HhhCCcc----CCChHHHHHHHHHhcC-cEEEEec
Confidence            9876321    1212235666677677 7766553

WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.

>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase

Probab=95.90  E-value=0.13  Score=39.96  Aligned_cols=109  Identities=17%  Similarity=0.050  Sum_probs=67.4

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc--
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA--   91 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a--   91 (242)
                      .+|.-++ ..|...|+++.+..  .--+|+|+-....+...+.+.+.... .+..+.++......|.+.|...+....  
T Consensus        25 llpv~g~-plI~~~l~~l~~~~--gi~~i~iv~~~~~~~i~~~l~~~~~~-~~~~i~~~~~~~~~Gt~~al~~a~~~l~~  100 (257)
T cd06428          25 LFPVAGK-PMIHHHIEACAKVP--DLKEVLLIGFYPESVFSDFISDAQQE-FNVPIRYLQEYKPLGTAGGLYHFRDQILA  100 (257)
T ss_pred             cCeECCe-eHHHHHHHHHHhcC--CCcEEEEEecCCHHHHHHHHHhcccc-cCceEEEecCCccCCcHHHHHHHHHHhhc
Confidence            4555565 88888999887631  12266666554333333333322111 123466655556678888887777654  


Q ss_pred             -CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146           92 -SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        92 -~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                       ..++++++.+|...+. -+..+++...+.+.++.+.
T Consensus       101 ~~~~~~lv~~gD~~~~~-dl~~~~~~h~~~~~~~tl~  136 (257)
T cd06428         101 GNPSAFFVLNADVCCDF-PLQELLEFHKKHGASGTIL  136 (257)
T ss_pred             cCCCCEEEEcCCeecCC-CHHHHHHHHHHcCCCEEEE
Confidence             2578899999988655 4888888877766665443

N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre

>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]

Probab=95.90  E-value=0.016  Score=43.54  Aligned_cols=90  Identities=17%  Similarity=0.188  Sum_probs=66.7

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC--CcchHHHHHHHHhhcCCCEEE
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK--KLGLGTAYIHGLKHASGSFVV   97 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~--~~g~~~a~n~g~~~a~~d~i~   97 (242)
                      ..+.|...+++|.+.   ..-|++||-+|=.   .+.++.+.++++. ..+++.++.  ..+-+.++-.|.+..+++ ++
T Consensus        30 gr~ii~~~i~~L~~~---gi~e~vvV~~g~~---~~lve~~l~~~~~-~~~iv~N~~y~ktN~~~Sl~~akd~~~~~-fi  101 (239)
T COG1213          30 GREIIYRTIENLAKA---GITEFVVVTNGYR---ADLVEEFLKKYPF-NAKIVINSDYEKTNTGYSLLLAKDYMDGR-FI  101 (239)
T ss_pred             CeEeHHHHHHHHHHc---CCceEEEEeccch---HHHHHHHHhcCCc-ceEEEeCCCcccCCceeEEeeehhhhcCc-EE
Confidence            346778889988766   4558999987743   5567777777763 566666542  223366788888888888 88


Q ss_pred             EEeCCCCCCCCChHHHHHHH
Q 026146           98 IMDADLSHHPKYLPSFIKKQ  117 (242)
Q Consensus        98 ~lD~D~~~~~~~l~~l~~~~  117 (242)
                      ++++|.+++|.+++.++++-
T Consensus       102 i~~sD~vye~~~~e~l~~a~  121 (239)
T COG1213         102 LVMSDHVYEPSILERLLEAP  121 (239)
T ss_pred             EEeCCEeecHHHHHHHHhCc
Confidence            89999999999999999863

>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional

Probab=95.67  E-value=0.36  Score=38.29  Aligned_cols=105  Identities=15%  Similarity=0.227  Sum_probs=66.9

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      .+|.++. +.|...|+.+...   .--+|++|-....   .+.++++...  .-+.++.+...+...|.+.|...|....
T Consensus        28 Llpv~gk-PmI~~~l~~l~~a---Gi~~I~ii~~~~~---~~~~~~~l~~g~~~g~~i~y~~q~~~~Gta~Al~~a~~~i  100 (292)
T PRK15480         28 LLPIYDK-PMIYYPLSTLMLA---GIRDILIISTPQD---TPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFI  100 (292)
T ss_pred             EeEECCE-EHHHHHHHHHHHC---CCCEEEEEecCCc---hHHHHHHHcCccccCceeEEEECCCCCCHHHHHHHHHHHh
Confidence            6777886 7888888888765   2236776654321   1223333321  1124677888877889999999998887


Q ss_pred             CC-CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           92 SG-SFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        92 ~~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      .. ++++++ +|..+....+..+++...+.+.++.+
T Consensus       101 ~~~~~~lv~-gD~i~~~~~l~~ll~~~~~~~~~~tv  135 (292)
T PRK15480        101 GGDDCALVL-GDNIFYGHDLPKLMEAAVNKESGATV  135 (292)
T ss_pred             CCCCEEEEE-CCeeeeccCHHHHHHHHHhCCCCeEE
Confidence            54 655554 66665555688888877655555543

>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional

Probab=95.60  E-value=0.56  Score=34.92  Aligned_cols=88  Identities=14%  Similarity=0.167  Sum_probs=59.4

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHHHHHHhhcCCCEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAYIHGLKHASGSFVV   97 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~n~g~~~a~~d~i~   97 (242)
                      +....++.+++.+...    .-+++|+-+..     +.......    ..+.++.... ..|...+.-.|++....++++
T Consensus        31 ~g~~ll~~~i~~l~~~----~~~ivvv~~~~-----~~~~~~~~----~~~~~i~~~~~~~G~~~si~~~l~~~~~~~vl   97 (200)
T PRK02726         31 QGVPLLQRVARIAAAC----ADEVYIITPWP-----ERYQSLLP----PGCHWLREPPPSQGPLVAFAQGLPQIKTEWVL   97 (200)
T ss_pred             CCEeHHHHHHHHHHhh----CCEEEEECCCH-----HHHHhhcc----CCCeEecCCCCCCChHHHHHHHHHhCCCCcEE
Confidence            3445677788877543    12566664321     12222211    1355665433 368999999999998889999


Q ss_pred             EEeCCCC-CCCCChHHHHHHHHh
Q 026146           98 IMDADLS-HHPKYLPSFIKKQLE  119 (242)
Q Consensus        98 ~lD~D~~-~~~~~l~~l~~~~~~  119 (242)
                      ++++|.- ++++.++.+++...+
T Consensus        98 v~~~D~P~i~~~~i~~l~~~~~~  120 (200)
T PRK02726         98 LLACDLPRLTVDVLQEWLQQLEN  120 (200)
T ss_pred             EEeCCCCCCCHHHHHHHHHHhhc
Confidence            9999987 789999999988754

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=95.54  E-value=0.012  Score=45.59  Aligned_cols=113  Identities=12%  Similarity=0.038  Sum_probs=54.8

Q ss_pred             cCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchh
Q 026146           91 ASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR  170 (242)
Q Consensus        91 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  170 (242)
                      ...+|++++|+|+.+...-|..++..+. +..++.+|.+........    ......   ..  . ..........|+.+
T Consensus        85 ~~~~Wf~~~DDDtyv~~~~L~~~L~~~~-~~~~~yiG~~~~~~~~~~----~~~~~~---~~--~-~~~~~~f~~GGaG~  153 (252)
T PF02434_consen   85 SDKDWFCFADDDTYVNVENLRRLLSKYD-PSEPIYIGRPSGDRPIEI----IHRFNP---NK--S-KDSGFWFATGGAGY  153 (252)
T ss_dssp             HT-SEEEEEETTEEE-HHHHHHHHTTS--TTS--EEE-EE--------------------------------EE-GGG-E
T ss_pred             CCceEEEEEeCCceecHHHHHHHHhhCC-CccCEEeeeeccCcccee----eccccc---cc--c-CcCceEeeCCCeeH
Confidence            3569999999999987777777776654 466778887764321100    000000   00  0 00011223456668


Q ss_pred             hcchHHHHHhhhc-----cc----CCCcccchHHHHHHHH-cCCceEEeeeeee
Q 026146          171 LYKKSVLEDVISS-----CV----SKGYVFQMEMIVRACR-KGYHIEEVPITFV  214 (242)
Q Consensus       171 ~~rr~~~~~~~~~-----~~----~~~~~~d~~~~~~~~~-~g~~i~~~p~~~~  214 (242)
                      +++|.+++++...     ..    ...+.+|..+..-+.. .|.+....|.-..
T Consensus       154 vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~fhs  207 (252)
T PF02434_consen  154 VLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPLFHS  207 (252)
T ss_dssp             EEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT---
T ss_pred             HHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechhhcc
Confidence            9999999998221     11    1235789999888877 8988887764433

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form

Probab=95.44  E-value=0.37  Score=38.10  Aligned_cols=104  Identities=15%  Similarity=0.172  Sum_probs=65.3

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      .+|.++. +.+...|+.+...   .--+|+||-....   .+.++++...  .-+.++.+...+...|.+.|.-.|....
T Consensus        24 Llpv~gk-PmI~~~L~~l~~a---Gi~~I~iv~~~~~---~~~~~~~lg~g~~~g~~i~~~~q~~~~Gta~al~~a~~~l   96 (286)
T TIGR01207        24 LLPIYDK-PMIYYPLSTLMLA---GIRDILIISTPQD---TPRFQQLLGDGSQWGVNLSYAVQPSPDGLAQAFIIGEDFI   96 (286)
T ss_pred             eeEECCE-EhHHHHHHHHHHC---CCCEEEEEecCCc---HHHHHHHhccccccCceEEEEEccCCCCHHHHHHHHHHHh
Confidence            5777886 7888888888754   2236666643221   1223333221  1124577777777889999999999887


Q ss_pred             CC-CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEE
Q 026146           92 SG-SFVVIMDADLSHHPKYLPSFIKKQLETGASIV  125 (242)
Q Consensus        92 ~~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v  125 (242)
                      .. +++++ -+|..+...-+..+++...+.+.++.
T Consensus        97 ~~~~~~li-~gD~i~~~~~l~~ll~~~~~~~~~~t  130 (286)
T TIGR01207        97 GGDPSALV-LGDNIFYGHDLSDLLKRAAARESGAT  130 (286)
T ss_pred             CCCCEEEE-ECCEeccccCHHHHHHHHHhcCCCcE
Confidence            64 45555 57766656678888877655555543

This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.

>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional

Probab=95.44  E-value=0.27  Score=37.59  Aligned_cols=91  Identities=11%  Similarity=0.166  Sum_probs=51.9

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeC
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDA  101 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~  101 (242)
                      ..+..+++.+.+..  .--+|+|+-+.  +    .+.++.+.++ ..+.+.......|.+ ..-.++.....|.++++++
T Consensus        28 Pli~~~i~~l~~~~--~~~~ivv~t~~--~----~i~~~~~~~~-~~v~~~~~~~~~g~~-~~~~a~~~~~~d~~lv~~~   97 (238)
T PRK13368         28 PMIQHVYERAAQAA--GVEEVYVATDD--Q----RIEDAVEAFG-GKVVMTSDDHLSGTD-RLAEVMLKIEADIYINVQG   97 (238)
T ss_pred             CHHHHHHHHHHhcC--CCCeEEEECCh--H----HHHHHHHHcC-CeEEecCccCCCccH-HHHHHHHhCCCCEEEEEcC
Confidence            44556677776541  12366665432  2    2333333332 334332223333433 3444566555689999999


Q ss_pred             CCC-CCCCChHHHHHHHHhcCC
Q 026146          102 DLS-HHPKYLPSFIKKQLETGA  122 (242)
Q Consensus       102 D~~-~~~~~l~~l~~~~~~~~~  122 (242)
                      |.. +.+..+.++++.+.+.+.
T Consensus        98 D~P~i~~~~i~~l~~~~~~~~~  119 (238)
T PRK13368         98 DEPMIRPRDIDTLIQPMLDDPS  119 (238)
T ss_pred             CcCcCCHHHHHHHHHHHHHCCC
Confidence            984 789999999998865443

>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production

Probab=95.43  E-value=0.25  Score=37.19  Aligned_cols=97  Identities=20%  Similarity=0.185  Sum_probs=60.8

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---CCCE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---SGSF   95 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---~~d~   95 (242)
                      +....+..+++.+.+..  ..-+++||-+...   .+....+........+.++...  .|...+...|++..   ..++
T Consensus        26 ~Gkpll~~~i~~l~~~~--~~~~ivVv~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~si~~al~~~~~~~~~~   98 (218)
T cd02516          26 GGKPVLEHTLEAFLAHP--AIDEIVVVVPPDD---IDLAKELAKYGLSKVVKIVEGG--ATRQDSVLNGLKALPDADPDI   98 (218)
T ss_pred             CCeEHHHHHHHHHhcCC--CCCEEEEEeChhH---HHHHHHHHhcccCCCeEEECCc--hHHHHHHHHHHHhcccCCCCE
Confidence            45577888888886541  1236676655322   2222222111111234444432  35678899999886   4789


Q ss_pred             EEEEeCCCC-CCCCChHHHHHHHHhcCC
Q 026146           96 VVIMDADLS-HHPKYLPSFIKKQLETGA  122 (242)
Q Consensus        96 i~~lD~D~~-~~~~~l~~l~~~~~~~~~  122 (242)
                      ++++++|.- ++++.++.+++.+.+.+.
T Consensus        99 vlv~~~D~P~i~~~~i~~li~~~~~~~~  126 (218)
T cd02516          99 VLIHDAARPFVSPELIDRLIDALKEYGA  126 (218)
T ss_pred             EEEccCcCCCCCHHHHHHHHHHHhhCCc
Confidence            999999977 889999999998865443

4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.

>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase

Probab=95.40  E-value=0.39  Score=36.60  Aligned_cols=185  Identities=12%  Similarity=0.084  Sum_probs=93.5

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCC
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASG   93 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~   93 (242)
                      .+|.-+. ..+...++++.+.   .--+++|+-+...+...+.+.+.. .+ +..+.++......|.+.+...|......
T Consensus        25 l~~i~g~-~li~~~l~~l~~~---~~~~i~vv~~~~~~~~~~~~~~~~-~~-~~~i~~~~~~~~~g~~~sl~~a~~~i~~   98 (236)
T cd04189          25 LIPVAGK-PIIQYAIEDLREA---GIEDIGIVVGPTGEEIKEALGDGS-RF-GVRITYILQEEPLGLAHAVLAARDFLGD   98 (236)
T ss_pred             eeEECCc-chHHHHHHHHHHC---CCCEEEEEcCCCHHHHHHHhcchh-hc-CCeEEEEECCCCCChHHHHHHHHHhcCC
Confidence            3444444 7788888888764   223677665543222222222211 11 2346666666667888889888887653


Q ss_pred             CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhC---CCccccccchh
Q 026146           94 SFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLW---PGVSDLTGSFR  170 (242)
Q Consensus        94 d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~  170 (242)
                      +-++++.+|...+.+ +..+++.+.+.+.+++.......+..  ...... . ..  .........   ........|..
T Consensus        99 ~~~li~~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~-~-d~--~~v~~~~ek~~~~~~~~~~~Giy  171 (236)
T cd04189          99 EPFVVYLGDNLIQEG-ISPLVRDFLEEDADASILLAEVEDPR--RFGVAV-V-DD--GRIVRLVEKPKEPPSNLALVGVY  171 (236)
T ss_pred             CCEEEEECCeecCcC-HHHHHHHHHhcCCceEEEEEECCCcc--cceEEE-E-cC--CeEEEEEECCCCCCCCEEEEEEE
Confidence            445668889887665 55566666555666544322211111  000000 0 00  000000000   01122345666


Q ss_pred             hcchHHHHHhhhcccC-CCcccchHHHHHHHHcCCceEEeee
Q 026146          171 LYKKSVLEDVISSCVS-KGYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       171 ~~rr~~~~~~~~~~~~-~~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      .++.++++.+-..... .+-.+-.++...+...|.++...+.
T Consensus       172 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~i~~g~~v~~~~~  213 (236)
T cd04189         172 AFTPAIFDAISRLKPSWRGELEITDAIQWLIDRGRRVGYSIV  213 (236)
T ss_pred             EeCHHHHHHHHhcCCCCCCeEEHHHHHHHHHHcCCcEEEEEc
Confidence            7898888766211111 1111113566677788887776654

This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in

>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat

Probab=95.27  E-value=0.22  Score=38.04  Aligned_cols=100  Identities=12%  Similarity=0.182  Sum_probs=61.2

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVI   98 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~   98 (242)
                      +....+..+++.+.+...  .-+++|+-+.... . +.+.++....   .+.++..+.. +.-.....+++....+++++
T Consensus        22 ~Gkpli~~~i~~l~~~~~--~~~ivVv~~~~~~-~-~~i~~~~~~~---~v~~v~~~~~-~~l~~~~~~~~~~~~d~vli   93 (233)
T cd02518          22 GGKPLLEHLLDRLKRSKL--IDEIVIATSTNEE-D-DPLEALAKKL---GVKVFRGSEE-DVLGRYYQAAEEYNADVVVR   93 (233)
T ss_pred             CCccHHHHHHHHHHhCCC--CCeEEEECCCCcc-c-HHHHHHHHHc---CCeEEECCch-hHHHHHHHHHHHcCCCEEEE
Confidence            445777888888865421  2256766554431 1 2233333322   3555655543 22222333444556799999


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146           99 MDADLS-HHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      +++|.- ++++.++++++.+...+.+++.
T Consensus        94 ~~~D~P~i~~~~i~~li~~~~~~~~~~~~  122 (233)
T cd02518          94 ITGDCPLIDPEIIDAVIRLFLKSGADYTS  122 (233)
T ss_pred             eCCCCCCCCHHHHHHHHHHHHhCCCCEEe
Confidence            999988 8899999999988766677765

Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.

>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry

Probab=95.24  E-value=0.18  Score=38.78  Aligned_cols=184  Identities=15%  Similarity=0.151  Sum_probs=104.1

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC--CCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG--EDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      +|..++...|...|+.+...   ..-++|+|-.+..   .+.+.++.....  ...+.++..+...|.+.|.-.+.....
T Consensus        25 l~i~g~~pli~~~l~~l~~~---g~~~ii~V~~~~~---~~~i~~~~~~~~~~~~~i~~i~~~~~~Gta~al~~a~~~i~   98 (248)
T PF00483_consen   25 LPIGGKYPLIDYVLENLANA---GIKEIIVVVNGYK---EEQIEEHLGSGYKFGVKIEYIVQPEPLGTAGALLQALDFIE   98 (248)
T ss_dssp             SEETTEEEHHHHHHHHHHHT---TCSEEEEEEETTT---HHHHHHHHTTSGGGTEEEEEEEESSSSCHHHHHHHTHHHHT
T ss_pred             ceecCCCcchhhhhhhhccc---CCceEEEEEeecc---cccccccccccccccccceeeecccccchhHHHHHHHHHhh
Confidence            45556557888899998775   2336445544322   233444433322  124778777777899999999999887


Q ss_pred             CCE----EEEEeCCCCCCCCChHHHHHHHHhcCCc--EEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCC----c
Q 026146           93 GSF----VVIMDADLSHHPKYLPSFIKKQLETGAS--IVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPG----V  162 (242)
Q Consensus        93 ~d~----i~~lD~D~~~~~~~l~~l~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  162 (242)
                      .+-    ++++.+|...+. .+..+++.+.+.+.+  +.+...........+.-...  .   ...+......+.    .
T Consensus        99 ~~~~~~~~lv~~gD~i~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d--~---~~~V~~~~EKP~~~~~~  172 (248)
T PF00483_consen   99 EEDDDEDFLVLNGDIIFDD-DLQDMLEFHRESNADGTVTLLVVPVEDPSRYGVVEVD--E---DGRVIRIVEKPDNPNAS  172 (248)
T ss_dssp             TSEE-SEEEEETTEEEEST-THHHHHHHHHHHSSCESEEEEEEESSGGGGSEEEEEE--T---TSEEEEEEESCSSHSHS
T ss_pred             hccccceEEEEeccccccc-hhhhHHHhhhccccccccccccccccccccceeeeec--c---ceeEEEEeccCcccccc
Confidence            654    999999988777 778888887766653  33332222111100000000  0   000011111111    1


Q ss_pred             cccccchhhcchHHHHHhhhcccC--CCcccchHHHHHHHHcCCceEEee
Q 026146          163 SDLTGSFRLYKKSVLEDVISSCVS--KGYVFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       163 ~~~~g~~~~~rr~~~~~~~~~~~~--~~~~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      ....++.+++++++++.+......  ....+-.+....+...|..+....
T Consensus       173 ~~~~~G~Y~~~~~~~~~~~~~~~~~~~~~~~l~d~i~~~~~~~~~~~~~~  222 (248)
T PF00483_consen  173 NLINTGIYIFKPEIFDFLLEMIKENARGEDFLTDAIPKLLEQGKKVYAFI  222 (248)
T ss_dssp             SEEEEEEEEEETHHHHHHHHHHHTCTTSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             eeccCceEEEcchHHHHHhhhhhccchhhhHHHHHHHHHHHcCCceEEEE
Confidence            234567778999999988322122  222223567778888887765544

; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....

>PLN02190 cellulose synthase-like protein

Probab=95.21  E-value=0.028  Score=49.45  Aligned_cols=52  Identities=12%  Similarity=0.165  Sum_probs=39.6

Q ss_pred             EEEeeCCCCcc-----hHHHHHHHHhhc----CCCEEEEEeCCCCC-CCCChHHHHHHHHhc
Q 026146           69 ILLRPRPKKLG-----LGTAYIHGLKHA----SGSFVVIMDADLSH-HPKYLPSFIKKQLET  120 (242)
Q Consensus        69 ~~~~~~~~~~g-----~~~a~n~g~~~a----~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~  120 (242)
                      +.|+.++++.|     |++|+|..++-+    .+++|+-+|.|-.. +++.+.+.+-.+.++
T Consensus       254 LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~  315 (756)
T PLN02190        254 LVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQK  315 (756)
T ss_pred             EEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCC
Confidence            44444444444     899999998654    69999999999875 688899988887643

>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism]

Probab=95.20  E-value=0.12  Score=38.23  Aligned_cols=93  Identities=17%  Similarity=0.288  Sum_probs=64.3

Q ss_pred             ccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCc-chHHHHHHHHhhcCCCEE
Q 026146           18 YNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKL-GLGTAYIHGLKHASGSFV   96 (242)
Q Consensus        18 ~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~-g~~~a~n~g~~~a~~d~i   96 (242)
                      .|....++..++.|..|.   + .++|.-+...+  .  ...       ..+.++...... |+-.+.-.|+++..++++
T Consensus        26 ~~g~~lie~v~~~L~~~~---~-~vvi~~~~~~~--~--~~~-------~g~~vv~D~~~~~GPL~Gi~~al~~~~~~~~   90 (192)
T COG0746          26 LNGRPLIEHVIDRLRPQV---D-VVVISANRNQG--R--YAE-------FGLPVVPDELPGFGPLAGILAALRHFGTEWV   90 (192)
T ss_pred             eCCeEHHHHHHHHhcccC---C-EEEEeCCCchh--h--hhc-------cCCceeecCCCCCCCHHHHHHHHHhCCCCeE
Confidence            345556677777776653   3 45555444322  1  111       135566655555 999999999999999999


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCcEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGASIV  125 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v  125 (242)
                      +|+=.|.- ++++.++.+.....+.+..++
T Consensus        91 ~v~~~D~P~i~~~lv~~l~~~~~~~~~~~~  120 (192)
T COG0746          91 LVLPCDMPFIPPELVERLLSAFKQTGAAIV  120 (192)
T ss_pred             EEEecCCCCCCHHHHHHHHHhhcccCCcEE
Confidence            99999988 788899999998876553333

>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=95.09  E-value=0.25  Score=41.89  Aligned_cols=103  Identities=16%  Similarity=0.150  Sum_probs=66.3

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-   92 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-   92 (242)
                      ++|..+. ..+...++++.+.   .--+++++-....   .++ .++....  ..+.++..+...|.+.+...+++... 
T Consensus        25 l~pi~g~-pli~~~l~~l~~~---gi~~iiiv~~~~~---~~i-~~~~~~~--~~i~~~~~~~~~Gt~~al~~a~~~l~~   94 (459)
T PRK14355         25 MHPLAGR-PMVSWPVAAAREA---GAGRIVLVVGHQA---EKV-REHFAGD--GDVSFALQEEQLGTGHAVACAAPALDG   94 (459)
T ss_pred             eceeCCc-cHHHHHHHHHHhc---CCCeEEEEECCCH---HHH-HHHhccC--CceEEEecCCCCCHHHHHHHHHHHhhc
Confidence            3444443 6677778877654   2235666654322   222 2222221  24666666667788889998888764 


Q ss_pred             -CCEEEEEeCCC-CCCCCChHHHHHHHHhcCCcEEE
Q 026146           93 -GSFVVIMDADL-SHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        93 -~d~i~~lD~D~-~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                       .++++++++|. .+++..++++++.+.+.+.++.+
T Consensus        95 ~~~~vlv~~gD~p~~~~~~i~~l~~~~~~~~~~~~v  130 (459)
T PRK14355         95 FSGTVLILCGDVPLLRAETLQGMLAAHRATGAAVTV  130 (459)
T ss_pred             cCCcEEEEECCccCcCHHHHHHHHHHHHhcCCcEEE
Confidence             47999999998 57888899999887665555543

>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.08  E-value=0.048  Score=40.60  Aligned_cols=70  Identities=11%  Similarity=0.010  Sum_probs=41.1

Q ss_pred             CCeEEEEEeCCCCCC--hHHHHHHHHHHhCCCcEEEeeCCCCc-------c---hHHHHHHHHhhcC-------CCEEEE
Q 026146           38 VDFEIIVVDDGSPDG--TQEVVKQLQQLYGEDRILLRPRPKKL-------G---LGTAYIHGLKHAS-------GSFVVI   98 (242)
Q Consensus        38 ~~~eiivvd~~s~d~--t~~~l~~~~~~~~~~~~~~~~~~~~~-------g---~~~a~n~g~~~a~-------~d~i~~   98 (242)
                      +++.+|||+|++.-.  +..+|++.     +...+++..+...       .   ....||.|++..+       .-.|.|
T Consensus         9 ~~l~WIVVEd~~~~~~~v~~lL~~s-----gl~y~hL~~~~p~~~~~~~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyF   83 (207)
T PF03360_consen    9 PPLHWIVVEDSEETTPLVARLLRRS-----GLPYTHLNVKTPSNFKDPRWIKPRGVHQRNAALRWIRNNANHRLDGVVYF   83 (207)
T ss_dssp             SSEEEEEEESSSS--HHHHHHHHHH-----TSEEEEEE----HHHH-------TSHHHHHHHHHHHHSTTTSSS-EEEEE
T ss_pred             CceEEEEEeCCCCCCHHHHHHHHHc-----CCceeEEecCCccccccccccccccHHHHHHHHHHHHhcccCCCCcEEEE
Confidence            588999999987432  44444443     3344444433311       1   1558999998764       467889


Q ss_pred             EeCCCCCCCCChHH
Q 026146           99 MDADLSHHPKYLPS  112 (242)
Q Consensus        99 lD~D~~~~~~~l~~  112 (242)
                      .|+|...+...+++
T Consensus        84 aDDdNtYdl~LF~e   97 (207)
T PF03360_consen   84 ADDDNTYDLRLFDE   97 (207)
T ss_dssp             --TTSEE-HHHHHH
T ss_pred             CCCCCeeeHHHHHH
Confidence            99999888777777

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.

>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan

Probab=94.85  E-value=0.97  Score=36.36  Aligned_cols=44  Identities=11%  Similarity=0.147  Sum_probs=38.3

Q ss_pred             CCcchHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh
Q 026146           76 KKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE  119 (242)
Q Consensus        76 ~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~  119 (242)
                      .-+-.-..||.|++.|+++|++++|.|..+.+++-+.+.+.+.+
T Consensus       111 ~~YPiN~LRNvAr~~a~T~~v~~~DvD~~ps~~l~~~l~~~~~~  154 (317)
T PF13896_consen  111 ALYPINLLRNVARSGARTDYVFLLDVDFLPSPGLYEKLLRFARR  154 (317)
T ss_pred             CCCChHHHHHHHHHhcCcceEEEecceeeeCcchHHHHHHHhhh
Confidence            34557889999999999999999999999999998888877654

>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=94.80  E-value=0.4  Score=41.02  Aligned_cols=184  Identities=11%  Similarity=0.136  Sum_probs=96.2

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-   92 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-   92 (242)
                      .+|..+ ...|..+++++.+.-   .-+++++-....+   . +.+...... ..+.++..+...|.+.+.-.|++... 
T Consensus        26 llpi~g-kpli~~~l~~l~~~g---~~~iivvv~~~~~---~-i~~~~~~~~-~~~~~~~~~~~~Gt~~si~~al~~l~~   96 (482)
T PRK14352         26 LHTLAG-RSMLGHVLHAAAGLA---PQHLVVVVGHDRE---R-VAPAVAELA-PEVDIAVQDEQPGTGHAVQCALEALPA   96 (482)
T ss_pred             eceeCC-ccHHHHHHHHHHhcC---CCcEEEEECCCHH---H-HHHHhhccC-CccEEEeCCCCCCcHHHHHHHHHHhcc
Confidence            344444 457888888887642   2255555443222   2 222222211 23555555666788888888888754 


Q ss_pred             --CCEEEEEeCCC-CCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCC-------c
Q 026146           93 --GSFVVIMDADL-SHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPG-------V  162 (242)
Q Consensus        93 --~d~i~~lD~D~-~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  162 (242)
                        .++++++++|. .+++..++++++.+.+.+.++.+......+....+......  .   ..+......+.       .
T Consensus        97 ~~~~~vlV~~gD~P~~~~~~l~~li~~~~~~~~~~~v~~~~~~~p~~yg~~~~~~--~---g~V~~~~EKp~~~~~~~~~  171 (482)
T PRK14352         97 DFDGTVVVTAGDVPLLDGETLADLVATHTAEGNAVTVLTTTLDDPTGYGRILRDQ--D---GEVTAIVEQKDATPSQRAI  171 (482)
T ss_pred             CCCCeEEEEeCCeeccCHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCEEEECC--C---CCEEEEEECCCCCHHHhhc
Confidence              47899999998 47888899999887765555433221111111011000000  0   00000000000       1


Q ss_pred             cccccchhhcchHHHHHhhhcc-cCC--CcccchHHHHHHHHcCCceEEeee
Q 026146          163 SDLTGSFRLYKKSVLEDVISSC-VSK--GYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       163 ~~~~g~~~~~rr~~~~~~~~~~-~~~--~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      .....+..+|+.+.|.++.... ...  ...+=.++...+...|+++...+.
T Consensus       172 ~~~~~Giy~f~~~~l~~~~~~~~~~~~~~e~~l~d~i~~l~~~g~~V~~~~~  223 (482)
T PRK14352        172 REVNSGVYAFDAAVLRSALARLSSDNAQGELYLTDVLAIAREAGHRVGAHHA  223 (482)
T ss_pred             ceEEEEEEEEEHHHHHHHHHhhCccccCCcEeHHHHHHHHHHCCCeEEEEec
Confidence            1133556789999987652221 111  111125677788888988877664

>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit

Probab=94.75  E-value=1.4  Score=35.02  Aligned_cols=110  Identities=22%  Similarity=0.237  Sum_probs=66.3

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHH-------------------HHHH-hCCCcEEEee
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQ-------------------LQQL-YGEDRILLRP   73 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~-------------------~~~~-~~~~~~~~~~   73 (242)
                      .+|..+. +.|...++.+...   .--+|+|+-.-..+.-.+.+..                   +... .++.++.++.
T Consensus        28 LvpV~gk-PiI~~vl~~l~~~---Gi~~ivivv~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  103 (297)
T TIGR01105        28 MLPIVDK-PMIQYIVDEIVAA---GIKEIVLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVR  103 (297)
T ss_pred             eeEECCE-EHHHHHHHHHHHC---CCCEEEEEecCChHHHHHHHhchHHHHHHHHHhcchhhhhhhhhcCCCCceEEEee
Confidence            4555554 4788888888765   2336777766433322222211                   0000 1123577887


Q ss_pred             CCCCcchHHHHHHHHhhcCCCEEEEEeCCCCCCCC-------ChHHHHHHHHhcCCcEEEE
Q 026146           74 RPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPK-------YLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        74 ~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~-------~l~~l~~~~~~~~~~~v~~  127 (242)
                      .++..|.+.|.-.+......+-++++.+|..+++.       .+..+++.+.+.+..++..
T Consensus       104 q~~~lGtg~Av~~a~~~l~~~~flvv~gD~l~~~~~~~~~~~~l~~li~~~~~~~~~~~~~  164 (297)
T TIGR01105       104 QAQPLGLGHSILCARPVVGDNPFVVVLPDIIIDDATADPLRYNLAAMIARFNETGRSQVLA  164 (297)
T ss_pred             CCCcCchHHHHHHHHHHhCCCCEEEEECCeeccccccccchhHHHHHHHHHHHhCCcEEEE
Confidence            88889999999999988754434455588776542       6778887766555555443

GalF is a non-catalytic subunit of the UTP-glucose pyrophosphorylase modulating the enzyme activity to increase the formation of UDP-glucose

>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial

Probab=94.60  E-value=0.18  Score=36.91  Aligned_cols=95  Identities=13%  Similarity=0.154  Sum_probs=63.0

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC--CCCcchHHHHHHHHhhcCCCEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR--PKKLGLGTAYIHGLKHASGSFV   96 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~--~~~~g~~~a~n~g~~~a~~d~i   96 (242)
                      +....+..+++.+...    ..+|+|+.+...   ....    ..  ...+.++..  +...|...+...|++....+++
T Consensus        25 ~g~pll~~~l~~l~~~----~~~ivv~~~~~~---~~~~----~~--~~~~~~i~~~~~~~~g~~~si~~al~~~~~~~v   91 (186)
T TIGR02665        25 GGKPLIEHVLARLRPQ----VSDLAISANRNP---ERYA----QA--GFGLPVVPDALADFPGPLAGILAGLRWAGTDWV   91 (186)
T ss_pred             CCEEHHHHHHHHHHhh----CCEEEEEcCCCH---HHHh----hc--cCCCcEEecCCCCCCCCHHHHHHHHHhcCCCeE
Confidence            4457778888888643    225677654321   1111    11  112344443  3347889999999998888999


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      +++++|.. ++++.++.+++.+.+.+.++++
T Consensus        92 lv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~  122 (186)
T TIGR02665        92 LTVPCDTPFLPEDLVARLAAALEASDADIAV  122 (186)
T ss_pred             EEEecCCCcCCHHHHHHHHHHhhccCCcEEE
Confidence            99999975 8999999999988654555555

In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.

>TIGR03584 PseF pseudaminic acid CMP-transferase

Probab=94.56  E-value=0.56  Score=35.59  Aligned_cols=153  Identities=12%  Similarity=0.069  Sum_probs=81.4

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC----CCCcchHHHHHHHHhhc---
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR----PKKLGLGTAYIHGLKHA---   91 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~----~~~~g~~~a~n~g~~~a---   91 (242)
                      +....+..+++.+.+..  ..-+|+|..|   +  .+ +.+.+..++ ..+.+.+.    ....|...+...|++..   
T Consensus        22 ~GkpLi~~ti~~a~~s~--~~d~IvVstd---~--~~-i~~~a~~~g-~~v~~~r~~~l~~d~~~~~~si~~~l~~l~~~   92 (222)
T TIGR03584        22 CGKPMIAYSIEAALNSG--LFDKVVVSTD---D--EE-IAEVAKSYG-ASVPFLRPKELADDFTGTAPVVKHAIEELKLQ   92 (222)
T ss_pred             CCcCHHHHHHHHHHhCC--CCCEEEEeCC---C--HH-HHHHHHHcC-CEeEEeChHHHcCCCCCchHHHHHHHHHHhhc
Confidence            34566778888876542  1224444332   1  12 223333332 23333322    22346677777777654   


Q ss_pred             -CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHH--HHHhH-HHHHHHHHhCCCccccc
Q 026146           92 -SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRK--LTSRG-ANVLAQTLLWPGVSDLT  166 (242)
Q Consensus        92 -~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~  166 (242)
                       ..|+++++++|.. ..++.++++++.+.+.+++.+++...........+.+...  ..... .....+....++.....
T Consensus        93 ~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~rQd~~~~y~~n  172 (222)
T TIGR03584        93 KQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSFAFPIQRAFKLKENGGVEMFFPEHFNTRSQDLEEAYHDA  172 (222)
T ss_pred             CCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeeccCCChHHheEECCCCcEEecCCCcccCCCCCCchheeeC
Confidence             3699999999988 7899999999999876688777643321110000000000  00000 00000111123445578


Q ss_pred             cchhhcchHHHHHh
Q 026146          167 GSFRLYKKSVLEDV  180 (242)
Q Consensus       167 g~~~~~rr~~~~~~  180 (242)
                      |+..+++++.+.+-
T Consensus       173 ga~y~~~~~~~~~~  186 (222)
T TIGR03584       173 GQFYWGKSQAWLES  186 (222)
T ss_pred             CeEEEEEHHHHHhc
Confidence            88889999988765

The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.

>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose

Probab=94.50  E-value=0.93  Score=35.06  Aligned_cols=48  Identities=8%  Similarity=-0.024  Sum_probs=36.7

Q ss_pred             CcchHHHHHHHHhhcCC-CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEE
Q 026146           77 KLGLGTAYIHGLKHASG-SFVVIMDADLSHHPKYLPSFIKKQLETGASIV  125 (242)
Q Consensus        77 ~~g~~~a~n~g~~~a~~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v  125 (242)
                      ..|.++|+-.+.+...+ ++++++++|.+.+.+. ..+++...+.+.++.
T Consensus       101 ~~~t~~al~~a~~~~~~~~~~lv~~gD~i~~~dl-~~ll~~h~~~~~~~t  149 (253)
T cd02524         101 NTMTGGRLKRVRRYLGDDETFMLTYGDGVSDVNI-NALIEFHRSHGKLAT  149 (253)
T ss_pred             ccccHHHHHHHHHhcCCCCeEEEEcCCEEECCCH-HHHHHHHHHcCCCEE
Confidence            34568888888888765 8999999998887766 888877666666554

Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.

>PLN03153 hypothetical protein; Provisional

Probab=94.42  E-value=0.27  Score=41.57  Aligned_cols=110  Identities=10%  Similarity=0.031  Sum_probs=64.3

Q ss_pred             cchHHHHHH------HHhh--cCCCEEEEEeCCCCCCCCChHHHHHHHHh--cCCcEEEEEEEeecCCccCchhhHHHHH
Q 026146           78 LGLGTAYIH------GLKH--ASGSFVVIMDADLSHHPKYLPSFIKKQLE--TGASIVTGTRYVRSGGVHGWNLMRKLTS  147 (242)
Q Consensus        78 ~g~~~a~n~------g~~~--a~~d~i~~lD~D~~~~~~~l~~l~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~  147 (242)
                      .|.+.++..      .++.  -..+|++|+|+|+.+..   .+|++.+..  +.....+|.........   ..      
T Consensus       188 ~Gh~sa~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~---~NLv~~Ls~YDptkp~YIGs~Se~~~qn---~~------  255 (537)
T PLN03153        188 TGHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNA---DNLVAVLSKYDPSEMVYVGGPSESHSAN---SY------  255 (537)
T ss_pred             CCcHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccccH---HHHHHHHhhcCCCCCEEecccccccccc---cc------
Confidence            466666655      3333  35799999999999864   555555542  45556666554322110   00      


Q ss_pred             hHHHHHHHHHhCCCccccccchhhcchHHHHHhhhc-cc-----CCCcccchHHHHHHHHcCCceEEee
Q 026146          148 RGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISS-CV-----SKGYVFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~-~~-----~~~~~~d~~~~~~~~~~g~~i~~~p  210 (242)
                                .+ ......|+.+++++.+++++... +.     ...++.|..+..-+.+.|.+....|
T Consensus       256 ----------f~-~~fA~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~  313 (537)
T PLN03153        256 ----------FS-HNMAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREP  313 (537)
T ss_pred             ----------cc-cccccCCceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecC
Confidence                      00 01234567778999777776322 11     1246778877777778887776555

>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]

Probab=94.40  E-value=1.5  Score=35.88  Aligned_cols=180  Identities=13%  Similarity=0.096  Sum_probs=105.6

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      +|.-| .+.+...|+.|.++   .--+++++-.    ...+.++++...  ..+.++.+.......|-++++-.+.+...
T Consensus        27 lpI~g-kPii~~~l~~L~~~---Gv~eivi~~~----y~~~~i~~~~~d~~~~~~~I~y~~e~~~lGTag~l~~a~~~l~   98 (358)
T COG1208          27 LPIAG-KPLIEYVLEALAAA---GVEEIVLVVG----YLGEQIEEYFGDGEGLGVRITYVVEKEPLGTAGALKNALDLLG   98 (358)
T ss_pred             ceeCC-ccHHHHHHHHHHHC---CCcEEEEEec----cchHHHHHHHhcccccCCceEEEecCCcCccHHHHHHHHHhcC
Confidence            44445 46788899999765   3447777733    223334443332  12357888888888999999999999998


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhC-----CCcccccc
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLW-----PGVSDLTG  167 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g  167 (242)
                      ++-++++.+|...+.+ +..+++..+++...+.............+.-.... .  . .....+...     ..-....+
T Consensus        99 ~~~f~v~~GDv~~~~d-l~~l~~~~~~~~~~~~~~~~~~~~~~~~Gvv~~~~-~--~-~~v~~f~ekp~~~~~~~~~in~  173 (358)
T COG1208          99 GDDFLVLNGDVLTDLD-LSELLEFHKKKGALATIALTRVLDPSEFGVVETDD-G--D-GRVVEFREKPGPEEPPSNLINA  173 (358)
T ss_pred             CCcEEEEECCeeeccC-HHHHHHHHHhccCccEEEEEecCCCCcCceEEecC-C--C-ceEEEEEecCCCCCCCCceEEe
Confidence            8999999999999988 99999988765333332211111111000000000 0  0 011111111     12235677


Q ss_pred             chhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEee
Q 026146          168 SFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       168 ~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      +..++++++++-+ .......+.  .++.-.+.+.|..+.-.+
T Consensus       174 Giyi~~~~v~~~i-~~~~~~~~~--~~~~~~l~~~~~~v~~~~  213 (358)
T COG1208         174 GIYIFDPEVFDYI-EKGERFDFE--EELLPALAAKGEDVYGYV  213 (358)
T ss_pred             EEEEECHHHhhhc-ccCCcccch--hhHHHHHHhCCCcEEEEE
Confidence            8889999999933 112233332  267777888886444443

>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase

Probab=94.39  E-value=0.25  Score=41.68  Aligned_cols=96  Identities=16%  Similarity=0.155  Sum_probs=62.2

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-C
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-G   93 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~   93 (242)
                      +|.-+ ...+..+++.+.+.-   ..+++++-+...    +.+++....+   .+.++......|.+.+...++.... .
T Consensus        23 ~~i~g-kpli~~~l~~l~~~g---~~~iiiv~~~~~----~~i~~~~~~~---~i~~~~~~~~~G~~~ai~~a~~~l~~~   91 (451)
T TIGR01173        23 HPLAG-KPMLEHVIDAARALG---PQKIHVVYGHGA----EQVRKALANR---DVNWVLQAEQLGTGHAVLQALPFLPDD   91 (451)
T ss_pred             ceeCC-ccHHHHHHHHHHhCC---CCeEEEEECCCH----HHHHHHhcCC---CcEEEEcCCCCchHHHHHHHHHhcCCC
Confidence            34434 477888888886542   235566544221    2233333322   3555555556788888888888874 4


Q ss_pred             CEEEEEeCCC-CCCCCChHHHHHHHHhcC
Q 026146           94 SFVVIMDADL-SHHPKYLPSFIKKQLETG  121 (242)
Q Consensus        94 d~i~~lD~D~-~~~~~~l~~l~~~~~~~~  121 (242)
                      +.++++++|. .++++.++++++.+.+.+
T Consensus        92 ~~~lv~~~D~p~i~~~~~~~l~~~~~~~~  120 (451)
T TIGR01173        92 GDVLVLYGDVPLISAETLERLLEAHRQNG  120 (451)
T ss_pred             CcEEEEECCcCCcCHHHHHHHHHHHhhCC
Confidence            7899999998 478888999998876543

This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.

>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase

Probab=94.39  E-value=0.78  Score=35.57  Aligned_cols=108  Identities=15%  Similarity=0.167  Sum_probs=64.8

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHH-------------------HHHHhCCCcEEEeeC
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQ-------------------LQQLYGEDRILLRPR   74 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~-------------------~~~~~~~~~~~~~~~   74 (242)
                      .+|.-++ ..|...++++.+.   .--+++|+-....+...+.+.+                   ...-.+...+.+...
T Consensus        25 llpi~g~-pli~~~l~~l~~~---gi~~v~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  100 (260)
T TIGR01099        25 MLPIVDK-PLIQYVVEEAVEA---GIEDILIVTGRGKRAIEDHFDTSYELEHQLEKRGKEELLKEVRSISPLATIFYVRQ  100 (260)
T ss_pred             eEEECCE-EHHHHHHHHHHhC---CCCEEEEEeCCcHHHHHHHhcccHHHHHHHHhhhhHHHHHHhhhccccceEEEEec
Confidence            4555554 7778888888654   2236677655432222222210                   000011123555555


Q ss_pred             CCCcchHHHHHHHHhhcCCCEEEEEeCCCCCCCC--ChHHHHHHHHhcCCcEE
Q 026146           75 PKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPK--YLPSFIKKQLETGASIV  125 (242)
Q Consensus        75 ~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~--~l~~l~~~~~~~~~~~v  125 (242)
                      +...|.+.|...+......+-++++.+|..+...  .+..+++.+.+.+.+++
T Consensus       101 ~~~~G~~~al~~~~~~~~~~~~lv~~gD~~~~~~~~~~~~l~~~~~~~~~~ii  153 (260)
T TIGR01099       101 KEQKGLGHAVLCAEPFVGDEPFAVILGDDIVVSEEPALKQMIDLYEKYGCSII  153 (260)
T ss_pred             CCCCCHHHHHHHHHHhhCCCCEEEEeccceecCCcHHHHHHHHHHHHhCCCEE
Confidence            5567899999888887655667777888776544  78899988876677753

Built to distinquish between the highly similar genes galU and galF

>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=94.32  E-value=0.28  Score=41.45  Aligned_cols=96  Identities=14%  Similarity=0.145  Sum_probs=60.9

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--CCEEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--GSFVVI   98 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--~d~i~~   98 (242)
                      ...+..+|+++.+.   ...+++|+-....    +.++++.....  .+.++..+...|.+.+...+++...  .+.+++
T Consensus        29 kpli~~~l~~l~~~---g~~~iivvv~~~~----~~i~~~~~~~~--~i~~v~~~~~~G~~~sv~~~~~~l~~~~~~vlV   99 (450)
T PRK14360         29 KSLVERVLDSCEEL---KPDRRLVIVGHQA----EEVEQSLAHLP--GLEFVEQQPQLGTGHAVQQLLPVLKGFEGDLLV   99 (450)
T ss_pred             hhHHHHHHHHHHhC---CCCeEEEEECCCH----HHHHHHhcccC--CeEEEEeCCcCCcHHHHHHHHHHhhccCCcEEE
Confidence            36677788887654   2235555544322    12333332222  4666665556677888877877653  466888


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhcCCcEE
Q 026146           99 MDADLS-HHPKYLPSFIKKQLETGASIV  125 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v  125 (242)
                      +++|.. +.+..++++++.+.+.+.++.
T Consensus       100 ~~~D~P~i~~~~l~~ll~~~~~~~~~~~  127 (450)
T PRK14360        100 LNGDVPLLRPETLEALLNTHRSSNADVT  127 (450)
T ss_pred             EeCCccccCHHHHHHHHHHHHhcCCcEE
Confidence            999974 788899999988876665553

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=94.30  E-value=0.048  Score=42.28  Aligned_cols=126  Identities=11%  Similarity=0.074  Sum_probs=71.1

Q ss_pred             cCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHH-------HHHHHHhC-CCc
Q 026146           91 ASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGAN-------VLAQTLLW-PGV  162 (242)
Q Consensus        91 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~  162 (242)
                      +..|||++.|+|..++...+.++++..++.+..+..+........ ..+....+.......       ........ +..
T Consensus       115 ~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~-~~~~iT~R~~~~~vhr~~~~~~~~~~~~~~ppct  193 (294)
T PF05212_consen  115 APYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSE-IHHPITKRRPDSEVHRKTRGGPRCCDDSTGPPCT  193 (294)
T ss_pred             ccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCce-eeeeEEeecCCceeEeccCCCCCcCCCCCCCCcc
Confidence            468999999999999999999999999877777665533311110 000100000000000       00000001 111


Q ss_pred             cccccchhhcchHHHHHhhhcc---cCCCcccchHHHHHHHHcCCceEEeeeeeeecc
Q 026146          163 SDLTGSFRLYKKSVLEDVISSC---VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRV  217 (242)
Q Consensus       163 ~~~~g~~~~~rr~~~~~~~~~~---~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~  217 (242)
                      ..+=...-+|+|++++-+-...   -.++++-|+.+..-+.....+|..+....+.|.
T Consensus       194 ~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~~~~~~kiGVVDs~~VvH~  251 (294)
T PF05212_consen  194 GFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCAGDRHKKIGVVDSQYVVHT  251 (294)
T ss_pred             eEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHhccccccEEEEeeEEEEEc
Confidence            1111122369999998874332   247788888887777667788888876554443

>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed

Probab=94.04  E-value=1.5  Score=33.19  Aligned_cols=93  Identities=18%  Similarity=0.190  Sum_probs=56.6

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-CCCEEEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-SGSFVVIM   99 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-~~d~i~~l   99 (242)
                      ...+..+++.+.+..  ..-+|+|+-+...  .....+.+....  ..+.++...  .+...+.-.|++.. ..++++++
T Consensus        31 ~pli~~~l~~l~~~~--~~~~ivvv~~~~~--~~~~~~~~~~~~--~~~~~~~~~--~~~~~sv~~~l~~~~~~d~vlv~  102 (227)
T PRK00155         31 KPILEHTLEAFLAHP--RIDEIIVVVPPDD--RPDFAELLLAKD--PKVTVVAGG--AERQDSVLNGLQALPDDDWVLVH  102 (227)
T ss_pred             EEHHHHHHHHHHcCC--CCCEEEEEeChHH--HHHHHHHhhccC--CceEEeCCc--chHHHHHHHHHHhCCCCCEEEEc
Confidence            355566777775431  1226777755322  122222221111  134444332  25678888888876 57899999


Q ss_pred             eCCCC-CCCCChHHHHHHHHhcC
Q 026146          100 DADLS-HHPKYLPSFIKKQLETG  121 (242)
Q Consensus       100 D~D~~-~~~~~l~~l~~~~~~~~  121 (242)
                      ++|.. ++++.++++++.+.+.+
T Consensus       103 ~~D~P~i~~~~i~~li~~~~~~~  125 (227)
T PRK00155        103 DAARPFLTPDDIDRLIEAAEETG  125 (227)
T ss_pred             cCccCCCCHHHHHHHHHHHhhCC
Confidence            99977 88999999999886654

>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase

Probab=94.04  E-value=1.4  Score=33.67  Aligned_cols=101  Identities=17%  Similarity=0.123  Sum_probs=61.3

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHh--CCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEE
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY--GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVV   97 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~--~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~   97 (242)
                      ....+..+++++...   .--++++|.+...   .+.+.++....  .+..+.+...+...|.+.|+..+......+-++
T Consensus        30 ~~pli~~~l~~l~~~---gi~~i~vv~~~~~---~~~~~~~l~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~l  103 (240)
T cd02538          30 DKPMIYYPLSTLMLA---GIREILIISTPED---LPLFKELLGDGSDLGIRITYAVQPKPGGLAQAFIIGEEFIGDDPVC  103 (240)
T ss_pred             CEEhHHHHHHHHHHC---CCCEEEEEeCcch---HHHHHHHHhcccccCceEEEeeCCCCCCHHHHHHHHHHhcCCCCEE
Confidence            457788888888754   2226777654321   12223322211  123455555555678899998888887666667


Q ss_pred             EEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           98 IMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        98 ~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      ++.+|..+.+..+..+++...+.+.++..
T Consensus       104 v~~gD~~~~~~~~~~~~~~~~~~~~~~~~  132 (240)
T cd02538         104 LILGDNIFYGQGLSPILQRAAAQKEGATV  132 (240)
T ss_pred             EEECCEEEccHHHHHHHHHHHhcCCCcEE
Confidence            77888776555678888776654555433

This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.

>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional

Probab=94.00  E-value=0.29  Score=40.23  Aligned_cols=96  Identities=18%  Similarity=0.224  Sum_probs=60.9

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC--CCCcchHHHHHHHHhhcCCCEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR--PKKLGLGTAYIHGLKHASGSFV   96 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~--~~~~g~~~a~n~g~~~a~~d~i   96 (242)
                      +....+...++.+...    .-+|+|+-++..    +.+...   .+  .+.++..  ....|...+...|++....+++
T Consensus        30 ~Gkpll~~~i~~l~~~----~~~iivvv~~~~----~~~~~~---~~--~~~~i~d~~~g~~G~~~si~~gl~~~~~~~v   96 (366)
T PRK14489         30 GGKPLIERVVDRLRPQ----FARIHLNINRDP----ARYQDL---FP--GLPVYPDILPGFQGPLSGILAGLEHADSEYL   96 (366)
T ss_pred             CCeeHHHHHHHHHHhh----CCEEEEEcCCCH----HHHHhh---cc--CCcEEecCCCCCCChHHHHHHHHHhcCCCcE
Confidence            3445667777777532    125666444322    112221   11  1222322  2225888899999999888999


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      +++++|.. ++++.++.+++.+.+.+.++++.
T Consensus        97 lv~~~D~P~i~~~~i~~L~~~~~~~~~~~v~~  128 (366)
T PRK14489         97 FVVACDTPFLPENLVKRLSKALAIEGADIAVP  128 (366)
T ss_pred             EEeeCCcCCCCHHHHHHHHHHhhccCCeEEEE
Confidence            99999965 89999999999876666666654

>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose

Probab=94.00  E-value=2.3  Score=33.14  Aligned_cols=193  Identities=13%  Similarity=0.098  Sum_probs=98.0

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHH---H---HHHh-------------CCCcEEEeeC
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQ---L---QQLY-------------GEDRILLRPR   74 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~---~---~~~~-------------~~~~~~~~~~   74 (242)
                      .+|..++ ..|...++++.+.   .--+++|+-+-..+...+.+.+   +   ....             ++..+.++..
T Consensus        25 llpv~gk-pli~~~l~~l~~~---gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  100 (267)
T cd02541          25 MLPIVDK-PVIQYIVEEAVAA---GIEDIIIVTGRGKRAIEDHFDRSYELEETLEKKGKTDLLEEVRIISDLANIHYVRQ  100 (267)
T ss_pred             eeEECCE-EHHHHHHHHHHHC---CCCEEEEEeCCchHHHHHHhCCcHHHHHHHHhcccHHHhhhhhcccCCceEEEEEc
Confidence            4555555 7888889988764   2225666655433222222211   0   0000             1234566666


Q ss_pred             CCCcchHHHHHHHHhhcCCCEEEEEeCCCCCCCC--ChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHH-HhHHH
Q 026146           75 PKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPK--YLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLT-SRGAN  151 (242)
Q Consensus        75 ~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~--~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~  151 (242)
                      +...|.+.+...+......+-++++.+|..+...  .+.++++.+.+.+.+++.......... .......... .....
T Consensus       101 ~~~~Gt~~al~~~~~~i~~~~~lv~~gD~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d~~~~~~~  179 (267)
T cd02541         101 KEPLGLGHAVLCAKPFIGDEPFAVLLGDDLIDSKEPCLKQLIEAYEKTGASVIAVEEVPPEDV-SKYGIVKGEKIDGDVF  179 (267)
T ss_pred             CCCCChHHHHHHHHHHhCCCceEEEECCeEEeCCchHHHHHHHHHHHhCCCEEEEEEcChhcC-ccceEEEeecCCCCce
Confidence            6668999999999988876677888888876554  588998877655555433222211100 0011000000 00000


Q ss_pred             HHHHHHhCC-----CccccccchhhcchHHHHHhhhcccC-CCcccchHHHHHHHHcCCceEEeeee
Q 026146          152 VLAQTLLWP-----GVSDLTGSFRLYKKSVLEDVISSCVS-KGYVFQMEMIVRACRKGYHIEEVPIT  212 (242)
Q Consensus       152 ~~~~~~~~~-----~~~~~~g~~~~~rr~~~~~~~~~~~~-~~~~~d~~~~~~~~~~g~~i~~~p~~  212 (242)
                      .+......+     .-.....+.+++++++++.+...... ....+-.+....+...| ++...+..
T Consensus       180 ~v~~~~Ekp~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~e~~~~d~i~~l~~~~-~v~~~~~~  245 (267)
T cd02541         180 KVKGLVEKPKPEEAPSNLAIVGRYVLTPDIFDILENTKPGKGGEIQLTDAIAKLLEEE-PVYAYVFE  245 (267)
T ss_pred             EEeEEEECCCCCCCCCceEEEEEEEcCHHHHHHHHhCCCCCCCcEEHHHHHHHHHhcC-CEEEEEee
Confidence            011111111     11223456779999999887321111 11111235556666666 77766654

Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.

>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule

Probab=93.96  E-value=1.1  Score=33.90  Aligned_cols=102  Identities=15%  Similarity=0.150  Sum_probs=58.3

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHH-HHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQ-LQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~-~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-   92 (242)
                      +|..++ ..+..+++.+.+.   ..-++++|-.. .......+.+ +....+...+.+ ......|.+.+...|..... 
T Consensus        24 l~i~g~-pli~~~l~~l~~~---g~~~ivvv~~~-~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~g~~~~l~~a~~~l~~   97 (231)
T cd04183          24 IEVDGK-PMIEWVIESLAKI---FDSRFIFICRD-EHNTKFHLDESLKLLAPNATVVE-LDGETLGAACTVLLAADLIDN   97 (231)
T ss_pred             eEECCE-EHHHHHHHhhhcc---CCceEEEEECh-HHhhhhhHHHHHHHhCCCCEEEE-eCCCCCcHHHHHHHHHhhcCC
Confidence            454454 7788888888765   22256666542 2212222222 212222223332 33456788999999888774 


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHHhcCCc
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQLETGAS  123 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~  123 (242)
                      .+.++++.+|...+.+... ++..+.+.+.+
T Consensus        98 ~~~~lv~~~D~i~~~~~~~-~~~~~~~~~~~  127 (231)
T cd04183          98 DDPLLIFNCDQIVESDLLA-FLAAFRERDLD  127 (231)
T ss_pred             CCCEEEEecceeeccCHHH-HHHHhhccCCc
Confidence            4788899999988877554 44444333433

GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>KOG3917 consensus Beta-1,4-galactosyltransferase B4GALT7/SQV-3 [Carbohydrate transport and metabolism]

Probab=93.90  E-value=0.28  Score=36.63  Aligned_cols=148  Identities=17%  Similarity=0.244  Sum_probs=87.5

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      .++++++|...+.+.+...+--+.+-...  ..-.|+|++. -+                 ..       ++..+.-.|.
T Consensus        74 HklavlVPfRdRfEELl~FvPHM~~FL~rq~v~HHI~vlNQ-vD-----------------~f-------RFNRAsLINV  128 (310)
T KOG3917|consen   74 HKLAVLVPFRDRFEELLEFVPHMSKFLHRQNVSHHILVLNQ-VD-----------------PF-------RFNRASLINV  128 (310)
T ss_pred             eeEEEEechHHHHHHHHHhhHHHHHHHhhcCcceEEEEeec-cC-----------------cc-------eechhhheec
Confidence            57999999998877666555444333322  2334555533 11                 11       2345667788


Q ss_pred             HHhhcC--CCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCcc
Q 026146           87 GLKHAS--GSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVS  163 (242)
Q Consensus        87 g~~~a~--~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (242)
                      |+..|.  .||+++=|.|.. +.++..-.         .-...|++-...++..+          .+.          ..
T Consensus       129 Gf~eas~~~DYiaMhDVDLLPlN~el~Y~---------fP~~~gp~HiasP~lHP----------kYH----------Y~  179 (310)
T KOG3917|consen  129 GFNEASRLCDYIAMHDVDLLPLNPELPYD---------FPGIGGPRHIASPQLHP----------KYH----------YE  179 (310)
T ss_pred             chhhhcchhceeeecccccccCCCCCCCC---------CCccCCcccccCcccCc----------hhh----------hh
Confidence            888876  799999999976 34433211         11122222221111000          011          11


Q ss_pred             ccccchhhcchHHHHHhhhc-ccCCCc-ccchHHHHHHHHcCCceEEee
Q 026146          164 DLTGSFRLYKKSVLEDVISS-CVSKGY-VFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       164 ~~~g~~~~~rr~~~~~~~~~-~~~~~~-~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      .+.||.++++++-+++.-|. ....+| .||-||..|...+|..+....
T Consensus       180 ~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLqltRps  228 (310)
T KOG3917|consen  180 KFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQLTRPS  228 (310)
T ss_pred             hhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceEeccc
Confidence            24578889999999999554 445555 468899999999998776543

>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase

Probab=93.88  E-value=2  Score=33.25  Aligned_cols=50  Identities=8%  Similarity=-0.030  Sum_probs=36.6

Q ss_pred             CCcchHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           76 KKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        76 ~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      +..|-++|+..+.+....+.++++++|.+.+ ..+..+++...+.+.++.+
T Consensus       101 ~~~gt~~al~~~~~~i~~e~flv~~gD~i~~-~dl~~~~~~h~~~~~d~tl  150 (254)
T TIGR02623       101 ESTQTGGRLKRVREYLDDEAFCFTYGDGVAD-IDIKALIAFHRKHGKKATV  150 (254)
T ss_pred             CcCCcHHHHHHHHHhcCCCeEEEEeCCeEec-CCHHHHHHHHHHcCCCEEE
Confidence            4467788888888877667788999998764 4577777777666666543

Members of this family are the enzyme glucose-1-phosphate cytidylyltransferase, also called CDP-glucose pyrophosphorylase, the product of the rfbF gene.

>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=93.85  E-value=0.45  Score=40.20  Aligned_cols=97  Identities=14%  Similarity=0.087  Sum_probs=58.6

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--CCEEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--GSFVVIM   99 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--~d~i~~l   99 (242)
                      ..+..+++.+...   .--+++|+-....    +.+.++..... ..+.++......|.+.+...+++...  .+.++++
T Consensus        34 pli~~~l~~l~~~---gi~~ivvv~~~~~----~~i~~~~~~~~-~~~~~~~~~~~~G~~~sl~~a~~~l~~~~~~~lv~  105 (446)
T PRK14353         34 PMLAHVLAAAASL---GPSRVAVVVGPGA----EAVAAAAAKIA-PDAEIFVQKERLGTAHAVLAAREALAGGYGDVLVL  105 (446)
T ss_pred             hHHHHHHHHHHhC---CCCcEEEEECCCH----HHHHHHhhccC-CCceEEEcCCCCCcHHHHHHHHHHHhccCCCEEEE
Confidence            5667777777654   2235666654322    22333332221 23444444556688888888887653  5778899


Q ss_pred             eCCC-CCCCCChHHHHHHHHhcCCcEEEE
Q 026146          100 DADL-SHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus       100 D~D~-~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ++|. .++++.++.+++..++ +.++++.
T Consensus       106 ~~D~P~i~~~~l~~l~~~~~~-~~~~~i~  133 (446)
T PRK14353        106 YGDTPLITAETLARLRERLAD-GADVVVL  133 (446)
T ss_pred             eCCcccCCHHHHHHHHHhHhc-CCcEEEE
Confidence            9998 5888899999886543 4555443

>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=93.81  E-value=0.56  Score=40.11  Aligned_cols=95  Identities=18%  Similarity=0.252  Sum_probs=61.3

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--CCEEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--GSFVVIM   99 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--~d~i~~l   99 (242)
                      ..|..+++.+.+.   .--+++++-+...    +.++++...   ..+.++..+...|.+.+.-.|++...  .+-++++
T Consensus        36 pli~~~l~~l~~~---gi~~ivvv~~~~~----~~i~~~~~~---~~i~~v~~~~~~Gt~~al~~~~~~l~~~~~~~lV~  105 (481)
T PRK14358         36 PMVAWAVKAARDL---GARKIVVVTGHGA----EQVEAALQG---SGVAFARQEQQLGTGDAFLSGASALTEGDADILVL  105 (481)
T ss_pred             eHHHHHHHHHHhC---CCCeEEEEeCCCH----HHHHHHhcc---CCcEEecCCCcCCcHHHHHHHHHHhhCCCCcEEEE
Confidence            5667777777654   2236676654322    223333322   24677776667788888888887753  2337789


Q ss_pred             eCCC-CCCCCChHHHHHHHHhcCCcEEE
Q 026146          100 DADL-SHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus       100 D~D~-~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      ++|. .+++..++.+++...+.+.++.+
T Consensus       106 ~gD~P~i~~~~l~~ll~~~~~~~~~~ti  133 (481)
T PRK14358        106 YGDTPLLRPDTLRALVADHRAQGSAMTI  133 (481)
T ss_pred             eCCeeccCHHHHHHHHHHHHhcCCeEEE
Confidence            9998 47888899999888766665533

>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family

Probab=93.68  E-value=0.96  Score=33.99  Aligned_cols=177  Identities=11%  Similarity=0.042  Sum_probs=91.0

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHh--CCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY--GEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~--~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      +|..++ ..+..+++.+.+.-   --+++|+-+..    .+.++++....  .+..+.++..+...|.+.++..+.+ ..
T Consensus        24 l~~~g~-pli~~~l~~l~~~~---~~~iivv~~~~----~~~i~~~~~~~~~~~~~i~~~~~~~~~g~~~~l~~~~~-~~   94 (220)
T cd06426          24 LKVGGK-PILETIIDRFIAQG---FRNFYISVNYL----AEMIEDYFGDGSKFGVNISYVREDKPLGTAGALSLLPE-KP   94 (220)
T ss_pred             CeECCc-chHHHHHHHHHHCC---CcEEEEECccC----HHHHHHHHCCccccCccEEEEECCCCCcchHHHHHHHh-hC
Confidence            444554 68888888887652   12666665432    22233332211  1234566555555677777654443 33


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCC-Cccccccchhh
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWP-GVSDLTGSFRL  171 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~  171 (242)
                      .+.++++.+|.+. ...+..+++.+.+.+.++++.........  ........ .   ..+......+ ......++.++
T Consensus        95 ~~~~lv~~~D~i~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~d-~---~~v~~~~ek~~~~~~~~~Giy~  167 (220)
T cd06426          95 TDPFLVMNGDILT-NLNYEHLLDFHKENNADATVCVREYEVQV--PYGVVETE-G---GRITSIEEKPTHSFLVNAGIYV  167 (220)
T ss_pred             CCCEEEEcCCEee-ccCHHHHHHHHHhcCCCEEEEEEEcCCCC--cceEEEEC-C---CEEEEEEECCCCCCeEEEEEEE
Confidence            6778889999755 45678888887766666655432211111  11100000 0   0000000111 11223457778


Q ss_pred             cchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeee
Q 026146          172 YKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       172 ~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      +++++++.+-    ...+.+-.++...+.+.|.++...+.
T Consensus       168 ~~~~~~~~i~----~~~~~~l~~~~~~~i~~~~~i~~~~~  203 (220)
T cd06426         168 LEPEVLDLIP----KNEFFDMPDLIEKLIKEGKKVGVFPI  203 (220)
T ss_pred             EcHHHHhhcC----CCCCcCHHHHHHHHHHCCCcEEEEEe
Confidence            9999988762    11111123566777788877665553

This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.

>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide

Probab=93.66  E-value=1.3  Score=33.87  Aligned_cols=98  Identities=14%  Similarity=0.173  Sum_probs=56.2

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCC--CEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASG--SFV   96 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~--d~i   96 (242)
                      +....+...++.+.+..  .--+|+|+-+.      +.+.++...++ ..+.+.......|.+. .-.+++....  +.+
T Consensus        24 ~gkpll~~~l~~l~~~~--~i~~ivvv~~~------~~i~~~~~~~~-~~~~~~~~~~~~gt~~-~~~~~~~~~~~~d~v   93 (239)
T cd02517          24 AGKPMIQHVYERAKKAK--GLDEVVVATDD------ERIADAVESFG-GKVVMTSPDHPSGTDR-IAEVAEKLDADDDIV   93 (239)
T ss_pred             CCcCHHHHHHHHHHhCC--CCCEEEEECCc------HHHHHHHHHcC-CEEEEcCcccCchhHH-HHHHHHhcCCCCCEE
Confidence            34577788888887541  12256666431      22333333332 2333222222334443 4445555544  899


Q ss_pred             EEEeCCC-CCCCCChHHHHHHHHhc-CCcEEE
Q 026146           97 VIMDADL-SHHPKYLPSFIKKQLET-GASIVT  126 (242)
Q Consensus        97 ~~lD~D~-~~~~~~l~~l~~~~~~~-~~~~v~  126 (242)
                      +++++|. .+++..+..+++.+.+. +.++++
T Consensus        94 lv~~gD~Pli~~~~l~~l~~~~~~~~~~~~~~  125 (239)
T cd02517          94 VNVQGDEPLIPPEMIDQVVAALKDDPGVDMAT  125 (239)
T ss_pred             EEecCCCCCCCHHHHHHHHHHHHhCCCCCEEE
Confidence            9999998 58899999999887654 555543

CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.

>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose

Probab=93.63  E-value=1.9  Score=33.86  Aligned_cols=95  Identities=8%  Similarity=0.056  Sum_probs=58.0

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-   92 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-   92 (242)
                      .+|..++...+..+++.+....  ..-+++||-+..   -.+.+++.... ....+.++..+...|.+.|.-.++.... 
T Consensus        26 ll~l~g~~~li~~~l~~l~~~~--~~~~i~vvt~~~---~~~~v~~~l~~-~~~~~~ii~ep~~~gTa~ai~~a~~~~~~   99 (274)
T cd02509          26 FLKLFGDKSLLQQTLDRLKGLV--PPDRILVVTNEE---YRFLVREQLPE-GLPEENIILEPEGRNTAPAIALAALYLAK   99 (274)
T ss_pred             EeEcCCCCcHHHHHHHHHhcCC--CCCcEEEEechH---HHHHHHHHHhh-cCCCceEEECCCCCCcHHHHHHHHHHHHh
Confidence            4556666788889999887542  122677776531   22334433332 1235666666666788888877776653 


Q ss_pred             ---CCEEEEEeCCCCCCC-CChHHHH
Q 026146           93 ---GSFVVIMDADLSHHP-KYLPSFI  114 (242)
Q Consensus        93 ---~d~i~~lD~D~~~~~-~~l~~l~  114 (242)
                         .++++++.+|..+.. ..+.+.+
T Consensus       100 ~~~~~~vlVl~~D~~i~~~~~f~~~l  125 (274)
T cd02509         100 RDPDAVLLVLPSDHLIEDVEAFLKAV  125 (274)
T ss_pred             cCCCCeEEEecchhcccCHHHHHHHH
Confidence               579999999988652 3333344

GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.

>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety

Probab=93.60  E-value=1.1  Score=33.66  Aligned_cols=51  Identities=18%  Similarity=0.193  Sum_probs=39.8

Q ss_pred             chHHHHHHHHhhcC-----CCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEE
Q 026146           79 GLGTAYIHGLKHAS-----GSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTR  129 (242)
Q Consensus        79 g~~~a~n~g~~~a~-----~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~  129 (242)
                      |...+...|++...     .++++++++|.. ++++.++++++.+.+.+.+.+++..
T Consensus        79 ~~~~~i~~~l~~l~~~~~~~d~vlv~~~D~P~i~~~~i~~~i~~~~~~~~~~~~~~~  135 (223)
T cd02513          79 SSIDVILHALDQLEELGRDFDIVVLLQPTSPLRSAEDIDEAIELLLSEGADSVFSVT  135 (223)
T ss_pred             CcHHHHHHHHHHHHHhCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHhCCCCEEEEEE
Confidence            56677777777543     389999999987 7899999999998776677766543

CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=93.51  E-value=1.9  Score=35.21  Aligned_cols=195  Identities=9%  Similarity=0.055  Sum_probs=103.7

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhc---CCCeEEEEEeCCCCCCh--HHHHHHHHHHhCCCcEEEeeCCCCcc----
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLR---DVDFEIIVVDDGSPDGT--QEVVKQLQQLYGEDRILLRPRPKKLG----   79 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~---~~~~eiivvd~~s~d~t--~~~l~~~~~~~~~~~~~~~~~~~~~g----   79 (242)
                      |.+-++|.+.-+.-..+..++.-=.+..   ......+.+-.-..+..  ...+.+=+..+.  .+.+.....++.    
T Consensus        95 ~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~yg--DIi~~df~Dty~nltl  172 (349)
T KOG2287|consen   95 PELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEARLYG--DIIQVDFEDTYFNLTL  172 (349)
T ss_pred             ceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHHHhC--CEEEEecccchhchHH
Confidence            5677777775433222222221111111   12345555544443322  333444344454  455555444332    


Q ss_pred             -hHHHHHHHHhhc-CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHH
Q 026146           80 -LGTAYIHGLKHA-SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTL  157 (242)
Q Consensus        80 -~~~a~n~g~~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (242)
                       .-..+..+-.++ ..++|+-.|+|..+.++.|-++++....+..+..+|.........+..      .++++-.....-
T Consensus       173 Ktl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~~~~~~~~G~v~~~~~p~R~~------~~KwyVp~~~y~  246 (349)
T KOG2287|consen  173 KTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLNDPSSDLYYGRVIQNAPPIRDK------TSKWYVPESEYP  246 (349)
T ss_pred             HHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccCCCCcceEEEeecccCCCCCCC------CCCCccCHHHCC
Confidence             234445555544 489999999999999888888777664456778888655531111000      000000001111


Q ss_pred             hCCCccccccchhhcchHHHHHhhhccc--CCCcccchHHHHHHHHc-CCceEEeee
Q 026146          158 LWPGVSDLTGSFRLYKKSVLEDVISSCV--SKGYVFQMEMIVRACRK-GYHIEEVPI  211 (242)
Q Consensus       158 ~~~~~~~~~g~~~~~rr~~~~~~~~~~~--~~~~~~d~~~~~~~~~~-g~~i~~~p~  211 (242)
                      ...-.....|++.++++++.+.+.....  .....||.-+..-+.+. |.+-...+.
T Consensus       247 ~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~g~~l~~~~gi~~~~~~~  303 (349)
T KOG2287|consen  247 CSVYPPYASGPGYVISGDAARRLLKASKHLKFFPIEDVFVGGCLAEDLGIKPVNHPG  303 (349)
T ss_pred             CCCCCCcCCCceeEecHHHHHHHHHHhcCCCccchHHHHHHHHHHHhcCCCcccCcc
Confidence            1122445678888999999999855433  22335788888777766 766555553

>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2

Probab=93.51  E-value=2.4  Score=31.81  Aligned_cols=104  Identities=15%  Similarity=0.112  Sum_probs=63.8

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC-----CCcEEEeeCCCCcchHHHHHHHH
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG-----EDRILLRPRPKKLGLGTAYIHGL   88 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~-----~~~~~~~~~~~~~g~~~a~n~g~   88 (242)
                      .+|.-|. ..+..+++.+.+.   .--+|+||-+..   ..+.++++.+..+     ...+.+.......|.+.++..+.
T Consensus        25 Llpv~g~-pli~~~l~~l~~~---g~~~iivv~~~~---~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~gt~~al~~~~   97 (214)
T cd04198          25 LLPVANK-PMIWYPLDWLEKA---GFEDVIVVVPEE---EQAEISTYLRSFPLNLKQKLDEVTIVLDEDMGTADSLRHIR   97 (214)
T ss_pred             cCEECCe-eHHHHHHHHHHHC---CCCeEEEEECHH---HHHHHHHHHHhcccccCcceeEEEecCCCCcChHHHHHHHH
Confidence            4555554 7888899988764   223677776531   1233444333221     12344444566789999999988


Q ss_pred             hhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           89 KHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        89 ~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      +....+ ++++.+|.+ .+.-+..+++...+.+..+..
T Consensus        98 ~~i~~d-~lv~~~D~i-~~~~l~~~l~~h~~~~~~~t~  133 (214)
T cd04198          98 KKIKKD-FLVLSCDLI-TDLPLIELVDLHRSHDASLTV  133 (214)
T ss_pred             hhcCCC-EEEEeCccc-cccCHHHHHHHHhccCCcEEE
Confidence            877555 778888854 445677888877665555544

N-terminal domain of gamma subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit gamma shares sequence similarity with epsilon subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.

>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=93.46  E-value=0.85  Score=38.67  Aligned_cols=98  Identities=18%  Similarity=0.144  Sum_probs=62.5

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--   92 (242)
                      +|.-+. ..+..+++++.+.-   -.+++++-....    +.++++..    ..+.++..+...|.+.+...+++...  
T Consensus        25 l~i~Gk-pli~~~l~~l~~~g---i~~iivvv~~~~----~~i~~~~~----~~~~~~~~~~~~g~~~al~~a~~~l~~~   92 (458)
T PRK14354         25 HKVCGK-PMVEHVVDSVKKAG---IDKIVTVVGHGA----EEVKEVLG----DRSEFALQEEQLGTGHAVMQAEEFLADK   92 (458)
T ss_pred             CEeCCc-cHHHHHHHHHHhCC---CCeEEEEeCCCH----HHHHHHhc----CCcEEEEcCCCCCHHHHHHHHHHHhccc
Confidence            344454 77788888886542   225555533221    22333321    12445555556788888888887754  


Q ss_pred             CCEEEEEeCCC-CCCCCChHHHHHHHHhcCCcE
Q 026146           93 GSFVVIMDADL-SHHPKYLPSFIKKQLETGASI  124 (242)
Q Consensus        93 ~d~i~~lD~D~-~~~~~~l~~l~~~~~~~~~~~  124 (242)
                      .++++++++|. .+++..++++++.+++.+.++
T Consensus        93 ~d~vlv~~~D~p~i~~~~l~~li~~~~~~~~~~  125 (458)
T PRK14354         93 EGTTLVICGDTPLITAETLKNLIDFHEEHKAAA  125 (458)
T ss_pred             CCeEEEEECCccccCHHHHHHHHHHHHhcCCce
Confidence            47899999998 578889999998886655554

>TIGR00454 conserved hypothetical protein TIGR00454

Probab=93.41  E-value=0.78  Score=33.67  Aligned_cols=92  Identities=13%  Similarity=0.071  Sum_probs=60.8

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-CCCEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-SGSFVV   97 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-~~d~i~   97 (242)
                      +....+...++.+.+..   .-+++|+-+..++.+...+++.       ...+.. ....|...+...|++.. ..+.++
T Consensus        25 ~GkplI~~vi~~l~~~~---i~~I~Vv~~~~~~~~~~~l~~~-------~~~~~~-~~g~G~~~~l~~al~~~~~~~~~l   93 (183)
T TIGR00454        25 CGRCLIDHVLSPLLKSK---VNNIIIATSPHTPKTEEYINSA-------YKDYKN-ASGKGYIEDLNECIGELYFSEPFL   93 (183)
T ss_pred             CCEEHHHHHHHHHHhCC---CCEEEEEeCCCHHHHHHHHhhc-------CcEEEe-cCCCCHHHHHHHHhhcccCCCCEE
Confidence            34577888888886542   2256666554344444444321       122332 45568888999999863 367899


Q ss_pred             EEeCCCC-CCCCChHHHHHHHHhcC
Q 026146           98 IMDADLS-HHPKYLPSFIKKQLETG  121 (242)
Q Consensus        98 ~lD~D~~-~~~~~l~~l~~~~~~~~  121 (242)
                      ++-+|.. +.+..+..+++.+...+
T Consensus        94 v~~~D~P~i~~~~i~~li~~~~~~~  118 (183)
T TIGR00454        94 VVSSDLINLRSKIIDSIVDYYYCIK  118 (183)
T ss_pred             EEeCCcCcCCHHHHHHHHHHHHhcC
Confidence            9999987 78999999999886543

At this time this gene appears to be present only in Archea

>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC

Probab=93.33  E-value=0.3  Score=36.10  Aligned_cols=59  Identities=27%  Similarity=0.355  Sum_probs=43.7

Q ss_pred             cEEEeeCCCCcchHHHHHHHHhhcC--CCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEE
Q 026146           68 RILLRPRPKKLGLGTAYIHGLKHAS--GSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTR  129 (242)
Q Consensus        68 ~~~~~~~~~~~g~~~a~n~g~~~a~--~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~  129 (242)
                      .+.++..+. .|...++..|++...  ++.++++-+|.- ++++.++++++.++.  .+.++++.
T Consensus        65 ~v~~i~~~~-~G~~~si~~al~~~~~~~~~vlv~~~D~P~l~~~~i~~l~~~~~~--~~~vi~p~  126 (195)
T TIGR03552        65 GAPVLRDPG-PGLNNALNAALAEAREPGGAVLILMADLPLLTPRELKRLLAAATE--GDVVIAPD  126 (195)
T ss_pred             CCEEEecCC-CCHHHHHHHHHHHhhccCCeEEEEeCCCCCCCHHHHHHHHHhccc--CCEEEEec
Confidence            356666554 489999999998754  468999999988 789999999987743  34444443

Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis.

>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline

Probab=93.24  E-value=1.1  Score=33.87  Aligned_cols=89  Identities=11%  Similarity=0.141  Sum_probs=55.9

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC--CcchHHHHHHHHhhcC
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK--KLGLGTAYIHGLKHAS   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~--~~g~~~a~n~g~~~a~   92 (242)
                      +|.-+ ...+...++++.+.   .--+|+||-...    .+.++++....  ..+.++..+.  ..|.+.+...|+... 
T Consensus        24 ~~~~g-~~li~~~l~~l~~~---gi~~i~vv~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~s~~~~~~~~-   92 (229)
T cd02523          24 LEING-KPLLERQIETLKEA---GIDDIVIVTGYK----KEQIEELLKKY--PNIKFVYNPDYAETNNIYSLYLARDFL-   92 (229)
T ss_pred             eeECC-EEHHHHHHHHHHHC---CCceEEEEeccC----HHHHHHHHhcc--CCeEEEeCcchhhhCcHHHHHHHHHHc-
Confidence            34333 47788888888765   223667765532    22233333322  2466665443  478888999998887 


Q ss_pred             CCEEEEEeCCCCCCCCChHHHH
Q 026146           93 GSFVVIMDADLSHHPKYLPSFI  114 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~  114 (242)
                      .+.++++.+|..++++.++.++
T Consensus        93 ~~~~lv~~~D~~~~~~~~~~~~  114 (229)
T cd02523          93 DEDFLLLEGDVVFDPSILERLL  114 (229)
T ss_pred             CCCEEEEeCCEecCHHHHHHHH
Confidence            6789999999988775544443

This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP

>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=92.82  E-value=1.1  Score=37.87  Aligned_cols=101  Identities=18%  Similarity=0.156  Sum_probs=67.1

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-   92 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-   92 (242)
                      ++|.-+. ..+..+++++.+..    -+++|+-+..    .+.+.++...    .+.++..+...|.+.+...+++... 
T Consensus        22 l~~v~gk-pli~~~l~~l~~~~----~~i~vv~~~~----~~~i~~~~~~----~~~~~~~~~~~g~~~ai~~a~~~l~~   88 (448)
T PRK14357         22 LHKISGK-PMINWVIDTAKKVA----QKVGVVLGHE----AELVKKLLPE----WVKIFLQEEQLGTAHAVMCARDFIEP   88 (448)
T ss_pred             eeEECCe-eHHHHHHHHHHhcC----CcEEEEeCCC----HHHHHHhccc----ccEEEecCCCCChHHHHHHHHHhcCc
Confidence            4555554 78888999887642    2566664421    1333433221    2445555556788888888888764 


Q ss_pred             CCEEEEEeCCC-CCCCCChHHHHHHHHhcCCcEEEE
Q 026146           93 GSFVVIMDADL-SHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        93 ~d~i~~lD~D~-~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      .++++++++|. .+.+..++++++.+++.+.++.+.
T Consensus        89 ~~~vlv~~gD~p~i~~~~i~~l~~~~~~~~~d~ti~  124 (448)
T PRK14357         89 GDDLLILYGDVPLISENTLKRLIEEHNRKGADVTIL  124 (448)
T ss_pred             CCeEEEEeCCcccCCHHHHHHHHHHHHhcCCeEEEE
Confidence            58999999997 467778899998887666666544

>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional

Probab=92.77  E-value=2  Score=32.63  Aligned_cols=98  Identities=11%  Similarity=0.107  Sum_probs=59.0

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCC--CcEEEeeCCCCcchHHHHHHHHhhcC-CCE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE--DRILLRPRPKKLGLGTAYIHGLKHAS-GSF   95 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~--~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~   95 (242)
                      +....+..+++.+....  ..-+++||-+.   +....++++...++.  .++.++...  .+...+.-.|++... .++
T Consensus        28 ~gkpll~~~i~~~~~~~--~~~~ivVv~~~---~~~~~~~~~~~~~~~~~~~~~~v~~g--~~r~~sv~~gl~~~~~~d~  100 (230)
T PRK13385         28 VGEPIFIHALRPFLADN--RCSKIIIVTQA---QERKHVQDLMKQLNVADQRVEVVKGG--TERQESVAAGLDRIGNEDV  100 (230)
T ss_pred             CCeEHHHHHHHHHHcCC--CCCEEEEEeCh---hhHHHHHHHHHhcCcCCCceEEcCCC--chHHHHHHHHHHhccCCCe
Confidence            34566777888776532  12256666543   222333333333221  134444322  245678888887763 578


Q ss_pred             EEEEeCCCC-CCCCChHHHHHHHHhcCCc
Q 026146           96 VVIMDADLS-HHPKYLPSFIKKQLETGAS  123 (242)
Q Consensus        96 i~~lD~D~~-~~~~~l~~l~~~~~~~~~~  123 (242)
                      ++++|+|.- ++++.++++++.+.+.+..
T Consensus       101 vli~~~d~P~i~~~~i~~li~~~~~~~~~  129 (230)
T PRK13385        101 ILVHDGARPFLTQDIIDRLLEGVAKYGAA  129 (230)
T ss_pred             EEEccCCCCCCCHHHHHHHHHHHhhCCcE
Confidence            999999987 8899999999988764433

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=92.73  E-value=2.7  Score=31.13  Aligned_cols=100  Identities=16%  Similarity=0.188  Sum_probs=57.0

Q ss_pred             CccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc--CC-
Q 026146           17 TYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA--SG-   93 (242)
Q Consensus        17 ~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a--~~-   93 (242)
                      .-++.++.....+.+....  .++|++=--||.+....+....+............-.++..|-..+.-.+++..  ++ 
T Consensus         9 L~~~~~Rr~~~~~~~~~~~--~~~e~~~Avdg~~l~~~~~~~~~~~~~~~~~~~~~lt~gEiGC~lSH~~~w~~~v~~~~   86 (200)
T PF01755_consen    9 LDRSTERRERIQQQLAKLG--INFEFFDAVDGRDLSEDELFRRYDPELFKKRYGRPLTPGEIGCALSHIKAWQRIVDSGL   86 (200)
T ss_pred             CCCCHHHHHHHHHHHHHcC--CceEEEEeecccccchHHHHHHhhhhhhhccccccCCcceEeehhhHHHHHHHHHHcCC
Confidence            3344455555555555442  578888777877655433333332111100111111344567666666667664  34 


Q ss_pred             CEEEEEeCCCCCCCCChHHHHHHHH
Q 026146           94 SFVVIMDADLSHHPKYLPSFIKKQL  118 (242)
Q Consensus        94 d~i~~lD~D~~~~~~~l~~l~~~~~  118 (242)
                      ++++++.||..+.+++.+.+-....
T Consensus        87 ~~~lIlEDDv~~~~~f~~~l~~~~~  111 (200)
T PF01755_consen   87 EYALILEDDVIFDPDFKEFLEEILS  111 (200)
T ss_pred             CeEEEEeccccccccHHHHHHHHHh
Confidence            9999999999999987666555444

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis

Probab=92.69  E-value=3.5  Score=32.58  Aligned_cols=105  Identities=10%  Similarity=0.066  Sum_probs=64.3

Q ss_pred             cEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC---CC------cch
Q 026146           10 KYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP---KK------LGL   80 (242)
Q Consensus        10 ~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~---~~------~g~   80 (242)
                      .++|+....|-...+..++.|+.... ...+.+.|++++.+++..+.+.+..... +..+.++..+   ..      ...
T Consensus         2 ~~~iv~~~~~y~~~~~~~i~Sil~n~-~~~~~fhii~d~~s~~~~~~l~~~~~~~-~~~i~f~~i~~~~~~~~~~~~~~~   79 (280)
T cd06431           2 HVAIVCAGYNASRDVVTLVKSVLFYR-RNPLHFHLITDEIARRILATLFQTWMVP-AVEVSFYNAEELKSRVSWIPNKHY   79 (280)
T ss_pred             EEEEEEccCCcHHHHHHHHHHHHHcC-CCCEEEEEEECCcCHHHHHHHHHhcccc-CcEEEEEEhHHhhhhhccCcccch
Confidence            47788888665677888999998874 3568999999987666655555443332 2456555532   11      111


Q ss_pred             HHH----HHHHHhhc--CCCEEEEEeCCCCCCCCChHHHHHHH
Q 026146           81 GTA----YIHGLKHA--SGSFVVIMDADLSHHPKYLPSFIKKQ  117 (242)
Q Consensus        81 ~~a----~n~g~~~a--~~d~i~~lD~D~~~~~~~l~~l~~~~  117 (242)
                      +..    |-..-+.-  ..+-++.||+|.++. +-+.+|.+.+
T Consensus        80 s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~-~di~eL~~~~  121 (280)
T cd06431          80 SGIYGLMKLVLTEALPSDLEKVIVLDTDITFA-TDIAELWKIF  121 (280)
T ss_pred             hhHHHHHHHHHHHhchhhcCEEEEEcCCEEEc-CCHHHHHHHh
Confidence            111    22222222  368999999997765 4466666654

The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil

>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=92.54  E-value=0.26  Score=41.54  Aligned_cols=112  Identities=13%  Similarity=0.049  Sum_probs=72.9

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCC-CCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGS-PDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s-~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      .+..++.++-||++-+.|.+.+..+.+-.  .--+|+||=|.- .....+.++...    ...+++...++|  .-.+|-
T Consensus       441 ~~qgFTlim~TYdR~d~L~k~v~~ys~vP--sL~kIlVVWNnq~k~PP~es~~~~~----~VPlr~r~qkeN--sLnNRF  512 (691)
T KOG1022|consen  441 HSQGFTLIMLTYDRVDLLKKLVKHYSRVP--SLKKILVVWNNQGKNPPPESLEPDI----AVPLRFRQQKEN--SLNNRF  512 (691)
T ss_pred             cccceeeeeehHHHHHHHHHHHHHHhhCC--CcceEEEEecCCCCCCChhhccccC----CccEEEEehhhh--hhhccc
Confidence            34679999999999888888888775442  223566665532 222223333221    135777666665  223333


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      .-+...+++.|+-+|+|++++-+-|+--.+.-++.+..+|.
T Consensus       513 ~~~peieT~AVL~IDDDIim~~ddldFgf~VWrefPD~lVG  553 (691)
T KOG1022|consen  513 EPYPEIETEAVLEIDDDIIMPCDDLDFGFEVWREFPDRLVG  553 (691)
T ss_pred             ccCcccccceeEEecCceeeecchhHHHHHHHHhCccceec
Confidence            44455679999999999998888888888877776655554

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals

Probab=92.50  E-value=0.079  Score=46.55  Aligned_cols=55  Identities=16%  Similarity=0.233  Sum_probs=44.3

Q ss_pred             CcEEEeeCCCCcc-----hHHHHHHHHhhc----CCCEEEEEeCCCC-CCCCChHHHHHHHHhcC
Q 026146           67 DRILLRPRPKKLG-----LGTAYIHGLKHA----SGSFVVIMDADLS-HHPKYLPSFIKKQLETG  121 (242)
Q Consensus        67 ~~~~~~~~~~~~g-----~~~a~n~g~~~a----~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~  121 (242)
                      +.+.|+.++++.|     |++|+|..++-+    .++||+-+|.|-. -++..+.+.+-.+.+..
T Consensus       166 P~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~  230 (720)
T PF03552_consen  166 PMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPK  230 (720)
T ss_pred             CeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCC
Confidence            4788888777766     788999887654    5899999999986 56889999998887643

The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane

>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form

Probab=92.50  E-value=1.9  Score=35.22  Aligned_cols=183  Identities=14%  Similarity=0.089  Sum_probs=94.4

Q ss_pred             eCccccccHHHHHHHHHhhhcCCCeEEEEEeCC-CCCChHHHHHHHHHHh--CCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           16 PTYNERLNIALIVYLIFKHLRDVDFEIIVVDDG-SPDGTQEVVKQLQQLY--GEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        16 p~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~-s~d~t~~~l~~~~~~~--~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      |.-+. ..+..+++++.+.   .--+++++-.. ..    +.++++....  -+..+.++..+...|.+.+.-.++....
T Consensus        26 pv~g~-pli~~~l~~l~~~---gi~~i~vv~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~G~~~al~~a~~~l~   97 (353)
T TIGR01208        26 PVANK-PILQYAIEDLAEA---GITDIGIVVGPVTG----EEIKEIVGEGERFGAKITYIVQGEPLGLAHAVYTARDFLG   97 (353)
T ss_pred             EECCE-eHHHHHHHHHHHC---CCCEEEEEeCCCCH----HHHHHHHhcccccCceEEEEECCCCCCHHHHHHHHHHhcC
Confidence            44454 7788888888764   22356666543 22    2233332211  1224566665666788999999988775


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhC---CCccccccch
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLW---PGVSDLTGSF  169 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~  169 (242)
                      .+-++++.+|..++ ..+..+++.+.+.+.++.+......+...  +.....  . ....+......   ..-.....|.
T Consensus        98 ~~~~li~~gD~~~~-~~l~~l~~~~~~~~~d~ti~~~~~~~~~~--~g~~~~--~-~~~~v~~~~ekp~~~~~~~~~~Gi  171 (353)
T TIGR01208        98 DDDFVVYLGDNLIQ-DGISRFVKSFEEKDYDALILLTKVRDPTA--FGVAVL--E-DGKRILKLVEKPKEPPSNLAVVGL  171 (353)
T ss_pred             CCCEEEEECCeecC-ccHHHHHHHHHhcCCCcEEEEEECCChhh--CeEEEE--c-CCCcEEEEEECCCCCCccceEEEE
Confidence            54566778998775 56788888777666665443322111110  000000  0 00000000000   0011234566


Q ss_pred             hhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEeeee
Q 026146          170 RLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVPIT  212 (242)
Q Consensus       170 ~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p~~  212 (242)
                      +++++.+++.+-.... .....+-.++...+...|.++...+..
T Consensus       172 y~~~~~l~~~l~~~~~~~~~e~~l~d~l~~l~~~g~~v~~~~~~  215 (353)
T TIGR01208       172 YMFRPLIFEAIKNIKPSWRGELEITDAIQWLIEKGYKVGGSKVT  215 (353)
T ss_pred             EEECHHHHHHHHhcCCCCCCcEEHHHHHHHHHHcCCeEEEEEeC
Confidence            7899977766521111 111111245667777888887766543

Alternate name: dTDP-D-glucose synthase

>PRK10122 GalU regulator GalF; Provisional

Probab=92.19  E-value=5  Score=31.98  Aligned_cols=108  Identities=24%  Similarity=0.307  Sum_probs=65.2

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHH-------------------HHHHHh-CCCcEEEee
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVK-------------------QLQQLY-GEDRILLRP   73 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~-------------------~~~~~~-~~~~~~~~~   73 (242)
                      .+|.-++ +.|...++++.+.   .--+|+|+-.-..+...+.+.                   .+.... ++.++.++.
T Consensus        28 llpi~gk-piI~~~l~~l~~~---Gi~~i~iv~~~~~~~i~~~~~~~~~l~~~~~~~~k~~~l~~~~~~~~~~~~i~~~~  103 (297)
T PRK10122         28 MLPIVDK-PMIQYIVDEIVAA---GIKEIVLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVR  103 (297)
T ss_pred             eeEECCE-EHHHHHHHHHHHC---CCCEEEEEcCCChHHHHHHHhcchhHHHHHhhcchhhhHHhhhhccCCCceEEEee
Confidence            4555565 7888888888765   223666664432221111111                   000100 223567777


Q ss_pred             CCCCcchHHHHHHHHhhcC-CCEEEEEeCCCCCCCC-------ChHHHHHHHHhcCCcEEE
Q 026146           74 RPKKLGLGTAYIHGLKHAS-GSFVVIMDADLSHHPK-------YLPSFIKKQLETGASIVT  126 (242)
Q Consensus        74 ~~~~~g~~~a~n~g~~~a~-~d~i~~lD~D~~~~~~-------~l~~l~~~~~~~~~~~v~  126 (242)
                      .++..|.+.|.-.+..... .++++++ +|..++++       .+..+++...+.+.+++.
T Consensus       104 q~~~lGtg~al~~a~~~l~~~~fvvi~-gD~l~~~~~~~~~~~dl~~li~~h~~~~~~~~~  163 (297)
T PRK10122        104 QGQPLGLGHSILCARPAIGDNPFVVVL-PDVVIDDASADPLRYNLAAMIARFNETGRSQVL  163 (297)
T ss_pred             cCCcCchHHHHHHHHHHcCCCCEEEEE-CCeeccCccccccchhHHHHHHHHHHhCCcEEE
Confidence            7778999999999988864 4566555 88777543       478888877666655443

>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=92.00  E-value=0.67  Score=39.27  Aligned_cols=89  Identities=11%  Similarity=0.132  Sum_probs=57.1

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC---CCEE
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS---GSFV   96 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~---~d~i   96 (242)
                      ....+..+++.+.+.   ..-++++|-.-.    .+.++++..   ...+.++..+...|.+.+...+++...   .+++
T Consensus        32 gkpli~~~l~~l~~~---~~~~iivv~~~~----~~~i~~~~~---~~~~~~v~~~~~~Gt~~al~~a~~~l~~~~~d~v  101 (456)
T PRK14356         32 GEPMLRFVYRALRPL---FGDNVWTVVGHR----ADMVRAAFP---DEDARFVLQEQQLGTGHALQCAWPSLTAAGLDRV  101 (456)
T ss_pred             CCcHHHHHHHHHHhc---CCCcEEEEECCC----HHHHHHhcc---ccCceEEEcCCCCCcHHHHHHHHHHHhhcCCCcE
Confidence            346667777777554   122566654422    222333322   224666666666788888888876653   5899


Q ss_pred             EEEeCCC-CCCCCChHHHHHHHH
Q 026146           97 VIMDADL-SHHPKYLPSFIKKQL  118 (242)
Q Consensus        97 ~~lD~D~-~~~~~~l~~l~~~~~  118 (242)
                      +++++|. .++++.++.+++...
T Consensus       102 lv~~gD~P~i~~~~i~~li~~~~  124 (456)
T PRK14356        102 LVVNGDTPLVTTDTIDDFLKEAA  124 (456)
T ss_pred             EEEeCCcccCCHHHHHHHHHHHh
Confidence            9999998 478888999888764

>PLN02436 cellulose synthase A

Probab=91.70  E-value=0.13  Score=47.19  Aligned_cols=53  Identities=17%  Similarity=0.253  Sum_probs=42.2

Q ss_pred             cEEEeeCCCCcc-----hHHHHHHHHhhc----CCCEEEEEeCCCC-CCCCChHHHHHHHHhc
Q 026146           68 RILLRPRPKKLG-----LGTAYIHGLKHA----SGSFVVIMDADLS-HHPKYLPSFIKKQLET  120 (242)
Q Consensus        68 ~~~~~~~~~~~g-----~~~a~n~g~~~a----~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~  120 (242)
                      .+.|+.++++.|     |++|+|..++-+    .++||+-+|.|-. -++..+...+-.+.+.
T Consensus       533 ~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~  595 (1094)
T PLN02436        533 RLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDP  595 (1094)
T ss_pred             eEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCC
Confidence            466666665555     899999999865    5899999999986 5688999999888754

>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=91.40  E-value=0.75  Score=37.96  Aligned_cols=105  Identities=10%  Similarity=0.043  Sum_probs=61.2

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC-------CCcEEEe----eCCC---Ccc
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG-------EDRILLR----PRPK---KLG   79 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~-------~~~~~~~----~~~~---~~g   79 (242)
                      .+|.-+....|...|+.|.+.   .--+|+|+-.--.    +.++++.+...       ...+.++    ...+   ..|
T Consensus        28 llpv~gk~pli~~~l~~l~~~---Gi~~i~iv~~~~~----~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~G  100 (380)
T PRK05293         28 AVPFGGKYRIIDFTLSNCANS---GIDTVGVLTQYQP----LELNNHIGIGSPWDLDRINGGVTILPPYSESEGGKWYKG  100 (380)
T ss_pred             eeeeCCceeehhHHHHHHHhC---CCCEEEEEecCCH----HHHHHHHhCCCcccccCCCCCEEEeCCcccCCCCcccCC
Confidence            456656546788889988764   2226777654322    22333322110       0113332    2222   268


Q ss_pred             hHHHHHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           80 LGTAYIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        80 ~~~a~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      -+.|+..+.....   .+.++++.+|.+.+. .+..+++...+.+.++.+
T Consensus       101 ta~al~~a~~~l~~~~~~~~lV~~gD~l~~~-d~~~ll~~h~~~~~~~tl  149 (380)
T PRK05293        101 TAHAIYQNIDYIDQYDPEYVLILSGDHIYKM-DYDKMLDYHKEKEADVTI  149 (380)
T ss_pred             cHHHHHHHHHHHHhCCCCEEEEecCCEEEcC-CHHHHHHHHHhcCCCEEE
Confidence            8888888887754   478999999987655 456677766555665433

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis

Probab=91.38  E-value=3.5  Score=31.74  Aligned_cols=96  Identities=13%  Similarity=0.109  Sum_probs=59.7

Q ss_pred             ccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCc-----------c-hHHHHH
Q 026146           18 YNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKL-----------G-LGTAYI   85 (242)
Q Consensus        18 ~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~-----------g-~~~a~n   85 (242)
                      .|-...+.-++.||.+.... .+.++|++++-+++..+.++++...+ +..+.++..+...           . .+..+-
T Consensus        10 ~~y~~~~~v~i~Sl~~~~~~-~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL   87 (246)
T cd00505          10 DEYLRGAIVLMKSVLRHRTK-PLRFHVLTNPLSDTFKAALDNLRKLY-NFNYELIPVDILDSVDSEHLKRPIKIVTLTKL   87 (246)
T ss_pred             cchhHHHHHHHHHHHHhCCC-CeEEEEEEccccHHHHHHHHHHHhcc-CceEEEEeccccCcchhhhhcCccccceeHHH
Confidence            34556677888998887543 78999999987777777787765433 2345555432110           0 111222


Q ss_pred             HHHhhcC-CCEEEEEeCCCCCCCCChHHHHHH
Q 026146           86 HGLKHAS-GSFVVIMDADLSHHPKYLPSFIKK  116 (242)
Q Consensus        86 ~g~~~a~-~d~i~~lD~D~~~~~~~l~~l~~~  116 (242)
                      ...+... .+-+++||+|.++. +-+..+...
T Consensus        88 ~i~~llp~~~kvlYLD~D~iv~-~di~~L~~~  118 (246)
T cd00505          88 HLPNLVPDYDKILYVDADILVL-TDIDELWDT  118 (246)
T ss_pred             HHHHHhhccCeEEEEcCCeeec-cCHHHHhhc
Confidence            2323333 68899999998876 556666654

Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

>PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional

Probab=91.38  E-value=6.3  Score=31.50  Aligned_cols=109  Identities=19%  Similarity=0.196  Sum_probs=63.1

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHH---HH------------HH-----hCCCcEEEee
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQ---LQ------------QL-----YGEDRILLRP   73 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~---~~------------~~-----~~~~~~~~~~   73 (242)
                      .+|.-++ ..+..+++++.+.   .--+|+|+-+-..+...+.+..   +.            .+     .+...+.+..
T Consensus        33 l~pv~g~-pii~~~l~~l~~~---gi~~i~vv~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~e~~~i~~~~~~i~~~~  108 (302)
T PRK13389         33 MLPLVDK-PLIQYVVNECIAA---GITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVR  108 (302)
T ss_pred             eeEECCE-EHHHHHHHHHHHC---CCCEEEEEeCCCHHHHHHHHccchhhhhhhhhhhhhHHHHhhhhccccCceEEEee
Confidence            4455554 7788888888765   2236666655433322222221   00            00     0112344444


Q ss_pred             CCCCcchHHHHHHHHhhcCCCEEEEEeCCCCCC-------CCChHHHHHHHHhcCCcEEE
Q 026146           74 RPKKLGLGTAYIHGLKHASGSFVVIMDADLSHH-------PKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        74 ~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~-------~~~l~~l~~~~~~~~~~~v~  126 (242)
                      .....|.+.|.-.+......+-++++.+|..++       ...+..+++.+.+.+.+.+.
T Consensus       109 q~~~~Gtg~Av~~a~~~~~~~~~lVl~gD~~~~~~~~~~~~~dl~~l~~~h~~~~~~tl~  168 (302)
T PRK13389        109 QGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIM  168 (302)
T ss_pred             cCCCCChHHHHHHHHHHcCCCCEEEEeCcceecccccccccccHHHHHHHHHhcCCCEEE
Confidence            455678888888887775545567777887764       36788888877665555433

>PF07507 WavE: WavE lipopolysaccharide synthesis; InterPro: IPR011122 These proteins are encoded by putative wav gene clusters, which are responsible for the synthesis of the core oligosaccharide (OS) region of Vibrio cholerae lipopolysaccharide []

Probab=91.24  E-value=0.73  Score=36.81  Aligned_cols=97  Identities=19%  Similarity=0.110  Sum_probs=57.3

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHH--HH-HHHhCCCcEEEeeCCCCcc------hHHHHHHHHh
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVK--QL-QQLYGEDRILLRPRPKKLG------LGTAYIHGLK   89 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~--~~-~~~~~~~~~~~~~~~~~~g------~~~a~n~g~~   89 (242)
                      .++....+|++++.+..  |..+||+--=...|-  +.+.  ++ ..+.|+..+.........+      .-.+-..|++
T Consensus        17 ~~~~~t~~~l~siR~~~--P~A~IILSTW~~~d~--~~l~~D~vv~s~DPG~~~~~~~~~~~~~~~NiNrQi~St~aGL~   92 (311)
T PF07507_consen   17 QEPDITKNCLASIRKHF--PGAEIILSTWEGQDI--SGLDYDQVVISDDPGSNVVLYKKDGKPGPNNINRQIVSTLAGLK   92 (311)
T ss_pred             ccchhHHHHHHHHHHhC--CCCEEEEECCCCCCc--ccCCcceEEecCCCCcceeeccCCCCCcccchhHHHHHHHHHHH
Confidence            35566789999998876  677888753322221  1111  11 1223443433232222212      2334448999


Q ss_pred             hcCCCEEEEEeCCCCCCCCChHHHHHHHHh
Q 026146           90 HASGSFVVIMDADLSHHPKYLPSFIKKQLE  119 (242)
Q Consensus        90 ~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~  119 (242)
                      +|+.+|++=+-+|..+..+.+-++.+.+.+
T Consensus        93 ~~~~~Ya~KlRtD~~l~~~~~l~~~~~~~~  122 (311)
T PF07507_consen   93 AAKTKYAMKLRTDNRLTGNNFLDLYEKYPD  122 (311)
T ss_pred             HhCCceEEEEcccccccchHHHHHHHHhcc
Confidence            999999999999999776666666665543

>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

Probab=91.22  E-value=3.4  Score=30.96  Aligned_cols=94  Identities=16%  Similarity=0.134  Sum_probs=59.0

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-CCCEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-SGSFVV   97 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-~~d~i~   97 (242)
                      +....+..+++.+.+..  ..-+++|+-+..   ..+.+.+.....  ..+.++....  +...+...|++.. ..|+++
T Consensus        25 ~gkpll~~~l~~l~~~~--~~~~ivVv~~~~---~~~~~~~~~~~~--~~~~~~~~~~--~~~~sl~~~l~~~~~~d~vl   95 (217)
T TIGR00453        25 GGRPLLEHTLDAFLAHP--AIDEVVVVVSPE---DQEFFQKYLVAR--AVPKIVAGGD--TRQDSVRNGLKALKDAEWVL   95 (217)
T ss_pred             CCeEHHHHHHHHHhcCC--CCCEEEEEEChH---HHHHHHHHhhcC--CcEEEeCCCc--hHHHHHHHHHHhCCCCCEEE
Confidence            45677888888886531  123677775432   112232222111  1234443222  4567788888877 679999


Q ss_pred             EEeCCCC-CCCCChHHHHHHHHhcC
Q 026146           98 IMDADLS-HHPKYLPSFIKKQLETG  121 (242)
Q Consensus        98 ~lD~D~~-~~~~~l~~l~~~~~~~~  121 (242)
                      ++++|.- ++++.+..+++.+.+.+
T Consensus        96 v~~~D~P~i~~~~i~~li~~~~~~~  120 (217)
T TIGR00453        96 VHDAARPFVPKELLDRLLEALRKAG  120 (217)
T ss_pred             EccCccCCCCHHHHHHHHHHHhhCC
Confidence            9999986 89999999999886543

Members of this protein family are 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, the IspD protein of the deoxyxylulose pathway of IPP biosynthesis. In about twenty percent of bacterial genomes, this protein occurs as IspDF, a bifunctional fusion protein.

>PF09837 DUF2064: Uncharacterized protein conserved in bacteria (DUF2064); InterPro: IPR018641 This entry contains proteins that have no known function

Probab=90.92  E-value=2.6  Score=28.66  Aligned_cols=84  Identities=18%  Similarity=0.193  Sum_probs=47.8

Q ss_pred             CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc--CCCEEEEEeCCCC-CCCCChHHHH
Q 026146           38 VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA--SGSFVVIMDADLS-HHPKYLPSFI  114 (242)
Q Consensus        38 ~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a--~~d~i~~lD~D~~-~~~~~l~~l~  114 (242)
                      ...+++|.-++..+.....  +. ..  ...+.+.... ....+.-++.+++.+  ..+-++++-+|+. ++++.+.+..
T Consensus         9 ~~~~~~l~~~~~~~~~~~~--~~-~~--~~~~~~~~Q~-g~dLG~Rm~~a~~~~~~g~~~vvliGsD~P~l~~~~l~~A~   82 (122)
T PF09837_consen    9 DGADVVLAYTPDGDHAAFR--QL-WL--PSGFSFFPQQ-GGDLGERMANAFQQAARGYEPVVLIGSDCPDLTPDDLEQAF   82 (122)
T ss_dssp             SSSEEEEEE----TTHHHH--HH-HH---TTSEEEE---SSSHHHHHHHHHHHHHTT-SEEEEE-SS-TT--HHHHHHHH
T ss_pred             CCcCEEEEEcCCccHHHHh--cc-cc--CCCCEEeecC-CCCHHHHHHHHHHHHHcCCCcEEEEcCCCCCCCHHHHHHHH
Confidence            4567777777766543321  11 11  1245555543 345677777777776  4578999999998 8999999999


Q ss_pred             HHHHhcCCcEEEEEE
Q 026146          115 KKQLETGASIVTGTR  129 (242)
Q Consensus       115 ~~~~~~~~~~v~~~~  129 (242)
                      +.++.  .++|.|+.
T Consensus        83 ~~L~~--~d~VlgPa   95 (122)
T PF09837_consen   83 EALQR--HDVVLGPA   95 (122)
T ss_dssp             HHTTT---SEEEEEB
T ss_pred             HHhcc--CCEEEeec
Confidence            98854  47887753

; PDB: 3CGX_A.

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=90.87  E-value=2.6  Score=37.14  Aligned_cols=162  Identities=12%  Similarity=0.038  Sum_probs=81.6

Q ss_pred             eEEEEEeCCCCCCh-HHHHHHHHHHhCCCcEEEeeCCC---Ccc-hH-HHHHHHHhhcCCCEEEEEeCCCCCCCCChHHH
Q 026146           40 FEIIVVDDGSPDGT-QEVVKQLQQLYGEDRILLRPRPK---KLG-LG-TAYIHGLKHASGSFVVIMDADLSHHPKYLPSF  113 (242)
Q Consensus        40 ~eiivvd~~s~d~t-~~~l~~~~~~~~~~~~~~~~~~~---~~g-~~-~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l  113 (242)
                      +.+.++-.-+.++. ...+++=++.|.  .+.....-.   |.. |. ..+..+....+.+|++..|+|..+..+-|-+.
T Consensus       419 v~~rFvVG~s~n~~l~~~L~~Ea~~yg--DIIq~dF~DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll~~  496 (636)
T PLN03133        419 VAVRFFVGLHKNQMVNEELWNEARTYG--DIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLAS  496 (636)
T ss_pred             eEEEEEEecCCcHHHHHHHHHHHHHcC--CeEEEeeechhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHHHH
Confidence            44555554444433 334444444554  444444332   222 11 12334444456899999999999987755555


Q ss_pred             HHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchhhcchHHHHHhhhcc----cCCCc
Q 026146          114 IKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC----VSKGY  189 (242)
Q Consensus       114 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~----~~~~~  189 (242)
                      ++... ....+.+|.........+. +     .++++-....+....-.+...|++.++++++.+.+....    .....
T Consensus       497 L~~~~-~~~~Ly~G~v~~~~~PiRd-~-----~sKWYVs~~eyp~~~YPpYasG~gYVlS~Dla~~L~~~s~s~~l~~f~  569 (636)
T PLN03133        497 LKRTN-VSHGLLYGLINSDSQPHRN-P-----DSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGRLKMFK  569 (636)
T ss_pred             HHhcC-CCCceEEEEeccCCCcccC-C-----CCCCCCCHHHCCCCCCCCCCCcCEEEEcHHHHHHHHHhhhhcccCcCC
Confidence            54322 2335666654432111000 0     000000001111222244567888899999999983321    22333


Q ss_pred             ccchHHHHHHH---HcCCceEEee
Q 026146          190 VFQMEMIVRAC---RKGYHIEEVP  210 (242)
Q Consensus       190 ~~d~~~~~~~~---~~g~~i~~~p  210 (242)
                      .||.-+..-+.   ..|.++.+..
T Consensus       570 lEDVyvGi~l~~l~k~gl~v~~~~  593 (636)
T PLN03133        570 LEDVAMGIWIAEMKKEGLEVKYEN  593 (636)
T ss_pred             hhhHhHHHHHHHhcccCCCceeeC
Confidence            68877766543   4577766554

>PRK00576 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional

Probab=90.61  E-value=3.6  Score=29.88  Aligned_cols=89  Identities=15%  Similarity=0.160  Sum_probs=55.5

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhc---CCCEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHA---SGSFV   96 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a---~~d~i   96 (242)
                      ...++.+++.+...    .-+++|+-+....     ..       ...+.++... ...|...+.-.|++.+   +.+++
T Consensus        15 ~~ll~~~~~~l~~~----~~~iivv~~~~~~-----~~-------~~~~~~i~d~~~g~gpl~~~~~gl~~~~~~~~~~~   78 (178)
T PRK00576         15 TTLVEHVVGIVGQR----CAPVFVMAAPGQP-----LP-------ELPAPVLRDELRGLGPLPATGRGLRAAAEAGARLA   78 (178)
T ss_pred             cCHHHHHHHHHhhc----CCEEEEECCCCcc-----cc-------cCCCCEeccCCCCCCcHHHHHHHHHHHHhcCCCEE
Confidence            56678888876543    2367777553311     11       1123444422 2356667666667654   57999


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCcEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGASIV  125 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v  125 (242)
                      +++=+|.- ++++.++.++......+..++
T Consensus        79 lv~~~DmP~i~~~~i~~L~~~~~~~~~~~~  108 (178)
T PRK00576         79 FVCAVDMPYLTVELIDDLARPAAQTDAEVV  108 (178)
T ss_pred             EEEeCCCCCCCHHHHHHHHHHhhcCCCcEE
Confidence            99999988 789999999987655444444

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=90.38  E-value=3.8  Score=31.52  Aligned_cols=94  Identities=14%  Similarity=0.155  Sum_probs=57.9

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-----------Ccc-hHHHHHHH
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-----------KLG-LGTAYIHG   87 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-----------~~g-~~~a~n~g   87 (242)
                      -...+.-++.|+.+......+.++|+.++-++...+.++++.... ...+.++.-+.           ... ...++-..
T Consensus        11 y~~~~~~~l~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl~l   89 (248)
T cd04194          11 YAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKY-NSSIEFIKIDNDDFKFFPATTDHISYATYYRLLI   89 (248)
T ss_pred             hHHHHHHHHHHHHhcCCCCceEEEEEeCCCCHHHHHHHHHHHHhc-CCeEEEEEcCHHHHhcCCcccccccHHHHHHHHH
Confidence            345567788888776543478899999887777888888876642 23555554321           011 12223333


Q ss_pred             HhhcC-CCEEEEEeCCCCCCCCChHHHHH
Q 026146           88 LKHAS-GSFVVIMDADLSHHPKYLPSFIK  115 (242)
Q Consensus        88 ~~~a~-~d~i~~lD~D~~~~~~~l~~l~~  115 (242)
                      .+.-. .+.+++||+|.++-. -+..+..
T Consensus        90 ~~ll~~~~rvlylD~D~lv~~-di~~L~~  117 (248)
T cd04194          90 PDLLPDYDKVLYLDADIIVLG-DLSELFD  117 (248)
T ss_pred             HHHhcccCEEEEEeCCEEecC-CHHHHhc
Confidence            33333 788999999987655 4555554

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]

Probab=89.72  E-value=7.3  Score=29.54  Aligned_cols=184  Identities=14%  Similarity=0.162  Sum_probs=96.4

Q ss_pred             CcEEEEEeCcc--------------ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC
Q 026146            9 NKYSIIIPTYN--------------ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR   74 (242)
Q Consensus         9 ~~isiiip~~n--------------~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~   74 (242)
                      +++.||||++=              ....+..+.+...+.   .--+++|--|.     .++++ ....++ ..+..-..
T Consensus         2 ~~~~viIPAR~~STRLpgKPLadI~GkpmI~rV~e~a~~s---~~~rvvVATDd-----e~I~~-av~~~G-~~avmT~~   71 (247)
T COG1212           2 MKFVVIIPARLASTRLPGKPLADIGGKPMIVRVAERALKS---GADRVVVATDD-----ERIAE-AVQAFG-GEAVMTSK   71 (247)
T ss_pred             CceEEEEecchhcccCCCCchhhhCCchHHHHHHHHHHHc---CCCeEEEEcCC-----HHHHH-HHHHhC-CEEEecCC
Confidence            46889999962              123344444444333   22355655442     22222 223332 24444444


Q ss_pred             CCCcchHHHHHHHHhhc---CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCC---------------
Q 026146           75 PKKLGLGTAYIHGLKHA---SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGG---------------  135 (242)
Q Consensus        75 ~~~~g~~~a~n~g~~~a---~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~---------------  135 (242)
                      +.+.| ..=..++++..   +.++|+=+-+|.- ++|..+..+.+.+++.++++++........+               
T Consensus        72 ~h~SG-TdR~~Ev~~~l~~~~~~iIVNvQGDeP~i~p~~I~~~~~~L~~~~~~~aTl~~~i~~~ee~~nPN~VKvV~d~~  150 (247)
T COG1212          72 DHQSG-TDRLAEVVEKLGLPDDEIIVNVQGDEPFIEPEVIRAVAENLENSNADMATLAVKITDEEEAFNPNVVKVVLDKE  150 (247)
T ss_pred             CCCCc-cHHHHHHHHhcCCCcceEEEEccCCCCCCCHHHHHHHHHHHHhCCcceeeeeeecCCHHHhcCCCcEEEEEcCC
Confidence            43434 33444555554   4688999999977 7899999999999988888887533222111               


Q ss_pred             ccCchhhHHHHHhHHHHHHHHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHH--HHHHHcCCceEEee
Q 026146          136 VHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMI--VRACRKGYHIEEVP  210 (242)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~--~~~~~~g~~i~~~p  210 (242)
                      .....|.+....+..    .. .+.....-.=|.+.||++++++...+  .....|+.|-.  +|+...|.+|...-
T Consensus       151 g~ALYFSRs~iP~~r----d~-~~~~p~l~HIGIYayr~~~L~~f~~~--~ps~LE~~E~LEQLR~Le~G~kI~v~i  220 (247)
T COG1212         151 GYALYFSRAPIPYGR----DN-FGGTPFLRHIGIYAYRAGFLERFVAL--KPSPLEKIESLEQLRVLENGEKIHVEI  220 (247)
T ss_pred             CcEEEEEcCCCCCcc----cc-cCCcchhheeehHHhHHHHHHHHHhc--CCchhHHHHHHHHHHHHHcCCeeEEEE
Confidence            011111111110000    00 00000111124458999999998543  22333444433  67889999987653

>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]

Probab=89.65  E-value=1.1  Score=36.76  Aligned_cols=108  Identities=15%  Similarity=0.082  Sum_probs=69.8

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCC--cEEEeeCCCCc------c
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGED--RILLRPRPKKL------G   79 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~--~~~~~~~~~~~------g   79 (242)
                      |.+.+.+..+|-...++..+..+.++.++ ....|++-.|-+.|.+.++++++.++....  .|.+....+..      |
T Consensus         3 ptvl~alL~rn~ah~lp~Flg~le~~Dypk~r~aiw~~~dh~~d~~ie~freWL~nv~~~y~~V~~e~~~e~~s~~d~~~   82 (568)
T KOG4179|consen    3 PTVLCALLFRNFAHSLPLFLGELEEGDYPKIRPAIWIGVDHEHDHAIEYFREWLENVGDLYHRVKWEPFIEPKSYPDEHG   82 (568)
T ss_pred             ceeehHHHHHHHHhhhhhccCChhccCCcccccceEEecCccccchHHHHHHHHHhcCCccceeEEEecCCccccCcccC
Confidence            56777777888888888888888777665 345677777889999999999887764321  23332222111      1


Q ss_pred             ------h-----HHHHHHHHhhcC---CCEEEEEeCCCCCC-CCChHHHHHH
Q 026146           80 ------L-----GTAYIHGLKHAS---GSFVVIMDADLSHH-PKYLPSFIKK  116 (242)
Q Consensus        80 ------~-----~~a~n~g~~~a~---~d~i~~lD~D~~~~-~~~l~~l~~~  116 (242)
                            .     -.-..++++.++   .||++|.|.|+.+. ++.|..++..
T Consensus        83 pk~W~~sr~q~lm~lKeea~~~~r~~~adyilf~d~d~lLts~dTl~llm~l  134 (568)
T KOG4179|consen   83 PKHWPDSRFQHLMSLKEEALNWARSGWADYILFKDEDNLLTSGDTLPLLMNL  134 (568)
T ss_pred             CccCchHHHHHHHHHHHHHHHHHHhhhcceeEEeehhheeeCCchHhHHHhc
Confidence                  0     111233444443   69999999999954 5566665543

>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]

Probab=88.93  E-value=2.8  Score=32.68  Aligned_cols=104  Identities=22%  Similarity=0.249  Sum_probs=67.3

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCC-------ChH------------HHHHHHHHHhCCCcEEEeeCCCCcchH
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPD-------GTQ------------EVVKQLQQLYGEDRILLRPRPKKLGLG   81 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d-------~t~------------~~l~~~~~~~~~~~~~~~~~~~~~g~~   81 (242)
                      .+.++-.++...+.   .--+|++|-..+..       .+.            +.++.+.+.-+..++.+++.++..|.+
T Consensus        35 KP~IqYiVeEa~~a---GIe~i~iVTgr~K~~IeDhFD~s~ELE~~L~~~~K~~~L~~v~~i~~~~~i~~vRQ~e~~GLG  111 (291)
T COG1210          35 KPLIQYIVEEAVAA---GIEEILIVTGRGKRAIEDHFDTSYELENTLEKRGKRELLEEVRSIPPLVTISFVRQKEPLGLG  111 (291)
T ss_pred             chhHHHHHHHHHHc---CCCEEEEEecCCcchHHHhCcCcHHHHHHHHHhCHHHHHHHHHhcccCceEEEEecCCCCcch
Confidence            35566666665544   23367777665543       111            223333222234579999999999999


Q ss_pred             HHHHHHHhhcCCC-EEEEEeCCCCCC-CCChHHHHHHHHhcCCcEEEE
Q 026146           82 TAYIHGLKHASGS-FVVIMDADLSHH-PKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        82 ~a~n~g~~~a~~d-~i~~lD~D~~~~-~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      .|..+|=.....+ +.++|-+|...+ +..+.++++.+++.+..++..
T Consensus       112 hAVl~A~~~vg~EpFaVlL~Ddl~~~~~~~l~qmi~~ye~~g~svi~v  159 (291)
T COG1210         112 HAVLCAKPFVGDEPFAVLLPDDLVDSEKPCLKQMIELYEETGGSVIGV  159 (291)
T ss_pred             hHHHhhhhhcCCCceEEEeCCeeecCCchHHHHHHHHHHHhCCcEEEE
Confidence            9999999988776 555555555444 678999999998766655544

>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2

Probab=88.53  E-value=8.7  Score=28.84  Aligned_cols=97  Identities=13%  Similarity=0.075  Sum_probs=55.9

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC-------CCcEEEeeCCCCcchHHHHHH
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG-------EDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~-------~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      .+|.-|. ..|...|+++.+.   .--+|+|+-+...+.    ++++.+...       ...+.++..++..|.+.|...
T Consensus        25 llpi~g~-piI~~~l~~l~~~---Gi~~I~iv~~~~~~~----i~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~al~~   96 (217)
T cd04197          25 LLPLANV-PLIDYTLEFLALN---GVEEVFVFCCSHSDQ----IKEYIEKSKWSKPKSSLMIVIIIMSEDCRSLGDALRD   96 (217)
T ss_pred             eeEECCE-ehHHHHHHHHHHC---CCCeEEEEeCCCHHH----HHHHHhhccccccccCcceEEEEeCCCcCccchHHHH
Confidence            5666676 6888899998765   233677776643322    333333211       124666666655666655543


Q ss_pred             HHhhc-CCCEEEEEeCCCCCCCCChHHHHHHHHh
Q 026146           87 GLKHA-SGSFVVIMDADLSHHPKYLPSFIKKQLE  119 (242)
Q Consensus        87 g~~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~  119 (242)
                      ..... -.+.++++.+|.+.+. -+..+++...+
T Consensus        97 ~~~~~~~~~~flv~~gD~i~~~-dl~~~l~~h~~  129 (217)
T cd04197          97 LDAKGLIRGDFILVSGDVVSNI-DLKEILEEHKE  129 (217)
T ss_pred             HhhccccCCCEEEEeCCeeecc-CHHHHHHHHHH
Confidence            22211 1345779999977654 46777777665

N-terminal domain of epsilon subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional

Probab=88.50  E-value=11  Score=30.75  Aligned_cols=106  Identities=15%  Similarity=0.087  Sum_probs=67.2

Q ss_pred             CcEEEEEeCcc-ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC----------CC
Q 026146            9 NKYSIIIPTYN-ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP----------KK   77 (242)
Q Consensus         9 ~~isiiip~~n-~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~----------~~   77 (242)
                      +.+.|+..+=+ -...+.-++.|+........+.+.|++++-+++..+.++++...++ ..+.++.-+          .+
T Consensus        24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~~-~~i~~~~id~~~~~~~~~~~~  102 (334)
T PRK15171         24 NSLDIAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYN-TRINIYLINCERLKSLPSTKN  102 (334)
T ss_pred             CceeEEEECcHhhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhcC-CeEEEEEeCHHHHhCCcccCc
Confidence            56777777733 3466677888887654334689999999888888888888877764 345544321          11


Q ss_pred             cc-hHHHHHHHHhhc--CCCEEEEEeCCCCCCCCChHHHHHH
Q 026146           78 LG-LGTAYIHGLKHA--SGSFVVIMDADLSHHPKYLPSFIKK  116 (242)
Q Consensus        78 ~g-~~~a~n~g~~~a--~~d~i~~lD~D~~~~~~~l~~l~~~  116 (242)
                      .. ....|-..-+.-  .-|-++.||+|.++.. .+.+|...
T Consensus       103 ~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~-dl~~L~~~  143 (334)
T PRK15171        103 WTYATYFRFIIADYFIDKTDKVLYLDADIACKG-SIKELIDL  143 (334)
T ss_pred             CCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecC-CHHHHHhc
Confidence            11 122222222332  4689999999977654 56666644

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit

Probab=87.47  E-value=0.25  Score=45.24  Aligned_cols=53  Identities=17%  Similarity=0.223  Sum_probs=40.9

Q ss_pred             cEEEeeCCCCcc-----hHHHHHHHHhhc----CCCEEEEEeCCCCC-CCCChHHHHHHHHhc
Q 026146           68 RILLRPRPKKLG-----LGTAYIHGLKHA----SGSFVVIMDADLSH-HPKYLPSFIKKQLET  120 (242)
Q Consensus        68 ~~~~~~~~~~~g-----~~~a~n~g~~~a----~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~  120 (242)
                      .+.|+.++++.|     |++|+|.-++-+    .++||+-+|.|-.. ++..+...+-.+.+.
T Consensus       455 ~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~  517 (1044)
T PLN02915        455 RLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDP  517 (1044)
T ss_pred             eeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecC
Confidence            456666555555     899999999876    58999999999885 577888888777653

>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=87.32  E-value=2.8  Score=35.57  Aligned_cols=170  Identities=11%  Similarity=0.122  Sum_probs=87.0

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-CCEEEEEe
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-GSFVVIMD  100 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~i~~lD  100 (242)
                      ..++..++++.+.   ..-+++++-.-.    .+.+++....   ..+.++..+...|.+.+.-.++.... .+++++++
T Consensus        34 pli~~~i~~l~~~---gi~~i~vv~~~~----~~~i~~~~~~---~~~~~i~~~~~~Gt~~al~~a~~~l~~~~~vlV~~  103 (456)
T PRK09451         34 PMVQHVIDAANEL---GAQHVHLVYGHG----GDLLKQTLAD---EPLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLY  103 (456)
T ss_pred             hHHHHHHHHHHhc---CCCcEEEEECCC----HHHHHHhhcc---CCcEEEECCCCCCcHHHHHHHHHhhccCCcEEEEe
Confidence            3445666666543   122566665422    1233333221   24666666666788888888887764 57899999


Q ss_pred             CCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCC-------ccccccchhhc
Q 026146          101 ADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPG-------VSDLTGSFRLY  172 (242)
Q Consensus       101 ~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~  172 (242)
                      +|.. +.+..++.+++...+.+..+ ..... .+....+.- ..   .  ..........+.       ......+.+++
T Consensus       104 gD~P~i~~~~i~~l~~~~~~~~~~i-~~~~~-~~~~~yG~v-~~---~--~g~V~~~~EKp~~~~~~~~~~~~~~GiYi~  175 (456)
T PRK09451        104 GDVPLISVETLQRLRDAKPQGGIGL-LTVKL-DNPTGYGRI-TR---E--NGKVVGIVEQKDATDEQRQIQEINTGILVA  175 (456)
T ss_pred             CCcccCCHHHHHHHHHHhhcCCEEE-EEEEc-CCCCCceEE-Ee---c--CCeEEEEEECCCCChHHhhccEEEEEEEEE
Confidence            9974 67778888887654433222 22111 111100100 00   0  000000000000       11235566789


Q ss_pred             chHHHHHhhhcccC---CCcccchHHHHHHHHcCCceEEe
Q 026146          173 KKSVLEDVISSCVS---KGYVFQMEMIVRACRKGYHIEEV  209 (242)
Q Consensus       173 rr~~~~~~~~~~~~---~~~~~d~~~~~~~~~~g~~i~~~  209 (242)
                      +++.|.+.......   ....+-.++...+...|+++...
T Consensus       176 ~~~~l~~~l~~~~~~~~~~e~~l~d~i~~~i~~g~~v~~~  215 (456)
T PRK09451        176 NGADLKRWLAKLTNNNAQGEYYITDIIALAHQEGREIVAV  215 (456)
T ss_pred             EHHHHHHHHHhcCCccccCceeHHHHHHHHHHCCCeEEEE
Confidence            98888764221111   11112247888888899887766

>PLN02190 cellulose synthase-like protein

Probab=86.94  E-value=1.6  Score=39.00  Aligned_cols=55  Identities=18%  Similarity=0.152  Sum_probs=44.1

Q ss_pred             CCCcEEEEEeCcc---cccc-HHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHH
Q 026146            7 NKNKYSIIIPTYN---ERLN-IALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQ   61 (242)
Q Consensus         7 ~~~~isiiip~~n---~~~~-l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~   61 (242)
                      ..|.|.|.|+|++   |+.. +..++-|+.+..++ ....++|-|||.+.-|.+.+.+.+
T Consensus        91 ~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa  150 (756)
T PLN02190         91 DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEAS  150 (756)
T ss_pred             cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHH
Confidence            3589999999999   5543 36788888888777 577899999999998888777654

>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional

Probab=86.89  E-value=7.4  Score=32.23  Aligned_cols=91  Identities=13%  Similarity=0.027  Sum_probs=55.3

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEe
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMD  100 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD  100 (242)
                      ...+..+++.+.+..  .--+|+||-+..   ..+..+.+....+  .+.++..  ..+...+...|++....+++++.|
T Consensus        33 kPll~~tl~~l~~~~--~i~~IvVVv~~~---~~~~~~~~~~~~~--~v~~v~g--G~~r~~SV~~gL~~l~~d~VLVhd  103 (378)
T PRK09382         33 KPLWLHVLENLSSAP--AFKEIVVVIHPD---DIAYMKKALPEIK--FVTLVTG--GATRQESVRNALEALDSEYVLIHD  103 (378)
T ss_pred             eeHHHHHHHHHhcCC--CCCeEEEEeChH---HHHHHHHhcccCC--eEEEeCC--CchHHHHHHHHHHhcCCCeEEEee
Confidence            455666777765441  112666665422   2233333322111  2444432  234677788888887779999999


Q ss_pred             CCCC-CCCCChHHHHHHHHhc
Q 026146          101 ADLS-HHPKYLPSFIKKQLET  120 (242)
Q Consensus       101 ~D~~-~~~~~l~~l~~~~~~~  120 (242)
                      +|-. ++++.++++++.+.+.
T Consensus       104 adrPfv~~e~I~~li~~~~~~  124 (378)
T PRK09382        104 AARPFVPKELIDRLIEALDKA  124 (378)
T ss_pred             ccccCCCHHHHHHHHHHhhcC
Confidence            9965 7899999999887543

>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism]

Probab=86.38  E-value=13  Score=28.45  Aligned_cols=91  Identities=20%  Similarity=0.174  Sum_probs=57.9

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC---CCEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS---GSFVV   97 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~---~d~i~   97 (242)
                      ...+..+|+.+....  .--+|||+-+...+.....+-.   .....++.++.-  ......+...|++...   .+||+
T Consensus        32 ~pll~~tl~~f~~~~--~i~~Ivvv~~~~~~~~~~~~~~---~~~~~~v~~v~G--G~~R~~SV~~gL~~~~~~~~~~Vl  104 (230)
T COG1211          32 RPLLEHTLEAFLESP--AIDEIVVVVSPEDDPYFEKLPK---LSADKRVEVVKG--GATRQESVYNGLQALSKYDSDWVL  104 (230)
T ss_pred             EEehHHHHHHHHhCc--CCCeEEEEEChhhhHHHHHhhh---hccCCeEEEecC--CccHHHHHHHHHHHhhccCCCEEE
Confidence            456777888876653  2337888877655443332222   111235666643  2357778888888876   78888


Q ss_pred             EEeCC-CCCCCCChHHHHHHHH
Q 026146           98 IMDAD-LSHHPKYLPSFIKKQL  118 (242)
Q Consensus        98 ~lD~D-~~~~~~~l~~l~~~~~  118 (242)
                      +-|+= ..++++.+++++....
T Consensus       105 vHDaaRPf~~~~~i~~li~~~~  126 (230)
T COG1211         105 VHDAARPFLTPKLIKRLIELAD  126 (230)
T ss_pred             EeccccCCCCHHHHHHHHHhhc
Confidence            88884 5588999999995443

>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]

Probab=86.04  E-value=1  Score=38.51  Aligned_cols=92  Identities=9%  Similarity=0.079  Sum_probs=63.2

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHH-HHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVK-QLQQLYGEDRILLRPRPKKLGLGTAYIH   86 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~-~~~~~~~~~~~~~~~~~~~~g~~~a~n~   86 (242)
                      .-.++|++.||.+++.+...|+.|... .+ --.|+||=|+..+...+..- ++     +..+.+++-++|.  -.++-.
T Consensus       648 REQFTvVmLTYERe~VLm~sLeRL~gL-PY-LnKvvVVWNspk~P~ddl~WPdi-----gvPv~viR~~~Ns--LNNRFl  718 (907)
T KOG2264|consen  648 REQFTVVMLTYEREAVLMGSLERLHGL-PY-LNKVVVVWNSPKDPPDDLTWPDI-----GVPVEVIRVAENS--LNNRFL  718 (907)
T ss_pred             cceEEEEEEEehHHHHHHHHHHHhhCC-cc-cceEEEEeCCCCCChhcccCcCC-----CCceEEEEccccc--cccccc
Confidence            346999999999999999999998554 32 23688888877766543221 12     3467778766552  123334


Q ss_pred             HHhhcCCCEEEEEeCCCCCCCC
Q 026146           87 GLKHASGSFVVIMDADLSHHPK  108 (242)
Q Consensus        87 g~~~a~~d~i~~lD~D~~~~~~  108 (242)
                      -++...++.|+-+|+|.-+..+
T Consensus       719 Pwd~IETEAvLS~DDDahLrhd  740 (907)
T KOG2264|consen  719 PWDRIETEAVLSLDDDAHLRHD  740 (907)
T ss_pred             Cchhhhheeeeecccchhhhhh
Confidence            5667789999999999665443

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family

Probab=85.96  E-value=11  Score=29.12  Aligned_cols=93  Identities=14%  Similarity=0.110  Sum_probs=60.8

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--C---C--cch----HHHHHHHH
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--K---K--LGL----GTAYIHGL   88 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--~---~--~g~----~~a~n~g~   88 (242)
                      -...+.-++.|+.... ...+.++|++++-+++..+.++++...++ ..+.++.-.  .   .  ...    +.++ ..+
T Consensus        12 y~~~~~v~l~Sll~nn-~~~~~fyil~~~is~e~~~~l~~~~~~~~-~~i~~i~i~~~~~~~~~~~~~~~~~~y~r-L~~   88 (248)
T cd06432          12 YERFLRIMMLSVMKNT-KSPVKFWFIKNFLSPQFKEFLPEMAKEYG-FEYELVTYKWPRWLHKQTEKQRIIWGYKI-LFL   88 (248)
T ss_pred             HHHHHHHHHHHHHHcC-CCCEEEEEEeCCCCHHHHHHHHHHHHHhC-CceEEEEecChhhhhcccccchhHHHHHH-HHH
Confidence            3456778899988775 35799999999988888888988887764 345544432  0   0  011    1122 222


Q ss_pred             h-hc--CCCEEEEEeCCCCCCCCChHHHHHH
Q 026146           89 K-HA--SGSFVVIMDADLSHHPKYLPSFIKK  116 (242)
Q Consensus        89 ~-~a--~~d~i~~lD~D~~~~~~~l~~l~~~  116 (242)
                      . .-  .-+-++.||+|.++. +-+.++...
T Consensus        89 ~~lLP~~vdkvLYLD~Dilv~-~dL~eL~~~  118 (248)
T cd06432          89 DVLFPLNVDKVIFVDADQIVR-TDLKELMDM  118 (248)
T ss_pred             HHhhhhccCEEEEEcCCceec-ccHHHHHhc
Confidence            2 11  358999999998766 667777754

C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.

>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]

Probab=85.47  E-value=12  Score=27.18  Aligned_cols=85  Identities=20%  Similarity=0.200  Sum_probs=66.6

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEe
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMD  100 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD  100 (242)
                      ...+-..++.+.+.    -.++++.-+-++..|...+.+.       .+.++..++ .|+-.-++.+++.... -++++-
T Consensus        27 kpLI~~v~~al~~~----~d~i~v~isp~tp~t~~~~~~~-------gv~vi~tpG-~GYv~Dl~~al~~l~~-P~lvvs   93 (177)
T COG2266          27 KPLIDRVLEALRKI----VDEIIVAISPHTPKTKEYLESV-------GVKVIETPG-EGYVEDLRFALESLGT-PILVVS   93 (177)
T ss_pred             ccHHHHHHHHHHhh----cCcEEEEeCCCCHhHHHHHHhc-------CceEEEcCC-CChHHHHHHHHHhcCC-ceEEEe
Confidence            35566777777652    3389999999999998888775       477887664 5899999999999877 667777


Q ss_pred             CCCC-CCCCChHHHHHHHH
Q 026146          101 ADLS-HHPKYLPSFIKKQL  118 (242)
Q Consensus       101 ~D~~-~~~~~l~~l~~~~~  118 (242)
                      +|.. +.|..+..+++.+.
T Consensus        94 aDLp~l~~~~i~~vi~~~~  112 (177)
T COG2266          94 ADLPFLNPSIIDSVIDAAA  112 (177)
T ss_pred             cccccCCHHHHHHHHHHHh
Confidence            8866 88999999998886

>PLN02241 glucose-1-phosphate adenylyltransferase

Probab=85.15  E-value=5.1  Score=33.88  Aligned_cols=107  Identities=16%  Similarity=0.059  Sum_probs=59.0

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCC--------CcEEEeeCC-------CCc
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE--------DRILLRPRP-------KKL   78 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~--------~~~~~~~~~-------~~~   78 (242)
                      .+|.-++...+...|+.+.+.   .--+++++-+-..+...+.+.   +.+..        ..+.+....       ...
T Consensus        28 llpv~g~~plId~~L~~l~~~---Gi~~i~iv~~~~~~~i~~~l~---~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~l  101 (436)
T PLN02241         28 AVPIGGNYRLIDIPMSNCINS---GINKIYVLTQFNSASLNRHLS---RAYNFGNGGNFGDGFVEVLAATQTPGEKGWFQ  101 (436)
T ss_pred             ceEeCCcceEehHHHHHHHhC---CCCEEEEEeccCHHHHHHHHh---ccCCCCCCcccCCCCEEEcCCcccCCCCcccc
Confidence            456655556778888888754   223666665532222222222   21110        012222211       246


Q ss_pred             chHHHHHHHHhhcC------CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146           79 GLGTAYIHGLKHAS------GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        79 g~~~a~n~g~~~a~------~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      |.+.|+..++....      .+.++++.+|.+.+ ..+..+++...+.+.++.+.
T Consensus       102 Gt~~al~~~~~~~~~~~~~~~~~~lv~~gD~v~~-~dl~~ll~~h~~~~a~~ti~  155 (436)
T PLN02241        102 GTADAVRQFLWLFEDAKNKNVEEVLILSGDHLYR-MDYMDFVQKHRESGADITIA  155 (436)
T ss_pred             CcHHHHHHHHHHHHhcccCCCCEEEEecCCeEEc-cCHHHHHHHHHHcCCCEEEE
Confidence            77777766554432      47899999998755 45777777777667765443

>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=85.11  E-value=15  Score=30.96  Aligned_cols=107  Identities=14%  Similarity=0.082  Sum_probs=61.9

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC------CCcEEEee-------CCCCcch
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG------EDRILLRP-------RPKKLGL   80 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~------~~~~~~~~-------~~~~~g~   80 (242)
                      .+|.-+....|...++.+.+.   .--+|+|+-+-..+...+.+.   +.+.      ...+.++.       .+...|-
T Consensus        40 llpv~gkp~lI~~~l~~l~~~---Gi~~i~vv~~~~~~~i~~~~~---~~~~~~~~~~~~~i~i~~~~~~~~~e~~~lGT  113 (425)
T PRK00725         40 AVYFGGKFRIIDFALSNCINS---GIRRIGVLTQYKAHSLIRHIQ---RGWSFFREELGEFVDLLPAQQRVDEENWYRGT  113 (425)
T ss_pred             eEEECCEEEEhHHHHHHHHHC---CCCeEEEEecCCHHHHHHHHH---hhhcccccCCCCeEEEeCCcccCCCCccccCc
Confidence            445545444777788888654   223677776643332222222   1111      00122211       1123688


Q ss_pred             HHHHHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146           81 GTAYIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        81 ~~a~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      +.|.-.+.....   .++++++.+|.+.+ ..+..+++...+.+.++.++
T Consensus       114 a~al~~a~~~l~~~~~d~~lVl~gD~l~~-~dl~~ll~~h~~~~~~~tl~  162 (425)
T PRK00725        114 ADAVYQNLDIIRRYDPKYVVILAGDHIYK-MDYSRMLADHVESGADCTVA  162 (425)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEecCCeEec-cCHHHHHHHHHHcCCCEEEE
Confidence            888888877654   58899999998654 45788888777666666554

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=85.07  E-value=2  Score=32.79  Aligned_cols=95  Identities=15%  Similarity=0.094  Sum_probs=50.7

Q ss_pred             cccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCC-cEEEeeC------------CCCc-chHHHHH
Q 026146           21 RLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGED-RILLRPR------------PKKL-GLGTAYI   85 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~-~~~~~~~------------~~~~-g~~~a~n   85 (242)
                      ...+.-++.|+.+.... ..+.+++++++.+++..+.+++........ .+.....            .... ....++-
T Consensus        11 ~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl   90 (250)
T PF01501_consen   11 LEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFSPATFARL   90 (250)
T ss_dssp             HHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGGGGGGGGG
T ss_pred             HHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccccccHHHHHHh
Confidence            34456677888777553 467899898877766666665554332111 1111110            0011 1222333


Q ss_pred             HHHhh-cCCCEEEEEeCCCCCCCCChHHHHHH
Q 026146           86 HGLKH-ASGSFVVIMDADLSHHPKYLPSFIKK  116 (242)
Q Consensus        86 ~g~~~-a~~d~i~~lD~D~~~~~~~l~~l~~~  116 (242)
                      ...+. ...|-+++||+|.++- +-+..+...
T Consensus        91 ~i~~ll~~~drilyLD~D~lv~-~dl~~lf~~  121 (250)
T PF01501_consen   91 FIPDLLPDYDRILYLDADTLVL-GDLDELFDL  121 (250)
T ss_dssp             GHHHHSTTSSEEEEE-TTEEES-S-SHHHHC-
T ss_pred             hhHHHHhhcCeEEEEcCCeeee-cChhhhhcc
Confidence            44455 5679999999998874 345555543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]

Probab=85.00  E-value=12  Score=31.35  Aligned_cols=177  Identities=14%  Similarity=0.159  Sum_probs=99.7

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-C-CC-EEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-S-GS-FVVI   98 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-~-~d-~i~~   98 (242)
                      +.+...++++....  +. ++++|-.-..+.    +++...+.  ..+.++...+..|-+.|.-.+...- . .+ .+++
T Consensus        31 pMl~hVi~~a~~l~--~~-~i~vVvGh~ae~----V~~~~~~~--~~v~~v~Q~eqlGTgHAV~~a~~~l~~~~~g~vLV  101 (460)
T COG1207          31 PMLEHVIDAARALG--PD-DIVVVVGHGAEQ----VREALAER--DDVEFVLQEEQLGTGHAVLQALPALADDYDGDVLV  101 (460)
T ss_pred             cHHHHHHHHHhhcC--cc-eEEEEEcCCHHH----HHHHhccc--cCceEEEecccCChHHHHHhhhhhhhcCCCCcEEE
Confidence            45666777775542  22 455444433332    33222221  1488888888999999999999887 3 23 6899


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhH-------HHHHhHHHHHHHHHhCCCccccccchh
Q 026146           99 MDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMR-------KLTSRGANVLAQTLLWPGVSDLTGSFR  170 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~  170 (242)
                      +-+|.. +.++.|+.|++.....+..+.+-.....++...++-...       .......+.     ....+..+.++.+
T Consensus       102 l~GD~PLit~~TL~~L~~~~~~~~~~~tvLt~~~~dP~GYGRIvr~~~g~V~~IVE~KDA~~-----eek~I~eiNtGiy  176 (460)
T COG1207         102 LYGDVPLITAETLEELLAAHPAHGAAATVLTAELDDPTGYGRIVRDGNGEVTAIVEEKDASE-----EEKQIKEINTGIY  176 (460)
T ss_pred             EeCCcccCCHHHHHHHHHhhhhcCCceEEEEEEcCCCCCcceEEEcCCCcEEEEEEcCCCCH-----HHhcCcEEeeeEE
Confidence            999988 788899988888765555554433332222111111000       000000000     1123445667777


Q ss_pred             hcchHHHHHhhhc---ccCCCcccchHHHHHHHHcCCceEEeeee
Q 026146          171 LYKKSVLEDVISS---CVSKGYVFQMEMIVRACRKGYHIEEVPIT  212 (242)
Q Consensus       171 ~~rr~~~~~~~~~---~~~~~~~~d~~~~~~~~~~g~~i~~~p~~  212 (242)
                      ++..+.+.+....   ....+-.+-.|..-.+...|.++..+...
T Consensus       177 ~f~~~~L~~~L~~l~nnNaqgEYYLTDvI~i~~~~g~~V~a~~~~  221 (460)
T COG1207         177 AFDGAALLRALPKLSNNNAQGEYYLTDVIAIARNEGEKVRAVHVD  221 (460)
T ss_pred             EEcHHHHHHHHHHhccccccCcEeHHHHHHHHHhCCCeEEEEecC
Confidence            8887766655332   11222223567788888899888776533

>COG2068 Uncharacterized MobA-related protein [General function prediction only]

Probab=84.98  E-value=14  Score=27.52  Aligned_cols=91  Identities=21%  Similarity=0.193  Sum_probs=62.5

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHHHHHHhhcCCC--EEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAYIHGLKHASGS--FVV   97 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~n~g~~~a~~d--~i~   97 (242)
                      ...+..+++.+.+.   .--++|||...-   ..+.......   ...++++.++. ..|.+.++..|+..+.++  .++
T Consensus        31 ~plv~~~~~~a~~a---~~~~vivV~g~~---~~~~~~a~~~---~~~~~~v~npd~~~Gls~Sl~ag~~a~~~~~~~v~  101 (199)
T COG2068          31 KPLVRASAETALSA---GLDRVIVVTGHR---VAEAVEALLA---QLGVTVVVNPDYAQGLSTSLKAGLRAADAEGDGVV  101 (199)
T ss_pred             CcHHHHHHHHHHhc---CCCeEEEEeCcc---hhhHHHhhhc---cCCeEEEeCcchhhhHhHHHHHHHHhcccCCCeEE
Confidence            34455566655443   223777776543   2233333322   24577777664 579999999999999755  999


Q ss_pred             EEeCCCC-CCCCChHHHHHHHHhc
Q 026146           98 IMDADLS-HHPKYLPSFIKKQLET  120 (242)
Q Consensus        98 ~lD~D~~-~~~~~l~~l~~~~~~~  120 (242)
                      ++-+|-- +.++.+.+++..+...
T Consensus       102 ~~lgDmP~V~~~t~~rl~~~~~~~  125 (199)
T COG2068         102 LMLGDMPQVTPATVRRLIAAFRAR  125 (199)
T ss_pred             EEeCCCCCCCHHHHHHHHHhcccc
Confidence            9999977 8999999999998765

>PF02348 CTP_transf_3: Cytidylyltransferase; InterPro: IPR003329 Synonym(s): CMP-N-acetylneuraminic acid synthetase Acylneuraminate cytidylyltransferase (2

Probab=84.89  E-value=14  Score=27.58  Aligned_cols=94  Identities=17%  Similarity=0.245  Sum_probs=58.3

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCC---EE
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGS---FV   96 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d---~i   96 (242)
                      ..+.+..+++.+++...  --+|+|--|.  +...+.++++    . ..+.+.+ +.-.........++++...+   ++
T Consensus        23 gkpLi~~~i~~a~~s~~--~d~IvVaTd~--~~i~~~~~~~----g-~~v~~~~-~~~~~~~~r~~~~~~~~~~~~~~~v   92 (217)
T PF02348_consen   23 GKPLIEYVIERAKQSKL--IDEIVVATDD--EEIDDIAEEY----G-AKVIFRR-GSLADDTDRFIEAIKHFLADDEDIV   92 (217)
T ss_dssp             TEEHHHHHHHHHHHTTT--TSEEEEEESS--HHHHHHHHHT----T-SEEEE---TTSSSHHHHHHHHHHHHTCSTTSEE
T ss_pred             CccHHHHHHHHHHhCCC--CCeEEEeCCC--HHHHHHHHHc----C-CeeEEcC-hhhcCCcccHHHHHHHhhhhHHhhc
Confidence            34667888888876532  2256655442  1233334333    3 3454433 33334555666777777766   99


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCc
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGAS  123 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~  123 (242)
                      +.+.+|+. ++|..+.++++.+.+...+
T Consensus        93 v~~~~d~Pll~~~~i~~~i~~~~~~~~~  120 (217)
T PF02348_consen   93 VRLQGDSPLLDPTSIDRAIEDIREANED  120 (217)
T ss_dssp             EEESTTETT--HHHHHHHHHHHHHSTTS
T ss_pred             cccCCeeeECCHHHHHHHHHHHhcCchh
Confidence            99999988 7899999999999887665

7.7.43 from EC) (CMP-NeuAc synthetase) catalyzes the reaction of CTP and NeuAc to form CMP-NeuAc, which is the nucleotide sugar donor used by sialyltransferases []. The outer membrane lipooligosaccharides of some microorganisms contain terminal sialic acid attached to N-acetyllactosamine and so this modification may be important in pathogenesis.; GO: 0009103 lipopolysaccharide biosynthetic process; PDB: 3K8D_C 1VH1_B 3K8E_C 1QWJ_A 3EWI_A 1VIC_B 3DUV_A 1VH3_C 3TQD_A 2Y6P_C ....

>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity

Probab=84.44  E-value=15  Score=27.58  Aligned_cols=96  Identities=13%  Similarity=0.040  Sum_probs=54.1

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCc--EEEeeCCCCcchHHHHHHHHh
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDR--ILLRPRPKKLGLGTAYIHGLK   89 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~--~~~~~~~~~~g~~~a~n~g~~   89 (242)
                      .+|.-|. ..+..+++.+.+.   .--+++|+-....+...+.+.+....  .....  +.+.......|-+.+...+..
T Consensus        25 llpv~g~-pli~~~l~~l~~~---gi~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~Gta~~l~~~~~  100 (216)
T cd02507          25 LLPVANV-PLIDYTLEWLEKA---GVEEVFVVCCEHSQAIIEHLLKSKWSSLSSKMIVDVITSDLCESAGDALRLRDIRG  100 (216)
T ss_pred             cceECCE-EHHHHHHHHHHHC---CCCeEEEEeCCcHHHHHHHHHhcccccccCCceEEEEEccCCCCCccHHHHHHHhh
Confidence            3455554 7788888888764   22367777654333322222221100  01112  333334457788888888777


Q ss_pred             hcCCCEEEEEeCCCCCCCCChHHHHH
Q 026146           90 HASGSFVVIMDADLSHHPKYLPSFIK  115 (242)
Q Consensus        90 ~a~~d~i~~lD~D~~~~~~~l~~l~~  115 (242)
                      ....+ ++++.+|.+.+.+ +..+++
T Consensus       101 ~i~~d-flv~~gD~i~~~~-l~~~l~  124 (216)
T cd02507         101 LIRSD-FLLLSCDLVSNIP-LSELLE  124 (216)
T ss_pred             cCCCC-EEEEeCCEeecCC-HHHHHH
Confidence            76555 6789999876655 555564

N-terminal domain of eEIF-2B epsilon and gamma, subunits of eukaryotic translation initiators, is a subfamily of glycosyltranferase 2 and is predicted to have glycosyltranferase activity. eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.

>PHA01631 hypothetical protein

Probab=84.44  E-value=1.2  Score=31.60  Aligned_cols=65  Identities=20%  Similarity=0.305  Sum_probs=39.6

Q ss_pred             CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC---CCcchHHHHHHHHhh---cCCCEEEEEeCCCCCCCC
Q 026146           39 DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP---KKLGLGTAYIHGLKH---ASGSFVVIMDADLSHHPK  108 (242)
Q Consensus        39 ~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~---~~~g~~~a~n~g~~~---a~~d~i~~lD~D~~~~~~  108 (242)
                      ++..++||+.=.+-|.-.++..     ..++......   .+...+..+-..++.   ...|+++|+|+|..+++-
T Consensus        17 ~~D~V~VD~~~~~~~~c~~~~~-----~~~Ii~~~t~~e~Rr~RIAk~Ll~Iln~~s~i~DDi~~iIDSDV~ipn~   87 (176)
T PHA01631         17 DFDYVVVDKTFNDMTECQIPKY-----QEKIIWIMTNTEIRWLRIAKQLLTIVNFAKNIEDDIIAIIDSDLIIPNL   87 (176)
T ss_pred             cccEEEEccccccccccccccc-----CCceEEecccchhHHHHHHHHHHHHHHhhccCCccEEEEeccceEecCc
Confidence            6788999987655443322222     1234333322   234466666677554   568999999999887654

>TIGR02091 glgC glucose-1-phosphate adenylyltransferase

Probab=84.28  E-value=7.4  Score=31.85  Aligned_cols=104  Identities=14%  Similarity=0.131  Sum_probs=59.6

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCC-----CcEEEee-------CCCCcchH
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE-----DRILLRP-------RPKKLGLG   81 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~-----~~~~~~~-------~~~~~g~~   81 (242)
                      ++|..+....+...++++.+.   .--+|+|+-.-..+...+.+.+   .+..     ..+.++.       .+...|.+
T Consensus        23 llpv~g~~pli~~~l~~l~~~---gi~~i~iv~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~   96 (361)
T TIGR02091        23 AVPFGGKYRIIDFPLSNCINS---GIRRIGVLTQYKSHSLNRHIQR---GWDFDGFIDGFVTLLPAQQRESGTDWYQGTA   96 (361)
T ss_pred             cceecceeeEeeehhhhhhhc---CCceEEEEeccChHHHHHHHHh---ccCccCccCCCEEEeCCcccCCCCccccCcH
Confidence            344545435677788888664   2236777766443333333332   1110     1233321       11236878


Q ss_pred             HHHHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcE
Q 026146           82 TAYIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASI  124 (242)
Q Consensus        82 ~a~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~  124 (242)
                      .+.-.++....   .+.++++.+|.+.+.+ +..+++.+.+.+.++
T Consensus        97 ~al~~a~~~~~~~~~~~~lv~~gD~l~~~~-l~~~l~~~~~~~~~~  141 (361)
T TIGR02091        97 DAVYQNLDLIEDYDPEYVLILSGDHIYKMD-YEKMLDYHIESGADV  141 (361)
T ss_pred             HHHHHHHHHHHhcCCCEEEEecCCEEEcCC-HHHHHHHHHHcCCCE
Confidence            88888877764   5789999999876554 677777666555543

This enzyme, glucose-1-phosphate adenylyltransferase, is also called ADP-glucose pyrophosphorylase. The plant form is an alpha2,beta2 heterodimer, allosterically regulated in plants. Both subunits are homologous and included in this model. In bacteria, both homomeric forms of GlgC and more active heterodimers of GlgC and GlgD have been described. This model describes the GlgC subunit only. This enzyme appears in variants of glycogen synthesis pathways that use ADP-glucose, rather than UDP-glucose as in animals.

>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

Probab=82.42  E-value=8.7  Score=29.84  Aligned_cols=106  Identities=16%  Similarity=0.137  Sum_probs=60.5

Q ss_pred             CCcEEEEEeCccc-----------------cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEE
Q 026146            8 KNKYSIIIPTYNE-----------------RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRIL   70 (242)
Q Consensus         8 ~~~isiiip~~n~-----------------~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~   70 (242)
                      ++.+++||++-..                 ...+..+++.+.+..  ..-+|+||-+..   ..+.++.....++ ..+.
T Consensus        22 ~~~i~aIILAAG~gsRmg~~~pKqll~l~Gkpll~~tl~~~~~~~--~i~~IvVV~~~~---~~~~~~~~~~~~~-~~i~   95 (252)
T PLN02728         22 EKSVSVILLAGGVGKRMGANMPKQYLPLLGQPIALYSLYTFARMP--EVKEIVVVCDPS---YRDVFEEAVENID-VPLK   95 (252)
T ss_pred             cCceEEEEEcccccccCCCCCCcceeEECCeEHHHHHHHHHHhCC--CCCeEEEEeCHH---HHHHHHHHHHhcC-CceE
Confidence            3457777776432                 233455666654421  123677765532   1233333333322 2344


Q ss_pred             EeeCCCCcchHHHHHHHHhhcC--CCEEEEEeCCCC-CCCCChHHHHHHHHhcC
Q 026146           71 LRPRPKKLGLGTAYIHGLKHAS--GSFVVIMDADLS-HHPKYLPSFIKKQLETG  121 (242)
Q Consensus        71 ~~~~~~~~g~~~a~n~g~~~a~--~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~  121 (242)
                      ++.  +..+...+.-.|++...  .++|++.|++-- ++++.+.++++.+.+.+
T Consensus        96 ~v~--gg~~r~~SV~~gl~~l~~~~~~VlihDaarP~vs~~~i~~li~~~~~~g  147 (252)
T PLN02728         96 FAL--PGKERQDSVFNGLQEVDANSELVCIHDSARPLVTSADIEKVLKDAAVHG  147 (252)
T ss_pred             EcC--CCCchHHHHHHHHHhccCCCCEEEEecCcCCCCCHHHHHHHHHHHhhCC
Confidence            432  23345677888888753  577888887644 88999999999886644

>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional

Probab=82.02  E-value=14  Score=30.50  Aligned_cols=85  Identities=14%  Similarity=0.163  Sum_probs=55.8

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHHHHHHhhcCCCEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAYIHGLKHASGSFVV   97 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~n~g~~~a~~d~i~   97 (242)
                      +....+..+++.+...    .-+++|+.+.+.   ...+..       ..+.++.... ..|+..+...|++++..++++
T Consensus       198 ~Gk~ll~~~l~~l~~~----~~~vvV~~~~~~---~~~~~~-------~~v~~i~d~~~~~Gpl~gi~~al~~~~~~~~l  263 (369)
T PRK14490        198 HESNQLVHTAALLRPH----CQEVFISCRAEQ---AEQYRS-------FGIPLITDSYLDIGPLGGLLSAQRHHPDAAWL  263 (369)
T ss_pred             CCccHHHHHHHHHHhh----CCEEEEEeCCch---hhHHhh-------cCCcEEeCCCCCCCcHHHHHHHHHhCCCCcEE
Confidence            4456677778777643    125666655331   111111       1344555432 468888888999888888999


Q ss_pred             EEeCCCC-CCCCChHHHHHHH
Q 026146           98 IMDADLS-HHPKYLPSFIKKQ  117 (242)
Q Consensus        98 ~lD~D~~-~~~~~l~~l~~~~  117 (242)
                      |+=+|.- ++++.++.++...
T Consensus       264 v~~~DmP~i~~~~i~~L~~~~  284 (369)
T PRK14490        264 VVACDLPFLDEATLQQLVEGR  284 (369)
T ss_pred             EEeCCcCCCCHHHHHHHHHhc
Confidence            9999977 7899999988764

>COG1861 SpsF Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog [Cell envelope biogenesis, outer membrane]

Probab=81.83  E-value=20  Score=27.15  Aligned_cols=100  Identities=18%  Similarity=0.224  Sum_probs=65.6

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEE
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIM   99 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~l   99 (242)
                      ....|..+|+.+.+...  -.++||. - |.+++.+.++.++.+++   +.+.+-++. ..-.=+-.+++.-.++.|+=+
T Consensus        27 ~~pmI~~~lervrks~~--~d~ivvA-T-S~~~~d~~l~~~~~~~G---~~vfrGs~~-dVL~Rf~~a~~a~~~~~VVRv   98 (241)
T COG1861          27 GEPMIEYQLERVRKSKD--LDKIVVA-T-SDKEEDDALEEVCRSHG---FYVFRGSEE-DVLQRFIIAIKAYSADVVVRV   98 (241)
T ss_pred             CCchHHHHHHHHhcccc--ccceEEE-e-cCCcchhHHHHHHHHcC---eeEecCCHH-HHHHHHHHHHHhcCCCeEEEe
Confidence            34667888888876632  1244443 2 55566777888777664   555542211 122223344555568999999


Q ss_pred             eCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146          100 DADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus       100 D~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      -+|+- ++|+.+...+..+.+.+.|.+.+
T Consensus        99 TGD~P~~dp~l~d~~v~~~l~~gaDY~s~  127 (241)
T COG1861          99 TGDNPFLDPELVDAAVDRHLEKGADYVSN  127 (241)
T ss_pred             eCCCCCCCHHHHHHHHHHHHhcCCccccc
Confidence            99998 78999999998887778777654

>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=81.32  E-value=12  Score=31.26  Aligned_cols=107  Identities=15%  Similarity=0.129  Sum_probs=62.0

Q ss_pred             EEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC--CCcEEEeeC---C------CCcchHH
Q 026146           14 IIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG--EDRILLRPR---P------KKLGLGT   82 (242)
Q Consensus        14 iip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~--~~~~~~~~~---~------~~~g~~~   82 (242)
                      .+|.-++...|...|++|.+.   .--+|+|+-.-..+...+.+.   ..+.  .....++..   .      ...|.+.
T Consensus        30 llPv~gk~plI~~~L~~l~~~---Gi~~i~iv~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~lGta~  103 (407)
T PRK00844         30 AVPFGGSYRLIDFVLSNLVNS---GYLRIYVLTQYKSHSLDRHIS---QTWRLSGLLGNYITPVPAQQRLGKRWYLGSAD  103 (407)
T ss_pred             ceeeCCcceEhHHHHHHHHHC---CCCEEEEEeccCHHHHHHHHH---hCcCccccCCCeEEECCcccCCCCCcccCCHH
Confidence            455556556788888888764   223677776643333333232   1111  111222221   1      1368888


Q ss_pred             HHHHHHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146           83 AYIHGLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        83 a~n~g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      |+..+.....   .++++++.+|.+.+ ..+..+++...+.+.++.+.
T Consensus       104 al~~a~~~i~~~~~~~~lv~~gD~v~~-~dl~~l~~~h~~~~~~~ti~  150 (407)
T PRK00844        104 AIYQSLNLIEDEDPDYVVVFGADHVYR-MDPRQMVDFHIESGAGVTVA  150 (407)
T ss_pred             HHHHHHHHHHhcCCCEEEEecCCEEEc-CCHHHHHHHHHhcCCcEEEE
Confidence            8888877753   37899999998654 45677777776666665433

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=80.22  E-value=16  Score=24.90  Aligned_cols=91  Identities=16%  Similarity=0.139  Sum_probs=50.4

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc--C
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA--S   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a--~   92 (242)
                      |-.-++.+......+.+....  .+++++---||.+....+.......... ......-.++..|-..+...+++.+  +
T Consensus         5 InL~~~~~Rr~~~~~~~~~~~--~~~~~~~Avd~~~~~~~~~~~~~~~~~~-~~~~~~l~~gEiGC~lSH~~~w~~~~~~   81 (128)
T cd06532           5 INLDRSTDRRERMEAQLAALG--LDFEFFDAVDGKDLSEEELAALYDALFL-PRYGRPLTPGEIGCFLSHYKLWQKIVES   81 (128)
T ss_pred             EECCCCHHHHHHHHHHHHHcC--CCeEEEeccccccCCHHHHHHHhHHHhh-hhcCCCCChhhHHHHHHHHHHHHHHHHc
Confidence            333344455555555444332  4678887777776654443332211000 0000011234566667777777765  3


Q ss_pred             C-CEEEEEeCCCCCCCC
Q 026146           93 G-SFVVIMDADLSHHPK  108 (242)
Q Consensus        93 ~-d~i~~lD~D~~~~~~  108 (242)
                      + ++++++.+|..+.++
T Consensus        82 ~~~~alIlEDDv~~~~~   98 (128)
T cd06532          82 NLEYALILEDDAILDPD   98 (128)
T ss_pred             CCCeEEEEccCcEECCC
Confidence            4 999999999998888

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	242
2z86_A	625	Crystal Structure Of Chondroitin Polymerase From Es		5e-09
2z87_A	624	Crystal Structure Of Chondroitin Polymerase From Es		5e-09
3e25_A	337	Crystal Structure Of M. Tuberculosis Glucosyl-3- Ph		6e-06
4ddz_A	344	Crystal Structure Of Glucosyl-3-Phosphoglycerate Sy		6e-06
3bcv_A	240	Crystal Structure Of A Putative Glycosyltransferase		6e-05
3ckj_A	329	Crystal Structure Of A Mycobacterial Protein Length		1e-04

>pdb|2Z86|A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp Length = 625

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILL 71
           SI+IPTYN    +A+ +  +       D+E+IV DDGS +  +E+V++ + L     +  
Sbjct: 96  SIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYV-- 153
Query: 72  RPRPKKLGLGTAYIH--GLKHASGSFVVIMDADLSHHPKYLPSFIK 115
             R K  G     +   GL+ A  ++V I+D D++ +P ++ S+++
Sbjct: 154 --RQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYME 197

>pdb|2Z87|A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp Length = 624

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILL 71
           SI+IPTYN    +A+ +  +       D+E+IV DDGS +  +E+V++ + L     +  
Sbjct: 95  SIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYV-- 152
Query: 72  RPRPKKLGLGTAYIH--GLKHASGSFVVIMDADLSHHPKYLPSFIK 115
             R K  G     +   GL+ A  ++V I+D D++ +P ++ S+++
Sbjct: 153 --RQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYME 196

>pdb|3E25|A Chain A, Crystal Structure Of M. Tuberculosis Glucosyl-3- Phosphoglycerate Synthase Length = 337

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 3   ETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQ 62
           E  K     S+++P  NE   I  ++  I   +  +  E+IV+D GS D T     +++ 
Sbjct: 37  EAAKAGRTISVVLPALNEEATIESVIDSISPLVDGLVDELIVLDSGSTDDT-----EIRA 91
Query: 63  LYGEDRILLRPR-----PKKLGLGTAYIHGLKHASGSFVVIMDADL-SHHPKYLPSFIKK 116
           +    R++ R +     P + G G A    L   SG  VV +D+DL + HP ++P  +  
Sbjct: 92  IASGARVVSREQALPEVPVRPGKGEALWRSLAATSGDIVVFIDSDLINPHPLFVPWLVGP 151
Query: 117 QLETGASI 124
            L TG  I
Sbjct: 152 LL-TGEGI 158

>pdb|4DDZ|A Chain A, Crystal Structure Of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis Length = 344

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 3   ETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQ 62
           E  K     S+++P  NE   I  ++  I   +  +  E+IV+D GS D T     +++ 
Sbjct: 57  EAAKAGRTISVVLPALNEEATIESVIDSISPLVDGLVDELIVLDSGSTDDT-----EIRA 111
Query: 63  LYGEDRILLRPR-----PKKLGLGTAYIHGLKHASGSFVVIMDADL-SHHPKYLPSFIKK 116
           +    R++ R +     P + G G A    L   SG  VV +D+DL + HP ++P  +  
Sbjct: 112 IASGARVVSREQALPEVPVRPGKGEALWRSLAATSGDIVVFIDSDLINPHPLFVPWLVGP 171
Query: 117 QLETGASI 124
            L TG  I
Sbjct: 172 LL-TGEGI 178

>pdb|3BCV|A Chain A, Crystal Structure Of A Putative Glycosyltransferase From Bacteroides Fragilis Length = 240

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 10 KYSIIIPTYN-ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDR 68
          K S+I+P YN E+     +  L+ + L D+  EII++DD SPD   ++       Y   +
Sbjct: 6  KVSVIVPIYNVEKYLDQCVQALLAQTLSDI--EIILIDDESPDNCPKICDDYAAQYPNIK 63
Query: 69 ILLRPRPKKLGLGTAYIHGLKHASGSFV 96
          ++ +   K  GLG A   GL  A+G +V
Sbjct: 64 VIHK---KNAGLGXACNSGLDVATGEYV 88

>pdb|3CKJ|A Chain A, Crystal Structure Of A Mycobacterial Protein Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 3   ETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQ 62
           E  K     S+++P  +E   I  ++  I   +  +  E+IV+D GS D T     +++ 
Sbjct: 42  EAAKAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDT-----EIRA 96
Query: 63  LYGEDRILLRPR-----PKKLGLGTAYIHGLKHASGSFVVIMDADL-SHHPKYLPSFIKK 116
           +    R++ R +     P + G G A    L  + G  VV +D+DL + HP ++P  +  
Sbjct: 97  VAAGARVVSREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGP 156
Query: 117 QL 118
            L
Sbjct: 157 LL 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	242
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	4e-36
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	1e-29
2bo4_A	397	Mannosylglycerate synthase; catalysis, glycosyltra	1e-19
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	1e-15
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	7e-13
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	1e-15
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	1e-15
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	6e-15
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	1e-13
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	3e-13
3bcv_A	240	Putative glycosyltransferase protein; protein stru	1e-12
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	1e-05
2nxv_A	249	ATP synthase subunits region ORF 6; majastridin, A	8e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Length = 329

 Score =  129 bits (325), Expect = 4e-36
 Identities = 44/222 (19%), Positives = 81/222 (36%), Gaps = 14/222 (6%)

Query: 6   KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
           K     S+++P  +E   I  ++  I   +  +  E+IV+D GS D T+           
Sbjct: 45  KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVV 104

Query: 66  EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD-LSHHPKYLPSFIKKQLETGASI 124
                L   P + G G A    L  + G  VV +D+D ++ HP ++P  +   L      
Sbjct: 105 SREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVH 164

Query: 125 VTGTRYVRSGGVHGWNL--MRKLTSRGANVLAQTLLWP------GVSDLTGSFRLYKKSV 176
           +  + Y R   V             R   ++A+ LL         +    G      + +
Sbjct: 165 LVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLAALRPELGCILQPLGGEYAATREL 224

Query: 177 LEDVISSCVSKGYVFQMEMIVRACRK--GYHIEEVPITFVDR 216
           L  V     + GY  ++ ++V    +     I +V +   + 
Sbjct: 225 LTSV---PFAPGYGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Length = 387

 Score =  113 bits (283), Expect = 1e-29
 Identities = 40/252 (15%), Positives = 77/252 (30%), Gaps = 15/252 (5%)

Query: 1   MEETNKNKNKYSIIIPTYNERLNIALIVYLI--FKHLRDVDFEIIVVDDGSPDGTQEVVK 58
                +     S ++P+ N    +  I+  I        +  +I+VVD  S DGT  V  
Sbjct: 86  ARRKRELGLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAA 145

Query: 59  QL-QQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSH-HPKYLPSFIKK 116
               ++Y E+ ++        G G A    L    G  V+ +DAD     P+     +  
Sbjct: 146 SHGAEVYSENELMSG-YGDAHGKGDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGP 204

Query: 117 QLETGASIVTGTRYVRS---GGVHGWNLMRKLTSRGANVLAQTLL--WPGVSDLTGSFRL 171
            LE          Y R    G     +   ++T   A  L         G         +
Sbjct: 205 VLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLFYPELAGFVQPLAGEFV 264

Query: 172 YKKSVLEDVISSCVSKGYVFQMEMIVRACRKG--YHIEEVPITFVDRVFGSSKLGGSEIV 229
             + +   +       GY  +  +++   +K     + +V +          +       
Sbjct: 265 ADRELFCSIPFLT---GYAVETGIMIDVLKKVGLGAMAQVDLGERQNRHQHLRDLSRMSY 321

Query: 230 EYLKGLLYLLIT 241
             ++ +   L  
Sbjct: 322 AVVRAVARRLRQ 333

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Length = 397

 Score = 86.0 bits (212), Expect = 1e-19
 Identities = 28/215 (13%), Positives = 64/215 (29%), Gaps = 21/215 (9%)

Query: 12  SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQ----LQQLYGED 67
            ++ P  +E   +  +++ +           ++      D T E V++    + +  G  
Sbjct: 3   LVVFPFKHEHPEV--LLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTP 60

Query: 68  RILLRPR---PKKLGLGTAYIHGL----KHASGSFVVIMDADL-SHHPKYLPSFIKKQLE 119
             +         + G G      L    +      +   DAD+ S  P ++     +  +
Sbjct: 61  VSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAE-EAAD 119

Query: 120 TGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED 179
            G  +V    + R+       +   +T  G  +L        +    G   L ++ V   
Sbjct: 120 FGYGLVRH-YFPRASTDAM--ITWMITRTGFALLWPHTELSWIEQPLGGELLMRREVAAM 176

Query: 180 VISSCV---SKGYVFQMEMIVRACRKGYHIEEVPI 211
           +           +           ++G  I E  I
Sbjct: 177 LYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYI 211

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625

 Score = 75.0 bits (184), Expect = 1e-15
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 4/130 (3%)

Query: 2   EETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQ 61
                  +  SI+IPTYN    +A+ +  +       D+E+IV DDGS +  +E+V++ +
Sbjct: 86  PRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFE 145

Query: 62  QLYGEDRILLRPRPKK-LGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET 120
                  I    +      L      GL+ A  ++V I+D D++ +P ++ S+++     
Sbjct: 146 S---LLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVD 202

Query: 121 GASIVTGTRY 130
               + G R 
Sbjct: 203 DNVALIGPRK 212

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625

 Score = 66.5 bits (162), Expect = 7e-13
 Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 48/229 (20%)

Query: 1   MEETNKNKNKYSIIIPTYN--ERLNIAL--IVYLIFKHLRDVDFEIIVVDDGSPDGTQEV 56
              T K     SI IP YN  + +   +   +          D E+ + DDGS D T  +
Sbjct: 367 ESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTIT-----DLEVCICDDGSTDDTLRI 421

Query: 57  VKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD-LSHHPKYLPSFIK 115
           +++    +   R+      K  G+G+A    ++   G ++  +D+D         P  ++
Sbjct: 422 LQEHYANH--PRVRFI-SQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLE-----PDAVE 473

Query: 116 KQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSD-------LTGS 168
             L+         + +    V+     R +   G N+++    WP  S        +   
Sbjct: 474 LCLDEFR------KDLSLACVYTT--NRNIDREG-NLISNGYNWPIYSREKLTSAMICHH 524

Query: 169 FRLYKKSVLEDVISSCVSKGY-----VFQ-MEMIVRACRKG--YHIEEV 209
           FR++              +G+          +M ++    G   HI ++
Sbjct: 525 FRMFTARAWNLT------EGFNESISNAVDYDMYLKLSEVGPFKHINKI 567

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Length = 255

 Score = 72.8 bits (179), Expect = 1e-15
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 34/125 (27%)

Query: 12  SIIIPTYN-ERLNIALIVYLI----------FKHLRDVDFEIIVVDDGSPDGTQEVVKQL 60
           S+I+ +YN          Y+           F      DFE+ ++DD S + T  V++  
Sbjct: 4   SVIMTSYNKSD-------YVAKSISSILSQTFS-----DFELFIMDDNSNEETLNVIRPF 51

Query: 61  QQ-----LYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD-LSHHPKYLPSFI 114
                   Y  D   ++ R +K          ++ A G ++     D +       P  +
Sbjct: 52  LNDNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYM-----PDRL 106

Query: 115 KKQLE 119
            K + 
Sbjct: 107 LKMVR 111

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Length = 729

 Score = 74.6 bits (183), Expect = 1e-15
 Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 14/175 (8%)

Query: 9   NKYSIIIPTYN--ERLNIAL--IVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY 64
           NK +II+  YN  E +   L  I     +     DF +I+V+DGS D +++++ +  + Y
Sbjct: 2   NKLTIIVTYYNAEEYITGCLESIKQQRTQ-----DFNLIIVNDGSTDQSKKLMDEAIKDY 56

Query: 65  GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
            +  I      +  G   A    L+     + + +DAD       +  +++K   T   I
Sbjct: 57  -DKNIRFIDLDENSGHAHARNIALEEVETPYFMFLDADDELASYAITFYLEKFNNTDGLI 115

Query: 125 VTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED 179
                +             ++    A     + L    +       +++ +++  
Sbjct: 116 APIHSFTTQRPQFVDLDRVRVEYFNAKENINSFLRKQSA----CNIIFRTAIVRA 166

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472

 Score = 72.5 bits (177), Expect = 6e-15
 Identities = 38/232 (16%), Positives = 83/232 (35%), Gaps = 25/232 (10%)

Query: 12  SIIIPTYNERLNIAL--IVYLIFKHLRDVDFEIIVVDDGSPDG--TQEVVKQLQQLYGED 67
           S++I  +NE  +  L  +  +I +  R +  EI++VDD S      + +   +++L    
Sbjct: 32  SVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPV 91

Query: 68  RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
            ++     ++ GL  A + G   + G  +  +DA       +L   + +      ++V  
Sbjct: 92  HVI--RMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCP 149

Query: 128 T---------RYVRSG----GVHGWNLMRK---LTSRGANVLAQTLLWPGVSD-LTGSFR 170
                      Y+       G   W L  +   +  R  +        P  +  + G   
Sbjct: 150 IIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLF 209

Query: 171 LYKKSVLEDV--ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGS 220
              +   +++    + +       +E+  R  + G  +E V  + V  VF  
Sbjct: 210 SIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRK 261

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501

 Score = 68.6 bits (167), Expect = 1e-13
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 26/231 (11%)

Query: 12  SIIIPTYNERLNIAL--IVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
           S++I  +NE  +  L  +V ++ K    +  EII+VDD S          L     + R+
Sbjct: 69  SVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYS---NDPEDGALLGKIEKVRV 125

Query: 70  LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGT- 128
           L     ++ GL  + + G   A    +  +D+    +  +L   +++  E    +V+   
Sbjct: 126 L--RNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPII 183

Query: 129 --------RYVRSGGVH----GWNLMRK---LTSRGANVLAQTLLWPG-VSDLTGSFRLY 172
                   +YV +         WNL+ K   +T           + P     + G   + 
Sbjct: 184 DVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVM 243

Query: 173 KKSVLEDV--ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSS 221
            K   E++      +       +E+  R  + G  +E +P + V  VF   
Sbjct: 244 DKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQ 294

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570

 Score = 67.6 bits (164), Expect = 3e-13
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 19/150 (12%)

Query: 12  SIIIPTYNERLNIAL--IVYLIFKHLRDVDFEIIVVDDGSPDGT-QEVVKQLQQLYGEDR 68
           SIIIP +NE  +  L  +  ++ +   ++  EI++VDD S     ++ ++    L+   R
Sbjct: 115 SIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVR 174

Query: 69  ILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGT 128
           IL     K+ GL    + G   A+G  +  +D+    +  +LP  + +      +IV   
Sbjct: 175 IL--RTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPM 232

Query: 129 ---------RYVRSG-----GVHGWNLMRK 144
                    RY         G   W +  K
Sbjct: 233 IDVIDHDDFRYETQAGDAMRGAFDWEMYYK 262

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Length = 240

 Score = 64.2 bits (157), Expect = 1e-12
 Identities = 41/201 (20%), Positives = 69/201 (34%), Gaps = 52/201 (25%)

Query: 10  KYSIIIPTYN-ERLNIALIVYLIFKHLRD----------VDFEIIVVDDGSPDGTQEVVK 58
           K S+I+P YN E            K+L             D EII++DD SPD   ++  
Sbjct: 6   KVSVIVPIYNVE------------KYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICD 53

Query: 59  QLQQLYGEDRILLRPRPKKL------GLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPS 112
                Y    I       K+      GLG A   GL  A+G +V   D+D         +
Sbjct: 54  DYAAQY--PNI-------KVIHKKNAGLGMACNSGLDVATGEYVAFCDSDDYVDSDMYMT 104

Query: 113 FIKKQLETGASIV-TGTRYVRSGGVHGWNLMRKLTSRG-----------ANVLAQTLLWP 160
                 +     V TG + +   G+    +  +   +             +++A      
Sbjct: 105 MYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAR 164

Query: 161 GVSDLTGSF--RLYKKSVLED 179
               +  S    LY+++++E 
Sbjct: 165 EERAIQVSAKVVLYRRNLIEK 185

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Length = 657

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 36/259 (13%), Positives = 66/259 (25%), Gaps = 35/259 (13%)

Query: 6   KNKNKYSIIIPTYN--ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL 63
                 ++ IPT+N       AL        +  V   +IV D G               
Sbjct: 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAA 236

Query: 64  YGEDRILLRPRPKKLGLG---TAYIHGLKHASGSFVVIMDAD--------------LSHH 106
               R+ +  +P   G G         LK+     ++ MD D                  
Sbjct: 237 RLGSRLSIHDQPNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFA 296

Query: 107 P-------KYLPSFIKKQLETGASIVT--GTRYVRSGGVHGWNLMRKLTSRGANVLAQTL 157
                   + L       L     +V      +  +      +   +      N  ++ L
Sbjct: 297 KAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLL 356

Query: 158 LWPGVSD-LTGSFRLYKKSVLEDVISSCVSKGYVFQMEMI---VRACRKGYHIEEVPITF 213
                 D       +  + V E++           + +     +RA   GY    +P   
Sbjct: 357 HRRIDVDYNGWWTCMIPRQVAEELG---QPLPLFIKWDDADYGLRAAEHGYPTVTLPGAA 413

Query: 214 VDRVFGSSKLGGSEIVEYL 232
           +  +  S K    +   Y 
Sbjct: 414 IWHMAWSDKDDAIDWQAYF 432

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Length = 249

 Score = 41.6 bits (97), Expect = 8e-05
 Identities = 20/229 (8%), Positives = 57/229 (24%), Gaps = 34/229 (14%)

Query: 1   MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQL 60
           +++ +++   +S+     ++     L+             E +  D+   +         
Sbjct: 8   VQDKDESTLMFSVCSLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ-------- 59

Query: 61  QQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDAD---LSHHPKYLPSFIKKQ 117
                                + +   L    G +V+    D   +      L + I+  
Sbjct: 60  -----------------FHGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEAL 102

Query: 118 LET----GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYK 173
            E       + V G+ +           +      G +     +    V  L   F L +
Sbjct: 103 EEADPKWLVAGVAGSPWRPLNHSVTAQALHISDVFGNDRRRGNVPCR-VESLDECFLLMR 161

Query: 174 KSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSK 222
           +              + +  ++ ++A   G     +           + 
Sbjct: 162 RLKPVLNSYDM-QGFHYYGADLCLQAEFLGGRAYAIDFHLHHYGRAIAD 209

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 1e-04
 Identities = 46/290 (15%), Positives = 85/290 (29%), Gaps = 102/290 (35%)

Query: 3   ETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEII---VVDD--GSPDGTQ--- 54
           ET +++ +Y  I+  + +    A +     K ++D+   I+    +D    S D      
Sbjct: 10  ETGEHQYQYKDILSVFED----AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65

Query: 55  -----------EVVKQ-----LQQLYG--EDRILLRPRPKKLGLGTAYIHGLKHASGSFV 96
                      E+V++     L+  Y      I    R   +     YI           
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT-RMYIEQRDRLYNDNQ 124

Query: 97  VIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQT 156
           V    ++S    YL      +L      +   + V    + G   +              
Sbjct: 125 VFAKYNVSRLQPYL------KLRQALLELRPAKNV---LIDG---V-------------- 158

Query: 157 LLWPGVSDLTGSFRLYKKSVLEDVISSCVSK-------GYVF------------QMEMIV 197
               G    +G      K+ +   +  C+S          +F             +EM+ 
Sbjct: 159 ---LG----SG------KTWV--ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 198 RACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLL----Y---LLI 240
           +     Y I+    +  D    + KL    I   L+ LL    Y   LL+
Sbjct: 204 KLL---YQIDPNWTSRSDHSS-NIKLRIHSIQAELRRLLKSKPYENCLLV 249

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	242
3bcv_A	240	Putative glycosyltransferase protein; protein stru	100.0
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	100.0
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	100.0
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	100.0
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	100.0
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	99.98
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	99.98
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	99.98
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.97
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.97
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	99.97
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	99.97
2bo4_A	397	Mannosylglycerate synthase; catalysis, glycosyltra	99.94
2nxv_A	249	ATP synthase subunits region ORF 6; majastridin, A	99.93
2fy7_A	287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	99.88
2zu9_A	394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	99.82
2wvl_A	391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	99.74
1fo8_A	343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	99.4
3lw6_A	287	FI08434P, beta-4-galactosyltransferase 7; protein-	98.71
2c0n_A	203	A197; thermophil protein, thermophilic virus, STIV	98.58
3cu0_A	281	Galactosylgalactosylxylosylprotein 3-beta- glucuro	97.83
1v84_A	253	Galactosylgalactosylxylosylprotein 3-beta- glucuro	97.76
2d0j_A	246	Galactosylgalactosylxylosylprotein 3-beta- glucuro	97.73
3k8d_A	264	3-deoxy-manno-octulosonate cytidylyltransferase; K	97.63
3oam_A	252	3-deoxy-manno-octulosonate cytidylyltransferase; c	97.1
3tqd_A	256	3-deoxy-manno-octulosonate cytidylyltransferase; c	96.86
1omz_A	293	Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro	96.67
1qwj_A	229	Cytidine monophospho-N-acetylneuraminic acid synth	96.38
3st8_A	501	Bifunctional protein GLMU; acetyltransferase, pyro	96.17
1h7e_A	245	3-deoxy-manno-octulosonate cytidylyltransferase; n	96.07
1e5k_A	201	Molybdopterin-guanine dinucleotide biosynthesis pr	95.94
3ngw_A	208	Molybdopterin-guanine dinucleotide biosynthesis P	95.94
1ezi_A	228	CMP-N-acetylneuraminic acid synthetase; homodimer,	95.87
3juk_A	281	UDP-glucose pyrophosphorylase (GALU); transfer; HE	95.63
1vgw_A	231	4-diphosphocytidyl-2C-methyl-D-erythritol synthas;	95.51
4ecm_A	269	Glucose-1-phosphate thymidylyltransferase; HET: DA	95.23
2wee_A	197	MOBA-related protein; unknown function; 1.65A {Myc	95.2
2waw_A	199	MOBA relate protein; unknown function; HET: PGE; 1	95.17
3tzt_A	276	Glycosyl transferase family 8; structural genomics	95.05
2y6p_A	234	3-deoxy-manno-octulosonate cytidylyltransferase; l	94.9
1i52_A	236	4-diphosphocytidyl-2-C-methylerythritol synthase;	94.74
3d5n_A	197	Q97W15_sulso; NESG, SSR125, structural genomics, P	94.36
4fce_A	459	Bifunctional protein GLMU; GLMU. csgid, niaid, str	94.33
2ux8_A	297	Glucose-1-phosphate uridylyltransferase; UGPG, GAL	93.96
4fcu_A	253	3-deoxy-manno-octulosonate cytidylyltransferase; s	93.91
2qh5_A	308	PMI, ALGA, mannose-6-phosphate isomerase; structur	93.83
2e3d_A	302	UTP--glucose-1-phosphate uridylyltransferase; UDP-	93.69
1vic_A	262	3-deoxy-manno-octulosonate cytidylyltransferase; s	93.54
1fxo_A	293	Glucose-1-phosphate thymidylyltransferase; rhamnos	93.53
3pnn_A	303	Conserved domain protein; structural genomics, PSI	93.49
1lvw_A	295	Glucose-1-phosphate thymidylyltransferase; protein	93.09
1hm9_A	468	GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr	93.05
2dpw_A	232	Hypothetical protein TTHA0179; transferase, struct	92.64
2v0h_A	456	Bifunctional protein GLMU; cell WALL, magnesium, c	92.07
1mc3_A	296	Glucose-1-phosphate thymidylyltransferase; glucose	92.0
3f1c_A	246	Putative 2-C-methyl-D-erythritol 4-phosphate cytid	91.5
2pa4_A	323	UTP-glucose-1-phosphate uridylyltransferase; phosp	90.59
2xwl_A	223	2-C-methyl-D-erythritol 4-phosphate cytidylyltran;	90.49
2yc3_A	228	2-C-methyl-D-erythritol 4-phosphate cytidylyltran	90.41
1w55_A	371	ISPD/ISPF bifunctional enzyme; biosynthetic pathwa	90.36
2vsh_A	236	TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly	90.34
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	90.01
3rsb_A	196	Adenosylcobinamide-phosphate guanylyltransferase;	89.86
3brk_X	420	Glucose-1-phosphate adenylyltransferase; ADP-gluco	89.68
2e8b_A	201	Probable molybdopterin-guanine dinucleotide biosy	89.59
3q80_A	231	2-C-methyl-D-erythritol 4-phosphate cytidyltransf;	88.4
1yp2_A	451	Glucose-1-phosphate adenylyltransferase small subu	88.07
1tzf_A	259	Glucose-1-phosphate cytidylyltransferase; nucleoti	87.66
4evw_A	255	Nucleoside-diphosphate-sugar pyrophosphorylase; st	85.68
1g9r_A	311	Glycosyl transferase; alpha-beta structure; HET: U	81.71
2xme_A	232	CTP-inositol-1-phosphate cytidylyltransferase; CDP	80.54
2i5e_A	211	Hypothetical protein MM_2497; APC86122, methanosar	80.5
1ll2_A	333	Glycogenin-1; protein-substrate complex, beta-alph	80.29

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=100.00  E-value=6.7e-37  Score=234.11  Aligned_cols=208  Identities=20%  Similarity=0.207  Sum_probs=150.7

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      ..+|+||||||+||+++.|.+||+|+.+|+. +++|||||||||+|+|.++++++.+.++  ++++++ .+|.|.+.|+|
T Consensus         2 ~~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~-~~~eiIvvDd~S~d~t~~~~~~~~~~~~--~i~~i~-~~n~G~~~a~N   77 (240)
T 3bcv_A            2 SLIPKVSVIVPIYNVEKYLDQCVQALLAQTL-SDIEIILIDDESPDNCPKICDDYAAQYP--NIKVIH-KKNAGLGMACN   77 (240)
T ss_dssp             -CCCSEEEEEEESSCTTTHHHHHHHHHTCSS-SSEEEEEEECCCSSSHHHHHHHHHHHCS--SEEEEE-CCCCCHHHHHH
T ss_pred             CCCCcEEEEEecCCCHHHHHHHHHHHHhCcC-CCeEEEEEECCCCcCHHHHHHHHHhhCC--CEEEEE-CCCCChHHHHH
Confidence            3468999999999999999999999999976 5899999999999999999999988866  688887 46999999999


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCcc---C-------chhhHHHHHhHHHHHHH
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVH---G-------WNLMRKLTSRGANVLAQ  155 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~  155 (242)
                      .|++.|+|+||+|+|+|+.++|++|+.+++.+++++.+++++..........   .       ......  ...... ..
T Consensus        78 ~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~  154 (240)
T 3bcv_A           78 SGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNK--NEIHTL-LK  154 (240)
T ss_dssp             HHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSH--HHHHHH-HG
T ss_pred             HHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCH--HHHHHH-HH
Confidence            9999999999999999999999999999999987788888765433221110   0       000000  000011 11


Q ss_pred             HHhCCC-------ccccccchhhcchHHHHHhh-hcccCC-CcccchHHHHHHHHcCCceEEeeeeeee-ccCCC
Q 026146          156 TLLWPG-------VSDLTGSFRLYKKSVLEDVI-SSCVSK-GYVFQMEMIVRACRKGYHIEEVPITFVD-RVFGS  220 (242)
Q Consensus       156 ~~~~~~-------~~~~~g~~~~~rr~~~~~~~-~~~~~~-~~~~d~~~~~~~~~~g~~i~~~p~~~~~-~~~~~  220 (242)
                      ......       .....++++++||++++++| +|++.. .++||++|++|+.+.|+++.++|....+ |.++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~yr~~~~  229 (240)
T 3bcv_A          155 DLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYNYRTNPI  229 (240)
T ss_dssp             GGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-----------
T ss_pred             HHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEEEEeCCC
Confidence            111111       11234677799999999998 787654 3579999999999999999999976654 44433

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=100.00  E-value=8.4e-35  Score=224.44  Aligned_cols=195  Identities=15%  Similarity=0.169  Sum_probs=154.7

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--------CCcch
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--------KKLGL   80 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--------~~~g~   80 (242)
                      |+||||||+||+++.|.++|+|+.+|+. +++|||||||||+|+|.++++++.+ .  .+++++..+        +|.|.
T Consensus         1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~-~~~eiivvDd~S~d~t~~~~~~~~~-~--~~i~~i~~~~~~~~~~~~n~G~   76 (255)
T 1qg8_A            1 PKVSVIMTSYNKSDYVAKSISSILSQTF-SDFELFIMDDNSNEETLNVIRPFLN-D--NRVRFYQSDISGVKERTEKTRY   76 (255)
T ss_dssp             CCEEEEEEESSCTTTHHHHHHHHHTCSC-CCEEEEEEECSCCHHHHHHHGGGGG-S--TTEEEEECCCCSHHHHHSSCHH
T ss_pred             CeEEEEEEcCCCHHHHHHHHHHHHhccC-CceEEEEEECCCCchHHHHHHHHhh-c--CCEEEEecccccccccccccCH
Confidence            5799999999999999999999999976 5899999999999999999998765 2  479999988        89999


Q ss_pred             HHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhc-CCcEEEEEEEee--cCCcc-CchhhHHHHHhHHHHHHHH
Q 026146           81 GTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET-GASIVTGTRYVR--SGGVH-GWNLMRKLTSRGANVLAQT  156 (242)
Q Consensus        81 ~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~  156 (242)
                      +.|+|.|++.|+|+||+|+|+|+.++|++++.+++.+++. +++++.+.....  +.... .........         .
T Consensus        77 ~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~  147 (255)
T 1qg8_A           77 AALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAA---------Q  147 (255)
T ss_dssp             HHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCC---------S
T ss_pred             HHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchH---------H
Confidence            9999999999999999999999999999999999999865 788888765543  22100 000000000         0


Q ss_pred             HhCCCccccccchhhcchHHHHHhh-hc------ccCCCcccchHHHHHHHHcCCceEEeeeeeeecc
Q 026146          157 LLWPGVSDLTGSFRLYKKSVLEDVI-SS------CVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRV  217 (242)
Q Consensus       157 ~~~~~~~~~~g~~~~~rr~~~~~~~-~~------~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~  217 (242)
                      ..........++++++||++++++| +|      .+...++||++|+.++.+.| ++.++|...+++.
T Consensus       148 ~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r  214 (255)
T 1qg8_A          148 VTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNY  214 (255)
T ss_dssp             CBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEE
T ss_pred             HHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEE
Confidence            0112234466788899999999998 77      56667789999999999887 7999997765433

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=100.00  E-value=2.2e-33  Score=234.52  Aligned_cols=215  Identities=16%  Similarity=0.172  Sum_probs=162.9

Q ss_pred             CCCCcEEEEEeCcccc-ccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCC-hHHHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146            6 KNKNKYSIIIPTYNER-LNIALIVYLIFKHLRDV-DFEIIVVDDGSPDG-TQEVVKQLQQLYGEDRILLRPRPKKLGLGT   82 (242)
Q Consensus         6 ~~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~-t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~   82 (242)
                      ..+|+||||||+||++ +.|.++|+|+.+|+.+. .+|||||||+|+|+ |.++++++.+.++ .++++++.++|.|++.
T Consensus        26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~-~~v~vi~~~~n~G~~~  104 (472)
T 1xhb_A           26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK-VPVHVIRMEQRSGLIR  104 (472)
T ss_dssp             SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS-SCEEEEECSSCCCHHH
T ss_pred             cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCC-CcEEEEECCCCCChHH
Confidence            3578999999999999 99999999999997642 37999999999995 9999999887654 2699999999999999


Q ss_pred             HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccC-------------chhhHHHHHhH
Q 026146           83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHG-------------WNLMRKLTSRG  149 (242)
Q Consensus        83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~-------------~~~~~~~~~~~  149 (242)
                      |+|.|++.|++|||+|+|+|++++|+||+.+++.+++++..++++.....+.+...             +..........
T Consensus       105 a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (472)
T 1xhb_A          105 ARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVP  184 (472)
T ss_dssp             HHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECC
T ss_pred             HHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCC
Confidence            99999999999999999999999999999999999876666666544332221110             00000000000


Q ss_pred             HHHHHHHH----hCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeeeeeccCCCc
Q 026146          150 ANVLAQTL----LWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITFVDRVFGSS  221 (242)
Q Consensus       150 ~~~~~~~~----~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s  221 (242)
                      ........    .........|++++++|++|+++|+|++....  +||.||++|+.+.|+++.++|.+.++|..+.+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~  262 (472)
T 1xhb_A          185 QREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA  262 (472)
T ss_dssp             HHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred             HHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence            00000000    01224457788889999999999999876553  79999999999999999999998888776655

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=100.00  E-value=1.6e-33  Score=239.55  Aligned_cols=211  Identities=16%  Similarity=0.157  Sum_probs=160.1

Q ss_pred             CCCCcEEEEEeCcccc-ccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCCh-HHHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146            6 KNKNKYSIIIPTYNER-LNIALIVYLIFKHLRDV-DFEIIVVDDGSPDGT-QEVVKQLQQLYGEDRILLRPRPKKLGLGT   82 (242)
Q Consensus         6 ~~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t-~~~l~~~~~~~~~~~~~~~~~~~~~g~~~   82 (242)
                      ..+|+||||||+||++ +.|.++|+|+.+|+... .+|||||||+|+|+| .++++++.+.++  ++++++.++|.|++.
T Consensus       109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~--~v~vi~~~~n~G~~~  186 (570)
T 2d7i_A          109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP--SVRILRTKKREGLIR  186 (570)
T ss_dssp             SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST--TEEEEECSSCCCHHH
T ss_pred             CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC--eEEEEECCCCCCHHH
Confidence            3578999999999998 99999999999997642 359999999999999 899999887764  799999999999999


Q ss_pred             HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEe-ecCCccCchh-----hHHHHHhH--HHH--
Q 026146           83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYV-RSGGVHGWNL-----MRKLTSRG--ANV--  152 (242)
Q Consensus        83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~-~~~~~~~~~~-----~~~~~~~~--~~~--  152 (242)
                      |+|.|++.|++|||+|+|+|++++|+||+.+++.+.+++.. ++++... .+........     ........  ...  
T Consensus       187 A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (570)
T 2d7i_A          187 TRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIP  265 (570)
T ss_dssp             HHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEEC
T ss_pred             HHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCcccccccccccccccc
Confidence            99999999999999999999999999999999999875544 4444332 2221100000     00000000  000  


Q ss_pred             ------HHHHHhCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeeeeeccCC
Q 026146          153 ------LAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITFVDRVFG  219 (242)
Q Consensus       153 ------~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~  219 (242)
                            ..............|+++++||++|+++|+|++....  +||+||++|+.+.|+++.++|.+.++|.+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r  340 (570)
T 2d7i_A          266 IPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYR  340 (570)
T ss_dssp             CCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCC
T ss_pred             cchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcc
Confidence                  0000001123456789999999999999999775544  799999999999999999999988877543

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=100.00  E-value=2.7e-32  Score=229.34  Aligned_cols=208  Identities=18%  Similarity=0.188  Sum_probs=155.2

Q ss_pred             CCCCcEEEEEeCccccc-cHHHHHHHHHhhhcCC-CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHH
Q 026146            6 KNKNKYSIIIPTYNERL-NIALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTA   83 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~-~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a   83 (242)
                      ..+|+||||||+||+++ .|.++|+|+.+|+... .+|||||||||+|+|.+.+   .+..+  ++++++.++|.|++.|
T Consensus        63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---~~~~~--~v~vi~~~~n~G~~~A  137 (501)
T 2ffu_A           63 VDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---LGKIE--KVRVLRNDRREGLMRS  137 (501)
T ss_dssp             SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG---GGGBT--TEEEEECSSCCHHHHH
T ss_pred             cCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH---HhcCC--CEEEEECCCCcCHHHH
Confidence            35789999999999987 9999999999997642 3699999999999985432   23333  7999999999999999


Q ss_pred             HHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccC-------------chhhHHHHHhHH
Q 026146           84 YIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHG-------------WNLMRKLTSRGA  150 (242)
Q Consensus        84 ~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~-------------~~~~~~~~~~~~  150 (242)
                      +|.|++.|+||||+|+|+|++++|+||+.+++.+++++.++|.+.....+.....             +...........
T Consensus       138 ~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (501)
T 2ffu_A          138 RVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTP  217 (501)
T ss_dssp             HHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCH
T ss_pred             HHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCH
Confidence            9999999999999999999999999999999999887776666544322211100             000000000000


Q ss_pred             HHHHHH----HhCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeeeeeccC
Q 026146          151 NVLAQT----LLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITFVDRVF  218 (242)
Q Consensus       151 ~~~~~~----~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~~~~~~  218 (242)
                      ......    ..........|++++++|++++++|+|++...+  +||.+|++|+.+.|+++.++|.+.++|.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~  291 (501)
T 2ffu_A          218 EQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF  291 (501)
T ss_dssp             HHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECC
T ss_pred             HHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEc
Confidence            000000    011124456788999999999999999876544  89999999999999999999987776653

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*

Probab=99.98  E-value=2.5e-32  Score=220.71  Aligned_cols=208  Identities=18%  Similarity=0.166  Sum_probs=153.6

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhh--hcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKH--LRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~--~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      .|+||||||+||+++.|.++|+++.++  .....+|||||||||+|+|.++++++........++++..+.|.|++.|+|
T Consensus        93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A~n  172 (387)
T 3f1y_A           93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDAMW  172 (387)
T ss_dssp             TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHHHH
T ss_pred             CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHHHH
Confidence            589999999999999999999999873  232478999999999999999999873321111222445678999999999


Q ss_pred             HHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhc-CCcEEEEEEEeecCC--ccCchhhHHHHHhHHHHHHHHHh--C
Q 026146           86 HGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLET-GASIVTGTRYVRSGG--VHGWNLMRKLTSRGANVLAQTLL--W  159 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~  159 (242)
                      .|++.|++|||+|+|+|+. ++|++|..+++.+.++ +++++.|.+......  ...............+.+.....  .
T Consensus       173 ~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~~~~~l  252 (387)
T 3f1y_A          173 RALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLFYPEL  252 (387)
T ss_dssp             HHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHHHHHHHHCGGG
T ss_pred             HHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhHHHHHHHHhHhh
Confidence            9999999999999999999 8999999999999765 799999976533211  00001111111111122222111  1


Q ss_pred             CCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHH-HHcCCc-eEEeeeeeeeccC
Q 026146          160 PGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRA-CRKGYH-IEEVPITFVDRVF  218 (242)
Q Consensus       160 ~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~-~~~g~~-i~~~p~~~~~~~~  218 (242)
                      .++.+..+|++++||++++++ ++  ..+|++|.+++.++ .+.|++ +..+|....+|.+
T Consensus       253 ~~~~d~~sG~~a~rR~~l~~i-~f--~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~  310 (387)
T 3f1y_A          253 AGFVQPLAGEFVADRELFCSI-PF--LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH  310 (387)
T ss_dssp             TTCSCTTCSCEEEEHHHHTTS-CE--ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred             ccccccccccEEEEHHHHHhC-CC--CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence            246677889999999999999 44  36788899999998 456997 9999999877654

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=99.98  E-value=3.4e-32  Score=233.29  Aligned_cols=214  Identities=15%  Similarity=0.102  Sum_probs=155.9

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCC--hHHHHHHHHHHhCCCcEEEeeCCCCcchH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDG--TQEVVKQLQQLYGEDRILLRPRPKKLGLG   81 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~--t~~~l~~~~~~~~~~~~~~~~~~~~~g~~   81 (242)
                      ...|+||||||+||+.+.|.+||+||.+|+..  ..+|||||||||+|+  +..+.+.+....  .+++++.++ |.|.+
T Consensus       177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~--~~I~vI~~~-N~G~a  253 (657)
T 4fix_A          177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG--SRLSIHDQP-NLGGS  253 (657)
T ss_dssp             CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG--GGEEEEECC-CCHHH
T ss_pred             CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC--CCEEEEECC-CCCHH
Confidence            35689999999999999999999999998652  356999999999984  223333222222  379999988 99999


Q ss_pred             HHHHHHHhhc----CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCc-c-----------CchhhHH-
Q 026146           82 TAYIHGLKHA----SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGV-H-----------GWNLMRK-  144 (242)
Q Consensus        82 ~a~n~g~~~a----~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-~-----------~~~~~~~-  144 (242)
                      +|+|.|++.|    .+|||+|+|+|++++|++|+.+++.++..+...++|+........ .           ...+... 
T Consensus       254 ~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~  333 (657)
T 4fix_A          254 GGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAP  333 (657)
T ss_dssp             HHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECT
T ss_pred             HHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccc
Confidence            9999999998    468999999999999999999999998765555555443322110 0           0000000 


Q ss_pred             -------H----HHhHHHHHHHHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeee
Q 026146          145 -------L----TSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITF  213 (242)
Q Consensus       145 -------~----~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~  213 (242)
                             +    ................+....|+++++||++++++|++++.+.+.||.|||+|+.++|+++.++|.+.
T Consensus       334 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p~a~  413 (657)
T 4fix_A          334 HAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLPGAA  413 (657)
T ss_dssp             TCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             cccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEECCEE
Confidence                   0    00000000111123345667888899999999999998877777899999999999999999999999


Q ss_pred             eeccCCCcc
Q 026146          214 VDRVFGSSK  222 (242)
Q Consensus       214 ~~~~~~~s~  222 (242)
                      ++|..+.+.
T Consensus       414 V~H~~~~~~  422 (657)
T 4fix_A          414 IWHMAWSDK  422 (657)
T ss_dssp             EEECCSSSS
T ss_pred             EEEcCcCcc
Confidence            888655443

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A

Probab=99.98  E-value=6.2e-31  Score=209.80  Aligned_cols=209  Identities=22%  Similarity=0.257  Sum_probs=149.7

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEe-eCCCCcchHHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR-PRPKKLGLGTAY   84 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~-~~~~~~g~~~a~   84 (242)
                      ..+|+||||||+||+++.|.++|+++.+|+....+|||||||||+|+|.++++++..... ..++++ ..+.|.|++.|+
T Consensus        45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~-~~~~~~~~~~~n~G~~~a~  123 (329)
T 3ckj_A           45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVV-SREQALPEVPIRPGKGEAL  123 (329)
T ss_dssp             TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEE-EHHHHCTTSCCCCSHHHHH
T ss_pred             ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhc-cceeeeccCCCCCCHHHHH
Confidence            346899999999999999999999999997544589999999999999999988732210 012222 267899999999


Q ss_pred             HHHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHh-cCCcEEEEEEEeec--CCcc---CchhhHHHHHhHHHHHHHHH
Q 026146           85 IHGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLE-TGASIVTGTRYVRS--GGVH---GWNLMRKLTSRGANVLAQTL  157 (242)
Q Consensus        85 n~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~  157 (242)
                      |.|++.|++|||+|+|+|+. ++|++|+.+++.+.+ +++++++|......  ++..   ...............+....
T Consensus       124 n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (329)
T 3ckj_A          124 WRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLAAL  203 (329)
T ss_dssp             HHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHHHHHHH
T ss_pred             HHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHHHHHHh
Confidence            99999999999999999999 899999999998654 57899998765432  1100   00001111111111111111


Q ss_pred             hC--CCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHH-cCCc-eEEeeeeeeeccC
Q 026146          158 LW--PGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACR-KGYH-IEEVPITFVDRVF  218 (242)
Q Consensus       158 ~~--~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~-~g~~-i~~~p~~~~~~~~  218 (242)
                      ..  ..+....|+++++||+++++++ +  ..+|++|+++++++.+ .|++ +.++|..+..|..
T Consensus       204 ~~~~~~~~~~~~g~~~~rr~~l~~i~-f--~~~~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h~~  265 (329)
T 3ckj_A          204 RPELGCILQPLGGEYAATRELLTSVP-F--APGYGVEIGLLVDTFDRLGLDAIAQVNLGVREHRN  265 (329)
T ss_dssp             CGGGGGCSCTTCSCEEEEHHHHTTSC-B--CCGGGHHHHHHHHHHHHHCGGGEEEEEEEECEECC
T ss_pred             hhhhccccCCCccceeeeHHHHHhCC-C--CCCCcccHHHHHHHHHhcCCccEeeecceEEecCC
Confidence            11  2344566778899999999996 4  3467799999999876 7775 8888887655543

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=99.97  E-value=2.6e-31  Score=229.06  Aligned_cols=202  Identities=17%  Similarity=0.172  Sum_probs=156.8

Q ss_pred             cCCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146            5 NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY   84 (242)
Q Consensus         5 ~~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~   84 (242)
                      +..+|.||||||+||+++.|.++|+|+..|+. +++|||||||||+|+|.++++++.+.++  +++++. .+|.|.+.|+
T Consensus       371 ~~~~~~vsiii~~yn~~~~l~~~l~s~~~q~~-~~~eiivvdd~S~d~t~~~~~~~~~~~~--~i~~~~-~~n~G~~~a~  446 (625)
T 2z86_A          371 LKRVPLVSIYIPAYNCSKYIVRCVESALNQTI-TDLEVCICDDGSTDDTLRILQEHYANHP--RVRFIS-QKNKGIGSAS  446 (625)
T ss_dssp             CCSSCSEEEEEEESSCTTTHHHHHHHHHSSSC-CSEEEEEEEESCSSSHHHHHHHHHTTCT--TEEEEE-ECCCCHHHHH
T ss_pred             hccCCeEEEEEeCCCCHHHHHHHHHHHHhCcC-CCeEEEEEECcCChhHHHHHHHHHhhCC--cEEEEe-CCCCCHHHHH
Confidence            34568999999999999999999999999975 5899999999999999999999877654  688886 6789999999


Q ss_pred             HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccC--chhhHHHHHhHHHHHHHHHhCCC
Q 026146           85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHG--WNLMRKLTSRGANVLAQTLLWPG  161 (242)
Q Consensus        85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  161 (242)
                      |.|++.|+||||+|+|+|+.++|++|+.+++.+++ ++.+++++.....+.....  ..+...  ....    ....   
T Consensus       447 n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~---  517 (625)
T 2z86_A          447 NTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWP--IYSR----EKLT---  517 (625)
T ss_dssp             HHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCS--SCCH----HHHT---
T ss_pred             HHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccc--cCCH----HHHh---
Confidence            99999999999999999999999999999998865 4677777754433221000  000000  0000    0011   


Q ss_pred             ccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeee-ccCCC
Q 026146          162 VSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVD-RVFGS  220 (242)
Q Consensus       162 ~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~-~~~~~  220 (242)
                      .....|++++++|++++++|+|++...+++|++|++|+.+.| ++.++|....+ |.++.
T Consensus       518 ~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~  576 (625)
T 2z86_A          518 SAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGE  576 (625)
T ss_dssp             TSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC--
T ss_pred             hcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCC
Confidence            123456777999999999999988877889999999999999 99999977655 33444

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=99.97  E-value=8.7e-31  Score=225.81  Aligned_cols=214  Identities=21%  Similarity=0.225  Sum_probs=159.6

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHH
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAY   84 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~   84 (242)
                      ..+|+||||||+||+.+.|.++|+++..|.....+|||||||||+|+|.++++++.+.   ..++++..+. +.|++.|+
T Consensus        90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~---~~i~~i~~~~~~~g~~~a~  166 (625)
T 2z86_A           90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESL---LNIKYVRQKDYGYQLCAVR  166 (625)
T ss_dssp             CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTT---SCEEEEEECCCSCCHHHHH
T ss_pred             ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhc---CCeEEEEeCCCCcchhHHH
Confidence            3458999999999999999999999999965458999999999999999999887443   3577777654 34699999


Q ss_pred             HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCch-------hhHH---------HHH-
Q 026146           85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWN-------LMRK---------LTS-  147 (242)
Q Consensus        85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~---------~~~-  147 (242)
                      |.|++.|++|||+|+|+|+.++|++|+.++..+++++..+++|.......+.....       +...         ... 
T Consensus       167 N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (625)
T 2z86_A          167 NLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGK  246 (625)
T ss_dssp             HHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC----------
T ss_pred             HHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhh
Confidence            99999999999999999999999999999999987777777776554433211000       0000         000 


Q ss_pred             --------hHHHHHHHH--H--hCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeee
Q 026146          148 --------RGANVLAQT--L--LWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITF  213 (242)
Q Consensus       148 --------~~~~~~~~~--~--~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~  213 (242)
                              .........  .  .........|+++++||++++++|+|++....  +||.+|++|+.+.|+++.++|.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~  326 (625)
T 2z86_A          247 VEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAM  326 (625)
T ss_dssp             -----CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGGC
T ss_pred             hccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcccch
Confidence                    000000000  0  11123357888999999999999999776644  699999999999999999999877


Q ss_pred             eeccCCCcc
Q 026146          214 VDRVFGSSK  222 (242)
Q Consensus       214 ~~~~~~~s~  222 (242)
                      ++|..+.+.
T Consensus       327 v~H~~~~~~  335 (625)
T 2z86_A          327 AYHQEPPGK  335 (625)
T ss_dssp             EEEECCC--
T ss_pred             hhccCCccc
Confidence            776665543

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=99.97  E-value=3.7e-30  Score=226.18  Aligned_cols=231  Identities=14%  Similarity=0.187  Sum_probs=166.8

Q ss_pred             CCCCcEEEEEeCccccccH-HHHHHHHHhhhcCC-CeEEEEEeCCCCCChH---------------HHHHHHHHHhCCCc
Q 026146            6 KNKNKYSIIIPTYNERLNI-ALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQ---------------EVVKQLQQLYGEDR   68 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l-~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~---------------~~l~~~~~~~~~~~   68 (242)
                      ...|+|||+||+||+++.+ +++++|+.+|.++. .+|||||||||+|+|.               +.++++.+..+   
T Consensus       137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~---  213 (802)
T 4hg6_A          137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELG---  213 (802)
T ss_dssp             TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcC---
Confidence            3468999999999998766 99999999997753 4899999999999883               34555555543   


Q ss_pred             EEEeeCCCC-cchHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHH-hcCCcEEEEEEEeecCCccCchh--hHH
Q 026146           69 ILLRPRPKK-LGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL-ETGASIVTGTRYVRSGGVHGWNL--MRK  144 (242)
Q Consensus        69 ~~~~~~~~~-~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~--~~~  144 (242)
                      +.++..++| .|+++|+|.|++.+++|||+++|+|+.++|+++++++..++ +++.+++.+.....+.+......  ...
T Consensus       214 v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~  293 (802)
T 4hg6_A          214 VVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDR  293 (802)
T ss_dssp             CEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTT
T ss_pred             cEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhh
Confidence            666665555 78999999999999999999999999999999999999996 45677777755544332000000  000


Q ss_pred             ---HHHhHHHHHHHHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCc
Q 026146          145 ---LTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSS  221 (242)
Q Consensus       145 ---~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s  221 (242)
                         ................+.....|+++++||++++++|++.+. .++||.+++.++.+.|+++.++|.+..++..+.+
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~~-~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~p~t  372 (802)
T 4hg6_A          294 CPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGE-TITEDAETALEIHSRGWKSLYIDRAMIAGLQPET  372 (802)
T ss_dssp             SCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCCS-SSSHHHHHHHHHHTTTCCEEECCCCCEEECCCCS
T ss_pred             hhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCcCCC-CcchHHHHHHHHHHcCCeEEEecCCEEEecCCCC
Confidence               000011111111111222335688889999999999988654 4679999999999999999999988887766555


Q ss_pred             ccc-hHHHHHHHHHHHHHhh
Q 026146          222 KLG-GSEIVEYLKGLLYLLI  240 (242)
Q Consensus       222 ~~~-~~~~~~~~~~~~~~~~  240 (242)
                      -.. .++..||.++..+.+.
T Consensus       373 ~~~~~~Qr~RW~~G~~q~l~  392 (802)
T 4hg6_A          373 FASFIQQRGRWATGMMQMLL  392 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccHHHHHH
Confidence            333 3667778777776654

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=99.97  E-value=7.3e-33  Score=242.07  Aligned_cols=202  Identities=13%  Similarity=0.137  Sum_probs=0.0

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHH
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHG   87 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g   87 (242)
                      ||+||||||+||+++.|.+||+|+.+|+. +++|||||||||+|+|.++++++.+.++ .+++++..++|.|.++|+|.|
T Consensus         1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~-~~~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~i~~~~n~G~~~arN~g   78 (729)
T 3l7i_A            1 MNKLTIIVTYYNAEEYITGCLESIKQQRT-QDFNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRFIDLDENSGHAHARNIA   78 (729)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CceEEEEEEcCCCHHHHHHHHHHHHhCCC-CCeEEEEEECCCCCcHHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHH
Confidence            47899999999999999999999999976 5899999999999999999999987754 479999999999999999999


Q ss_pred             HhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCcccccc
Q 026146           88 LKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTG  167 (242)
Q Consensus        88 ~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  167 (242)
                      ++.|+|+||+|+|+|+.+.|++|+.+++.++  +.+++++.......+..............  ..........+....+
T Consensus        79 i~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~--~~d~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  154 (729)
T 3l7i_A           79 LEEVETPYFMFLDADDELASYAITFYLEKFN--NTDGLIAPIHSFTTQRPQFVDLDRVRVEY--FNAKENINSFLRKQSA  154 (729)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHhccCCEEEEECCCCCCChhHHHHHHHHhc--CCCEEEEeeEEeecCCCccccccceeeee--ecchhhHHHHhhccch
Confidence            9999999999999999999999999999997  56666654433222111100000000000  0000001111223456


Q ss_pred             chhhcchHHHHHhh-hcccCCCcccchHHHHHHHHcCCceEEe-eeeeee
Q 026146          168 SFRLYKKSVLEDVI-SSCVSKGYVFQMEMIVRACRKGYHIEEV-PITFVD  215 (242)
Q Consensus       168 ~~~~~rr~~~~~~~-~~~~~~~~~~d~~~~~~~~~~g~~i~~~-p~~~~~  215 (242)
                      +++++||++++++| +|++...++||++|++++...|.++.++ |....+
T Consensus       155 ~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~~  204 (729)
T 3l7i_A          155 CNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFYF  204 (729)
T ss_dssp             --------------------------------------------------
T ss_pred             hheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEEE
Confidence            77899999999998 7888777899999999999999999999 665554

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*

Probab=99.94  E-value=4.3e-25  Score=178.20  Aligned_cols=194  Identities=13%  Similarity=0.092  Sum_probs=136.5

Q ss_pred             EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC---CCcEEEeeCC--C--CcchHHHHH
Q 026146           13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG---EDRILLRPRP--K--KLGLGTAYI   85 (242)
Q Consensus        13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~---~~~~~~~~~~--~--~~g~~~a~n   85 (242)
                      ||||++|  +.+..+++.+......+.+|||||||||+|+|.++++++....+   +.++..+...  +  |.|++.|++
T Consensus         4 VIiP~~e--E~I~~vl~~l~~~~~~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~   81 (397)
T 2bo4_A            4 VVFPFKH--EHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN   81 (397)
T ss_dssp             EEEECCS--SCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHH
T ss_pred             EEEeCCc--cCHHHHHHHHHHhccCCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHH
Confidence            5555544  46999999886432235789999999999999999997665443   3344443322  4  899999999


Q ss_pred             HHH----hhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCC
Q 026146           86 HGL----KHASGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWP  160 (242)
Q Consensus        86 ~g~----~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (242)
                      .|+    +.++||+++++|+|.. .+|+++.++++.+++ ++|+|.|.......+   ......................
T Consensus        82 ~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~---~~~~~~~~~~ll~~~~~~~~~~  157 (397)
T 2bo4_A           82 TALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTD---AMITWMITRTGFALLWPHTELS  157 (397)
T ss_dssp             HHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTS---CHHHHHTHHHHHHHHCTTSSGG
T ss_pred             HHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCC---cHHHHHHHHHHHHHHHHHhhcc
Confidence            999    8899999999999997 899999999998865 699999863322111   1111111111111111100111


Q ss_pred             CccccccchhhcchHHHHHhhhc---ccCCCcccchHHHHHHHHcCCceEEeeee
Q 026146          161 GVSDLTGSFRLYKKSVLEDVISS---CVSKGYVFQMEMIVRACRKGYHIEEVPIT  212 (242)
Q Consensus       161 ~~~~~~g~~~~~rr~~~~~~~~~---~~~~~~~~d~~~~~~~~~~g~~i~~~p~~  212 (242)
                      .+.+..++..+++|++++.+...   ....+|+.|.++..++.+.|+++..+|..
T Consensus       158 ~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig  212 (397)
T 2bo4_A          158 WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP  212 (397)
T ss_dssp             GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred             ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence            45556677889999999998432   24667888999999999999999999965

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*

Probab=99.93  E-value=1.3e-25  Score=172.30  Aligned_cols=177  Identities=9%  Similarity=-0.021  Sum_probs=119.9

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhc-CCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR-DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~-~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      .++.+||| |+||+.+.|.+||+|+.+... +..+|||||||+|+|.                         .|.+.|+|
T Consensus        14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~-------------------------~g~a~a~N   67 (249)
T 2nxv_A           14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ-------------------------FHGFSWHK   67 (249)
T ss_dssp             CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS-------------------------CCTTTHHH
T ss_pred             CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc-------------------------ccHHHHHH
Confidence            45789975 679999999999998876433 2338999999999762                         36789999


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-----cCCcEEEEEEEeecC--CccC-c-hhhHHHHHhHHHHHHHH
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-----TGASIVTGTRYVRSG--GVHG-W-NLMRKLTSRGANVLAQT  156 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-----~~~~~v~~~~~~~~~--~~~~-~-~~~~~~~~~~~~~~~~~  156 (242)
                      .|++.|+|||++|||+|+.++++|++.+++.+++     ++.+ ++|.......  +... . ..............  .
T Consensus        68 ~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg-~vg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~  144 (249)
T 2nxv_A           68 QMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWL-VAGVAGSPWRPLNHSVTAQALHISDVFGNDRRR--G  144 (249)
T ss_dssp             HHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEE-EEESEEEESSCSCTTSCCCEEEEEETTEEEEEE--S
T ss_pred             HHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCee-EEeecccccCCCCceeeecccccCCcccccccc--C
Confidence            9999999999999999999999999999999876     3333 3332221111  1000 0 00000000000000  0


Q ss_pred             HhCCCccccccchhhcchHHHHHhhhcccCC--CcccchHHHHHHHHcCCceEEeeeeeee
Q 026146          157 LLWPGVSDLTGSFRLYKKSVLEDVISSCVSK--GYVFQMEMIVRACRKGYHIEEVPITFVD  215 (242)
Q Consensus       157 ~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~--~~~~d~~~~~~~~~~g~~i~~~p~~~~~  215 (242)
                      .....+..+.|+++++||++   +++|++..  .+.+|.|||+|+.++|+++.++|..+.|
T Consensus       145 ~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~v~H  202 (249)
T 2nxv_A          145 NVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFHLHH  202 (249)
T ss_dssp             CSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCCCEE
T ss_pred             CCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccEEEE
Confidence            01122445678889999999   66776532  2357999999999999999999965443

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...

Probab=99.88  E-value=3.5e-23  Score=160.82  Aligned_cols=159  Identities=16%  Similarity=0.136  Sum_probs=112.4

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHH---hhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIF---KHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTA   83 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~---~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a   83 (242)
                      ..++||||||+||+++.|..+|++|.   +|.. .++|||||||++ |.                        .++++.+
T Consensus        63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~-~~~EIiVVdds~-d~------------------------~f~~a~a  116 (287)
T 2fy7_A           63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQ-LDYGIYVINQAG-DT------------------------IFNRAKL  116 (287)
T ss_dssp             CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT-CEEEEEEEEECS-SS------------------------CCCHHHH
T ss_pred             cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhc-CCceEEEEEeCC-CC------------------------ccchhhh
Confidence            46899999999999999999999998   4533 689999999943 21                        2367889


Q ss_pred             HHHHH----hhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhC
Q 026146           84 YIHGL----KHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLW  159 (242)
Q Consensus        84 ~n~g~----~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (242)
                      +|.|+    +.|++||++|+|+|+++.+++..-.   . ...... .           .. .....           ...
T Consensus       117 ~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~~~---~-~~~p~~-~-----------~~-~~~~~-----------~~~  168 (287)
T 2fy7_A          117 LNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYR---C-FSQPRH-I-----------SV-AMDKF-----------GFS  168 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEEECTTEEESBTTSCCS---C-CSSCEE-C-----------CC-EEGGG-----------TTS
T ss_pred             hhhHHHHHHHhCCCCEEEEECCCcccCCCcceEe---c-CCCCce-E-----------EE-eeccc-----------ccC
Confidence            99999    8899999999999999998862100   0 000000 0           00 00000           011


Q ss_pred             CCccccccchhhcchHHHHHhhhcccCC-Cc-ccchHHHHHHHHcCCceE-----EeeeeeeeccCC
Q 026146          160 PGVSDLTGSFRLYKKSVLEDVISSCVSK-GY-VFQMEMIVRACRKGYHIE-----EVPITFVDRVFG  219 (242)
Q Consensus       160 ~~~~~~~g~~~~~rr~~~~~~~~~~~~~-~~-~~d~~~~~~~~~~g~~i~-----~~p~~~~~~~~~  219 (242)
                      .....+.|++++++|++|+++|||++.+ +| +||.||+.|+.++|+++.     +.+..+++|.+.
T Consensus       169 ~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~  235 (287)
T 2fy7_A          169 LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRD  235 (287)
T ss_dssp             CSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC----
T ss_pred             CCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCC
Confidence            2234567889999999999999997754 45 499999999999999999     455666666554

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*

Probab=99.82  E-value=1e-18  Score=138.99  Aligned_cols=218  Identities=20%  Similarity=0.257  Sum_probs=138.6

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCCh------HHHHHHHHHHhCCCcEEEeeCCC------
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGT------QEVVKQLQQLYGEDRILLRPRPK------   76 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t------~~~l~~~~~~~~~~~~~~~~~~~------   76 (242)
                      .++|||||+||++..+   +..++++.. ..+|||+|||||+|+|      .++++++++..+ ....+++.+.      
T Consensus        51 ~~iSVVIP~yNEE~~l---I~~vL~~i~-~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~-~~~~Vl~~~~p~v~~~  125 (394)
T 2zu9_A           51 GKMAVIVPMKNEKLHL---VDGVLKAIP-HKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTH-SKIIMIHQKDPGLAKA  125 (394)
T ss_dssp             TTEEEEEEESSCCHHH---HHHHHHHSC-TTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHC-CCEEEEETTCHHHHHH
T ss_pred             CCEEEEEecCcccHHH---HHHHHHcCC-CCcEEEEEECcCcccccchhhHHHHHHHHhhccc-cceEEEecCCcchhHH
Confidence            4799999999998543   555555543 3679999999998887      777888777654 3455555443      


Q ss_pred             ----------------CcchHHHHHHHHhhc---CCCEEEEEeCCCCCCCCChHHHHHHHHh------cCCcEE-EEEEE
Q 026146           77 ----------------KLGLGTAYIHGLKHA---SGSFVVIMDADLSHHPKYLPSFIKKQLE------TGASIV-TGTRY  130 (242)
Q Consensus        77 ----------------~~g~~~a~n~g~~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~~~------~~~~~v-~~~~~  130 (242)
                                      +.|++.|+..|+..|   ++|+|+|+|+|. ..|..+..+.+.+..      .++++| .+.+.
T Consensus       126 ~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~aG~~~a~~~~dmVR~~~r~  204 (394)
T 2zu9_A          126 FKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAAGFLMSESEYTMVRLHWRH  204 (394)
T ss_dssp             HHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHHHHHHCCSSSEEEEEECC-
T ss_pred             hhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhhcccccccccceeeecccc
Confidence                            249999999999999   899999999999 556666666665432      357777 43322


Q ss_pred             eecCCc-----cCchhhHHHHHhHHHHHHHHHhCCCcc---ccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHc
Q 026146          131 VRSGGV-----HGWNLMRKLTSRGANVLAQTLLWPGVS---DLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRK  202 (242)
Q Consensus       131 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~  202 (242)
                      ......     ..+.....+.++..+.+.+.+.+....   ...+|..+++|++++.+. +  ..+|+.+.++...+.+.
T Consensus       205 ~~~~~~~rl~~~~~GRv~rl~~r~Ln~L~~~l~g~~~d~~~tplsGe~A~rr~ll~~L~-~--~~gyGvE~~lLv~~~r~  281 (394)
T 2zu9_A          205 KPKVTKGTLYFKKWGRVSEITNHYLNLLVSEHTAFETTIMVTGNAGEHAMTMKLAEILP-F--STGYSIEPYEIVYILER  281 (394)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHSSCCCCCCCTTCSSEEEEHHHHTTCC-E--ESGGGHHHHHHHHHHHH
T ss_pred             ccccccccccccCCCceehhHHHHHHHHHHHhcCccccCcCCCCchhhHhhHHHHhcCC-C--CCCCCCCHHHHHHHHHh
Confidence            211000     122333345555555555555553321   234467899999999872 2  35888888899888887


Q ss_pred             ----------------CCceEEeeeeeeeccCCCcccchHHHHHHHHHHHHH
Q 026146          203 ----------------GYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL  238 (242)
Q Consensus       203 ----------------g~~i~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~~~  238 (242)
                                      |.+|..+... ..|.|...  ....+.+.....+..
T Consensus       282 ~~~~~~~~~~~~~~~~g~~I~qve~~-~pH~H~~~--g~~~l~~M~~~~~~~  330 (394)
T 2zu9_A          282 FGKWENVEEFKDVFDQGIEIFQIETL-NPHFHEDK--GKEHVKEMLLLSLAT  330 (394)
T ss_dssp             HSSCCSCGGGHHHHHHCEEEEEEECS-SCCCBCCC--CHHHHHHHHHHHHHH
T ss_pred             hCccccccccccccccCceEEEEecc-CCcccccc--chhHHHHHHHHHHHH
Confidence                            6677766653 33444322  344444444444443

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*

Probab=99.74  E-value=1.1e-17  Score=129.66  Aligned_cols=147  Identities=20%  Similarity=0.198  Sum_probs=105.8

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCCh---HHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGT---QEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t---~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      +++|||||+||++.   .+++++++|.. .+++||+|||||+|.+   .++++++++... .++.+++ .+|.|.+.|+|
T Consensus        53 ~klSIVVPvYNEe~---~lLesVl~qi~-~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~-~ri~viH-Qkn~gls~Ar~  126 (391)
T 2wvl_A           53 EQTAIVVPTRNERL---KLLEGVLSGIP-HEALILVASNSSPDRFQMERDLLEEFAHLTE-RPALIFH-QKDPALAEALR  126 (391)
T ss_dssp             TTEEEEEEESSCCH---HHHHHHHHTSC-TTSEEEEEECCCHHHHHHHHHHHHHHHHHTT-CCEEEEE-TTCHHHHHHHH
T ss_pred             hceEEEEeccCcHH---HHHHHHHhcCC-CCceEEEEECCCCCChHhHHHHHHHHHhhcc-cceEEEe-ccChHHHHHHH
Confidence            67999999999886   47999999965 5899999999999999   568888887432 4788887 44677777775


Q ss_pred             -----------------------HHHhhc---CCCEEEEEeCCCCCCCCChHHHHHHHH-----hcCCcEE-EEEEEeec
Q 026146           86 -----------------------HGLKHA---SGSFVVIMDADLSHHPKYLPSFIKKQL-----ETGASIV-TGTRYVRS  133 (242)
Q Consensus        86 -----------------------~g~~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~~-----~~~~~~v-~~~~~~~~  133 (242)
                                             .|+..|   .++||.|+|+|+.++.+..+-+.....     ..+.++| ++.+..+.
T Consensus       127 ~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s~~~MVRI~wR~kPK  206 (391)
T 2wvl_A          127 AGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKTPFAMVRILWRYKPK  206 (391)
T ss_dssp             HTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCSSEEEEEEECCCCC-
T ss_pred             hcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCCCcceEEEecccCcc
Confidence                                   367776   699999999998886555444332221     2567777 77666443


Q ss_pred             C------CccCchhhHHHHHhHHHHHHHHHhCCC
Q 026146          134 G------GVHGWNLMRKLTSRGANVLAQTLLWPG  161 (242)
Q Consensus       134 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (242)
                      -      ....++..+...++..+.+.....+..
T Consensus       207 ~~~~~~l~f~k~Grvs~itNr~lN~Lis~~~g~e  240 (391)
T 2wvl_A          207 LTEDEGVVFRRYGRVSERNNRALNQLIGGVSGFE  240 (391)
T ss_dssp             -----CCHHHHTHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cccCCceeEeecCccchhhHHHHHHHHHHhhCcc
Confidence            1      234456666777777787777665543

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*

Probab=99.40  E-value=7.7e-13  Score=104.60  Aligned_cols=111  Identities=14%  Similarity=0.166  Sum_probs=84.4

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee---------CCCCc
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP---------RPKKL   78 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~---------~~~~~   78 (242)
                      +.++|+|++||+.+ +.++|++|.+|... ..++|||.|||+.+++.++++++..     ++..+.         .+.|.
T Consensus         2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~-----~I~~~~~~d~~~~~~~~~N~   75 (343)
T 1fo8_A            2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGS-----AVTHIRQPDLSNIAVQPDHR   75 (343)
T ss_dssp             CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGG-----GSEEEECSCCCCCCCCTTCG
T ss_pred             CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCC-----ceEEEEcCCccccccchhhc
Confidence            45889999999998 99999999999633 4579999999999888888887632     233321         34566


Q ss_pred             chH----------HHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHH--hcCCcEE
Q 026146           79 GLG----------TAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL--ETGASIV  125 (242)
Q Consensus        79 g~~----------~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~--~~~~~~v  125 (242)
                      |..          .|+|.+++.+++++++|+|+|+++.|++++-+.+.+.  +.+..+.
T Consensus        76 g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~  134 (343)
T 1fo8_A           76 KFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW  134 (343)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE
T ss_pred             CcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE
Confidence            643          5677777777899999999999999999977666554  3344443

>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}

Probab=98.71  E-value=1.3e-07  Score=71.43  Aligned_cols=151  Identities=15%  Similarity=0.191  Sum_probs=102.1

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhc--CCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY   84 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~--~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~   84 (242)
                      ...+++||||-+|+++.|...|.-+...+.  +-.+.|+||+...                         ...+..+..+
T Consensus        49 ~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~VieQ~~-------------------------~~~FNRa~Ll  103 (287)
T 3lw6_A           49 SVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVD-------------------------RFRFNRASLI  103 (287)
T ss_dssp             CCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECS-------------------------SSCCCHHHHH
T ss_pred             CcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEEecCC-------------------------CCccchhhee
Confidence            346899999999999999887765543222  2578999998742                         1246788999


Q ss_pred             HHHHhhcC--CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCc
Q 026146           85 IHGLKHAS--GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGV  162 (242)
Q Consensus        85 n~g~~~a~--~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (242)
                      |.|+..|.  .|+++|=|.|.++..+...     ..-++..   +++-. ...                   ........
T Consensus       104 NvGf~ea~~~~d~~ifHDVDLlP~dd~n~-----Y~c~~~~---~P~Hl-s~~-------------------~~~~~~~Y  155 (287)
T 3lw6_A          104 NVGFQFASDVYDYIAMHDVDLLPLNDNLL-----YEYPSSL---GPLHI-AGP-------------------KLHPKYHY  155 (287)
T ss_dssp             HHHHHHSCTTCCEEEEECTTEEECCTTSC-----CCCCCTT---CCEES-SCT-------------------TTCSSCCC
T ss_pred             cccHHHHhccCCEEEEecccccccCCCcc-----ccCCCCC---CceEE-eec-------------------cccCCCCc
Confidence            99999986  6999999999775433211     0000000   00100 000                   00011234


Q ss_pred             cccccchhhcchHHHHHhhhccc-CCCc-ccchHHHHHHHHcCCceEEee
Q 026146          163 SDLTGSFRLYKKSVLEDVISSCV-SKGY-VFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       163 ~~~~g~~~~~rr~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      ....||.++++++.+.+++||.+ ..+| +||.||..|+..+|+++...+
T Consensus       156 ~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~  205 (287)
T 3lw6_A          156 DNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQ  205 (287)
T ss_dssp             TTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCS
T ss_pred             CCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCC
Confidence            45678999999999999999865 4455 689999999999999998775

>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}

Probab=98.58  E-value=5.8e-09  Score=74.16  Aligned_cols=114  Identities=12%  Similarity=0.163  Sum_probs=77.0

Q ss_pred             hHHHHHHHHhh----cCCCEEEEEeCC---CCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHH
Q 026146           80 LGTAYIHGLKH----ASGSFVVIMDAD---LSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANV  152 (242)
Q Consensus        80 ~~~a~n~g~~~----a~~d~i~~lD~D---~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (242)
                      ...|||..+..    ...|+++|+|+|   ...+|+.+.+++    +.+.|+|.|.+......  ..+..       .+.
T Consensus        37 I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV~GsYp~K~~~--~~s~~-------a~~  103 (203)
T 2c0n_A           37 VAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVVCGYYYLKTLR--GYSVY-------RKD  103 (203)
T ss_dssp             HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEEEEECBCTTSS--SBSEE-------SSS
T ss_pred             hHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEEEEEeeccCCC--ccchH-------HHH
Confidence            45566655554    457999999999   889999998888    35899999988775422  10000       000


Q ss_pred             HHHHHhCCCccccccchhhcchHHHHHhh-hcc-------cCCCcccchHHHHHHHHcCCce
Q 026146          153 LAQTLLWPGVSDLTGSFRLYKKSVLEDVI-SSC-------VSKGYVFQMEMIVRACRKGYHI  206 (242)
Q Consensus       153 ~~~~~~~~~~~~~~g~~~~~rr~~~~~~~-~~~-------~~~~~~~d~~~~~~~~~~g~~i  206 (242)
                      ......+..+.+..+|+++++|++++++- .+.       .....+||..||..+...|+-+
T Consensus       104 y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~  165 (203)
T 2c0n_A          104 WEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL  165 (203)
T ss_dssp             BCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred             HHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence            01112233677888999999999999981 111       2345688999999999888776

>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*

Probab=97.83  E-value=9e-05  Score=55.85  Aligned_cols=101  Identities=11%  Similarity=0.021  Sum_probs=64.6

Q ss_pred             CCCCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCC--CCChHHHHHHHHHHhCCCcEEEeeCCCCc----
Q 026146            6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGS--PDGTQEVVKQLQQLYGEDRILLRPRPKKL----   78 (242)
Q Consensus         6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s--~d~t~~~l~~~~~~~~~~~~~~~~~~~~~----   78 (242)
                      ...|.|-||.|||.+.....+ |..|.+.+.. +++.+|||+|+.  ++.+.++|++.     +...+++..+.+.    
T Consensus        18 ~~~p~IivVTPTy~R~~Q~a~-LtRLa~TL~~Vp~L~WIVVEd~~~~t~~va~lL~rs-----Gl~y~HL~~~~p~~~~~   91 (281)
T 3cu0_A           18 GSHMTIYVVTPTYARLVQKAE-LVRLSQTLSLVPRLHWLLVEDAEGPTPLVSGLLAAS-----GLLFTHLVVLTPKAQRL   91 (281)
T ss_dssp             ---CEEEEEEEECCSTTHHHH-HHHHHHHHTTSSSEEEEEEESSSSCCHHHHHHHHHH-----CSEEEEEECCCC-----
T ss_pred             CCCCeEEEEeCCCCCcchhHH-HHHHHHHHhcCCceEEEEEcCCCCCCHHHHHHHHHc-----CCceEEeccCCCccccc
Confidence            356889999999998755443 3333333233 689999999964  34556666654     3445555433221    


Q ss_pred             ----------chHHHHHHHHhhcC-----------------CCEEEEEeCCCCCCCCChHH
Q 026146           79 ----------GLGTAYIHGLKHAS-----------------GSFVVIMDADLSHHPKYLPS  112 (242)
Q Consensus        79 ----------g~~~a~n~g~~~a~-----------------~d~i~~lD~D~~~~~~~l~~  112 (242)
                                .....||.|++..+                 .-+|.|.|+|...+...+++
T Consensus        92 ~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFde  152 (281)
T 3cu0_A           92 REGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEE  152 (281)
T ss_dssp             ------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHH
T ss_pred             cccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHH
Confidence                      12467999997655                 24688999999888777776

>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*

Probab=97.76  E-value=0.00013  Score=54.45  Aligned_cols=101  Identities=13%  Similarity=0.084  Sum_probs=66.0

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCC--CCChHHHHHHHHHHhCCCcEEEeeCCCC-------
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGS--PDGTQEVVKQLQQLYGEDRILLRPRPKK-------   77 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s--~d~t~~~l~~~~~~~~~~~~~~~~~~~~-------   77 (242)
                      .|.|=+|.|||.+.....++ ..|.+.+.. +++.+|||+|+.  ++.+.++|++.     +...+++..+..       
T Consensus         2 ~p~I~vVTPTy~R~~Q~a~L-tRLa~TL~~Vp~L~WIVVEd~~~~t~~va~lL~~s-----gl~y~HL~~~~p~~~~~~~   75 (253)
T 1v84_A            2 LPTIHVVTPTYSRPVQKAEL-TRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDT-----GLNYTHLHVETPRNYKLRG   75 (253)
T ss_dssp             CCEEEEEEEECCSTTHHHHH-HHHHHHHTTSSSEEEEEEESSSSCCHHHHHHHHHH-----CCEEEEEECCCCHHHHCC-
T ss_pred             CCEEEEEeCCCCccchhHHH-HHHhhhhccCCceEEEEEeCCCCCCHHHHHHHHHc-----CCceEEeecCCCccccccc
Confidence            57899999999986555432 233222222 789999999965  45566666654     344555544321       


Q ss_pred             -------cchHHHHHHHHhhcC---------CCEEEEEeCCCCCCCCChHHHH
Q 026146           78 -------LGLGTAYIHGLKHAS---------GSFVVIMDADLSHHPKYLPSFI  114 (242)
Q Consensus        78 -------~g~~~a~n~g~~~a~---------~d~i~~lD~D~~~~~~~l~~l~  114 (242)
                             ......||.|++..+         .-+|.|.|+|...+...++++-
T Consensus        76 ~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR  128 (253)
T 1v84_A           76 DARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR  128 (253)
T ss_dssp             ------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred             cccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence                   113468999997653         3578999999988877777743

>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}

Probab=97.73  E-value=0.00022  Score=52.98  Aligned_cols=101  Identities=14%  Similarity=0.148  Sum_probs=65.1

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCC--hHHHHHHHHHHhCCCcEEEeeCCC--Cc----
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDG--TQEVVKQLQQLYGEDRILLRPRPK--KL----   78 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~--t~~~l~~~~~~~~~~~~~~~~~~~--~~----   78 (242)
                      .|.|-+|.|||.+.....+ |..|.+.+.. +.+.+|||+|+..-.  +.++|++.     +...+++..+.  ++    
T Consensus         2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~Vp~l~WIVVEd~~~~~~~v~~lL~~s-----gl~y~HL~~~~~~~~~~~~   75 (246)
T 2d0j_A            2 LPTIYAITPTYSRPVQKAE-LTRLANTFRQVAQLHWILVEDAAARSELVSRFLARA-----GLPSTHLHVPTPRRYKRPG   75 (246)
T ss_dssp             CCCEEEEEEECCSTTHHHH-HHHHHHHHTTSTTEEEEEEESSSSCCHHHHHHHHHS-----CSCEEEEECCCCCC----C
T ss_pred             CCEEEEEeCCCCccchhHH-HHHHHHHHhcCCceEEEEEcCCCCCCHHHHHHHHHc-----CCceEEEecCCccccCCCC
Confidence            5789999999998655543 3333333333 678999999976432  34445443     34455554331  11    


Q ss_pred             --chHHHHHHHHhhcC---------CCEEEEEeCCCCCCCCChHHHH
Q 026146           79 --GLGTAYIHGLKHAS---------GSFVVIMDADLSHHPKYLPSFI  114 (242)
Q Consensus        79 --g~~~a~n~g~~~a~---------~d~i~~lD~D~~~~~~~l~~l~  114 (242)
                        .....||.|++..+         .-+|.|.|+|...+-..++++-
T Consensus        76 ~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR  122 (246)
T 2d0j_A           76 LPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMR  122 (246)
T ss_dssp             CCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHT
T ss_pred             CcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHh
Confidence              12478999997642         3688999999998888777743

>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*

Probab=97.63  E-value=0.00035  Score=53.37  Aligned_cols=190  Identities=12%  Similarity=0.055  Sum_probs=99.8

Q ss_pred             CCcEEEEEeCccccc--------------cHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee
Q 026146            8 KNKYSIIIPTYNERL--------------NIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP   73 (242)
Q Consensus         8 ~~~isiiip~~n~~~--------------~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~   73 (242)
                      .|++.+|||+.....              .+..+++.+.+.   .--+|+|+.+  .    +.++++...++ ..+.+..
T Consensus        16 ~M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~~---~i~~IvV~t~--~----~~i~~~~~~~g-~~v~~~~   85 (264)
T 3k8d_A           16 HMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARES---GAERIIVATD--H----EDVARAVEAAG-GEVCMTR   85 (264)
T ss_dssp             --CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHT---TCSEEEEEES--C----HHHHHHHHHTT-CEEEECC
T ss_pred             CCceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHhC---CCCEEEEECC--H----HHHHHHHHHcC-CEEEEec
Confidence            456888888876444              344666666543   2236777764  1    22344444433 3343333


Q ss_pred             CCCCcchHHHHHHHHhhc---CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEee---------------cC
Q 026146           74 RPKKLGLGTAYIHGLKHA---SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVR---------------SG  134 (242)
Q Consensus        74 ~~~~~g~~~a~n~g~~~a---~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~---------------~~  134 (242)
                      .....|.+. ...+++..   ..|+++++++|.. +++..+..+++.+.+.+.++++......               +.
T Consensus        86 ~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~  164 (264)
T 3k8d_A           86 ADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDA  164 (264)
T ss_dssp             TTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECT
T ss_pred             CCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECC
Confidence            444445443 45555544   5799999999985 7899999999998876776655433211               11


Q ss_pred             CccCchhhHHHHHhHHHHHHH-HHhCCCccccccchhhcchHHHHHhhhcccCCCcccchH--HHHHHHHcCCceEEee
Q 026146          135 GVHGWNLMRKLTSRGANVLAQ-TLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQME--MIVRACRKGYHIEEVP  210 (242)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~--~~~~~~~~g~~i~~~p  210 (242)
                      ......+.+............ ............|..+|++++++..-....  ...|..|  -.+|+...|+++..+.
T Consensus       165 ~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~--~~lE~~e~leqlr~le~G~~I~~~~  241 (264)
T 3k8d_A          165 EGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQP--SPLEHIEMLEQLRVLWYGEKIHVAV  241 (264)
T ss_dssp             TSBEEEEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCC--CHHHHHHTCTTHHHHHTTCCEEEEE
T ss_pred             CCeEEEEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCC--ChhhhHHHHHHHHHHHCCCceEEEE
Confidence            101111111100000000000 000111223456778999999998843221  1122221  1257789999988764

>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13

Probab=97.10  E-value=0.0067  Score=45.86  Aligned_cols=177  Identities=12%  Similarity=0.064  Sum_probs=92.6

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---CCCEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---SGSFVVI   98 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---~~d~i~~   98 (242)
                      ..+..+++.+.+.-   --+|+|+-+.      +.++++...++ ..+.+...+...|.+. ...+++..   ..+++++
T Consensus        28 Pli~~~l~~l~~~~---~~~ivVv~~~------~~i~~~~~~~g-~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv   96 (252)
T 3oam_A           28 PMIQWVYEQAMQAG---ADRVIIATDD------ERVEQAVQAFG-GVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVN   96 (252)
T ss_dssp             EHHHHHHHHHHHTT---CSEEEEEESC------HHHHHHHHHTT-CEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEE
T ss_pred             EHHHHHHHHHHhCC---CCeEEEECCH------HHHHHHHHHcC-CEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEE
Confidence            34557777776542   2367777641      23444444432 3454444444556555 34455554   4799999


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeec---------------CCccCchhhHHHHHhHHHHHHHHHh-CCC
Q 026146           99 MDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRS---------------GGVHGWNLMRKLTSRGANVLAQTLL-WPG  161 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  161 (242)
                      +++|.. +++..+..+++.+.+.+.++++......+               .+..-..+.+............... ...
T Consensus        97 ~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~~~~~~~~~  176 (252)
T 3oam_A           97 VQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ  176 (252)
T ss_dssp             CCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHHSSSCCCCS
T ss_pred             EeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCccccccccccc
Confidence            999985 78999999999987766666554322211               1000001100000000000000000 012


Q ss_pred             ccccccchhhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEee
Q 026146          162 VSDLTGSFRLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       162 ~~~~~g~~~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      ......|.++|++++++.+..... .....|..+. +++...|+++...+
T Consensus       177 ~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~-lr~l~~G~~i~~~~  225 (252)
T 3oam_A          177 PLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQ-LRVLWHGEKIHVAV  225 (252)
T ss_dssp             CEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTT-HHHHHTTCCEEEEE
T ss_pred             cceEEEEEEEcCHHHHHHHHcCCCCcccccchhHH-HHHHHCCCeEEEEE
Confidence            334667888999999998743221 1111222232 35678899988764

>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0

Probab=96.86  E-value=0.011  Score=44.83  Aligned_cols=191  Identities=15%  Similarity=0.162  Sum_probs=98.9

Q ss_pred             CCcEEEEEeCcccc--------------ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee
Q 026146            8 KNKYSIIIPTYNER--------------LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP   73 (242)
Q Consensus         8 ~~~isiiip~~n~~--------------~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~   73 (242)
                      .+++.+|||+....              ..+..+++.+.+.   .--+|+|+-+.      +.++++.+.++ ..+.+..
T Consensus         7 ~M~~~aIIlA~G~stRl~~K~L~~i~GkPli~~~l~~l~~~---~i~~VvVvt~~------~~i~~~~~~~g-~~v~~~~   76 (256)
T 3tqd_A            7 KMEFRVIIPARFDSTRLPGKALVDIAGKPMIQHVYESAIKS---GAEEVVIATDD------KRIRQVAEDFG-AVVCMTS   76 (256)
T ss_dssp             --CCEEEEECCCC---CTTGGGCEETTEEHHHHHHHHHHHT---TCSEEEEEESC------HHHHHHHHHTT-CEEEECC
T ss_pred             CCCceEEEEcCCCCCCCCCCCeeeECCchHHHHHHHHHHhC---CCCEEEEECCH------HHHHHHHHHcC-CeEEEeC
Confidence            35788888886533              3456677777654   12367777541      23444444433 3444433


Q ss_pred             CCCCcchHHHHHHHHhhc---CCCEEEEEeCCCC-CCCCChHHHHHHHHhc-CCcEEEEEEEe---------------ec
Q 026146           74 RPKKLGLGTAYIHGLKHA---SGSFVVIMDADLS-HHPKYLPSFIKKQLET-GASIVTGTRYV---------------RS  133 (242)
Q Consensus        74 ~~~~~g~~~a~n~g~~~a---~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~-~~~~v~~~~~~---------------~~  133 (242)
                      .+...|.+. ...|++..   ..|+++++++|.. +++..+..+++.+.+. +.++++.....               .+
T Consensus        77 ~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d  155 (256)
T 3tqd_A           77 SDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLN  155 (256)
T ss_dssp             TTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEEC
T ss_pred             CCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEEC
Confidence            344455544 56677765   5799999999985 7889999999988763 44554432211               00


Q ss_pred             CCccCchhhHHHHHhHHHHHH--HHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHH--HHHHHHcCCceEEe
Q 026146          134 GGVHGWNLMRKLTSRGANVLA--QTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEM--IVRACRKGYHIEEV  209 (242)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~--~~~~~~~g~~i~~~  209 (242)
                      .......+.+...........  .............|..+|++++++++-....  ...|..|-  .+|+...|++|...
T Consensus       156 ~~g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~--s~lE~~e~leqlr~le~G~~i~~~  233 (256)
T 3tqd_A          156 RRNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDA--CPAEKMEALEQLRILWHGGRIHMV  233 (256)
T ss_dssp             TTSBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCC--CHHHHHHTCTTHHHHHTTCCCEEE
T ss_pred             CCCEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCC--CcccchhhhHHHHHHHCCCeEEEE
Confidence            100001111110000000000  0000001123456778999999999843321  12222221  25778999999887


Q ss_pred             ee
Q 026146          210 PI  211 (242)
Q Consensus       210 p~  211 (242)
                      ..
T Consensus       234 ~~  235 (256)
T 3tqd_A          234 VA  235 (256)
T ss_dssp             EC
T ss_pred             Ee
Confidence            64

>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*

Probab=96.67  E-value=0.002  Score=49.44  Aligned_cols=114  Identities=13%  Similarity=0.131  Sum_probs=74.3

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCC-hHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDG-TQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI   85 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~-t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n   85 (242)
                      ....++++|-||++.+.|.+.++.+.+. . .--+|+||=++.... .......+.. . ...++++..+.|.  -.+|-
T Consensus        26 ~~~~FTvvi~ty~R~~~L~~lv~~~~~~-~-~v~~IvVvWn~~~~~pp~~~~~~~~~-~-~vpv~v~~~~~ns--LnnRF   99 (293)
T 1omz_A           26 ALDSFTLIMQTYNRTDLLLRLLNHYQAV-P-SLHKVIVVWNNVGEKGPEELWNSLGP-H-PIPVIFKPQTANK--MRNRL   99 (293)
T ss_dssp             CTTCEEEEEEESSCHHHHHHHHHHHTTS-T-TEEEEEEEECCTTCCCTHHHHHHTCC-C-SSCEEEEECSSCC--GGGGG
T ss_pred             CCCceEEEEEeecccHHHHHHHHHHhcC-C-CCCeEEEEeCCCCCCCChhhccccCC-C-CccEEEEeCCCCc--hhhcc
Confidence            3467999999999887777777766433 1 234788776665433 3322322210 1 2458887766552  12222


Q ss_pred             HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      .-....+++.|+.+|+|..++.+-|+-..+.-++.+..+|+
T Consensus       100 ~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVG  140 (293)
T 1omz_A          100 QVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIG  140 (293)
T ss_dssp             SCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEE
T ss_pred             CCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceec
Confidence            33345578999999999999999898888888776655554

>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13

Probab=96.38  E-value=0.057  Score=39.97  Aligned_cols=109  Identities=15%  Similarity=0.101  Sum_probs=67.6

Q ss_pred             CcEEEEEeCccc--------------cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC
Q 026146            9 NKYSIIIPTYNE--------------RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR   74 (242)
Q Consensus         9 ~~isiiip~~n~--------------~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~   74 (242)
                      +++.+||++...              ...+..+++.+.+..  .--+|+|+-+.      +.+.++...++   +.++..
T Consensus         2 ~~~~aiIlA~G~s~R~~~K~l~~i~Gkpli~~~i~~~~~~~--~~~~ivv~~~~------~~i~~~~~~~g---~~~~~~   70 (229)
T 1qwj_A            2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAG--VFQSVWVSTDH------DEIENVAKQFG---AQVHRR   70 (229)
T ss_dssp             CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHHT--CCSEEEEEESC------HHHHHHHHHTT---CEEEEC
T ss_pred             CcEEEEEEcCCCCCCCCCcccceECCEEHHHHHHHHHHhCC--CcCEEEEECCh------HHHHHHHHHcC---CEEEeC
Confidence            356667776532              345567777776552  11367777631      12333333332   333443


Q ss_pred             C-----CCcchHHHHHHHHhhc-CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEE
Q 026146           75 P-----KKLGLGTAYIHGLKHA-SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGT  128 (242)
Q Consensus        75 ~-----~~~g~~~a~n~g~~~a-~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~  128 (242)
                      +     ...+...+...|++.. ..|+++++++|.. +++..+..+++.+.+.+.+.++..
T Consensus        71 ~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~  131 (229)
T 1qwj_A           71 SSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV  131 (229)
T ss_dssp             CGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred             hhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence            2     2234456777888876 5799999999986 678899999998877666655443

>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*

Probab=96.17  E-value=0.065  Score=44.78  Aligned_cols=178  Identities=15%  Similarity=0.174  Sum_probs=104.5

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCC---CEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASG---SFVVI   98 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~---d~i~~   98 (242)
                      +.|...|+.+.+.-   .-+|+||-.-..+.-.+.+.++...+ +..+.++..++..|-+.|...++.....   +.+++
T Consensus        41 p~i~~~l~~~~~~g---~~~i~vv~~~~~~~i~~~~~~~~~~~-~~~i~~~~q~~~lGTa~Av~~a~~~l~~~~~~~~lv  116 (501)
T 3st8_A           41 SMLSHVLHAIAKLA---PQRLIVVLGHDHQRIAPLVGELADTL-GRTIDVALQDRPLGTGHAVLCGLSALPDDYAGNVVV  116 (501)
T ss_dssp             EHHHHHHHHHHHHC---CSEEEEEECTTHHHHHHHHHHHHHHH-TSCCEEEECSSCCCHHHHHHHHHTTSCTTCCSEEEE
T ss_pred             hHHHHHHHHHHhCC---CCEEEEEeCCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCCcHHHHHHHHHHhccccccceee
Confidence            46777888886652   33777776543333334444433333 3578888888889999999999988753   46777


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCch----------hhHHHHHhHHHHHHHHHhCCCcccccc
Q 026146           99 MDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWN----------LMRKLTSRGANVLAQTLLWPGVSDLTG  167 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~g  167 (242)
                      +.+|.. +..+.+..+++...+.+.++.+......+....+.-          +..+........        .+....+
T Consensus       117 l~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~~~~g~v~~ivEk~~~~~~~~--------~i~~in~  188 (501)
T 3st8_A          117 TSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEVMAIVEQTDATPSQR--------EIREVNA  188 (501)
T ss_dssp             EETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTTCCEEEEECGGGCCHHHH--------HCCEEEE
T ss_pred             ecCcceeecHHHHHHHHHHHhhccccceEeeeccCCchhccccccccceeEEeeccccCCChhhc--------cceeeec
Confidence            777765 677889999988877777766554333322111100          000100000000        1223456


Q ss_pred             chhhcchHHHHHhhhccc---CCCcccchHHHHHHHHcCCceEEeee
Q 026146          168 SFRLYKKSVLEDVISSCV---SKGYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       168 ~~~~~rr~~~~~~~~~~~---~~~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      +.+++..+.+.++.....   .....+-.+....+...|..+.....
T Consensus       189 Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~~~~g~~v~~~~~  235 (501)
T 3st8_A          189 GVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASHV  235 (501)
T ss_dssp             EEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHHHHTTCCEEEEEC
T ss_pred             eeeeecchhHHHhhhhhcccccccccchhhHHHHHHhcCceEEEEec
Confidence            777899998888744322   11222234555667778887776653

>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*

Probab=96.07  E-value=0.27  Score=36.57  Aligned_cols=95  Identities=13%  Similarity=0.104  Sum_probs=58.9

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--CCcchHHHHHHHHhhcCCCEEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--KKLGLGTAYIHGLKHASGSFVVI   98 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--~~~g~~~a~n~g~~~a~~d~i~~   98 (242)
                      ...+..+++.+.+..  ..-+|+|+-+.      +.+.++...++   +.++..+  ...|.+.+. .|++....+++++
T Consensus        27 ~pli~~~i~~~~~~~--~~~~ivvv~~~------~~i~~~~~~~~---~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv   94 (245)
T 1h7e_A           27 KPMIQHVYERALQVA--GVAEVWVATDD------PRVEQAVQAFG---GKAIMTRNDHESGTDRLV-EVMHKVEADIYIN   94 (245)
T ss_dssp             EEHHHHHHHHHHTCT--TCCEEEEEESC------HHHHHHHHHTT---CEEEECCSCCSSHHHHHH-HHHHHSCCSEEEE
T ss_pred             chHHHHHHHHHHhCC--CCCeEEEECCc------HHHHHHHHHcC---CeEEeCCCccCCcHHHHH-HHHHhCCCCEEEE
Confidence            355667777775441  11377777642      23344444332   4455532  234554444 5666667799999


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhc-CCcEEEE
Q 026146           99 MDADLS-HHPKYLPSFIKKQLET-GASIVTG  127 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~-~~~~v~~  127 (242)
                      +++|.. +++..+..+++.+.+. +.++++.
T Consensus        95 ~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~  125 (245)
T 1h7e_A           95 LQGDEPMIRPRDVETLLQGMRDDPALPVATL  125 (245)
T ss_dssp             CCTTCTTCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred             EcCCcCcCCHHHHHHHHHHHHhCCCCCEEEE
Confidence            999986 6888999999988766 6666543

>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*

Probab=95.94  E-value=0.029  Score=40.74  Aligned_cols=89  Identities=9%  Similarity=0.111  Sum_probs=58.5

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CC-cchHHHHHHHHhhcCCCEEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KK-LGLGTAYIHGLKHASGSFVVIM   99 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~-~g~~~a~n~g~~~a~~d~i~~l   99 (242)
                      ..+..+++.+....    -+|+|+.+..   ... +.    ..   .+.++... .. .|...+...|++....++++++
T Consensus        34 pli~~~l~~l~~~~----~~ivvv~~~~---~~~-~~----~~---~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~   98 (201)
T 1e5k_A           34 PLWQHVADALMTQL----SHVVVNANRH---QEI-YQ----AS---GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFC   98 (201)
T ss_dssp             EHHHHHHHHHHHHC----SCEEEECSSS---HHH-HH----TT---SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEEE
T ss_pred             eHHHHHHHHHHhhC----CEEEEEcCCc---HHH-Hh----hc---CCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence            45566777776431    2577775432   111 21    11   34445443 22 5899999999999889999999


Q ss_pred             eCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146          100 DADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus       100 D~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ++|.. ++++.++.+++.  +.+.++++.
T Consensus        99 ~~D~P~i~~~~i~~l~~~--~~~~~~~~~  125 (201)
T 1e5k_A           99 PCDTPYIPPDLAARLNHQ--RKDAPVVWV  125 (201)
T ss_dssp             ETTCTTCCTTHHHHHHHT--CTTCSEEEE
T ss_pred             eCCcCcCCHHHHHHHHhh--cCCCCEEEE
Confidence            99984 788889998876  345666554

>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}

Probab=95.94  E-value=0.051  Score=39.70  Aligned_cols=94  Identities=17%  Similarity=0.198  Sum_probs=64.5

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC-CCCcchHHHHHHHHhhcCCCEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR-PKKLGLGTAYIHGLKHASGSFVV   97 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~-~~~~g~~~a~n~g~~~a~~d~i~   97 (242)
                      +....+..+++.+.+.      +|+||-+.     .+.++.+...+   .+.++.. ....|...+...|++.+ .+++ 
T Consensus        24 ~G~pli~~~~~~l~~~------~vvvv~~~-----~~~~~~~~~~~---~~~~v~d~~~~~G~~~si~~gl~~~-~~~v-   87 (208)
T 3ngw_A           24 CGKKLIEWVLEKYSPF------QTVFVCRD-----EKQAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRHF-GSCV-   87 (208)
T ss_dssp             TTEEHHHHHHHHHTTS------EEEEECSS-----HHHHHHHHTTS---CSCEECCTTCCCSHHHHHHHHHHHH-SSEE-
T ss_pred             CCeeHHHHHHHHhcCC------CEEEEECC-----HHHHHHHHHhc---CCeEEecCCCCCChHHHHHHHHHHc-CCCE-
Confidence            4556677777777432      78888642     23344443322   2344433 23357889999999999 8999 


Q ss_pred             EEeCCCC-CCCCChHHHHHHHHhcCCcEEEEE
Q 026146           98 IMDADLS-HHPKYLPSFIKKQLETGASIVTGT  128 (242)
Q Consensus        98 ~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~  128 (242)
                      ++.+|.. ++++.+..+++.+.+.+.++++..
T Consensus        88 v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~  119 (208)
T 3ngw_A           88 VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK  119 (208)
T ss_dssp             EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence            9999986 789999999998876577777654

>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A

Probab=95.87  E-value=0.084  Score=38.95  Aligned_cols=108  Identities=14%  Similarity=0.125  Sum_probs=66.6

Q ss_pred             CcEEEEEeCcccc--------------ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC
Q 026146            9 NKYSIIIPTYNER--------------LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR   74 (242)
Q Consensus         9 ~~isiiip~~n~~--------------~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~   74 (242)
                      +++.+||++-...              ..+..+++.+.+..  .--+|+|+.+.  +    .+.++...++   +.++..
T Consensus         3 m~~~aiIlA~G~g~R~~~K~l~~i~gkpll~~~l~~~~~~~--~~~~ivvv~~~--~----~i~~~~~~~~---~~~~~~   71 (228)
T 1ezi_A            3 KQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSK--CFDRIIVSTDG--G----LIAEEAKNFG---VEVVLR   71 (228)
T ss_dssp             CEEEEEEECCSSCSSSTTTTTCEETTEEHHHHHHHHHHHHC--CCSEEEEEESC--H----HHHHHHHHTT---CEEEEC
T ss_pred             CceEEEEecCCCCCCCCCcccceeCCcCHHHHHHHHHHhCC--CCCEEEEECCC--H----HHHHHHHHcC---CEEEeC
Confidence            4577788775433              44567777776542  12377777652  1    1233333332   333333


Q ss_pred             C-----CCcchHHHHHHHHhhcC--CCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           75 P-----KKLGLGTAYIHGLKHAS--GSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        75 ~-----~~~g~~~a~n~g~~~a~--~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      +     ...|...+...|++...  .++++++++|.. +++..+..+++.+.+.+.++++.
T Consensus        72 ~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~  132 (228)
T 1ezi_A           72 PAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVS  132 (228)
T ss_dssp             CC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEE
T ss_pred             chHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence            2     23456777888888763  589999999986 67888999988776555555544

>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*

Probab=95.63  E-value=0.026  Score=43.29  Aligned_cols=94  Identities=12%  Similarity=-0.005  Sum_probs=64.3

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH-----------------------hCCCcEEEeeCCCCc
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL-----------------------YGEDRILLRPRPKKL   78 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~-----------------------~~~~~~~~~~~~~~~   78 (242)
                      ..|..+++.+.+.   .--+|+|+-....    +.++++...                       ..+..+.++..+...
T Consensus        34 pli~~~l~~l~~~---gi~~i~vv~~~~~----~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  106 (281)
T 3juk_A           34 PLIQYAVEEAMEA---GCEVMAIVTGRNK----RSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEKCCFSYVRQKQMK  106 (281)
T ss_dssp             BHHHHHHHHHHHH---TCCEEEEEECTTH----HHHHHHTSCCC--------CCHHHHHHHHHHHHHHCEEEEEECSSCC
T ss_pred             EHHHHHHHHHHhC---CCCEEEEEecCCH----HHHHHHHhcchhhhhhhhcccchhhhhhhhccccCccEEEEecCCCC
Confidence            6778888888765   2236777765221    122222111                       012356677777778


Q ss_pred             chHHHHHHHHhhcCCCEEEEEeCCCCCCCC----ChHHHHHHHHhcCC
Q 026146           79 GLGTAYIHGLKHASGSFVVIMDADLSHHPK----YLPSFIKKQLETGA  122 (242)
Q Consensus        79 g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~----~l~~l~~~~~~~~~  122 (242)
                      |.+.+...|+.....+.++++.+|..++++    .+..+++.+.+.+.
T Consensus       107 Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~  154 (281)
T 3juk_A          107 GLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC  154 (281)
T ss_dssp             CHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred             CcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence            999999999988877889999999987777    69999988776555

>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A

Probab=95.51  E-value=0.47  Score=34.81  Aligned_cols=91  Identities=10%  Similarity=0.025  Sum_probs=57.2

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-------CCC
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-------SGS   94 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-------~~d   94 (242)
                      ..+..+++.+.+..  ..-+|+|+-+...+...+ +.+    ++...+.++  ....|.+.+.-.|++..       ..+
T Consensus        35 pli~~~l~~l~~~~--~~~~ivvv~~~~~~~~~~-~~~----~~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~  105 (231)
T 1vgw_A           35 TVLEHVLGIFERHE--AVDLTVVVVSPEDTFADK-VQT----AFPQVRVWK--NGGQTRAETVRNGVAKLLETGLAAETD  105 (231)
T ss_dssp             EHHHHHHHHHHTCT--TCCEEEEECCTTCSTHHH-HHH----HCTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTS
T ss_pred             EHHHHHHHHHHcCC--CCCeEEEEECccHHHHHH-HHh----cCCCceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCC
Confidence            45566777665431  123677776543333322 322    221246555  23467888888888765       469


Q ss_pred             EEEEEeCCCC-CCCCChHHHHHHHHhcC
Q 026146           95 FVVIMDADLS-HHPKYLPSFIKKQLETG  121 (242)
Q Consensus        95 ~i~~lD~D~~-~~~~~l~~l~~~~~~~~  121 (242)
                      +++++++|.. ++++.+..+++.+.+.+
T Consensus       106 ~vlv~~~D~p~~~~~~i~~l~~~~~~~~  133 (231)
T 1vgw_A          106 NILVHDAARCCLPSEALARLIEQAGNAA  133 (231)
T ss_dssp             EEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred             EEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence            9999999975 67888999998876543

>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*

Probab=95.23  E-value=0.12  Score=39.33  Aligned_cols=175  Identities=11%  Similarity=0.034  Sum_probs=95.2

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIM   99 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~l   99 (242)
                      ..|..+++++.+.   .--+|+|+-+...  ..++ .++...  ..+..+.+...+...|.+.++..+++....+.++++
T Consensus        56 pli~~~l~~l~~~---g~~~iivv~~~~~--~~~~-~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~  129 (269)
T 4ecm_A           56 PMIYHAVYKLKQC---DITDIMIITGKEH--MGDV-VSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVI  129 (269)
T ss_dssp             EHHHHHHHHHHHT---TCCEEEEEECTTT--HHHH-HHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEE
T ss_pred             EHHHHHHHHHHHC---CCCEEEEECChhh--HHHH-HHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEE
Confidence            4456677777654   2236777765321  1222 333221  112356666666677999999988888778999999


Q ss_pred             eCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHH---hCCCccccccchhhcchHH
Q 026146          100 DADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTL---LWPGVSDLTGSFRLYKKSV  176 (242)
Q Consensus       100 D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~rr~~  176 (242)
                      .+|..+. ..+..+++.+.+.+.++++......+..  .+.....-.    ..+....   ..+......++.+++++++
T Consensus       130 ~~D~~~~-~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~~g~v~~d~----g~v~~~~ekp~~~~~~~~~~Giy~~~~~~  202 (269)
T 4ecm_A          130 LGDNIFS-DDIRPYVEEFTNQKEGAKVLLQSVDDPE--RFGVANIQN----RKIIEIEEKPKEPKSSYAVTGIYLYDSKV  202 (269)
T ss_dssp             ETTEEES-SCSHHHHHHHHTSSSSEEEEEEECSCGG--GSEEEEEET----TEEEEEEESCSSCSCSEEEEEEEEECTTH
T ss_pred             eCCccCc-cCHHHHHHHHHhcCCCeEEEEEECCCCC--CceEEEEcC----CEEEEEEECCCCCCCcEEEEEEEEECHHH
Confidence            9998775 6788888888766666655433222111  000000000    0000000   0112234567778999999


Q ss_pred             HHHhhhcccC-CCcccchHHHHHHHHcCCceEEee
Q 026146          177 LEDVISSCVS-KGYVFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       177 ~~~~~~~~~~-~~~~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      ++.+...... .+-.+-.++...+...| ++...+
T Consensus       203 l~~l~~~~~~~~ge~~l~d~l~~l~~~g-~v~~~~  236 (269)
T 4ecm_A          203 FSYIKELKPSARGELEITDINNWYLKRG-VLTYNE  236 (269)
T ss_dssp             HHHHTSCCBCTTSCBCHHHHHHHHHHTT-CEEEEE
T ss_pred             HHhhhhcCCCCCCeeeHHHHHHHHHHcC-CEEEEE
Confidence            9766321111 11112245666677777 665544

>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A

Probab=95.20  E-value=0.023  Score=40.89  Aligned_cols=94  Identities=14%  Similarity=0.065  Sum_probs=58.3

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhc--CCCEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHA--SGSFVV   97 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a--~~d~i~   97 (242)
                      ...+..+++.+.+..   .-+|+|+-+..    .+.+.++....   .+.++..+ ...|...+...|++..  ..++++
T Consensus        31 ~pll~~~l~~l~~~~---~~~i~vv~~~~----~~~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vl  100 (197)
T 2wee_A           31 TTVLGATLDVARQAG---FDQLILTLGGA----ASAVRAAMALD---GTDVVVVEDVERGCAASLRVALARVHPRATGIV  100 (197)
T ss_dssp             EEHHHHHHHHHHHTT---CSEEEEEECTT----HHHHHHHSCCT---TSEEEECC----CCHHHHHHHHTTSCTTEEEEE
T ss_pred             ccHHHHHHHHHHhcC---CCcEEEEeCCC----HHHHHHHhccC---CCEEEECCCcccCHHHHHHHHHHHhcccCCeEE
Confidence            355667777776541   22677775432    12233332221   34455433 3458889999999887  468999


Q ss_pred             EEeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146           98 IMDADLS-HHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        98 ~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      ++++|.. +++..+..+++. . .+.++++
T Consensus       101 v~~~D~P~~~~~~i~~l~~~-~-~~~~i~~  128 (197)
T 2wee_A          101 LMLGDQPQVAPATLRRIIDV-G-PATEIMV  128 (197)
T ss_dssp             EEETTCTTCCHHHHHHHHHH-G-GGSSEEE
T ss_pred             EEeCCcCCCCHHHHHHHHhh-c-CCCCEEE
Confidence            9999985 788889999887 3 4455543

>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}

Probab=95.17  E-value=0.027  Score=40.54  Aligned_cols=93  Identities=17%  Similarity=0.145  Sum_probs=58.4

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhc--CCCEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHA--SGSFVVI   98 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a--~~d~i~~   98 (242)
                      ..+..+++.+.+.   ..-+|+|+.+...    +.++++...+   .+.++..+ ...|...+...|++..  ..+++++
T Consensus        32 pli~~~l~~l~~~---~~~~i~vv~~~~~----~~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv  101 (199)
T 2waw_A           32 TLLGATLAMARRC---PFDQLIVTLGGAA----DEVLEKVELD---GLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVL  101 (199)
T ss_dssp             EHHHHHHHHHHTS---SCSEEEEEECTTH----HHHHHHSCCT---TSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEE
T ss_pred             CHHHHHHHHHHhC---CCCcEEEEeCCCH----HHHHHHhccC---CCEEEECCCcccCHHHHHHHHHHhhhccCCeEEE
Confidence            4556667666543   2236777765321    2233332222   24444432 3457788899999887  5799999


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146           99 MDADLS-HHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      +++|.. +++..+..+++.  +.+.++++
T Consensus       102 ~~~D~P~~~~~~i~~l~~~--~~~~~~~~  128 (199)
T 2waw_A          102 MLGDQPGITASAVASLIAG--GRGATIAV  128 (199)
T ss_dssp             EETTCTTCCHHHHHHHHHH--HTTCSEEE
T ss_pred             EeCCcccCCHHHHHHHHhh--cCCCCEEE
Confidence            999987 688889998887  34556554

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0

Probab=95.05  E-value=0.19  Score=38.43  Aligned_cols=107  Identities=6%  Similarity=0.042  Sum_probs=65.3

Q ss_pred             CCCcEEEEEeCcc-ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCC-cc-----
Q 026146            7 NKNKYSIIIPTYN-ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKK-LG-----   79 (242)
Q Consensus         7 ~~~~isiiip~~n-~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~-~g-----   79 (242)
                      +++.+.|++.+=+ -...+.-++.|+.+......+.++|+.++-+++..+.++++...++ ..+.++.-+.. ..     
T Consensus         2 ~~m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~   80 (276)
T 3tzt_A            2 NAMADALLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFS-YTLYPIRATDDLFSFAKVT   80 (276)
T ss_dssp             ---CEEEEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTT-CEEEEEECC----------
T ss_pred             CceeEEEEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcC-CEEEEEEeCHHHHhcCccc
Confidence            3467888877733 3456677888888775434788999988877777788888766543 45666654421 11     


Q ss_pred             -----hHHHHHHHHhhc--CCCEEEEEeCCCCCCCCChHHHHH
Q 026146           80 -----LGTAYIHGLKHA--SGSFVVIMDADLSHHPKYLPSFIK  115 (242)
Q Consensus        80 -----~~~a~n~g~~~a--~~d~i~~lD~D~~~~~~~l~~l~~  115 (242)
                           ....+-...+..  ..+-+++||+|.++-. -+.++.+
T Consensus        81 ~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~-di~~L~~  122 (276)
T 3tzt_A           81 DRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN-PLDDLLR  122 (276)
T ss_dssp             ---CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS-CSHHHHT
T ss_pred             cccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC-CHHHHhh
Confidence                 111222222232  3589999999987654 4555554

>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}

Probab=94.90  E-value=0.21  Score=36.88  Aligned_cols=87  Identities=14%  Similarity=0.120  Sum_probs=54.5

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeC
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDA  101 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~  101 (242)
                      ..+..+++.+.+. - .  +|+|+-+.      +.+.++...+  ..+.+.......|.+.+. .|++....++++++++
T Consensus        28 pli~~~l~~~~~~-~-~--~i~v~~~~------~~i~~~~~~~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~~~   94 (234)
T 2y6p_A           28 PLIRWVVEGLVKT-G-E--RVILATDS------ERVKEVVEDL--CEVFLTPSDLPSGSDRVL-YVVRDLDVDLIINYQG   94 (234)
T ss_dssp             EHHHHHHHHHHTT-T-S--CEEEEESC------HHHHHHHTTT--SEEEECCTTCCSHHHHHH-HHHTTCCCSEEEECCT
T ss_pred             EHHHHHHHHHHHh-C-C--EEEEECCh------HHHHHHHHhc--eEEEECCcccccchHHHH-HHHHhCCCCEEEEecC
Confidence            5567778877655 2 2  56666542      2233333322  233322223345666655 5777777899999999


Q ss_pred             CC-CCCCCChHHHHHHHHhcC
Q 026146          102 DL-SHHPKYLPSFIKKQLETG  121 (242)
Q Consensus       102 D~-~~~~~~l~~l~~~~~~~~  121 (242)
                      |. .+++..+..+++.+.+.+
T Consensus        95 D~P~~~~~~i~~l~~~~~~~~  115 (234)
T 2y6p_A           95 DEPFVYEEDIKLIFRELEKGE  115 (234)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTC
T ss_pred             CcCcCCHHHHHHHHHHHHhCC
Confidence            99 677789999998887655

>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A

Probab=94.74  E-value=0.14  Score=37.93  Aligned_cols=105  Identities=13%  Similarity=0.137  Sum_probs=64.7

Q ss_pred             CCcEEEEEeCccc-----------------cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEE
Q 026146            8 KNKYSIIIPTYNE-----------------RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRIL   70 (242)
Q Consensus         8 ~~~isiiip~~n~-----------------~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~   70 (242)
                      ++++.+||++-..                 ...+..+++.+.+..  ..-+|+|+-+...+...+ +.    .++...+.
T Consensus         5 ~~~~~~iIlA~G~g~R~~~~~~K~l~~i~g~pll~~~i~~l~~~~--~~~~ivvv~~~~~~~~~~-~~----~~~~~~v~   77 (236)
T 1i52_A            5 HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHP--RVKRVVIAISPGDSRFAQ-LP----LANHPQIT   77 (236)
T ss_dssp             CCCEEEEEEECCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTST--TEEEEEEEECTTCCSGGG-SG----GGGCTTEE
T ss_pred             CCceeEEEECCcCccccCCCCCcceeeECCEEHHHHHHHHHHhCC--CCCeEEEEeCccHHHHHH-HH----hcCCCCEE
Confidence            4567777776432                 234455666664321  123677776544333322 22    22212465


Q ss_pred             EeeCCCCcchHHHHHHHHhhcC-CCEEEEEeCCCC-CCCCChHHHHHHHHhcC
Q 026146           71 LRPRPKKLGLGTAYIHGLKHAS-GSFVVIMDADLS-HHPKYLPSFIKKQLETG  121 (242)
Q Consensus        71 ~~~~~~~~g~~~a~n~g~~~a~-~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~  121 (242)
                      ++..  ..|...+...|++... .++++++++|.. ++++.+..+++.+.+.+
T Consensus        78 ~~~~--~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~  128 (236)
T 1i52_A           78 VVDG--GDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR  128 (236)
T ss_dssp             EEEC--CSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred             EECC--CCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence            5543  2478888888998874 799999999976 68888999888776544

>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}

Probab=94.36  E-value=0.017  Score=41.75  Aligned_cols=90  Identities=17%  Similarity=0.145  Sum_probs=56.8

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHHHHHHhhcCC-CEEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAYIHGLKHASG-SFVVIM   99 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~n~g~~~a~~-d~i~~l   99 (242)
                      ..+..+++.+.+.      +++||-+..    .+.++++..    ..+ ++..+. ..|...+...|++.... ++++++
T Consensus        29 pll~~~l~~l~~~------~ivvv~~~~----~~~~~~~~~----~~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~   93 (197)
T 3d5n_A           29 PIIMRTIRIYGDL------EKIIIVGKY----VNEMLPLLM----DQI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVA   93 (197)
T ss_dssp             BHHHHHHHHTTTS------BCCEEECTT----HHHHGGGCT----TSC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEE
T ss_pred             EHHHHHHHHHHhC------CEEEEECCC----HHHHHHHhc----CCE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEE
Confidence            4455555555322      666665532    122333221    134 454432 35888899999988865 899999


Q ss_pred             eCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146          100 DADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus       100 D~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ++|.. ++++.++.+++.+ +.+.++++.
T Consensus        94 ~~D~P~i~~~~i~~l~~~~-~~~~~~~~~  121 (197)
T 3d5n_A           94 LGDMPFVTKEDVNKIINTF-KPNCKAVIP  121 (197)
T ss_dssp             ETTCCCSCHHHHHHHHHTC-CTTCSEEEE
T ss_pred             eCCccccCHHHHHHHHHHh-cCCCcEEEE
Confidence            99985 6888899988877 455666554

>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*

Probab=94.33  E-value=0.069  Score=43.90  Aligned_cols=177  Identities=14%  Similarity=0.125  Sum_probs=92.0

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-CCEEEEEe
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-GSFVVIMD  100 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~i~~lD  100 (242)
                      ..+..+++.+.+.-   --+++|+-+..    .+.++++....   .+.++..+...|.+.+...|++... .+++++++
T Consensus        37 pli~~~l~~l~~~~---~~~i~vv~~~~----~~~i~~~~~~~---~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~  106 (459)
T 4fce_A           37 PMVQHVIDAAMKLG---AQHVHLVYGHG----GELLKKTLADP---SLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLY  106 (459)
T ss_dssp             EHHHHHHHHHHHHT---CSCEEEEESSC----HHHHHHHC--------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEEE
T ss_pred             eHHHHHHHHHHhCC---CCcEEEEeCCC----HHHHHHHhccC---CcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEEe
Confidence            45677778776652   22567665532    23333333222   3556666667889999999999886 49999999


Q ss_pred             CCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHh---CCCccccccchhhcchHH
Q 026146          101 ADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLL---WPGVSDLTGSFRLYKKSV  176 (242)
Q Consensus       101 ~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~rr~~  176 (242)
                      +|.. +++..++++++.+.+  .++++......+....+. .... .........+...   ........++.++++++.
T Consensus       107 ~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~g~-v~~~-~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~  182 (459)
T 4fce_A          107 GDVPLISVDTLQRLLAAKPE--GGIGLLTVKLDNPSGYGR-IVRE-NGDVVGIVEHKDASDAQREINEINTGILVANGRD  182 (459)
T ss_dssp             TTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSCCTTSCE-EEEE-TTEEEEEECGGGCCTTGGGCCEEEEEEEEEEHHH
T ss_pred             CCcccCCHHHHHHHHHHHhh--CCEEEEEEecCCCCcccE-EEeC-CCcEEEEEECCCCChHHhhccEEEEEEEEEEHHH
Confidence            9984 788889999888754  344333222111110000 0000 0000000000000   001122346677889887


Q ss_pred             HHHhhhccc---CCCcccchHHHHHHHHcCCceEEeeee
Q 026146          177 LEDVISSCV---SKGYVFQMEMIVRACRKGYHIEEVPIT  212 (242)
Q Consensus       177 ~~~~~~~~~---~~~~~~d~~~~~~~~~~g~~i~~~p~~  212 (242)
                      +.+......   ...-.+-.+....+.+.|.++..++..
T Consensus       183 l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~  221 (459)
T 4fce_A          183 LKRWLSLLDNNNAQGEFYITDIIALAHADGKKIATVHPT  221 (459)
T ss_dssp             HHHHHHTCCCCSTTCSCCTTHHHHHHHHTTCCEEEECCS
T ss_pred             HHHHHHHhCccccCCcEEHHHHHHHHHHCCCeEEEEEcC
Confidence            765522211   111112245666778889888777643

>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}

Probab=93.96  E-value=0.077  Score=40.99  Aligned_cols=56  Identities=16%  Similarity=0.184  Sum_probs=45.0

Q ss_pred             CcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCCCC--CCChHHHHHHHHhcCC
Q 026146           67 DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHH--PKYLPSFIKKQLETGA  122 (242)
Q Consensus        67 ~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~--~~~l~~l~~~~~~~~~  122 (242)
                      ..+.++..+...|.+.+...|+.....+.++++.+|..++  +..+..+++...+.+.
T Consensus       106 ~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~  163 (297)
T 2ux8_A          106 GNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG  163 (297)
T ss_dssp             TSEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS
T ss_pred             CceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC
Confidence            3577777666789999999888877678999999999877  6789999988766554

>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A

Probab=93.91  E-value=0.46  Score=35.75  Aligned_cols=95  Identities=15%  Similarity=0.118  Sum_probs=57.5

Q ss_pred             cccHHHHH-HHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---CCCEE
Q 026146           21 RLNIALIV-YLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---SGSFV   96 (242)
Q Consensus        21 ~~~l~~~l-~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---~~d~i   96 (242)
                      ...+..++ +.+.+.   .--+|+|+-+.      +.+.++...++ ..+.+...+...|. .+...|++..   ..|++
T Consensus        26 kPli~~~i~~~~~~~---~~~~vvVvt~~------~~i~~~~~~~g-~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~v   94 (253)
T 4fcu_A           26 RPMILRVVDQAKKVE---GFDDLCVATDD------ERIAEICRAEG-VDVVLTSADHPSGT-DRLSEVARIKGWDADDII   94 (253)
T ss_dssp             EEHHHHHHHHHHTCT---TCCEEEEEESC------HHHHHHHHTTT-CCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEE
T ss_pred             eEhHHHHHHHHHHhc---CCCEEEEECCH------HHHHHHHHHcC-CeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEE
Confidence            34566677 666543   22367777652      22344444333 34443333333443 3566667665   36999


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhc-CCcEEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLET-GASIVT  126 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~-~~~~v~  126 (242)
                      +++++|.. ++++.+..+++.+.+. +.++++
T Consensus        95 lv~~gD~Pli~~~~i~~li~~~~~~~~~~~at  126 (253)
T 4fcu_A           95 VNVQGDEPLLPAQLVQQVAKLLVDKPNCSMST  126 (253)
T ss_dssp             EECCTTCTTCCHHHHHHHHHHHHHCTTCSEEE
T ss_pred             EEEeCCcccCCHHHHHHHHHHHHhCCCCCEEE
Confidence            99999985 7889999999998765 344443

>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}

Probab=93.83  E-value=0.58  Score=36.26  Aligned_cols=102  Identities=11%  Similarity=0.023  Sum_probs=62.7

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH-hCCCcEEEeeCCCCcchHHHHHHHHhhcC-CCEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL-YGEDRILLRPRPKKLGLGTAYIHGLKHAS-GSFV   96 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~-~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~i   96 (242)
                      +....|..+++.+.+. .  . +|+|+-+..   ..+.+.+.... ++...+.++..+...|.+.+...++.... .+++
T Consensus        35 gg~pli~~~l~~l~~~-~--~-~i~vv~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~~a~~~l~~~~~~  107 (308)
T 2qh5_A           35 DHKSLFELSFKRNASL-V--D-ETLIVCNEK---HYFLALEEIKNEIKNKSVGFLLESLSKNTANAIALSALMSDKEDLL  107 (308)
T ss_dssp             TTBCHHHHHHHHHHTT-C--S-EEEEEEEGG---GHHHHHHHTTTTCSSCEEEEEEESSCCCHHHHHHHHHHTSCTTSEE
T ss_pred             CCCCHHHHHHHHHHcc-C--C-CEEEEEChh---HHHHHHHHHHHhhCCCccEEEeCCCCCChHHHHHHHHHHhCCCCeE
Confidence            3446667777777654 2  2 566665432   22233333332 22114556665666789999888888765 5689


Q ss_pred             EEEeCCCCC-CCCChHHHHHH---HHhcCCcEEEE
Q 026146           97 VIMDADLSH-HPKYLPSFIKK---QLETGASIVTG  127 (242)
Q Consensus        97 ~~lD~D~~~-~~~~l~~l~~~---~~~~~~~~v~~  127 (242)
                      +++.+|..+ +++.+.++++.   +.+.+.++.++
T Consensus       108 lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~  142 (308)
T 2qh5_A          108 IVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFG  142 (308)
T ss_dssp             EEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             EEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence            999999986 66768888875   44445555444

>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}

Probab=93.69  E-value=0.21  Score=38.54  Aligned_cols=56  Identities=21%  Similarity=0.195  Sum_probs=44.1

Q ss_pred             CcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCCCC----CC---ChHHHHHHHHhcCC
Q 026146           67 DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHH----PK---YLPSFIKKQLETGA  122 (242)
Q Consensus        67 ~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~----~~---~l~~l~~~~~~~~~  122 (242)
                      ..+.++..+...|.+.+...|+.....+.++++.+|..++    +.   .+..+++.+.+.+.
T Consensus       102 ~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~  164 (302)
T 2e3d_A          102 VTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH  164 (302)
T ss_dssp             CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred             cceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence            3566666666789999999998887668899999998876    45   79999988766555

>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*

Probab=93.54  E-value=1.1  Score=33.58  Aligned_cols=94  Identities=10%  Similarity=0.132  Sum_probs=55.8

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--CCcchHHHHHHHHhh---cCCCE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--KKLGLGTAYIHGLKH---ASGSF   95 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--~~~g~~~a~n~g~~~---a~~d~   95 (242)
                      ...+..+++.+.+..   .-+|+|+.+.  +    .+.++...++   +.++..+  ...|.+ ....+++.   ...++
T Consensus        27 kpli~~~l~~l~~~~---~~~ivvv~~~--~----~i~~~~~~~~---~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~   93 (262)
T 1vic_A           27 KPMIQHVFEKALQSG---ASRVIIATDN--E----NVADVAKSFG---AEVCMTSVNHNSGTE-RLAEVVEKLAIPDNEI   93 (262)
T ss_dssp             EEHHHHHHHHHHHTT---CSEEEEEESC--H----HHHHHHHHTT---CEEEECCCSSCCHHH-HHHHHHHHTTCCTTCE
T ss_pred             eEHHHHHHHHHHhCC---CceEEEECCc--H----HHHHHHHhcC---CEEEECCccccCChH-HHHHHHHHhccCCCCE
Confidence            356677888876552   2377777652  1    2334333332   4444432  233433 23333333   25699


Q ss_pred             EEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           96 VVIMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        96 i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ++++++|.. +++..+..+++.+.+.+.++++.
T Consensus        94 vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~  126 (262)
T 1vic_A           94 IVNIQGDEPLIPPVIVRQVADNLAKFNVNMASL  126 (262)
T ss_dssp             EEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred             EEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEE
Confidence            999999985 68889999998887666665443

>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...

Probab=93.53  E-value=0.32  Score=37.49  Aligned_cols=103  Identities=13%  Similarity=0.129  Sum_probs=63.8

Q ss_pred             eCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH---hCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           16 PTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL---YGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        16 p~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~---~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      |.++. ..+...++.+...   .--+|+||..+..   .+.++++...   + +..+.+...+...|.+.+...|++...
T Consensus        29 pi~gk-pli~~~l~~l~~~---gi~~I~vv~~~~~---~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~a~~~i~  100 (293)
T 1fxo_A           29 PVYDK-PMIYYPLSTLMLA---GIREILIISTPQD---TPRFQQLLGDGSNW-GLDLQYAVQPSPDGLAQAFLIGESFIG  100 (293)
T ss_dssp             EETTE-ETTHHHHHHHHHT---TCCEEEEEECTTT---HHHHHHHHTTSGGG-TCEEEEEECSSCCCGGGHHHHTHHHHT
T ss_pred             eECCE-eHHHHHHHHHHHC---CCCEEEEEecccc---HHHHHHHHhccccc-CceEEEeeCCCCCCHHHHHHHHHHHhC
Confidence            44443 6777788888654   2236777654322   2233443332   2 234666666667789989988888776


Q ss_pred             CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           93 GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      .+.++++.+|..+....+..+++.+.+.+.++.+
T Consensus       101 ~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v  134 (293)
T 1fxo_A          101 NDLSALVLGDNLYYGHDFHELLGSASQRQTGASV  134 (293)
T ss_dssp             TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEE
T ss_pred             CCCEEEEECChhccCccHHHHHHHHHhcCCCcEE
Confidence            5666666699876446788888887644445433

>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}

Probab=93.49  E-value=0.3  Score=37.80  Aligned_cols=101  Identities=13%  Similarity=0.040  Sum_probs=62.9

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHH-HHhC-CCcEEEeeCC---------------CCcchHH
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQ-QLYG-EDRILLRPRP---------------KKLGLGT   82 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~-~~~~-~~~~~~~~~~---------------~~~g~~~   82 (242)
                      ....|..+++.+.+.   .--+|+||-+..   ..+.+++.. ...+ ...+.++..+               ...|.+.
T Consensus        32 g~pli~~~l~~~~~~---~~~~i~vv~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~  105 (303)
T 3pnn_A           32 GDTIMDYSVYDAIRA---GFGRLVFVIRHS---FEKEFREKILTKYEGRIPVELVFQELDRLPEGFSCPEGREKPWGTNH  105 (303)
T ss_dssp             SCCHHHHHHHHHHHH---TCCEEEEEECGG---GHHHHHHHTHHHHTTTSCEEEEECCTTCCCTTCCCCTTCCSCCCHHH
T ss_pred             CeeHHHHHHHHHHHC---CCCeEEEEcCch---HHHHHHHHHHHHhccCCcEEEEecccccccccccccccccccCCcHH
Confidence            335667778877654   223677776532   122233322 2222 2356676655               4678999


Q ss_pred             HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh---cCCcEEEE
Q 026146           83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE---TGASIVTG  127 (242)
Q Consensus        83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~---~~~~~v~~  127 (242)
                      |...+..... +.++++.+|..++++.+..+++.+.+   .+.++.+.
T Consensus       106 al~~a~~~i~-~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~  152 (303)
T 3pnn_A          106 AVLMGRDAIR-EPFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMV  152 (303)
T ss_dssp             HHHTTTTTCC-SCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEE
T ss_pred             HHHHHHHhcC-CCEEEEECCeecCHHHHHHHHHHHHHhccccCceEEE
Confidence            9988888874 45667789998888788889888764   34555443

>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6

Probab=93.09  E-value=0.61  Score=35.93  Aligned_cols=103  Identities=13%  Similarity=0.229  Sum_probs=62.4

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH---hCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL---YGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~---~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      +|.++ ...+...++.+...   .--+|+||....  + .+.++++...   + +..+.++..+...|.+.+.-.|++..
T Consensus        29 lpi~g-kpli~~~l~~l~~~---gi~~Iivv~~~~--~-~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~a~~~i  100 (295)
T 1lvw_A           29 LPIYD-KPMIYYPLSVLMLA---GIRDILIISTPR--D-LPLYRDLLGDGSQF-GVRFSYRVQEEPRGIADAFIVGKDFI  100 (295)
T ss_dssp             SEETT-EETTHHHHHHHHHT---TCCEEEEEECTT--T-HHHHHHHHTTSGGG-TSEEEEEECSSCCCGGGHHHHTHHHH
T ss_pred             cEECC-eeHHHHHHHHHHHC---CCCeEEEEeccc--h-HHHHHHHhhhcccc-CceEEEeeCCCCCChHHHHHHHHHHh
Confidence            34445 36778888888654   223677775422  1 2233444332   2 23466666666678888988888876


Q ss_pred             CC-CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           92 SG-SFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        92 ~~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      .. ++++++ +|..+....+.++++.+.+.+.++++
T Consensus       101 ~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~v  135 (295)
T 1lvw_A          101 GDSKVALVL-GDNVFYGHRFSEILRRAASLEDGAVI  135 (295)
T ss_dssp             TTSCEEEEE-TTCCEECTTHHHHHHHHHTCCSSEEE
T ss_pred             CCCcEEEEE-CCccccCcCHHHHHHHHHHcCCCcEE
Confidence            54 555555 99876446788888887554444433

>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*

Probab=93.05  E-value=0.16  Score=41.95  Aligned_cols=96  Identities=10%  Similarity=0.062  Sum_probs=65.2

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--CCEEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--GSFVVI   98 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--~d~i~~   98 (242)
                      ...+..+++.+.+.   .--+|+|+-+..    .+.++++...    .+.++..+...|.+.+...|++...  .+++++
T Consensus        39 kpli~~~l~~l~~~---g~~~iivv~~~~----~~~i~~~~~~----~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~vlv  107 (468)
T 1hm9_A           39 ISMLEHVFRSVGAI---QPEKTVTVVGHK----AELVEEVLAG----QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLV  107 (468)
T ss_dssp             EEHHHHHHHHHHTT---CCSEEEEEECTT----HHHHHHSSSS----SSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEE
T ss_pred             ccHHHHHHHHHHhc---CCCCEEEEECCC----HHHHHHHhCC----CcEEEeCCccCChHHHHHHHHHHhccCCCeEEE
Confidence            36677788887654   123677775432    2223332111    3566666666788999888888775  689999


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           99 MDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      +++|.. +.+..++.+++.+.+.+.++++.
T Consensus       108 ~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~  137 (468)
T 1hm9_A          108 IAGDTPLITGESLKNLIDFHINHKNVATIL  137 (468)
T ss_dssp             EETTCTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             EeCCccccCHHHHHHHHHHHHhcCCcEEEE
Confidence            999986 67888999998887766666554

>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19

Probab=92.64  E-value=0.52  Score=34.79  Aligned_cols=87  Identities=15%  Similarity=0.211  Sum_probs=59.9

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEE
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIM   99 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~l   99 (242)
                      ....+..+++.+.+.   .. +|+|+-+.  +..    +++.      .+.+   ....|.+.+...|++... +.++++
T Consensus        31 g~pll~~~l~~l~~~---~~-~ivvv~~~--~~i----~~~~------~~~~---~~~~g~~~~i~~a~~~~~-~~~lv~   90 (232)
T 2dpw_A           31 GRPMVEWVLEALYAA---GL-SPVYVGEN--PGL----VPAP------ALTL---PDRGGLLENLEQALEHVE-GRVLVA   90 (232)
T ss_dssp             TEETHHHHHHHHHHT---TC-EEEEESCC--SSC----SSCC------SEEE---CCCSSHHHHHHHHHHTCC-SEEEEE
T ss_pred             CEEHHHHHHHHHHhc---CC-EEEEEeCh--HHH----hhhc------CeEe---cCCCCHHHHHHHHHHHcC-CCEEEE
Confidence            446778888888655   23 78887432  221    1110      2444   445789999999998887 999999


Q ss_pred             eCCCC-CCCCChHHHHHHHHhcCCcEEEEE
Q 026146          100 DADLS-HHPKYLPSFIKKQLETGASIVTGT  128 (242)
Q Consensus       100 D~D~~-~~~~~l~~l~~~~~~~~~~~v~~~  128 (242)
                      ++|.. +++..++.+++ . +.+.+++++.
T Consensus        91 ~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~  118 (232)
T 2dpw_A           91 TGDIPHLTEEAVRFVLD-K-APEAALVYPI  118 (232)
T ss_dssp             ETTCTTCCHHHHHHHHH-H-CCSCSEEEEE
T ss_pred             eCCcccCCHHHHHHHHh-c-CCCCCEEEEE
Confidence            99986 68888999888 5 4456666553

>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*

Probab=92.07  E-value=0.29  Score=40.10  Aligned_cols=88  Identities=10%  Similarity=0.078  Sum_probs=58.7

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-CCEEEEEe
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-GSFVVIMD  100 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~i~~lD  100 (242)
                      ..+..+++.+.+.-   --+++|+-+..    .+.++++...+   .+.++..+...|.+.+...+++... .+++++++
T Consensus        34 pli~~~l~~l~~~~---~~~iivv~~~~----~~~i~~~~~~~---~~~~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~  103 (456)
T 2v0h_A           34 PMVKHVIDTAHQLG---SENIHLIYGHG----GDLMRTHLANE---QVNWVLQTEQLGTAHAVQQAAPFFKDNENIVVLY  103 (456)
T ss_dssp             EHHHHHHHHHHHTT---CSCEEEEECTT----HHHHHHHTTTC---CCEEEECSCCCCHHHHHHHHGGGCCTTSEEEEEE
T ss_pred             cHHHHHHHHHHhCC---CCcEEEEeCCC----HHHHHHHhhcC---CcEEEeCCCCCCcHHHHHHHHHhcCCCCeEEEEc
Confidence            45566777776541   22566665432    23344432221   3566666667788999999998875 79999999


Q ss_pred             CCCC-CCCCChHHHHHHHHh
Q 026146          101 ADLS-HHPKYLPSFIKKQLE  119 (242)
Q Consensus       101 ~D~~-~~~~~l~~l~~~~~~  119 (242)
                      +|.. +++..++.+++.+.+
T Consensus       104 ~D~P~i~~~~i~~l~~~~~~  123 (456)
T 2v0h_A          104 GDAPLITKETLEKLIEAKPE  123 (456)
T ss_dssp             TTCTTCCHHHHHHHHHHCCT
T ss_pred             CCcceeCHHHHHHHHHHHhc
Confidence            9985 678888888887654

>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6

Probab=92.00  E-value=0.54  Score=36.28  Aligned_cols=102  Identities=14%  Similarity=0.202  Sum_probs=60.6

Q ss_pred             eCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH---hCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           16 PTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL---YGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        16 p~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~---~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      |.++ ...+...++.+...   .--+|+||-...  + .+.++++...   + +..+.++..+...|.+.+.-.|++...
T Consensus        30 pi~g-kpli~~~l~~l~~~---gi~~I~vv~~~~--~-~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~a~~~i~  101 (296)
T 1mc3_A           30 PIYD-KPMIYYPLSVLMLA---GIREILIITTPE--D-KGYFQRLLGDGSEF-GIQLEYAEQPSPDGLAQAFIIGETFLN  101 (296)
T ss_dssp             EETT-EETTHHHHHHHHHT---TCCEEEEEECTT--T-HHHHHHHHTTSGGG-TCEEEEEECSSCCCSTHHHHHTHHHHT
T ss_pred             EECC-eeHHHHHHHHHHhC---CCCcEEEEechh--H-HHHHHHHHhccccc-CceEEEeccCCCCCHHHHHHHHHHHhC
Confidence            3444 36777788888653   223677775422  1 2333444332   2 234666666666788889888888775


Q ss_pred             C-CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           93 G-SFVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        93 ~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      . ++++++ +|..+....+..+++.+.+.+.++++
T Consensus       102 ~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~v  135 (296)
T 1mc3_A          102 GEPSCLVL-GDNIFFGQGFSPKLRHVAARTEGATV  135 (296)
T ss_dssp             TSCEEEEE-TTEEEECSSCHHHHHHHTTCCSSEEE
T ss_pred             CCCEEEEE-CCccccccCHHHHHHHHHHcCCCCEE
Confidence            4 455555 89775446778888877544444443

>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0

Probab=91.50  E-value=1.3  Score=32.98  Aligned_cols=95  Identities=18%  Similarity=0.161  Sum_probs=59.5

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC-CCcEEEeeCCCCcchHHHHHHHHhhcC-------
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG-EDRILLRPRPKKLGLGTAYIHGLKHAS-------   92 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~a~n~g~~~a~-------   92 (242)
                      ...+..+++.+.+..  ..-+|+||-+..   ..+.+++....+. ...+.++...  .+...+...|++...       
T Consensus        32 kpll~~~l~~~~~~~--~~~~ivvv~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~sv~~al~~l~~~~~~~~  104 (246)
T 3f1c_A           32 KPIIVHTVEKFILNT--RFDKILISSPKE---WMNHAEDNIKKYISDDRIVVIEGG--EDRNETIMNGIRFVEKTYGLTD  104 (246)
T ss_dssp             EEHHHHHHHHHHTCT--TCSEEEEEECGG---GHHHHHHHHHHHCCCTTEEEEECC--SSHHHHHHHHHHHHHHHTCCCT
T ss_pred             eeHHHHHHHHHHcCC--CCCEEEEEeCHH---HHHHHHHHHHHhCCCCCEEEECCC--CchHHHHHHHHHHHhhhhcCCC
Confidence            356677777775441  123677776532   2233333333332 2246665432  356667777777653       


Q ss_pred             CCEEEEEeCCCC-CCCCChHHHHHHHHhcCC
Q 026146           93 GSFVVIMDADLS-HHPKYLPSFIKKQLETGA  122 (242)
Q Consensus        93 ~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~  122 (242)
                      .++++++|+|.. ++++.+.++++.+.+.+.
T Consensus       105 ~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a  135 (246)
T 3f1c_A          105 DDIIVTHDAVRPFLTHRIIEENIDAALETGA  135 (246)
T ss_dssp             TCEEEEEETTCTTCCHHHHHHHHHHHHHTSE
T ss_pred             CCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence            589999999975 889999999999877553

>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=90.59  E-value=0.5  Score=36.88  Aligned_cols=55  Identities=20%  Similarity=0.158  Sum_probs=42.4

Q ss_pred             cEEEeeCCCCcchHHHHHHHHhhcCC--CEEEEEeCCCCCC-CCChHHHHHHHHhcCC
Q 026146           68 RILLRPRPKKLGLGTAYIHGLKHASG--SFVVIMDADLSHH-PKYLPSFIKKQLETGA  122 (242)
Q Consensus        68 ~~~~~~~~~~~g~~~a~n~g~~~a~~--d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~  122 (242)
                      .+.++..+...|.+.+...|+.....  ++++++.+|..++ +..+..+++.+.+.+.
T Consensus       106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~  163 (323)
T 2pa4_A          106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG  163 (323)
T ss_dssp             EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS
T ss_pred             ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC
Confidence            46666666667999999988887643  4599999999886 5789999988876554

>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*

Probab=90.49  E-value=2.1  Score=31.03  Aligned_cols=87  Identities=10%  Similarity=0.052  Sum_probs=57.2

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-CCCEEEEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-SGSFVVIM   99 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-~~d~i~~l   99 (242)
                      ...+..+++.+.+...  .-+|+|+-+..   ..+.++++..   ...+.++...  .+.+.+...|++.. ..++++++
T Consensus        30 ~pli~~~l~~l~~~~~--~~~i~vv~~~~---~~~~~~~~~~---~~~v~~~~~~--~~~~~~i~~al~~~~~~~~vlv~   99 (223)
T 2xwl_A           30 TPLLEHALSGLRASGV--IDRIVIAVPPA---LTDESKLVFG---GEDSVIVSGG--VDRTESVALALEAAGDAEFVLVH   99 (223)
T ss_dssp             EEHHHHHHHHHHHHSC--CSEEEEEECGG---GHHHHHHHTC---BTTEEEEECC--SSHHHHHHHHHTTCTTCSEEEEC
T ss_pred             eEHHHHHHHHHhcCCC--CCeEEEEEccc---HHHHHHHHhc---cCCeEEEcCC--CCHHHHHHHHHHhcCCCCEEEEE
Confidence            4566778888765421  22677776532   1222333321   1246666543  35678888999887 67999999


Q ss_pred             eCCCC-CCCCChHHHHHHH
Q 026146          100 DADLS-HHPKYLPSFIKKQ  117 (242)
Q Consensus       100 D~D~~-~~~~~l~~l~~~~  117 (242)
                      ++|.. ++++.+..+++.+
T Consensus       100 ~~D~P~~~~~~i~~l~~~~  118 (223)
T 2xwl_A          100 DAARALTPPALIARVVAAL  118 (223)
T ss_dssp             CTTCTTCCHHHHHHHHHHH
T ss_pred             cCCcccCCHHHHHHHHHHH
Confidence            99985 6888999999887

>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*

Probab=90.41  E-value=1.4  Score=32.21  Aligned_cols=93  Identities=14%  Similarity=0.105  Sum_probs=56.3

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--CCEEEEE
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--GSFVVIM   99 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--~d~i~~l   99 (242)
                      ..+..+++.+.+..  .--+|+|+-+..   ..++.+.+...+. ..+.++..  ..|...+...|++...  .++++++
T Consensus        33 pli~~~l~~l~~~~--~~~~ivvv~~~~---~~~~~~~~~~~~~-~~v~~~~~--~~~~~~sv~~al~~~~~~~~~vl~~  104 (228)
T 2yc3_A           33 PIALYSFFTFSRMP--EVKEIVVVCDPF---FRDIFEEYEESID-VDLSFAIP--GKERQDSVYSGLQEIDVNSELVCIH  104 (228)
T ss_dssp             EHHHHHHHHHHHCT--TEEEEEEECCGG---GHHHHHTTTTTSS-SEEEEECC--CSSHHHHHHHHHTTSCTTCSEEEEE
T ss_pred             EHHHHHHHHHHcCC--CCCeEEEEEChH---HHHHHHHHHHhCC-CcEEEECC--CCCHHHHHHHHHHhhccCCCEEEEe
Confidence            34455666665431  123677765422   2233333322221 24555542  3578888888988765  4899999


Q ss_pred             eCCC-CCCCCChHHHHHHHHhcCC
Q 026146          100 DADL-SHHPKYLPSFIKKQLETGA  122 (242)
Q Consensus       100 D~D~-~~~~~~l~~l~~~~~~~~~  122 (242)
                      |+|. .+++..++.+++.+.+.+.
T Consensus       105 d~d~P~~~~~~i~~l~~~~~~~~~  128 (228)
T 2yc3_A          105 DSARPLVNTEDVEKVLKDGSAVGA  128 (228)
T ss_dssp             ETTCTTCCHHHHHHHHHHHHHHSE
T ss_pred             cCCCccCCHHHHHHHHHHHHhcCc
Confidence            9996 4788889999988765443

>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*

Probab=90.36  E-value=1.1  Score=35.86  Aligned_cols=85  Identities=9%  Similarity=0.013  Sum_probs=55.4

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeC
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDA  101 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~  101 (242)
                      ..+..+++.+.+..  ..-+|+|+-+ .    .+.++++.   .  .+.++.  ...|...+...|++....++++++++
T Consensus        32 PLi~~~l~~l~~~~--~~~~IvVvt~-~----~~~i~~~~---~--~v~~v~--~g~g~~~sv~~aL~~l~~d~vlv~~~   97 (371)
T 1w55_A           32 PLWLYATKNLSSFY--PFKKIVVTSS-N----ITYMKKFT---K--NYEFIE--GGDTRAESLKKALELIDSEFVMVSDV   97 (371)
T ss_dssp             EHHHHHHHHHHTTS--CCSCEEEEES-C----HHHHHTTC---S--SSEEEE--CCSSHHHHHHHHHTTCCSSEEEEEET
T ss_pred             EHHHHHHHHHHccC--CCCeEEEEcC-C----HHHHHHHh---C--CCEEEe--CCCChHHHHHHHHHhcCCCeEEEEeC
Confidence            45566777775421  1226777765 2    22333321   1  244443  23467788889998887899999999


Q ss_pred             CCC-CCCCChHHHHHHHHhc
Q 026146          102 DLS-HHPKYLPSFIKKQLET  120 (242)
Q Consensus       102 D~~-~~~~~l~~l~~~~~~~  120 (242)
                      |.. ++++.++++++.+.+.
T Consensus        98 D~Pli~~~~i~~li~~~~~~  117 (371)
T 1w55_A           98 ARVLVSKNLFDRLIENLDKA  117 (371)
T ss_dssp             TCTTCCHHHHHHHHTTGGGC
T ss_pred             CcccCCHHHHHHHHHHHHhc
Confidence            985 6888899998877654

>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*

Probab=90.34  E-value=0.63  Score=34.20  Aligned_cols=96  Identities=15%  Similarity=0.056  Sum_probs=57.5

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC--C-CcEEEeeCCCCcchHHHHHHHHhhc-----
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG--E-DRILLRPRPKKLGLGTAYIHGLKHA-----   91 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~--~-~~~~~~~~~~~~g~~~a~n~g~~~a-----   91 (242)
                      ....+..+++.+.+...  --+|+|+-+...   .+.++++...++  . ....+..  ...|...+...|++..     
T Consensus        30 g~pli~~~l~~l~~~~~--~~~i~vv~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~l~~~~~~~~  102 (236)
T 2vsh_A           30 DRPILIHTIEKFVLEPS--IEKIVVGVHGDW---VSHAEDLVDKYLPLYKERIIITK--GGADRNTSIKNIIEAIDAYRP  102 (236)
T ss_dssp             TEEHHHHHHHHHHTCTT--CCCEEEEECGGG---HHHHHHHHHHHCGGGGGGEEEEE--CCSSHHHHHHHHHHHHHHHSC
T ss_pred             CccHHHHHHHHHHcCCC--CCeEEEEeCHHH---HHHHHHHHHhccccccCceEEEC--CCCchHHHHHHHHHHHHhhcc
Confidence            34566777887765311  225677665322   133443333322  0 1223332  2246777788888766     


Q ss_pred             --CCCEEEEEeCCC-CCCCCChHHHHHHHHhcCC
Q 026146           92 --SGSFVVIMDADL-SHHPKYLPSFIKKQLETGA  122 (242)
Q Consensus        92 --~~d~i~~lD~D~-~~~~~~l~~l~~~~~~~~~  122 (242)
                        ..++++++++|. .+++..+..+++.+.+.+.
T Consensus       103 ~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~  136 (236)
T 2vsh_A          103 LTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA  136 (236)
T ss_dssp             CCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE
T ss_pred             CCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc
Confidence              348999999998 5788899999998876543

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=90.01  E-value=0.23  Score=38.04  Aligned_cols=109  Identities=12%  Similarity=0.028  Sum_probs=61.1

Q ss_pred             cCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchh
Q 026146           91 ASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR  170 (242)
Q Consensus        91 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  170 (242)
                      ...+|+++.|+|+.+..+-|..++..+ ++...+.+|.........    . .....  .... . .... .....|+.+
T Consensus        92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~-d~~~~~YiG~~~~~~~~~----~-~~~~~--~~~~-~-~~~~-~y~~GGaG~  160 (280)
T 2j0a_A           92 SGLRWFCHVDDDNYVNPKALLQLLKTF-PQDRDVYVGKPSLNRPIH----A-SELQS--KQRT-K-LVRF-WFATGGAGF  160 (280)
T ss_dssp             HTCSEEEEEETTEEECHHHHHHHHTTS-CTTSCCEEECEEC----------------------------C-CEECGGGCE
T ss_pred             CCCcEEEEeCCCcEEcHHHHHHHHHhC-CCCCCEEEEEeccCcccc----c-cccCc--cccc-c-cccc-CcccCCCEE
Confidence            478999999999998655555555544 245667777665321100    0 00000  0000 0 0111 223345668


Q ss_pred             hcchHHHHHhhhccc---------CCCcccchHHHHHHH-HcCCceEEee
Q 026146          171 LYKKSVLEDVISSCV---------SKGYVFQMEMIVRAC-RKGYHIEEVP  210 (242)
Q Consensus       171 ~~rr~~~~~~~~~~~---------~~~~~~d~~~~~~~~-~~g~~i~~~p  210 (242)
                      +++|++++++.....         ...+.+|..+..-+. ..|.+....|
T Consensus       161 vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~  210 (280)
T 2j0a_A          161 CINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP  210 (280)
T ss_dssp             EEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred             EECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence            999999999854211         223456888888777 7888877665

>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}

Probab=89.86  E-value=0.091  Score=37.71  Aligned_cols=99  Identities=14%  Similarity=0.152  Sum_probs=57.1

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCC-CcEEEeeCCCCcchHHHHHHHHhhcCCCEEEE
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE-DRILLRPRPKKLGLGTAYIHGLKHASGSFVVI   98 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~-~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~   98 (242)
                      ....+..+++.+.+..   --+|+|+-+...+...+.+.+   .++. ..+.++..+ ..|...+...|++.. .+++++
T Consensus        26 g~pli~~~l~~l~~~~---~~~v~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~~-~~g~~~si~~al~~~-~~~vlv   97 (196)
T 3rsb_A           26 GRCLIDYVVSPLLKSK---VNNIFIATSPNTPKTKEYINS---AYKDYKNIVVIDTS-GKGYIEDLNECIGYF-SEPFLV   97 (196)
T ss_dssp             TEEHHHHHHHHHHSSS---CCCEEEECCTTCHHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC-SSCEEE
T ss_pred             CEEHHHHHHHHHHHCC---CCEEEEEeCCChHHHHHHHHh---hccCCCCEEEEECC-CCCcHHHHHHHHHhC-CCCEEE
Confidence            3467788888886542   226777765433222333322   1221 145555433 456666777777777 899999


Q ss_pred             EeCCCC-CCCCChHHHHHHHHh-----cCCcEEE
Q 026146           99 MDADLS-HHPKYLPSFIKKQLE-----TGASIVT  126 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~-----~~~~~v~  126 (242)
                      +.+|.. +++..+.++++.+.+     .+.+.+.
T Consensus        98 ~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~  131 (196)
T 3rsb_A           98 VSSDLINLKSKIINSIVDYFYCIKAKTPDVEALA  131 (196)
T ss_dssp             EETTEESCCHHHHHHHHHHHHHHHTTCC--CEEE
T ss_pred             EeCCcccCCHHHHHHHHHHHHhhhcccCCCceEE
Confidence            999985 789999999999876     4455444

>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}

Probab=89.68  E-value=1.9  Score=34.87  Aligned_cols=99  Identities=13%  Similarity=0.142  Sum_probs=59.1

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH-hCC------CcEEEeeCCC----C---cchHHHHHHH
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL-YGE------DRILLRPRPK----K---LGLGTAYIHG   87 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~-~~~------~~~~~~~~~~----~---~g~~~a~n~g   87 (242)
                      ..+..+++.+.+.   .--+|+|+-+...+    .++++... +..      ..+.++...+    .   .|.+.+...|
T Consensus        45 pli~~~l~~l~~~---gi~~i~vv~~~~~~----~i~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a  117 (420)
T 3brk_X           45 RIIDFALSNALNS---GIRRIGVATQYKAH----SLIRHLQRGWDFFRPERNESFDILPASQRVSETQWYEGTADAVYQN  117 (420)
T ss_dssp             ETHHHHHHHHHHT---TCCEEEEEECTTCH----HHHHHHHHHSCCCCGGGTCEEEEECCC-------CCCCHHHHHHTT
T ss_pred             cHHHHHHHHHHhC---CCCeEEEEeCCChH----HHHHHHhhhhccccccccCCEEEeCccccccCCccccCCHHHHHHH
Confidence            4566777777654   22367777654322    23333222 221      1244443221    2   6888888888


Q ss_pred             HhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEE
Q 026146           88 LKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGT  128 (242)
Q Consensus        88 ~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~  128 (242)
                      +....   .++++++.+|.+. +..+.++++.+.+.+.++.++.
T Consensus       118 ~~~l~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~~~~~tl~~  160 (420)
T 3brk_X          118 IDIIEPYAPEYMVILAGDHIY-KMDYEYMLQQHVDSGADVTIGC  160 (420)
T ss_dssp             HHHHHHHCCSEEEEEESSCEE-CBCTHHHHHHHHHTTCSEEEEE
T ss_pred             HHHHHhcCCCEEEEecccEEE-chHHHHHHHHHHHcCCeEEEEE
Confidence            77653   4899999999964 4558888888876666665543

>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}

Probab=89.59  E-value=1.8  Score=30.99  Aligned_cols=46  Identities=15%  Similarity=0.101  Sum_probs=35.8

Q ss_pred             EEEeeCC-CCcchHHHHHHHHhhcCCCEEEEEeCCCC-CCCCChHH-HH
Q 026146           69 ILLRPRP-KKLGLGTAYIHGLKHASGSFVVIMDADLS-HHPKYLPS-FI  114 (242)
Q Consensus        69 ~~~~~~~-~~~g~~~a~n~g~~~a~~d~i~~lD~D~~-~~~~~l~~-l~  114 (242)
                      +.++..+ ...|.+.+...|++....++++++.+|.. ++++.++. ++
T Consensus        72 ~~~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~  120 (201)
T 2e8b_A           72 APVVLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE  120 (201)
T ss_dssp             CCEEECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred             ceEEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence            4444433 35689999999999988899999999986 57777777 66

>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*

Probab=88.40  E-value=1.6  Score=32.28  Aligned_cols=94  Identities=16%  Similarity=0.137  Sum_probs=59.5

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC----CCEE
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS----GSFV   96 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~----~d~i   96 (242)
                      ...+..+++.+.+..  .--+|+||-+..   ..+.++++...    .+.++...  .+...+.-.|++...    .+++
T Consensus        35 kpll~~~l~~~~~~~--~~~~ivVv~~~~---~~~~~~~~~~~----~v~~v~gg--~~r~~sv~~gl~~~~~~~~~d~V  103 (231)
T 3q80_A           35 QTLIERAVDGLLDSG--VVDTVVVAVPAD---RTDEARQILGH----RAMIVAGG--SNRTDTVNLALTVLSGTAEPEFV  103 (231)
T ss_dssp             EEHHHHHHHHHHHTS--CCCEEEEEECGG---GHHHHHHHHGG----GCEEEECC--SSHHHHHHHHHGGGC---CCSEE
T ss_pred             eEHHHHHHHHHHhCC--CCCeEEEECChH---HHHHHHHHhcC----CeEEEcCC--CchHHHHHHHHHHhhhcCCCCEE
Confidence            456677788776541  123677776532   22334443322    35555422  245677888888775    4899


Q ss_pred             EEEeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146           97 VIMDADLS-HHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      +++|+|.- ++++.++++++.+.+ +.+.++
T Consensus       104 lv~~~d~Pli~~~~i~~li~~~~~-~~~~~i  133 (231)
T 3q80_A          104 LVHDAARALTPPALVARVVEALRD-GYAAVV  133 (231)
T ss_dssp             EECCTTCTTCCHHHHHHHHHHHHT-TCSEEE
T ss_pred             EEEcCCcCCCCHHHHHHHHHHHhh-cCCeEE
Confidence            99999976 789999999998865 234443

>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*

Probab=88.07  E-value=6.6  Score=31.99  Aligned_cols=99  Identities=17%  Similarity=0.046  Sum_probs=59.5

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHh--C------CCcEEEeeC--C-----CCcchHHHHHH
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY--G------EDRILLRPR--P-----KKLGLGTAYIH   86 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~--~------~~~~~~~~~--~-----~~~g~~~a~n~   86 (242)
                      ..+..+++.+.+.   .--+|+|+-+...+...+.+.   +.+  .      ...+.++..  .     ...|.+.+...
T Consensus        53 pli~~~l~~l~~~---g~~~i~vv~~~~~~~i~~~~~---~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~  126 (451)
T 1yp2_A           53 RLIDIPVSNCLNS---NISKIYVLTQFNSASLNRHLS---RAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGTADAVRQ  126 (451)
T ss_dssp             ETTHHHHHHHHHT---TCCEEEEEESCCCHHHHHHHH---HHCC--------CCEEEEEESCSSTTSCCCCCSHHHHHHH
T ss_pred             eeHHHHHHHHHHC---CCCEEEEEeccCHHHHHHHHh---hhhhcccccccccCcEEEecccccccccccccCcHHHHHH
Confidence            5667778887654   123677776543322222222   211  0      012344431  1     13688888888


Q ss_pred             HHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146           87 GLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        87 g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ++....   .+.++++.+|.+.+ ..+..+++.+.+.+.++.++
T Consensus       127 a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~~~tl~  169 (451)
T 1yp2_A          127 YLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRETDADITVA  169 (451)
T ss_dssp             THHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHHcCCcEEEE
Confidence            887764   58999999998654 45888988877666666443

>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*

Probab=87.66  E-value=4.1  Score=30.22  Aligned_cols=49  Identities=8%  Similarity=-0.067  Sum_probs=36.5

Q ss_pred             CCcchHHHHHHHHhhc-CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEE
Q 026146           76 KKLGLGTAYIHGLKHA-SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV  125 (242)
Q Consensus        76 ~~~g~~~a~n~g~~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v  125 (242)
                      ...|.+.+...+.... ..+.++++.+|.+ .+..+..+++.+.+.+.++.
T Consensus       104 ~~~gt~~al~~a~~~~~~~~~~lv~~~D~~-~~~~~~~~~~~~~~~~~~~t  153 (259)
T 1tzf_A          104 DSSMTGGRLKRVAEYVKDDEAFLFTYGDGV-ADLDIKATIDFHKAHGKKAT  153 (259)
T ss_dssp             SSCCHHHHHHHTGGGTTTSSCEEEEETTEE-ECCCHHHHHHHHHHHCCSEE
T ss_pred             cccCcHHHHHHHHHhcCCCCcEEEEECCEe-cccCHHHHHHHHHHhCCeEE
Confidence            3568888888888776 4578889999985 45678888888766555543

>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}

Probab=85.68  E-value=4.7  Score=30.15  Aligned_cols=89  Identities=11%  Similarity=0.099  Sum_probs=54.0

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCc-EEEeeCCCCcchHHHHHHHHhhc------CC
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDR-ILLRPRPKKLGLGTAYIHGLKHA------SG   93 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~-~~~~~~~~~~g~~~a~n~g~~~a------~~   93 (242)
                      ...|..+++++.+...  .-+++||-....+ ..+.+++.....+... ..++..+...|.+.|...|+...      ..
T Consensus        30 kpli~~~l~~l~~~~g--i~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~~a~~~l~~~~~~~~  106 (255)
T 4evw_A           30 QTLFEHSVNSFAAYFA--STPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQ  106 (255)
T ss_dssp             EEHHHHHHGGGGGGTT--TSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEESSCCSSHHHHHHHHHHHHHHTTCCCC
T ss_pred             eEHHHHHHHHHhccCC--CceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEeCCCCCCHHHHHHHHHHHHhhcccCCC
Confidence            3677888888765211  2255555543333 5555655444432122 23444556779999999998876      35


Q ss_pred             CEEEEEeCCCCCCCCChHH
Q 026146           94 SFVVIMDADLSHHPKYLPS  112 (242)
Q Consensus        94 d~i~~lD~D~~~~~~~l~~  112 (242)
                      +-++++.+|..+....+..
T Consensus       107 ~~~lV~~gD~l~~~~~~~~  125 (255)
T 4evw_A          107 GSITVFNIDTFRPNFVFPD  125 (255)
T ss_dssp             SCEEECCTTEECTTCCCCG
T ss_pred             CcEEEEeCCEEEecchhHH
Confidence            6689999998775444443

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*

Probab=81.71  E-value=3.3  Score=32.06  Aligned_cols=93  Identities=15%  Similarity=0.115  Sum_probs=55.2

Q ss_pred             ccccHHHHHHHH-HhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCC--------cc----hHHHHHH
Q 026146           20 ERLNIALIVYLI-FKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKK--------LG----LGTAYIH   86 (242)
Q Consensus        20 ~~~~l~~~l~sl-~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~--------~g----~~~a~n~   86 (242)
                      -...+.-++.|+ .+.. ..++.++|++++-+++..+.++++...++ ..+.++.-+..        .+    ....+-.
T Consensus        11 Y~~~~~vli~Sl~l~~~-~~~~~f~il~~~ls~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~   88 (311)
T 1g9r_A           11 YAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGG-GNIRFIDVNPEDFAGFPLNIRHISITTYARLK   88 (311)
T ss_dssp             GHHHHHHHHHHHHHTCT-TSCCEEEEEESSCCHHHHHHHHHHSGGGT-TTEEEEECCGGGGTTSCCCCTTCCGGGGGGGG
T ss_pred             HHHHHHHHHHHHHHHcC-CCCceEEEEECCCCHHHHHHHHHHHHHcC-CEEEEEEcCHHHHhcCccccccCCHHHHHHHH
Confidence            345556677777 5543 25678888888877777787887765543 45666542210        11    1122222


Q ss_pred             HHhh-cCCCEEEEEeCCCCCCCCChHHHHH
Q 026146           87 GLKH-ASGSFVVIMDADLSHHPKYLPSFIK  115 (242)
Q Consensus        87 g~~~-a~~d~i~~lD~D~~~~~~~l~~l~~  115 (242)
                      ..+. ...+-+++||+|.++-.+ +.++.+
T Consensus        89 l~~ll~~~~kvlyLD~D~iv~~d-i~eL~~  117 (311)
T 1g9r_A           89 LGEYIADCDKVLYLDIDVLVRDS-LTPLWD  117 (311)
T ss_dssp             HHHHCCSCSCEEEECSSEEECSC-CHHHHT
T ss_pred             HHHHhhhcCEEEEEcCCeEeccC-HHHHhc
Confidence            2222 246889999999887654 555554

>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*

Probab=80.54  E-value=0.68  Score=34.08  Aligned_cols=84  Identities=12%  Similarity=0.113  Sum_probs=49.2

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCC-cchHHHHHHHHhhcCCCEEEEEe
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKK-LGLGTAYIHGLKHASGSFVVIMD  100 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~-~g~~~a~n~g~~~a~~d~i~~lD  100 (242)
                      ..+..+++.+.+.    --+|+|+- ...   .++.+.+.+.+ +..+.++..+.. .|.+.+...|++... +.++++.
T Consensus        46 pli~~~l~~l~~~----~~~i~vv~-~~~---~~~~~~~~~~~-~~~~~~v~~~~~~~g~~~~i~~a~~~~~-~~~lv~~  115 (232)
T 2xme_A           46 EIILRTMKLLSPH----VSEFIIVA-SRY---ADDIDAFLKDK-GFNYKIVRHDRPEKGNGYSLLVAKNHVE-DRFILTM  115 (232)
T ss_dssp             EHHHHHHHHHGGG----EEEEEEEE-STT---HHHHHHHHTTS-CCCEEEEECSCGGGCHHHHHHTTGGGCC-SSEEEEE
T ss_pred             EHHHHHHHHHHHh----CCEEEEEe-CCh---HHHHHHHHHhc-CCcEEEEECCCCCCCcHHHHHHHHHHCC-CCEEEEc
Confidence            4455566666443    12566665 222   23333333322 235777775543 688889999988877 4566788


Q ss_pred             CCCCCCCCChHHHHH
Q 026146          101 ADLSHHPKYLPSFIK  115 (242)
Q Consensus       101 ~D~~~~~~~l~~l~~  115 (242)
                      +|..++++.++.+++
T Consensus       116 ~D~p~~~~~~~~l~~  130 (232)
T 2xme_A          116 GDHVYSQQFIEKAVR  130 (232)
T ss_dssp             TTEEECHHHHHHHTT
T ss_pred             CCcccCHHHHHHHHh
Confidence            997766555555543

>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21

Probab=80.50  E-value=5.6  Score=28.63  Aligned_cols=54  Identities=22%  Similarity=0.145  Sum_probs=40.5

Q ss_pred             EEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEE
Q 026146           69 ILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTR  129 (242)
Q Consensus        69 ~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~  129 (242)
                      +.++..+  .|.+.++..|++.. .+.++++-+|.- ++++.++.+++    .+.+.++++.
T Consensus        67 ~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~----~~~~~vv~p~  121 (211)
T 2i5e_A           67 ARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS----TEKDVCIVPG  121 (211)
T ss_dssp             SEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT----CSSSEEEEEC
T ss_pred             CEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc----cCCCeEEEEe
Confidence            5566655  68889999998877 688999999988 68888888776    3455665543

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*

Probab=80.29  E-value=4.9  Score=31.50  Aligned_cols=19  Identities=32%  Similarity=0.144  Sum_probs=14.6

Q ss_pred             hcCCCEEEEEeCCCCCCCC
Q 026146           90 HASGSFVVIMDADLSHHPK  108 (242)
Q Consensus        90 ~a~~d~i~~lD~D~~~~~~  108 (242)
                      ....+-|++||+|.++-.+
T Consensus        92 l~~ydrvlYLDaD~lv~~d  110 (333)
T 1ll2_A           92 LTQYSKCVFMDADTLVLAN  110 (333)
T ss_dssp             CTTCSEEEEECTTEEECSC
T ss_pred             hcCCCeEEEEeCCEEeccC
Confidence            3457899999999886544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	242
d2bo4a1	381	c.68.1.18 (A:2-382) Mannosylglycerate synthase, MG	4e-25
d1omza_	265	c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransf	8e-14
d1xhba2	328	c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa	6e-11
d1qg8a_	255	c.68.1.1 (A:) Spore coat polysaccharide biosynthes	5e-10

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Length = 381

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

 Score = 99.7 bits (248), Expect = 4e-25
 Identities = 29/225 (12%), Positives = 64/225 (28%), Gaps = 23/225 (10%)

Query: 13  IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR 72
           ++ P  +E   + L    +      V  E++ +        + V +   ++       + 
Sbjct: 3   VVFPFKHEHPEVLLHNVRVAAAHPRVH-EVLCIGYERDQTYEAVERAAPEISRATGTPVS 61

Query: 73  PRP----------KKLGLGTAYIHGLKHASGSFVVIMDADL-SHHPKYLPSFIKKQLETG 121
            R           K  G+ TA  + L+      +   DAD+ S  P ++    +      
Sbjct: 62  VRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGY 121

Query: 122 ASIVT-GTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV 180
             +     R      +  W + R   +        +     +    G   L ++ V   +
Sbjct: 122 GLVRHYFPRASTDAMIT-WMITRTGFALLWPHTELS----WIEQPLGGELLMRREVAAML 176

Query: 181 ISSC---VSKGYVFQMEMIVRACRKGYHIEEVPI--TFVDRVFGS 220
                      +           ++G  I E  I      R++G 
Sbjct: 177 YEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGG 221

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Length = 265

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.0 bits (162), Expect = 8e-14
 Identities = 21/171 (12%), Positives = 49/171 (28%), Gaps = 9/171 (5%)

Query: 9   NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDR 68
           + +++I+ TYN    +  ++      +  +   I+V ++    G +E    L    G   
Sbjct: 3   DSFTLIMQTYNRTDLLLRLLNHYQA-VPSLHKVIVVWNNVGEKGPEE----LWNSLGPHP 57

Query: 69  ILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGT 128
           I +  +P+        +        + V+++D D     + L        +    I+   
Sbjct: 58  IPVIFKPQTANKMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFV 117

Query: 129 RYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLED 179
                    G         +              S +      +    LE 
Sbjct: 118 PRKHVSTSSGIYSYGGFELQTPG----PGNGDQYSMVLIGASFFNSKYLEL 164

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.2 bits (142), Expect = 6e-11
 Identities = 35/231 (15%), Positives = 78/231 (33%), Gaps = 21/231 (9%)

Query: 12  SIIIPTYNERLNIAL--IVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
           S++I  +NE  +  L  +  +I +  R +  EI++VDD S     +   +      +  +
Sbjct: 25  SVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPV 84

Query: 70  LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTR 129
            +    ++ GL  A + G   + G  +  +DA       +L   + +      ++V    
Sbjct: 85  HVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPII 144

Query: 130 YV-------------RSGGVHGWNLMRKLTSRGANVLAQTLLWP----GVSDLTGSFRLY 172
            V              + G   W L  +        + +             + G     
Sbjct: 145 DVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSI 204

Query: 173 KKSVLEDV--ISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSS 221
            +   +++    + +       +E+  R  + G  +E V  + V  VF  +
Sbjct: 205 DRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA 255

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Length = 255

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

 Score = 55.9 bits (133), Expect = 5e-10
 Identities = 28/209 (13%), Positives = 57/209 (27%), Gaps = 10/209 (4%)

Query: 10  KYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
           K S+I+ +YN+   +A  +  I       DFE+ ++DD S + T  V++           
Sbjct: 2   KVSVIMTSYNKSDYVAKSISSILSQTFS-DFELFIMDDNSNEETLNVIRPFLNDNRVRFY 60

Query: 70  LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTR 129
                  K          L + +           +            ++           
Sbjct: 61  QSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKA 120

Query: 130 YVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC----- 184
            + S          +   +     A  + W     +     +++ SVLE V         
Sbjct: 121 VIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWD 180

Query: 185 --VSKGYVFQMEMIVRACRKG--YHIEEV 209
              +   +       R       Y ++E 
Sbjct: 181 ESPAFYRIGDARFFWRVNHFYPFYPLDEE 209

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	242
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	100.0
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	99.97
d1omza_	265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	99.9
d2bo4a1	381	Mannosylglycerate synthase, MGS {Rhodothermus mari	99.82
d1pzta_	271	beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos	98.86
d1fo8a_	343	N-acetylglucosaminyltransferase I {Rabbit (Oryctol	98.53
d1v82a_	252	Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (	97.56
d3cu0a1	261	1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo	97.44
d1fxoa_	292	RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]}	95.75
d1qwja_	228	CMP acylneuraminate synthetase {Mouse (Mus musculu	95.49
d1mc3a_	291	RffH {Escherichia coli [TaxId: 562]}	95.36
d1lvwa_	295	RmlA (RfbA) {Archaeon Methanobacterium thermoautot	94.96
d1e5ka_	188	Molybdenum cofactor biosynthesis protein MobA {Esc	92.03
d1w77a1	226	4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me)	91.89
d1w55a1	205	IspD/IspF bifunctional enzyme, CDP-me synthase dom	91.47
d1h7ea_	245	CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn	91.26
d1vgwa_	226	4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me)	89.97
d1g97a2	250	N-acetylglucosamine 1-phosphate uridyltransferase	88.76
d1i52a_	225	4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me)	88.71
d2dpwa1	231	Uncharacterized protein TTHA0179 {Thermus thermoph	88.54
d1eyra_	225	CMP acylneuraminate synthetase {Neisseria meningit	83.21
d1vica_	255	CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn	82.05
d2oi6a2	248	N-acetylglucosamine 1-phosphate uridyltransferase	80.47

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.1e-38  Score=247.68  Aligned_cols=214  Identities=16%  Similarity=0.167  Sum_probs=160.2

Q ss_pred             CCCCcEEEEEeCcccc-ccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChH-HHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146            6 KNKNKYSIIIPTYNER-LNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQ-EVVKQLQQLYGEDRILLRPRPKKLGLGT   82 (242)
Q Consensus         6 ~~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~-~~l~~~~~~~~~~~~~~~~~~~~~g~~~   82 (242)
                      .++|.||||||+||+. ..|.+||+|+.+|+++ ...|||||||||+|+|. +.++++.+..+ ..+++++.++|.|.+.
T Consensus        19 ~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~-~~i~vi~~~~n~G~~~   97 (328)
T d1xhba2          19 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK-VPVHVIRMEQRSGLIR   97 (328)
T ss_dssp             SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS-SCEEEEECSSCCCHHH
T ss_pred             CCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcC-CCeEEEEecccccchH
Confidence            4679999999999976 5799999999999764 34699999999999865 66777766654 4799999999999999


Q ss_pred             HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCc-------------cCchhhHHHHHhH
Q 026146           83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGV-------------HGWNLMRKLTSRG  149 (242)
Q Consensus        83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-------------~~~~~~~~~~~~~  149 (242)
                      |+|.|++.|+||||+|+|+|+.+.|+||+.++..+++++..++++.........             ..+.+........
T Consensus        98 a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (328)
T d1xhba2          98 ARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVP  177 (328)
T ss_dssp             HHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECC
T ss_pred             HHHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccc
Confidence            999999999999999999999999999999999998877777766543222110             0000000000000


Q ss_pred             HHHHHHHHh----CCCccccccchhhcchHHHHHhhhcccCCC-c-ccchHHHHHHHHcCCceEEeeeeeeeccCCC
Q 026146          150 ANVLAQTLL----WPGVSDLTGSFRLYKKSVLEDVISSCVSKG-Y-VFQMEMIVRACRKGYHIEEVPITFVDRVFGS  220 (242)
Q Consensus       150 ~~~~~~~~~----~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~-~-~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~  220 (242)
                      .........    ........|+++++||++|+++|+|++... + +||.||++|+.+.|+++.++|.+.++|.++.
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~H~~~~  254 (328)
T d1xhba2         178 QREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRK  254 (328)
T ss_dssp             HHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC--
T ss_pred             hhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEEEeCCC
Confidence            011111111    112445778888999999999999987554 3 6999999999999999999998877765544

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.97  E-value=2.1e-31  Score=203.55  Aligned_cols=195  Identities=16%  Similarity=0.204  Sum_probs=143.1

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--------CCcch
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--------KKLGL   80 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--------~~~g~   80 (242)
                      |+||||||+||+++.|.++|+|+++|+. +++|||||||||+|+|.++++++.+.   .++++++.+        ++.|.
T Consensus         1 P~vSiiip~yN~~~~l~~~l~Si~~Qt~-~~~eiivvdd~S~d~t~~~l~~~~~~---~~i~~~~~~~~~~~~~~~~~g~   76 (255)
T d1qg8a_           1 PKVSVIMTSYNKSDYVAKSISSILSQTF-SDFELFIMDDNSNEETLNVIRPFLND---NRVRFYQSDISGVKERTEKTRY   76 (255)
T ss_dssp             CCEEEEEEESSCTTTHHHHHHHHHTCSC-CCEEEEEEECSCCHHHHHHHGGGGGS---TTEEEEECCCCSHHHHHSSCHH
T ss_pred             CEEEEEEecCCCHHHHHHHHHHHHhCCC-CCeEEEEEECCCCccHHHHHHHhhhh---cccccccccccccccccccchh
Confidence            7899999999999999999999999976 58999999999999999999988654   358887764        68899


Q ss_pred             HHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhc-CCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhC
Q 026146           81 GTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET-GASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLW  159 (242)
Q Consensus        81 ~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (242)
                      ++|+|.|++.|+|+|++|+|+|+.+.|++++.+++.++++ +.+++.+........... .........     ......
T Consensus        77 ~~a~N~gi~~a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~  150 (255)
T d1qg8a_          77 AALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENR-DIVKETVRP-----AAQVTW  150 (255)
T ss_dssp             HHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEEEEC-----CCSCBS
T ss_pred             cccccccccccccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCC-cEeeeeccc-----chhhhh
Confidence            9999999999999999999999999999999999998764 577777644322111000 000000000     000011


Q ss_pred             CCccccccchhhcchHHHHHhhhc-----cc--CCCcccchHHHHHHHHcCCceEEeeeeee
Q 026146          160 PGVSDLTGSFRLYKKSVLEDVISS-----CV--SKGYVFQMEMIVRACRKGYHIEEVPITFV  214 (242)
Q Consensus       160 ~~~~~~~g~~~~~rr~~~~~~~~~-----~~--~~~~~~d~~~~~~~~~~g~~i~~~p~~~~  214 (242)
                      .......++++++|++++++++..     .+  .....+|++|++|+. .++++.+++....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~-~~~~~~~i~~~l~  211 (255)
T d1qg8a_         151 NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVN-HFYPFYPLDEELD  211 (255)
T ss_dssp             CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHT-TTCCBEEEEEEEE
T ss_pred             hhcccccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHH-cCCCEEEecCCEE
Confidence            122234566678999999998542     22  223367999999987 4678888886543

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=9.7e-27  Score=176.60  Aligned_cols=117  Identities=13%  Similarity=0.061  Sum_probs=93.9

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHH
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHG   87 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g   87 (242)
                      +-++||||||||+++.|.+||+||.+|+. ++ ++|||||+|+|++.+.+.+.....   ...++...+|.|.+.|+|.|
T Consensus         2 ~~~~tvii~tyn~~~~l~~~l~sl~~q~~-~~-~~iiV~d~~sd~~~~~i~~~~~~~---~~~~~~~~~~~g~~~a~n~~   76 (265)
T d1omza_           2 LDSFTLIMQTYNRTDLLLRLLNHYQAVPS-LH-KVIVVWNNVGEKGPEELWNSLGPH---PIPVIFKPQTANKMRNRLQV   76 (265)
T ss_dssp             TTCEEEEEEESSCHHHHHHHHHHHTTSTT-EE-EEEEEECCTTCCCTHHHHHHTCCC---SSCEEEEECSSCCGGGGGSC
T ss_pred             CCcEEEEEEcCCCHHHHHHHHHHHHcCCC-cC-eEEEEECCCCCccHHHHHHHhccc---ceEEEEecCCCCchhhhhhh
Confidence            35899999999999999999999999964 34 667777777766666555543322   23344445688999999999


Q ss_pred             HhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEE
Q 026146           88 LKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTR  129 (242)
Q Consensus        88 ~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~  129 (242)
                      ++.|+||||+|+|+|+.++|++|+.+++.+++++.+++.+..
T Consensus        77 ~~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~  118 (265)
T d1omza_          77 FPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVP  118 (265)
T ss_dssp             CTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESCE
T ss_pred             HHhCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcceeccc
Confidence            999999999999999999999999999999887777776543

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

Probab=99.82  E-value=5e-20  Score=144.87  Aligned_cols=195  Identities=15%  Similarity=0.106  Sum_probs=123.7

Q ss_pred             EEEEeCccccc-cHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH---hCCCcEEEeeC----CCCcchH--
Q 026146           12 SIIIPTYNERL-NIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL---YGEDRILLRPR----PKKLGLG--   81 (242)
Q Consensus        12 siiip~~n~~~-~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~---~~~~~~~~~~~----~~~~g~~--   81 (242)
                      .||||+||++. .+..+++ +..... .-.+|+|+||+|+|.+..+.+...+.   .+ ..+.....    ..+.|++  
T Consensus         2 lVVIP~~NEe~~il~~~v~-~~a~~P-~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~-~~v~~~~~~~l~~~~~GKG~g   78 (381)
T d2bo4a1           2 LVVFPFKHEHPEVLLHNVR-VAAAHP-RVHEVLCIGYERDQTYEAVERAAPEISRATG-TPVSVRLQERLGTLRPGKGDG   78 (381)
T ss_dssp             EEEEECCSSCHHHHHHHHH-HHHHST-TCCEEEEEESSCCHHHHHHHHHHHHHHHHHS-CCEEEEECCCCSSSSSSHHHH
T ss_pred             EEEEEcCCCcHHHHHHHHH-HHHhCC-CeeEEEEEcCCCCCcHHHHHHHhhhhhcccc-ccchhhhhcccccccCCCcHH
Confidence            48999999874 4445554 434322 23366666666666555544433221   22 12222211    2244555  


Q ss_pred             --HHHHHHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHh
Q 026146           82 --TAYIHGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLL  158 (242)
Q Consensus        82 --~a~n~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (242)
                        .|+..|++.++||+++|+|+|.. .+|+++..++..++ .+.|++.|.......   .....+.+.......+.....
T Consensus        79 ~~~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~-~g~d~V~g~y~R~~~---~grvt~~l~~pll~~l~~~~~  154 (381)
T d2bo4a1          79 MNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAAD-FGYGLVRHYFPRAST---DAMITWMITRTGFALLWPHTE  154 (381)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHH-TTCSEEEEECCCCTT---SCHHHHHTHHHHHHHHCTTSS
T ss_pred             HHHHHHHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHh-hhcCeEEEeeccccC---CCceehHhhHHHHHHHhhhhc
Confidence              45666778899999999999985 78999999999986 479999884321111   112222222222222222122


Q ss_pred             CCCccccccchhhcchHHHHHhhhc---ccCCCcccchHHHHHHHHcCCceEEeeeee
Q 026146          159 WPGVSDLTGSFRLYKKSVLEDVISS---CVSKGYVFQMEMIVRACRKGYHIEEVPITF  213 (242)
Q Consensus       159 ~~~~~~~~g~~~~~rr~~~~~~~~~---~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~  213 (242)
                      ..++.++.||..+++|++++.+...   ....+|+.|.++...+.+.|++|..+|...
T Consensus       155 ~~~i~dPl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~  212 (381)
T d2bo4a1         155 LSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPE  212 (381)
T ss_dssp             GGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTT
T ss_pred             ccccccCCcccceeeHHHHHHhhhhccccccCCcccchHHHHHHHHcCCeEEecCCCH
Confidence            3346678899999999999998433   235689999999999999999999998654

>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: beta 1,4 galactosyltransferase (b4GalT1)
domain: beta 1,4 galactosyltransferase (b4GalT1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.86  E-value=4.5e-09  Score=78.23  Aligned_cols=151  Identities=16%  Similarity=0.109  Sum_probs=101.8

Q ss_pred             CCCcEEEEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146            7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY   84 (242)
Q Consensus         7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~   84 (242)
                      ...+++||||-+|+++.|...+..+......  .+++|+||+...+.                         .+..+..+
T Consensus        47 ~~~kvaIIIPyRdR~~hL~~fl~~l~~~L~~q~~~y~I~vieQ~~~~-------------------------~FNRg~ll  101 (271)
T d1pzta_          47 SPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQLDYGIYVINQAGES-------------------------MFNRAKLL  101 (271)
T ss_dssp             CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSS-------------------------CCCHHHHH
T ss_pred             ccceEEEEEecCChHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCc-------------------------chhhhhhh
Confidence            4568999999999999888777776554322  57999999885422                         35678889


Q ss_pred             HHHHhhcC----CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCC
Q 026146           85 IHGLKHAS----GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWP  160 (242)
Q Consensus        85 n~g~~~a~----~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (242)
                      |.|+..|.    .++++|-|.|..+..+...-     .-.+...      ...     ..+            .......
T Consensus       102 NiGf~~a~~~~~~~~~ifHDVDllP~~~~~~Y-----~~~~~p~------h~~-----~~~------------~~~~~~~  153 (271)
T d1pzta_         102 NVGFKEALKDYDYNCFVFSDVDLIPMNDHNTY-----RCFSQPR------HIS-----VAM------------DKFGFSL  153 (271)
T ss_dssp             HHHHHHHHHHSCCCEEEEECTTEEESBTTSCC-----SCCSSCE------ECC-----CEE------------GGGTTSC
T ss_pred             hHHHHHhhhccCccEEEEecCCcCcccccccc-----cccccCc------cee-----eec------------ccccccc
Confidence            99888763    57799999997754443210     0000000      000     000            0001122


Q ss_pred             CccccccchhhcchHHHHHhhhccc-CCCc-ccchHHHHHHHHcCCceEEee
Q 026146          161 GVSDLTGSFRLYKKSVLEDVISSCV-SKGY-VFQMEMIVRACRKGYHIEEVP  210 (242)
Q Consensus       161 ~~~~~~g~~~~~rr~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~g~~i~~~p  210 (242)
                      ......||..+++++-|++++||.. ..+| +||.|+..|+..+|+++...+
T Consensus       154 ~y~~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~  205 (271)
T d1pzta_         154 PYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPN  205 (271)
T ss_dssp             SCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCC
T ss_pred             ccccccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccC
Confidence            2345678888999999999999865 5677 689999999999999988654

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: N-acetylglucosaminyltransferase I
domain: N-acetylglucosaminyltransferase I
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.53  E-value=1.2e-07  Score=72.47  Aligned_cols=106  Identities=12%  Similarity=0.144  Sum_probs=72.2

Q ss_pred             CcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC------------
Q 026146            9 NKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP------------   75 (242)
Q Consensus         9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~------------   75 (242)
                      +-|-|+|.+||++ .+.++|++|+++... ..+.|+|..||+.+++.+.++++.+     .+.++...            
T Consensus         2 ~viPVlv~a~NRP-~l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~~~~v~~~~~-----~v~~I~~~~~~~~~~~~~~~   75 (343)
T d1fo8a_           2 AVIPILVIACDRS-TVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGS-----AVTHIRQPDLSNIAVQPDHR   75 (343)
T ss_dssp             CCCCEEEEESSCT-THHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGG-----GSEEEECSCCCCCCCCTTCG
T ss_pred             CcccEEEEEcCHH-HHHHHHHHHHhcCccccCccEEEEecCCchhHHHHHHHHHH-----HHHHhcCCccccceecchhh
Confidence            4577999999997 799999999887432 4567999999998888777776633     23333211            


Q ss_pred             ---CCcchHHH----HHHHHhhcCCCEEEEEeCCCCCCCCChH---HHHHHHHhc
Q 026146           76 ---KKLGLGTA----YIHGLKHASGSFVVIMDADLSHHPKYLP---SFIKKQLET  120 (242)
Q Consensus        76 ---~~~g~~~a----~n~g~~~a~~d~i~~lD~D~~~~~~~l~---~l~~~~~~~  120 (242)
                         .|.|.+..    ++..++....+.+++|.+|..+.|+++.   .++..+++.
T Consensus        76 k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~~~~~D  130 (343)
T d1fo8a_          76 KFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKAD  130 (343)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHC
T ss_pred             cccchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHHHHhcC
Confidence               12333333    3333333346899999999999999985   444555443

>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=0.00017  Score=51.97  Aligned_cols=100  Identities=13%  Similarity=0.090  Sum_probs=63.6

Q ss_pred             CCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCC--CCChHHHHHHHHHHhCCCcEEEeeCCCCc------
Q 026146            8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGS--PDGTQEVVKQLQQLYGEDRILLRPRPKKL------   78 (242)
Q Consensus         8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s--~d~t~~~l~~~~~~~~~~~~~~~~~~~~~------   78 (242)
                      .|.|-+|.|||.+...... |..|.+.+.. +++.+|||+|+.  ++.+.++|++.     +...+.+..+.+.      
T Consensus         1 lp~I~vVTPTy~R~~Q~~~-LtRLa~TL~lVp~l~WIVVEda~~~t~~va~lL~~s-----gl~y~HL~~~~p~~~~~~~   74 (252)
T d1v82a_           1 LPTIHVVTPTYSRPVQKAE-LTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDT-----GLNYTHLHVETPRNYKLRG   74 (252)
T ss_dssp             CCEEEEEEEECCSTTHHHH-HHHHHHHHTTCSSEEEEEEESSSSCCHHHHHHHHHH-----CCEEEEEECCCCHHHHCCC
T ss_pred             CCCEEEECCCCCchhhHHH-HHHHHhHHhcCCCceEEEEeCCCCCCHHHHHHHHHc-----CCceEeeccCCCccccccc
Confidence            3789999999998644332 3344333333 689999999754  34466666664     3344444322110      


Q ss_pred             --------chHHHHHHHHhhcC---------CCEEEEEeCCCCCCCCChHHH
Q 026146           79 --------GLGTAYIHGLKHAS---------GSFVVIMDADLSHHPKYLPSF  113 (242)
Q Consensus        79 --------g~~~a~n~g~~~a~---------~d~i~~lD~D~~~~~~~l~~l  113 (242)
                              -....+|.|++..+         .-+|.|.|+|...+.++++++
T Consensus        75 ~~~~~~~~rg~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdem  126 (252)
T d1v82a_          75 DARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM  126 (252)
T ss_dssp             -----CCCTTHHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHH
T ss_pred             ccccccccccHHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHH
Confidence                    12358999998652         367899999998888777664

>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: 1,3-Glucuronyltransferase I (glcAT-I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00032  Score=50.61  Aligned_cols=98  Identities=11%  Similarity=0.033  Sum_probs=61.4

Q ss_pred             cEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCC--CCChHHHHHHHHHHhCCCcEEEeeCCCCc--------
Q 026146           10 KYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGS--PDGTQEVVKQLQQLYGEDRILLRPRPKKL--------   78 (242)
Q Consensus        10 ~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s--~d~t~~~l~~~~~~~~~~~~~~~~~~~~~--------   78 (242)
                      .|-||.|||-+...... |..|.+.+.. +++.+|||+|+.  ++.+.++|++.     +...+.+..+.+.        
T Consensus         2 TIyvVTPTY~R~~Q~a~-LtRLa~TL~lVp~l~WIVVEDa~~~t~~v~~lL~~s-----gl~y~HL~~~tp~~~~~~~~~   75 (261)
T d3cu0a1           2 TIYVVTPTYARLVQKAE-LVRLSQTLSLVPRLHWLLVEDAEGPTPLVSGLLAAS-----GLLFTHLVVLTPKAQRLREGE   75 (261)
T ss_dssp             EEEEEEEECCSTTHHHH-HHHHHHHHTTSSSEEEEEEESSSSCCHHHHHHHHHH-----CSEEEEEECCCC---------
T ss_pred             eEEEECCCCCCchhHHH-HHHHHHHHhcCCCeeEEEEECCCCCCHHHHHHHHHc-----CCceEEeecCCchhhcccccC
Confidence            57899999998644332 3333333232 679999998754  33455555554     3344444322110        


Q ss_pred             ------chHHHHHHHHhhcC-----------------CCEEEEEeCCCCCCCCChHHH
Q 026146           79 ------GLGTAYIHGLKHAS-----------------GSFVVIMDADLSHHPKYLPSF  113 (242)
Q Consensus        79 ------g~~~a~n~g~~~a~-----------------~d~i~~lD~D~~~~~~~l~~l  113 (242)
                            -....||.|++..+                 .-+|.|.|+|...+...++++
T Consensus        76 ~~~~~prgv~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~em  133 (261)
T d3cu0a1          76 PGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM  133 (261)
T ss_dssp             --CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred             cccccccCHHHHHHHHHHHHHcccccccccccccCCCceEEEEecCCCcccHHHHHHH
Confidence                  11358999998874                 257889999999988877774

>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: glucose-1-phosphate thymidylyltransferase
domain: RmlA (RfbA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.75  E-value=0.024  Score=41.97  Aligned_cols=105  Identities=12%  Similarity=0.125  Sum_probs=72.0

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      +|.++. +.|...|+.|..+   .--+|+||.+...   .+.++++...  .-+.++.++..+...|.+.|...+.+...
T Consensus        27 lpi~gk-PiI~~~l~~l~~~---Gi~ei~ii~~~~~---~~~i~~~~~~~~~~g~~I~y~~q~~~~Gta~ai~~a~~~i~   99 (292)
T d1fxoa_          27 LPVYDK-PMIYYPLSTLMLA---GIREILIISTPQD---TPRFQQLLGDGSNWGLDLQYAVQPSPDGLAQAFLIGESFIG   99 (292)
T ss_dssp             SEETTE-ETTHHHHHHHHHT---TCCEEEEEECTTT---HHHHHHHHTTSGGGTCEEEEEECSSCCCGGGHHHHTHHHHT
T ss_pred             CEECCE-ehHHHHHHHHHHC---CCCEEEEEeCcCC---HHHHHHHhccccccCeEEEEccCCCCCcHHHHHHhhhhhcC
Confidence            466665 7888899988765   2347777766432   3344444332  11357888888888999999999999887


Q ss_pred             CC-EEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146           93 GS-FVVIMDADLSHHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        93 ~d-~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      .+ .++++.+|...+.+ +.++++...+...++.+.
T Consensus       100 ~~~~~lil~dD~~~~~d-l~~ll~~h~~~~~~~~i~  134 (292)
T d1fxoa_         100 NDLSALVLGDNLYYGHD-FHELLGSASQRQTGASVF  134 (292)
T ss_dssp             TSEEEEEETTEEEECTT-HHHHHHHHHTCCSSEEEE
T ss_pred             CCceEEEEccccccCcC-HHHHHHHHHhCCCCcEEE
Confidence            54 56667666555554 788888887777765443

>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: CMP acylneuraminate synthetase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.49  E-value=0.16  Score=35.50  Aligned_cols=112  Identities=17%  Similarity=0.107  Sum_probs=68.6

Q ss_pred             CcEEEEEeCcccc--------------ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC
Q 026146            9 NKYSIIIPTYNER--------------LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR   74 (242)
Q Consensus         9 ~~isiiip~~n~~--------------~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~   74 (242)
                      |+|.+|||++...              ..+.-+++++++...  --+|||..|  ++...+.+..    ++ ..+.....
T Consensus         2 ~ki~aiIpaR~~S~Rlp~K~l~~i~gkpLi~~~i~~~~ks~~--id~Iivstd--~~~i~~~~~~----~~-~~~~~~~~   72 (228)
T d1qwja_           2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAGV--FQSVWVSTD--HDEIENVAKQ----FG-AQVHRRSS   72 (228)
T ss_dssp             CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHHTC--CSEEEEEES--CHHHHHHHHH----TT-CEEEECCG
T ss_pred             CCEEEEeccCCCCCCCCCcchhhhCCeeHHHHHHHHHHhcCC--cceEEEecc--hhhhhhhhhh----cC-cccccccc
Confidence            7899999998543              345577888876531  225666544  2233333333    32 22322221


Q ss_pred             ---CCCcchHHHHHHHHhhc-CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEE
Q 026146           75 ---PKKLGLGTAYIHGLKHA-SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTR  129 (242)
Q Consensus        75 ---~~~~g~~~a~n~g~~~a-~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~  129 (242)
                         ............+++.- ..++++++.+|.. ..++.++++++.+.+.+.+.+++..
T Consensus        73 ~~~~~~~~~~~~i~~~~~~~~~~~~iv~~~~~~P~~~~~~I~~~i~~~~~~~~d~~~~~~  132 (228)
T d1qwja_          73 ETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVV  132 (228)
T ss_dssp             GGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEE
T ss_pred             ccccccchhhhhhhhccccccccceeeeecccccccCchhhhhhhhhhhccCcccccccc
Confidence               11223344445555543 4799999999987 5788999999999888888777543

>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: glucose-1-phosphate thymidylyltransferase
domain: RffH
species: Escherichia coli [TaxId: 562]

Probab=95.36  E-value=0.038  Score=40.82  Aligned_cols=103  Identities=13%  Similarity=0.224  Sum_probs=67.0

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHH---HhCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQ---LYGEDRILLRPRPKKLGLGTAYIHGLKHA   91 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~---~~~~~~~~~~~~~~~~g~~~a~n~g~~~a   91 (242)
                      +|.+|. +.|...|+.|...   .--+|+||-+-   .....++++..   .+ +..+.++..+...|.++|...+-+..
T Consensus        27 lpi~~k-p~i~~~l~~l~~~---gi~~i~iv~~~---~~~~~~~~~~~~g~~~-gi~I~y~~Q~~plGta~Ai~~a~~fi   98 (291)
T d1mc3a_          27 LPIYDK-PMIYYPLSVLMLA---GIREILIITTP---EDKGYFQRLLGDGSEF-GIQLEYAEQPSPDGLAQAFIIGETFL   98 (291)
T ss_dssp             SEETTE-ETTHHHHHHHHHT---TCCEEEEEECT---TTHHHHHHHHTTSGGG-TCEEEEEECSSCCCSTHHHHHTHHHH
T ss_pred             cEECCE-ehHHHHHHHHHHc---CCCEEEEEeCc---ccHHHHHHHhCchHhh-CcEEEEEECCCCCchHHHHHHHHHHh
Confidence            455665 7788889888765   23377777553   23445555543   22 35788899888999999999999988


Q ss_pred             CCC-EEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146           92 SGS-FVVIMDADLSHHPKYLPSFIKKQLETGASIVT  126 (242)
Q Consensus        92 ~~d-~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~  126 (242)
                      ..+ .++++.+|.....++ ..++....+...++.+
T Consensus        99 ~~~~~~lvlgddi~~~~~~-~~~l~~~~~~~~~atI  133 (291)
T d1mc3a_          99 NGEPSCLVLGDNIFFGQGF-SPKLRHVAARTEGATV  133 (291)
T ss_dssp             TTSCEEEEETTEEEECSSC-HHHHHHHTTCCSSEEE
T ss_pred             CCCCeEEEECCCcccCcCH-HHHHHHHHhCcCCcEE
Confidence            754 566666666666654 5555554444444433

>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: glucose-1-phosphate thymidylyltransferase
domain: RmlA (RfbA)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.96  E-value=0.094  Score=38.66  Aligned_cols=107  Identities=11%  Similarity=0.155  Sum_probs=67.8

Q ss_pred             EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146           15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKKLGLGTAYIHGLKHAS   92 (242)
Q Consensus        15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~~g~~~a~n~g~~~a~   92 (242)
                      +|..+ ...|+.+++.+...-   .-+++||.+..   ..+.++++...  ..+.++.++..+...|.+.|...+.....
T Consensus        29 l~i~~-kpii~~~l~~l~~~g---~~~i~Iv~~~~---~~~~~~~~~~~~~~~~~~i~~v~e~~~~gta~Al~~a~~~l~  101 (295)
T d1lvwa_          29 LPIYD-KPMIYYPLSVLMLAG---IRDILIISTPR---DLPLYRDLLGDGSQFGVRFSYRVQEEPRGIADAFIVGKDFIG  101 (295)
T ss_dssp             SEETT-EETTHHHHHHHHHTT---CCEEEEEECTT---THHHHHHHHTTSGGGTSEEEEEECSSCCCGGGHHHHTHHHHT
T ss_pred             CeECC-EEHHHHHHHHHHHCC---CCeEEEEeCcc---cHHHHHHHhccchhcCCEEEEEECCCCCCHHHHHHHHHHHcC
Confidence            34444 478899999987652   23677765542   24445544322  12346777887878899999988888876


Q ss_pred             C-CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEE
Q 026146           93 G-SFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTR  129 (242)
Q Consensus        93 ~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~  129 (242)
                      . ++++++-+|...+ ..+..++....+.+.++.++..
T Consensus       102 ~~~~~li~~~d~~~~-~~~~~~~~~~~~~~~~~ti~~~  138 (295)
T d1lvwa_         102 DSKVALVLGDNVFYG-HRFSEILRRAASLEDGAVIFGY  138 (295)
T ss_dssp             TSCEEEEETTCCEEC-TTHHHHHHHHHTCCSSEEEEEE
T ss_pred             CCCEEEEeCCcceec-hhHHHHHHHHHhCCCCeEEEEE
Confidence            5 5666666664444 4566677766666666655543

>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Molybdenum cofactor biosynthesis protein MobA
domain: Molybdenum cofactor biosynthesis protein MobA
species: Escherichia coli [TaxId: 562]

Probab=92.03  E-value=0.44  Score=31.89  Aligned_cols=87  Identities=10%  Similarity=0.160  Sum_probs=56.0

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVI   98 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~   98 (242)
                      +....|+.+++.+.+..    .+++|+-+..    .+....    . ...+......+..|...+.-.++....++++++
T Consensus        28 ~g~~ll~~~l~~l~~~~----~~ivv~~~~~----~~~~~~----~-~~~v~~d~~~~~~~~~~g~~~~~~~~~~~~vlv   94 (188)
T d1e5ka_          28 NGKPLWQHVADALMTQL----SHVVVNANRH----QEIYQA----S-GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLF   94 (188)
T ss_dssp             TTEEHHHHHHHHHHHHC----SCEEEECSSS----HHHHHT----T-SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEE
T ss_pred             CCEehhHHHHhhhcccc----cccccccCcc----HHhhhh----c-CCCccccccccccchhHHHHHHHHhcccceEEE
Confidence            44566788888876652    2466664432    111111    1 223333334445667778888888899999999


Q ss_pred             EeCCCC-CCCCChHHHHHHHH
Q 026146           99 MDADLS-HHPKYLPSFIKKQL  118 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~  118 (242)
                      +-+|.. ++++.+..+++...
T Consensus        95 ~~~D~P~i~~~~i~~L~~~~~  115 (188)
T d1e5ka_          95 CPCDTPYIPPDLAARLNHQRK  115 (188)
T ss_dssp             EETTCTTCCTTHHHHHHHTCT
T ss_pred             eccCCCCCCHHHHHHHHHhcc
Confidence            999987 68888888877643

>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP)
species: Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]

Probab=91.89  E-value=0.51  Score=32.88  Aligned_cols=107  Identities=15%  Similarity=0.141  Sum_probs=62.6

Q ss_pred             CcEEEEEeCcc-----------------ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEE
Q 026146            9 NKYSIIIPTYN-----------------ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILL   71 (242)
Q Consensus         9 ~~isiiip~~n-----------------~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~   71 (242)
                      ..+++||++-.                 ..+.+..+++.+.+..  ..-+|+|+.+..   -.++++++...+. ..+.+
T Consensus         3 k~i~~IIlAaG~GtRm~~~~pK~l~~l~Gkpli~~~l~~~~~~~--~~~~Iivv~~~~---~~~~~~~~~~~~~-~~~~~   76 (226)
T d1w77a1           3 KSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMP--EVKEIVVVCDPF---FRDIFEEYEESID-VDLRF   76 (226)
T ss_dssp             TCEEEEEECCC-------CCCTTTSEETTEEHHHHHHHHHHTCT--TEEEEEEECCGG---GTHHHHTTTTSCS-SEEEE
T ss_pred             CceEEEEeCCccCccCcCCCCceeeEECCeeHHHHHHHHHHhhc--cccceeeccchh---hhhhhhccccccc-ccccc
Confidence            35788888743                 2344566677665441  234566665422   2355555544332 34554


Q ss_pred             eeCCCCcchHHHHHHHHhhc--CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCc
Q 026146           72 RPRPKKLGLGTAYIHGLKHA--SGSFVVIMDADLS-HHPKYLPSFIKKQLETGAS  123 (242)
Q Consensus        72 ~~~~~~~g~~~a~n~g~~~a--~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~  123 (242)
                      +....  ....+.-.|++..  ..++|++.|+|.. ++++.+..++....+.+..
T Consensus        77 ~~gg~--~r~~sv~~~l~~~~~~~~~Vli~d~~~P~i~~~~i~~l~~~~~~~~~~  129 (226)
T d1w77a1          77 AIPGK--ERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAA  129 (226)
T ss_dssp             ECCCS--SHHHHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHSEE
T ss_pred             ccccc--hhhhhhhhhHhhhccccccceecccccccccHHHhhhhhhhhhccCce
Confidence            43211  2344555566654  4699999999877 6788888888887765443

>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: IspD/IspF bifunctional enzyme, CDP-me synthase domain
species: Campylobacter jejuni [TaxId: 197]

Probab=91.47  E-value=0.31  Score=33.67  Aligned_cols=88  Identities=9%  Similarity=0.019  Sum_probs=57.7

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVI   98 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~   98 (242)
                      +....+..+++++.+..  ..-+|+|+.+.     .+.++.+     ...+.++...  .....+...|++..+.++|++
T Consensus        27 ~gkpii~~~l~~~~~~~--~~~~Ivvv~~~-----~~~~~~~-----~~~~~~v~Gg--~~r~~Sv~~gl~~~~~~~VlI   92 (205)
T d1w55a1          27 GNDPLWLYATKNLSSFY--PFKKIVVTSSN-----ITYMKKF-----TKNYEFIEGG--DTRAESLKKALELIDSEFVMV   92 (205)
T ss_dssp             BTEEHHHHHHHHHHTTS--CCSCEEEEESC-----HHHHHTT-----CSSSEEEECC--SSHHHHHHHHHTTCCSSEEEE
T ss_pred             CCEEHHHHHHHHHHhhc--ccccccccccc-----ccccccc-----cccccccccc--cchhhhhhhhhhhhhhcceee
Confidence            44566777888876542  22356666442     2333332     2345565422  235677788999999999999


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhc
Q 026146           99 MDADLS-HHPKYLPSFIKKQLET  120 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~  120 (242)
                      .|+|-. ++++.++++++.+.+.
T Consensus        93 hd~~rP~i~~~~i~~li~~~~~~  115 (205)
T d1w55a1          93 SDVARVLVSKNLFDRLIENLDKA  115 (205)
T ss_dssp             EETTCTTCCHHHHHHHHTTGGGC
T ss_pred             eccCcccCcHHHHHHHHhhhhcc
Confidence            999976 7888899999877553

>d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase
species: Escherichia coli, KpsU [TaxId: 562]

Probab=91.26  E-value=1.6  Score=30.38  Aligned_cols=191  Identities=13%  Similarity=0.097  Sum_probs=95.9

Q ss_pred             cEEEEEeCccc--------------cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC
Q 026146           10 KYSIIIPTYNE--------------RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP   75 (242)
Q Consensus        10 ~isiiip~~n~--------------~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~   75 (242)
                      ++-+|||++..              .+.+..+++++.+..  ..-+|+|+.|.     .+ +......+. ..+.. ..+
T Consensus         2 k~i~iIpAR~~SkRl~~Knl~~i~GkPli~~~i~~a~~~~--~~d~Iiv~td~-----~~-i~~~~~~~~-~~~~~-~~~   71 (245)
T d1h7ea_           2 KAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVA--GVAEVWVATDD-----PR-VEQAVQAFG-GKAIM-TRN   71 (245)
T ss_dssp             CEEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHTCT--TCCEEEEEESC-----HH-HHHHHHHTT-CEEEE-CCS
T ss_pred             CEEEEEcCCCCCcCCCCccccccCCccHHHHHHHHHHhCC--CCCeEEEeccc-----cc-chhhhhhcC-ceEEE-ecC
Confidence            45677888542              245566777665542  22256665442     12 222333332 23333 334


Q ss_pred             CCcchHHHHHHHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcE-EEEEEEeecCCccCchhhHHHHH-----h
Q 026146           76 KKLGLGTAYIHGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLETGASI-VTGTRYVRSGGVHGWNLMRKLTS-----R  148 (242)
Q Consensus        76 ~~~g~~~a~n~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~-----~  148 (242)
                      ...+.......+++....|+++.+++|.. .++..+..+++.+....... +......................     .
T Consensus        72 ~~~~~~~~~~~~~~~~~~d~vv~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~~~~~~~  151 (245)
T d1h7ea_          72 DHESGTDRLVEVMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVKVVVNTRQDAL  151 (245)
T ss_dssp             CCSSHHHHHHHHHHHSCCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSCEEEECTTCBEE
T ss_pred             ccccccHHHHHHHHhcCCCEEEEecchhhhcccccchhhhhcccccccccccccccccccccccCCcceeeccchhhhhh
Confidence            44556677778888888999999999988 56778888888776543332 22211111000000000000000     0


Q ss_pred             HHHH---HHHHHhCCCccccccchhhcchHHHHHhhhcccCC-CcccchHHHHHHHHcCCceEEeee
Q 026146          149 GANV---LAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK-GYVFQMEMIVRACRKGYHIEEVPI  211 (242)
Q Consensus       149 ~~~~---~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~-~~~~d~~~~~~~~~~g~~i~~~p~  211 (242)
                      ....   ..............++..+++++.+.+...+.... ...+..|. +|+...|+++..++.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~s~~e~~e~ie~-lr~l~ng~~I~~~~~  217 (245)
T d1h7ea_         152 YFSRSPIPYPRNAEKARYLKHVGIYAYRRDVLQNYSQLPESMPEQAESLEQ-LRLMNAGINIRTFEV  217 (245)
T ss_dssp             EEESSCSSCCTTGGGCCEEEEEEEEEEEHHHHHHGGGSCCCHHHHHHTCTT-HHHHHTTCCEEEEEC
T ss_pred             hhhhhhhhhhhcccccccceeeeeEEeeeccccccccccCChhhhhhhHHH-HHHHHCCCeEEEEEe
Confidence            0000   00000111122334566789999998874332211 11233444 478889999987764

>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP)
species: Neisseria gonorrhoeae [TaxId: 485]

Probab=89.97  E-value=1.9  Score=29.72  Aligned_cols=99  Identities=11%  Similarity=0.111  Sum_probs=54.3

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHh----h---cC
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLK----H---AS   92 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~----~---a~   92 (242)
                      ..+.+..+++.+.+..  ..-+++||-+ ..+...+.+.   ..++  .+..+..... ....+.-.|+.    .   ..
T Consensus        30 gkpli~~~i~~~~~~~--~~~~iivv~~-~~~~~~~~~~---~~~~--~~~~~~~g~~-~~~~s~~~~l~~~~~~~~~~~  100 (226)
T d1vgwa_          30 SKTVLEHVLGIFERHE--AVDLTVVVVS-PEDTFADKVQ---TAFP--QVRVWKNGGQ-TRAETVRNGVAKLLETGLAAE  100 (226)
T ss_dssp             TEEHHHHHHHHHHTCT--TCCEEEEECC-TTCSTHHHHH---HHCT--TSEEECCCCS-SHHHHHHHHHHHHHHHSSSCT
T ss_pred             CEEHHHHHHHHHHhCC--Cccccceecc-hhhhhhhhhc---cccc--ceeecccccc-ccchhhhHHHHHHHHhccccc
Confidence            4466777888776542  1225555544 3333333332   2233  3333332211 22223333332    2   25


Q ss_pred             CCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           93 GSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        93 ~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      .+++++.|+|.. +++..+.+++..+.+...+.+.+
T Consensus       101 ~~~v~~~~~~~P~i~~~~i~~~i~~~~~~~~~~i~~  136 (226)
T d1vgwa_         101 TDNILVHDAARCCLPSEALARLIEQAGNAAEGGILA  136 (226)
T ss_dssp             TSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCEEEE
T ss_pred             ccceeecccccccCcHHHHHHHHhhhcccccceeec
Confidence            789999999965 67888999998887766666554

>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=88.76  E-value=1.4  Score=30.51  Aligned_cols=99  Identities=13%  Similarity=0.061  Sum_probs=61.3

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC---CCE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS---GSF   95 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~---~d~   95 (242)
                      +....|..+++.+.+.   ..-+++||-...   . +....+    ......+.......|...+...+.....   .+.
T Consensus        27 ~Gkpli~~~l~~l~~~---~~~~iivv~~~~---~-~~~~~~----~~~~~~~~~~~~~~g~~~~~~~a~~~l~~~~~~~   95 (250)
T d1g97a2          27 AGISMLEHVFRSVGAI---QPEKTVTVVGHK---A-ELVEEV----LAGQTEFVTQSEQLGTGHAVMMTEPILEGLSGHT   95 (250)
T ss_dssp             TTEEHHHHHHHHHGGG---CCSEEEEEECTT---H-HHHHHH----TTTTSEEEECSSCCCHHHHHHTTHHHHTTCCSEE
T ss_pred             CCeeHHHHHHHHHHHc---CCCeEEEecccc---c-chhhhh----ccccccccccccccccchHHHHHHHhhhcccCcc
Confidence            4556788888888765   233666665431   1 222222    1234555555666788877777666554   344


Q ss_pred             EEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEE
Q 026146           96 VVIMDADLSHHPKYLPSFIKKQLETGASIVTGT  128 (242)
Q Consensus        96 i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~  128 (242)
                      +++.++|..+.+..++++++...+....++...
T Consensus        96 ~~i~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~  128 (250)
T d1g97a2          96 LVIAGDTPLITGESLKNLIDFHINHKNVATILT  128 (250)
T ss_dssp             EEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             eEEecCCCccCHHHHHHHHHHHhhhcccccccc
Confidence            555556667899999999988877666666543

>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP)
species: Escherichia coli [TaxId: 562]

Probab=88.71  E-value=1.4  Score=30.25  Aligned_cols=97  Identities=12%  Similarity=0.085  Sum_probs=54.2

Q ss_pred             ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-CCCEEEEEe
Q 026146           22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-SGSFVVIMD  100 (242)
Q Consensus        22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-~~d~i~~lD  100 (242)
                      +.|..+++.+.+..  ..-+|+||.+.....-.   +......  ..+.+.....  +...+.-.|+... ..++|++.|
T Consensus        32 plI~~~i~~~~~~~--~i~~Iivv~~~~~~~~~---~~~~~~~--~~v~~~~~~~--~~~~sv~~~~~~~~~~~~vl~~~  102 (225)
T d1i52a_          32 TILEHSVHALLAHP--RVKRVVIAISPGDSRFA---QLPLANH--PQITVVDGGD--ERADSVLAGLKAAGDAQWVLVHD  102 (225)
T ss_dssp             EHHHHHHHHHHTST--TEEEEEEEECTTCCSGG---GSGGGGC--TTEEEEECCS--SHHHHHHHHHHTSTTCSEEEECC
T ss_pred             EHHHHHHHHHHhCc--cccccccccchhhhhhh---hhhhccc--cccccccCCc--chhHHHHhhhcccCccceeeeec
Confidence            44566677665431  12356666543322221   1112222  3565555443  3444555566665 589999999


Q ss_pred             CCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146          101 ADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus       101 ~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      .|.. ++++.+..++..+..+....+..
T Consensus       103 ~~~p~i~~~~~~~~~~~~~~~~~~~v~~  130 (225)
T d1i52a_         103 AARPCLHQDDLARLLALSETSRTGGILA  130 (225)
T ss_dssp             TTCTTCCHHHHHHHHGGGGTCSSCEEEE
T ss_pred             cCCCCCCHHHHHHHHhhhhhcccccccc
Confidence            9966 66777888887776655555443

>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: TTHA0179-like
domain: Uncharacterized protein TTHA0179
species: Thermus thermophilus [TaxId: 274]

Probab=88.54  E-value=0.65  Score=32.32  Aligned_cols=87  Identities=16%  Similarity=0.155  Sum_probs=56.5

Q ss_pred             cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEE
Q 026146           19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVI   98 (242)
Q Consensus        19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~   98 (242)
                      +....|..+++.+.+.   ..-++||+.+.....               .+... .....|...+...|++... +++++
T Consensus        30 ~Gkpli~~~~~~l~~~---~~~~vvv~~~~~~~~---------------~~~~~-~~~~~~~~~~v~~al~~~~-~~~lv   89 (231)
T d2dpwa1          30 RGRPMVEWVLEALYAA---GLSPVYVGENPGLVP---------------APALT-LPDRGGLLENLEQALEHVE-GRVLV   89 (231)
T ss_dssp             TTEETHHHHHHHHHHT---TCEEEEESCCSSCSS---------------CCSEE-ECCCSSHHHHHHHHHHTCC-SEEEE
T ss_pred             CCeeHHHHHHHHHHhc---CCCeEEeeeeccccc---------------eeeee-cccchHHHHHHHHHHHhhc-CceEE
Confidence            3456788888888654   233555554432211               11222 2345688888999998886 57888


Q ss_pred             EeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           99 MDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      +.+|.. ++++.++.+++.+.+  .+++++
T Consensus        90 ~~~D~P~i~~~~i~~l~~~~~~--~~~~~~  117 (231)
T d2dpwa1          90 ATGDIPHLTEEAVRFVLDKAPE--AALVYP  117 (231)
T ss_dssp             EETTCTTCCHHHHHHHHHHCCS--CSEEEE
T ss_pred             eeCCCccCCHHHHHHHHHHhhh--cCceEE
Confidence            999985 789999999987643  444444

>d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: CMP acylneuraminate synthetase
species: Neisseria meningitidis [TaxId: 487]

Probab=83.21  E-value=3  Score=28.30  Aligned_cols=99  Identities=12%  Similarity=0.072  Sum_probs=58.9

Q ss_pred             cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC----CCCcchHHHHHHHHhh--cCCC
Q 026146           21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR----PKKLGLGTAYIHGLKH--ASGS   94 (242)
Q Consensus        21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~----~~~~g~~~a~n~g~~~--a~~d   94 (242)
                      ...+..+++.+++...  --+|||..|.      +.+.+.+..++ ..+ +.+.    ....+.......+++.  ...|
T Consensus        29 kpLi~~~i~~~~~s~~--~~~Iiv~td~------~~i~~i~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   98 (225)
T d1eyra_          29 ISLLGHTINAAISSKC--FDRIIVSTDG------GLIAEEAKNFG-VEV-VLRPAELASDTASSISGVIHALETIGSNSG   98 (225)
T ss_dssp             EEHHHHHHHHHHHHTC--CSEEEEEESC------HHHHHHHHHTT-CEE-EECCHHHHSTTCCHHHHHHHHHHHHTCCSE
T ss_pred             eEHHHHHHHHHHHcCC--CceEEEeecc------chhhhhhhhhc-cee-eeeccccccccccchhhccccccccccccc
Confidence            3455678888877632  2267776652      12333444443 223 2221    1122233344445544  3469


Q ss_pred             EEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEE
Q 026146           95 FVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTR  129 (242)
Q Consensus        95 ~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~  129 (242)
                      +|+.+.+|+. .++..+.+++..+.+...+.+++..
T Consensus        99 ~ii~~~~~~P~~~~~~I~~~i~~~~~~~~d~~~~~~  134 (225)
T d1eyra_          99 TVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSAC  134 (225)
T ss_dssp             EEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEE
T ss_pred             eEEEeeccccccccccccccceeeccccccccceee
Confidence            9999999998 6788899999988877777655443

>d1vica_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase
species: Haemophilus influenzae [TaxId: 727]

Probab=82.05  E-value=6  Score=27.29  Aligned_cols=106  Identities=11%  Similarity=0.232  Sum_probs=61.4

Q ss_pred             EEEEEeCccc--------------cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC
Q 026146           11 YSIIIPTYNE--------------RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK   76 (242)
Q Consensus        11 isiiip~~n~--------------~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~   76 (242)
                      +.+|||++..              .+.+..+++.+.+. . .+ +|||+-|.     .+ +.+.+..++ ..+.+.+...
T Consensus         2 ~~~iIpAR~gSkRlp~Knl~~i~GkpLI~~~i~~a~~s-~-i~-~IiVsTd~-----~~-i~~~~~~~~-~~~~~~~~~~   71 (255)
T d1vica_           2 FTVIIPARFASSRLPGKPLADIKGKPMIQHVFEKALQS-G-AS-RVIIATDN-----EN-VADVAKSFG-AEVCMTSVNH   71 (255)
T ss_dssp             CEEEEECCCCCSSSTTGGGCEETTEEHHHHHHHHHHHT-T-CS-EEEEEESC-----HH-HHHHHHHTT-CEEEECCCSS
T ss_pred             EEEEEecCCCCCCCCCchhhhhCCcCHHHHHHHHHHHC-C-CC-eEEEEcCC-----cc-cchhhhhhc-cccceeeecc
Confidence            4677888643              24566777777654 2 23 67777552     22 223333332 3555555444


Q ss_pred             CcchHHHHHHHHhhc---CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146           77 KLGLGTAYIHGLKHA---SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTG  127 (242)
Q Consensus        77 ~~g~~~a~n~g~~~a---~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~  127 (242)
                      ..|.+ ....+++..   ..++++.+.+|.. .++..+..++.............
T Consensus        72 ~~~~~-~~~~~~~~~~~~~~~~iv~~~~d~p~~~~~~i~~~i~~~~~~~~~~~~~  125 (255)
T d1vica_          72 NSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASL  125 (255)
T ss_dssp             CCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred             CCcch-hhHHHHHHhhccCCceEEEEecchhhhhhhhhhhhhhhcccccccccce
Confidence            33433 333333333   4689999999988 56677888888877655555443

>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.47  E-value=0.68  Score=32.30  Aligned_cols=86  Identities=12%  Similarity=0.123  Sum_probs=50.6

Q ss_pred             ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-CCEEEE
Q 026146           20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-GSFVVI   98 (242)
Q Consensus        20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~i~~   98 (242)
                      ....|+..|+++.+..   ..+|+|+-+--    .+......   ......+.......|.+.+...+..... ...+++
T Consensus        29 gkpiie~~i~~l~~~~---~~~iiiv~~~~----~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~i   98 (248)
T d2oi6a2          29 GKAMVQHVIDAANELG---AAHVHLVYGHG----GDLLKQAL---KDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILM   98 (248)
T ss_dssp             TEEHHHHHHHHHHHHT---CSCEEEEESSC----HHHHHHHC---CCTTEEEEECSSCCCHHHHHHHHGGGSCTTSEEEE
T ss_pred             ChhHHHHHHHHHHHcC---CcEEEeccCcc----cceeeeec---ccccccccccccCcccHHHHHhhhhhhccccceee
Confidence            3467888898887762   33566654432    12222221   2234555666667788889888888763 566666


Q ss_pred             EeCCCC-CCCCChHHHHH
Q 026146           99 MDADLS-HHPKYLPSFIK  115 (242)
Q Consensus        99 lD~D~~-~~~~~l~~l~~  115 (242)
                      +++|.. .++..+..+..
T Consensus        99 ~~~d~~~~~~~~~~~~~~  116 (248)
T d2oi6a2          99 LYGDVPLISVETLQRLRD  116 (248)
T ss_dssp             EETTCTTCCHHHHHHHHH
T ss_pred             ecCccccccchhHHHHHH
Confidence            666666 44444444443