Citrus Sinensis ID: 026451

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MANVGRTRRDGEKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQILHRNDDIPENVVEESNDHQMREGDDDRACQTNNKEKKSNKSEKDSCVDSFGEDFLRKWGNEPSHPFERGMKILRRNKGIIITAVLAFSLGVLLSRKFGSADHIDSD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEcccEEEEEEEccccccccEEEEEEEccEEEEEEEEEccccEEEEEEEEEEEccccccccccEEEEEccEEEEEEccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccHHHcccccccccccccccHHHHcccccccccccccccEEEEcccEEEEEEEEHEEccEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHHccccccccEccccccEEEEEcccccccEEEEEEccccEEEEEEEcccccccccEEEEEEEEcccccccccEEEEEcccEEEEEEccccccccccccccccccccccccccccccccccccccccccHHHHcccccccHHHccccccccccccccccccccccHHHccccccccHHHHHHccHHHHHHcHEEEEEEEEHHHEEEEcccccHHHcccc
Coil and Loop (DISEMBL)
manvgrtrrdgektltnnpivkefvpssgwtedsnghyllvdlpdfkkEQVKLQVDssgnitvsgemltsdnRYIMRFeqmfplppnsdmdkisgkfdgellyvtvpkrakeesteqpslpasasgeneqqilhrnddipenvveesndhqmregdddracqtnnkekksnksekdscvdSFGEDFlrkwgnepshpferGMKILRRNKGIIITAVLAFSLGVLLsrkfgsadhidsd
Flexible Loop (DISEMBL)
manvgrtrrdgektltnnpivkefvpssgwtedSNGHYLLVDLPDFKKEQVKLQvdssgnitvsgemltSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRakeesteqpslpasasgeneqqilhrnddipeNVVEEsndhqmregdddracqtnnkekksnksekdscvDSFGEDflrkwgnepshpfeRGMKILRRNKGIIITAVLAFSLGVllsrkfgsadhidsd
Low Complexity Region (SEG)
MANVGRTRRDGEKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQILHRNDDIPENVVEESNDHQMREGDDDRACQTnnkekksnksekDSCVDSFGEDFLRKWGNEPSHPFERGMKILRRNKGIIITAVLAFSLGVLLSRKFGSADHIDSD
Disordered region (IsUnstruct)
********************VKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVD**GNITVSGEMLTSDNRYIMRFEQMF*************KFDGELLYVTV*****************************************************************************EDFLRKWG*****PFERGMKILRRNKGIIITAVLAFSLGVLLSRKF*********
Disordered Region (DISOPRED)
*********************KEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITV**************FEQMFPLPPNSDMDKISGKFDGELLYVT********************************************************************************************************GIIITAVLAFSLGVLLSRKF*********
Disordered Region (DISEMBL)
**********GEKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR********************QQILHRNDDIPENVV***********************************DSFGEDFLRKWGNEPSHPFERGMKILRRNKGIIITAVLAFSLGVLLSRKFG********
Disordered Region (DISPRO)
*******************IVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRA************************************************************************************SHPFERGMKILRRNKGIIITAVLAFSLGVLLSRKFG********
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MANVGRTRRDGEKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQILHRNDDIPENVVEESNDHQMREGDDDRACQTNNKEKKSNKSEKDSCVDSFGEDFLRKWGNEPSHPFERGMKILRRNKGIIITAVLAFSLGVLLSRKFGSADHIDSD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	238	2.2.26 [Sep-21-2011]
Q943Q3	150	16.6 kDa heat shock prote	no	no	0.373	0.593	0.311	8e-08
Q38806	195	22.0 kDa heat shock prote	no	no	0.352	0.430	0.297	7e-07
Q9LNW0	157	17.8 kDa class I heat sho	no	no	0.331	0.503	0.314	4e-06
P19244	197	22.7 kDa class IV heat sh	N/A	no	0.331	0.401	0.303	1e-05
P30236	192	22.0 kDa class IV heat sh	no	no	0.420	0.520	0.285	1e-05
P27879	143	18.1 kDa class I heat sho	N/A	no	0.331	0.552	0.314	1e-05
O49710	134	15.4 kDa class V heat sho	no	no	0.378	0.671	0.293	1e-05
P13853	157	17.6 kDa class I heat sho	no	no	0.331	0.503	0.314	2e-05
P27880	158	18.2 kDa class I heat sho	N/A	no	0.331	0.5	0.314	2e-05
P04795	154	17.6 kDa class I heat sho	no	no	0.373	0.577	0.282	2e-05

>sp|Q943Q3|HS166_ORYSJ 16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 17/106 (16%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDN-------------RYIM 76
           W E    H    DLP  +K+Q K++V+  G + +SGE    ++             R   
Sbjct: 44  WKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSG 103

Query: 77  RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPA 122
           +F++ F LP  + +D++S   D  +L VTVPK    E T++P L A
Sbjct: 104 KFQRRFRLPRGARVDQVSASMDNGVLTVTVPK----EETKKPQLKA 145

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q38806|HSP22_ARATH 22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1

 Score = 54.3 bits (129), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 10/94 (10%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----------NRYIMRFE 79
           W E + GH +++D+P  KK++VK++V+ +G + VSGE    +           R   +F 
Sbjct: 75  WKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFW 134

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEE 113
           + F LP N DM+ +  K +  +L + + K + E+
Sbjct: 135 RQFKLPDNVDMESVKAKLENGVLTINLTKLSPEK 168

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LNW0|HS178_ARATH 17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1

 Score = 52.0 bits (123), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----------NRYIMRFE 79
           W E +  H    DLP  KKE+VK++++    + +SGE                R   +F 
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPK 108
           + F LP N  MD++    +  +L VTVPK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140

Arabidopsis thaliana (taxid: 3702)

>sp|P19244|HSP41_PEA 22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 10/89 (11%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDN----------RYIMRFE 79
           W E   GH ++VD+P  KK+ +K++V+ +  + VSGE    ++          R   +F 
Sbjct: 79  WKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFW 138

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPK 108
           + F LP N D+D +  K +  +L +T+ K
Sbjct: 139 RQFKLPQNVDLDSVKAKMENGVLTLTLHK 167

Pisum sativum (taxid: 3888)

>sp|P30236|HSP41_SOYBN 22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1

 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 12/112 (10%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----------NRYIMRFE 79
           W E   GH +++D+P  K+E++K++V+ +  + VSGE    +           R   +F 
Sbjct: 71  WKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFW 130

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQ 131
           + F LP N D+D +  K +  +L +T+ K +  +  + P +  S +GE+ QQ
Sbjct: 131 RQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGK-IKGPRV-VSIAGEDHQQ 180

Glycine max (taxid: 3847)

>sp|P27879|HSP11_MEDSA 18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGE----------MLTSDNRYIMRFE 79
           W E    H    DLP  KKE+VK++++    + +SGE                R   +F 
Sbjct: 40  WKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFM 99

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPK 108
           + F LP N+ MD++    +  +L VTVPK
Sbjct: 100 RRFRLPENAKMDQVKAAMENGVLTVTVPK 128

Medicago sativa (taxid: 3879)

>sp|O49710|HS154_ARATH 15.4 kDa class V heat shock protein OS=Arabidopsis thaliana GN=HSP15.4 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEM--LTSDNRYIMRFEQMFPLPPN 87
           W++  + H   VDLP  +KE++K++++ S  + +  E   ++  ++ +  F++ F LP +
Sbjct: 30  WSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFRLPES 89

Query: 88  SDMDKISGKFDGELLYVTVPKRAKEESTEQPS 119
            DM  IS  ++  +L V VPKR        PS
Sbjct: 90  IDMIGISAGYEDGVLTVIVPKRIMTRRLIDPS 121

Arabidopsis thaliana (taxid: 3702)

>sp|P13853|HS17C_ARATH 17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 10/89 (11%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----------NRYIMRFE 79
           W E    H    DLP  +KE+VK++V+    + +SGE    +           R   +F 
Sbjct: 54  WRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFT 113

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPK 108
           + F LP N+ M++I    +  +L VTVPK
Sbjct: 114 RRFRLPENAKMEEIKASMENGVLSVTVPK 142

Arabidopsis thaliana (taxid: 3702)

>sp|P27880|HSP12_MEDSA 18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----------NRYIMRFE 79
           W E    H    DLP  KKE+VK++++    + +SGE                R   +F 
Sbjct: 55  WKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFM 114

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPK 108
           + F LP N+ MD++    +  +L VTVPK
Sbjct: 115 RRFRLPENAKMDQVKAAMENGVLTVTVPK 143

Medicago sativa (taxid: 3879)

>sp|P04795|HSP15_SOYBN 17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGE----------MLTSDNRYIMRFE 79
           W E    H L  D+P  KKE+VK+Q++    + +SGE               +R   +F 
Sbjct: 51  WKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFM 110

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQP 118
           + F LP N+ ++++    +  +L VT+PK   ++S  +P
Sbjct: 111 RRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKP 149

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
356565075	233	PREDICTED: uncharacterized protein LOC10	0.945	0.965	0.433	3e-43
255540919	221	conserved hypothetical protein [Ricinus	0.878	0.945	0.447	2e-42
224124146	204	predicted protein [Populus trichocarpa]	0.810	0.946	0.430	4e-41
351721781	236	uncharacterized protein LOC100527247 [Gl	0.869	0.877	0.398	5e-38
224119120	197	predicted protein [Populus trichocarpa]	0.785	0.949	0.432	2e-37
357477445	260	16.6 kDa heat shock protein [Medicago tr	0.945	0.865	0.403	1e-36
217073606	260	unknown [Medicago truncatula]	0.945	0.865	0.403	1e-36
356519035	201	PREDICTED: uncharacterized protein LOC10	0.781	0.925	0.363	2e-28
255549593	262	small heat-shock protein, putative [Rici	0.600	0.545	0.333	2e-14
15209175	247	Hsp20/alpha crystallin family protein [S	0.882	0.850	0.261	5e-13

>gi|356565075|ref|XP_003550770.1| PREDICTED: uncharacterized protein LOC100803762 [Glycine max]

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 145/233 (62%), Gaps = 8/233 (3%)

Query: 1   MANVGRTRRDGEKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGN 60
           MA+   T R GE+T    P+V+E VP+SGWT DS GHYL+VDLPDF+KE+VKLQVDS G 
Sbjct: 1   MASARGTTRVGERTRARTPVVEEMVPNSGWTLDSAGHYLIVDLPDFRKEEVKLQVDSYGR 60

Query: 61  ITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSL 120
           I VSGE   ++ + +  F   FP P NSDMDKI+GKFDG +LYV VPK+   ++ E  + 
Sbjct: 61  IVVSGERHLNEWKRV-HFRLTFPAPLNSDMDKIAGKFDGGILYVYVPKQVTHQNKESAT- 118

Query: 121 PASASGE---NEQQILHRNDDIPENVVEESNDHQMREGDDDRA-CQTNNKEKKSNKSEKD 176
               +GE    E++  H++++      EE++ H  +  +  R   Q ++  + + K  ++
Sbjct: 119 AKHGNGEVERAEEKDCHQHENGEVERAEENDSHAPKADEGRRGPSQHDDHIELAVKRNEN 178

Query: 177 SCVDSFGEDFLRKWGNEPSHPFERGMKILRRNKGIIITAVLAFSLGVLLSRKF 229
             +  F E  +R W  E +      + +LR NKGI+ITAV+AFSLG+L+SRKF
Sbjct: 179 EHIGEFPEQVIRNWHQESA--LRSALGVLRENKGIVITAVIAFSLGLLVSRKF 229

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540919|ref|XP_002511524.1| conserved hypothetical protein [Ricinus communis] gi|223550639|gb|EEF52126.1| conserved hypothetical protein [Ricinus communis]

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/239 (44%), Positives = 153/239 (64%), Gaps = 30/239 (12%)

Query: 1   MANV-GRTRRDGEKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSG 59
           M NV G+    GE++ + + +V+EFVPS+ WTEDS+ H+LLVDLPDF+KE+VKLQVD SG
Sbjct: 1   MENVKGKRGGVGERSRSRDHVVEEFVPSAVWTEDSDCHFLLVDLPDFEKEEVKLQVDQSG 60

Query: 60  NITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPS 119
            ITVSGE L + N+YI  FE+ F  P NSD++K + KFDG +LYVT+PK+ + E  E   
Sbjct: 61  QITVSGERLVNSNKYIY-FEKAFKSPENSDINKTTQKFDGGILYVTLPKKPQVEKKEP-- 117

Query: 120 LPASASGENEQQILHRNDDIPENVVEESNDHQMRE----GDDDRACQTN---NKEKKSNK 172
                           ND+  E V ++ +D Q +E    GD +R+ ++N    + +K  K
Sbjct: 118 ----------------NDE--EGVAKDYDDMQEKEEKTCGDHERSGESNIDGEQIQKKEK 159

Query: 173 SEKDSCVDSFGEDFLRKWGNEPSHPFERGMKILRRNKGIIITAVLAFSLGVLLSRKFGS 231
           S+K S +D F ++ + KW  E S   E+  KIL +NK +++TA +AFSLG+L+SRK GS
Sbjct: 160 SKKGSRIDGFDKEIVEKWEGECS-LLEKATKILCKNKEVLLTAAIAFSLGMLVSRKLGS 217

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124146|ref|XP_002330116.1| predicted protein [Populus trichocarpa] gi|222871250|gb|EEF08381.1| predicted protein [Populus trichocarpa]

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/230 (43%), Positives = 139/230 (60%), Gaps = 37/230 (16%)

Query: 1   MANVGRTRRDG--EKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSS 58
           MA  G  R  G  ++T + + +V+E VPSS WTEDSNGHYLLVDLPDFKKE+VKLQVD+S
Sbjct: 1   MAKNGGMRSGGIADRTRSRSHVVEECVPSSAWTEDSNGHYLLVDLPDFKKEEVKLQVDNS 60

Query: 59  GNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQP 118
           G I VSGE L ++N  ++ FEQ F LP NSD DKI+GKFDGE+LYVTVPK  +EE++ +P
Sbjct: 61  GQIVVSGERLVNNNSKVIYFEQKFKLPENSDTDKITGKFDGEILYVTVPK--QEETSVEP 118

Query: 119 SLPASASGENEQQILHRNDDIPENVVEESNDHQMREGDDDRACQTNNKEKKSNKSEKDSC 178
                          ++N          + D   R                  + E+   
Sbjct: 119 E--------------YQNTATATATATATGDENHR------------------RLEEKGS 146

Query: 179 VDSFGEDFLRKWGNE-PSHPFERGMKILRRNKGIIITAVLAFSLGVLLSR 227
           +DS+     + W  E  + P E+ M+++++NKGI++TAV+AFSLG++++R
Sbjct: 147 MDSYRLFSRKYWRQEDEATPLEKAMEMIKKNKGILLTAVIAFSLGIIVTR 196

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721781|ref|NP_001236965.1| uncharacterized protein LOC100527247 [Glycine max] gi|255631868|gb|ACU16301.1| unknown [Glycine max]

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 134/241 (55%), Gaps = 34/241 (14%)

Query: 1   MANVGRTRRDGEKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGN 60
           MA+   T R G +T    P+V+E VP+SGWTEDS GHYLLVDLPDF+KE++KLQV+S G 
Sbjct: 1   MASARGTTRVGVRTRARTPVVEEIVPNSGWTEDSAGHYLLVDLPDFRKEEMKLQVNSYGR 60

Query: 61  ITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSL 120
           I VSGE   ++ +++  F   FP P NSDMDKI+GKFDG +LYVTVPK+  +++ E  + 
Sbjct: 61  IVVSGERNLNEWKHV-HFRLTFPAPLNSDMDKIAGKFDGGILYVTVPKQVTQQNKESETA 119

Query: 121 PASASGENEQQILHRNDDIPENVVEESNDHQMREGDDDRAC-----------------QT 163
               +G+ E+              EE + HQ   G+ +RA                  Q 
Sbjct: 120 KV-GNGKVER-------------AEEKDSHQHGNGEVERAAENDSHAPNADEGRIGPNQH 165

Query: 164 NNKEKKSNKSEKDSCVDSFGEDFLRKWGNEPSHPFERGMKILRRNKGIIITAVLAFSLGV 223
           +N  +   K  ++  +  F E  +R W  E        +     NKGI++TAV+AFSLGV
Sbjct: 166 DNHIEHEVKRHENEHIGEFPEQVIRNWHQESM--LRSAVGGFEENKGIVVTAVIAFSLGV 223

Query: 224 L 224
           +
Sbjct: 224 V 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119120|ref|XP_002317990.1| predicted protein [Populus trichocarpa] gi|222858663|gb|EEE96210.1| predicted protein [Populus trichocarpa]

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/231 (43%), Positives = 134/231 (58%), Gaps = 44/231 (19%)

Query: 1   MANVGRTRRDG---EKTLTNNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDS 57
           MAN+ R  R G   E+T + + +V+E+VPSS WTEDSN H LLVDLPDF+KE+VKLQVD 
Sbjct: 1   MANI-RGVRSGWIAERTRSRHHLVEEYVPSSAWTEDSNSHQLLVDLPDFRKEEVKLQVDD 59

Query: 58  SGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQ 117
            G +TVSGE L ++++ I  FEQ F LP NSD D I+GKFDGE+LYVTVPK  +EE++++
Sbjct: 60  PGKLTVSGERLVNNSKCIY-FEQTFKLPQNSDTDNITGKFDGEILYVTVPK--QEETSKE 116

Query: 118 PSL--PASASGENEQQILHRNDDIPENVVEESNDHQMREGDDDRACQTNNKEKKSNKSEK 175
           P L  P S  G+                                  Q  N E    K   
Sbjct: 117 PDLNQPNSTIGD----------------------------------QKTNNEILEEKESS 142

Query: 176 DSCVDSFGEDFLRKWGNE-PSHPFERGMKILRRNKGIIITAVLAFSLGVLL 225
               D +     + WG E  + P E+  +++++NKGI++ AVLAFSLGVL+
Sbjct: 143 GKSRDGYRLVPRKYWGQEDEATPLEKASRMMKKNKGILLMAVLAFSLGVLV 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477445|ref|XP_003609008.1| 16.6 kDa heat shock protein [Medicago truncatula] gi|355510063|gb|AES91205.1| 16.6 kDa heat shock protein [Medicago truncatula] gi|388521773|gb|AFK48948.1| unknown [Medicago truncatula]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 139/258 (53%), Gaps = 33/258 (12%)

Query: 1   MANVGRTRRDGEKTLTNNP-IVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSG 59
           MANV  T R G       P +V++ VP+S WTEDS  HYL+VDLP+F KE VKLQVDSSG
Sbjct: 1   MANVRGTPRYGVIRPVARPSVVEDIVPNSAWTEDSAAHYLVVDLPEFVKEDVKLQVDSSG 60

Query: 60  NITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRA-----KEES 114
            I V GE   S+ + + RF   FP P +S++D I+GKFDG +LYVT+PKR      KE  
Sbjct: 61  RIVVKGERQASEQKRV-RFHLSFPEPNDSEIDNIAGKFDGGILYVTLPKRIVQENNKESD 119

Query: 115 TEQPSLPASASGE---------------NEQQILH--RNDDIPENV--VEESNDHQMR-- 153
           TE+  +      E               + Q + H  R DD  ++V  VE  +DH     
Sbjct: 120 TEKAGIHDVKRAEEIDSHTTNADDDSRDHNQHVGHVEREDDHNQHVGRVEHEDDHNQHVR 179

Query: 154 --EGDDDRACQTNNKEKKSNKSEKDSCVDSFGEDFLRKWGNEPSHPFERGMKILRRNKGI 211
             E +DD      ++E +  + E     D F E  +RKW  E        + +L +NKGI
Sbjct: 180 HVEHEDDHNQHVGHEEHEHKQIENAHMRD-FSEQVMRKWDQETM--LRSALDVLMKNKGI 236

Query: 212 IITAVLAFSLGVLLSRKF 229
           + TAV+AFSLG+ +S KF
Sbjct: 237 VATAVIAFSLGMYVSSKF 254

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073606|gb|ACJ85163.1| unknown [Medicago truncatula]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 139/258 (53%), Gaps = 33/258 (12%)

Query: 1   MANVGRTRRDGEKTLTNNP-IVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSG 59
           MANV  T R G       P +V++ VP+S WTEDS  HYL+VDLP+F KE VKLQVDSSG
Sbjct: 1   MANVRGTPRYGVIRPVARPSVVEDIVPNSAWTEDSAAHYLVVDLPEFVKEDVKLQVDSSG 60

Query: 60  NITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRA-----KEES 114
            I V GE   S+ + + RF   FP P +S++D I+GKFDG +LYVT+PKR      KE  
Sbjct: 61  RIVVKGERQASEQKRV-RFHLSFPEPNDSEIDNIAGKFDGGILYVTLPKRIVQENNKESD 119

Query: 115 TEQPSLPASASGE---------------NEQQILH--RNDDIPENV--VEESNDHQMR-- 153
           TE+  +      E               + Q + H  R DD  ++V  VE  +DH     
Sbjct: 120 TEKAGIHDVKRAEEIGSHTTNADDDSRDHNQHVGHVEREDDHNQHVGRVEHEDDHNQHVR 179

Query: 154 --EGDDDRACQTNNKEKKSNKSEKDSCVDSFGEDFLRKWGNEPSHPFERGMKILRRNKGI 211
             E +DD      ++E +  + E     D F E  +RKW  E        + +L +NKGI
Sbjct: 180 HVEHEDDHNQHVGHEEHEHKQIENAHMRD-FSEQVMRKWDQETM--LRSALDVLMKNKGI 236

Query: 212 IITAVLAFSLGVLLSRKF 229
           + TAV+AFSLG+ +S KF
Sbjct: 237 VATAVIAFSLGMYVSSKF 254

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519035|ref|XP_003528180.1| PREDICTED: uncharacterized protein LOC100802285 [Glycine max]

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 124/234 (52%), Gaps = 48/234 (20%)

Query: 4   VGRTRRDGEKTLTNNP----IVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSS- 58
            G TRRDG +T +       +V+E VP+SGWT+D + H+LLVDLP+F+KE+V LQVD S 
Sbjct: 6   AGITRRDGTRTTSAAAAAAAVVEEIVPNSGWTDDHSSHFLLVDLPEFRKEEVTLQVDGSD 65

Query: 59  GNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQP 118
           G I V GE  T++ + I  FE  FPLPP+SD+D ISG FD E+L+V VPKRA  +     
Sbjct: 66  GRIIVKGERQTNEQKRI-HFELAFPLPPDSDVDNISGNFDSEILHVHVPKRASHQE---- 120

Query: 119 SLPASASGENEQQILHRNDDIPENVVEESNDHQMREGDDDRACQTNNKEKKSNKSEKDSC 178
                          HR            + H++    ++ +           + ++   
Sbjct: 121 ---------------HR-----------ESGHEIERASNNGSV---------GRPQEIYM 145

Query: 179 VDSFGEDFLRKWGNEPSHPFERGM-KILRRNKGIIITAVLAFSLGVLLSRKFGS 231
            + + +   RK   E      R + ++L RNKG++ TAV+AFS G+ +S KF S
Sbjct: 146 DNGYSKKLTRKL--EQKRDMSRALVEVLMRNKGVVTTAVVAFSFGLYVSNKFHS 197

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549593|ref|XP_002515848.1| small heat-shock protein, putative [Ricinus communis] gi|223545003|gb|EEF46517.1| small heat-shock protein, putative [Ricinus communis]

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 24  FVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFP 83
           F P++ W  D+    LL+ LP FKKEQ+K+QV S+ N+ + GE    DN++  RF + F 
Sbjct: 11  FEPATEWVRDTEYDTLLIYLPGFKKEQLKVQVTSNPNLRIFGERSLGDNKW-SRFSKEFR 69

Query: 84  LPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQILHRNDDIPENV 143
           +P + D +KIS  F+G +L +  PK  K  +  Q +  +S +     Q   R  ++P  +
Sbjct: 70  IPSSYDTNKISANFEGGILKIKHPKITKPATKPQENANSSLAEATNDQPHQRAQEVPPKI 129

Query: 144 VEESNDHQMREGDDDRACQTNNKE 167
             E+ND   R  D+ +      KE
Sbjct: 130 KTETNDASYRNADNSQNISDKKKE 153

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15209175|gb|AAK91893.1|AC091627_6 Hsp20/alpha crystallin family protein [Solanum demissum]

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 31/241 (12%)

Query: 18  NPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMR 77
           N   ++FVP++   ++ +   LL+DL  FKKEQV++Q+  +G + +SG+   +++++ +R
Sbjct: 9   NQTYEDFVPTTELVQEQDSDTLLIDLTGFKKEQVRVQLIRTGVLKISGQRPVAESKW-LR 67

Query: 78  FEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQILHRND 137
           F++ FP+  N D  KIS KF+  +LYV  PK       +   LP S   + +Q+   +  
Sbjct: 68  FQKDFPVSQNCDKTKISAKFENGILYVKQPKLITSSENKGQELPTS-DAQRQQKPEDKPQ 126

Query: 138 DIPE-------------NVVEESNDHQMREGDDDRACQTNNKEKKSNKSEKDSCVDSFGE 184
             P+                EE   HQ    D     + N KE K + +EK +  ++ G 
Sbjct: 127 PTPQKKDEEQTKDEKTPTPTEELPKHQATNADKPEMEEPNTKEAK-DLAEK-TPAENTGA 184

Query: 185 DFLRKWGNEPSHP--------------FERGMKILRRNKGIIITAVLAFSLGVLLSRKFG 230
               + GN PS+                   +K+ R+   + + A+L   +G+ +S K  
Sbjct: 185 SSTVEDGNRPSYACRLDKDAFIGTAAVLAEKLKMTRKLMNMTLIALLVLGIGLYISNKMK 244

Query: 231 S 231
           S
Sbjct: 245 S 245

Source: Solanum demissum

Species: Solanum demissum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
TAIR|locus:2045144	224	AT2G27140 "AT2G27140" [Arabido	0.861	0.915	0.278	2.3e-16
TAIR|locus:2147137	249	AT5G20970 "AT5G20970" [Arabido	0.521	0.497	0.314	5.4e-15
TAIR|locus:2175438	366	RTM2 "AT5G04890" [Arabidopsis	0.554	0.360	0.342	3.8e-13
UNIPROTKB|Q943Q3	150	HSP16.6 "16.6 kDa heat shock p	0.373	0.593	0.330	8e-09
TAIR|locus:2122774	195	ATHSP22.0 "AT4G10250" [Arabido	0.415	0.507	0.281	3.5e-08
TAIR|locus:2141632	134	AT4G21870 [Arabidopsis thalian	0.394	0.701	0.298	5.4e-08
TAIR|locus:2075256	156	HSP17.4 "heat shock protein 17	0.453	0.692	0.311	7e-08
POMBASE|SPBC3E7.02c	143	hsp16 "heat shock protein Hsp1	0.420	0.699	0.345	1.2e-07
TAIR|locus:2024862	157	AT1G53540 [Arabidopsis thalian	0.390	0.592	0.307	1.2e-07
TAIR|locus:2024997	157	AT1G07400 [Arabidopsis thalian	0.357	0.541	0.309	2e-07

TAIR|locus:2045144 AT2G27140 "AT2G27140" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 62/223 (27%), Positives = 104/223 (46%)

Query:    18 NPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMR 77
             N I  EF P S W  +     L + LP F+KEQ+K+QV ++  + V G+     N++I R
Sbjct:    11 NRIYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGANKWI-R 69

Query:    78 FEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQILHRND 137
             F + FP+PPN D+D +S KF+G  L V +P+   E   +QPS   +A+      +   N 
Sbjct:    70 FRKEFPIPPNIDVDSVSAKFEGANLVVRLPRT--EPMGKQPSPIGTAT--KPPPVPKENP 125

Query:   138 DIPENVVEESND--HQMREGDDDRACQTXXXXXXXXXXXXDSCVDSFGEDFLRKWGNEPS 195
             ++P    +E      + RE + +   Q             +   ++  +D+  K  NE  
Sbjct:   126 NLPSPSAKEKVQPPKETRENETELEKQAEKIQSPKPARENE---EALNQDYRSKV-NEYK 181

Query:   196 HPFERGMKILRRNK-----GIII--TAVLAFSLGVLLSRKFGS 231
                   + +++ N+     G+++   AVL  SLG    + F S
Sbjct:   182 ENLGGYVALMKNNRTALTAGVVVPAAAVLLLSLGFYAGQMFTS 224

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009408 "response to heat" evidence=ISS;RCA

GO:0016020 "membrane" evidence=IDA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2147137 AT5G20970 "AT5G20970" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 40/127 (31%), Positives = 68/127 (53%)

Query:    20 IVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFE 79
             + +EF P++ WT + +   L+ DLP FKKEQ+K+ V ++  + ++GE  T  N++I RF 
Sbjct:     9 VYQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWI-RFH 67

Query:    80 QMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQILHRNDDI 139
             Q  P+P   D+D +S  F    LY+  PK   E    +P  P      ++ +   +    
Sbjct:    68 QEIPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPPTPVIMKPHDQHE--RKQGQG 125

Query:   140 PENVVEE 146
             P+ +VE+
Sbjct:   126 PKAMVEK 132

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0009408 "response to heat" evidence=ISS

TAIR|locus:2175438 RTM2 "AT5G04890" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
 Identities = 49/143 (34%), Positives = 76/143 (53%)

Query:    22 KEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQ-VDSSGNITVSGEMLTSDNRYIMRFEQ 80
             ++FVP S W +      L +DL  F KEQ+K+  V SS  I V+GE   + NR   RF +
Sbjct:    17 EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA-NRKWSRFNE 75

Query:    81 MFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENEQQILHRNDDIP 140
             +F +P N  +DKI G F   +L +T+PK   E  T+   LP ++    E   L +   + 
Sbjct:    76 VFTVPQNCLVDKIHGSFKNNVLTITMPK---ETITKVAYLPETS--RTEAAALEKAAKLE 130

Query:   141 EN-VVEESNDHQMREGDDDRACQ 162
             E  ++EES   + +E +++ A Q
Sbjct:   131 EKRLLEES---RRKEKEEEEAKQ 150

GO:0003674 "molecular_function" evidence=ND

GO:0009408 "response to heat" evidence=IEP;RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

GO:0009615 "response to virus" evidence=IMP

UNIPROTKB|Q943Q3 HSP16.6 "16.6 kDa heat shock protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 133 (51.9 bits), Expect = 8.0e-09, P = 8.0e-09
 Identities = 35/106 (33%), Positives = 54/106 (50%)

Query:    30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLT-------SDNRY--IMR--- 77
             W E    H    DLP  +K+Q K++V+  G + +SGE          +D R+  + R   
Sbjct:    44 WKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSG 103

Query:    78 -FEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPA 122
              F++ F LP  + +D++S   D  +L VTVPK    E T++P L A
Sbjct:   104 KFQRRFRLPRGARVDQVSASMDNGVLTVTVPK----EETKKPQLKA 145

GO:0009408 "response to heat" evidence=IEP

TAIR|locus:2122774 ATHSP22.0 "AT4G10250" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 31/110 (28%), Positives = 59/110 (53%)

Query:    30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDN----------RYIMRFE 79
             W E + GH +++D+P  KK++VK++V+ +G + VSGE    +           R   +F 
Sbjct:    75 WKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFW 134

Query:    80 QMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPASASGENE 129
             + F LP N DM+ +  K +  +L + + K + E+  + P +   A+ E++
Sbjct:   135 RQFKLPDNVDMESVKAKLENGVLTINLTKLSPEK-VKGPRVVNIAAEEDQ 183

GO:0003674 "molecular_function" evidence=ND

GO:0009408 "response to heat" evidence=IEP;ISS;RCA

GO:0009507 "chloroplast" evidence=ISM

GO:0006457 "protein folding" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2141632 AT4G21870 [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 29/97 (29%), Positives = 53/97 (54%)

Query:    30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEM--LTSDNRYIMRFEQMFPLPPN 87
             W++  + H   VDLP  +KE++K++++ S  + +  E   ++  ++ +  F++ F LP +
Sbjct:    30 WSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFRLPES 89

Query:    88 SDMDKISGKFDGELLYVTVPKRAKEESTEQPS-LPAS 123
              DM  IS  ++  +L V VPKR        PS +P S
Sbjct:    90 IDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPES 126

GO:0005737 "cytoplasm" evidence=ISM

GO:0009408 "response to heat" evidence=ISS;RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2075256 HSP17.4 "heat shock protein 17.4" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 7.0e-08, P = 7.0e-08
 Identities = 38/122 (31%), Positives = 58/122 (47%)

Query:    15 LTNNPI--VKEFVPSS-GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLT-- 69
             LTN P   V  F  +   W E    H    D+P  KKE+VK++V+    + +SGE  +  
Sbjct:    35 LTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSEN 94

Query:    70 ---SDN-----RYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLP 121
                SD      R   +F + F LP N+ ++++    +  +L VTVPK  +E   E  S+ 
Sbjct:    95 EEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPK-VQESKPEVKSVD 153

Query:   122 AS 123
              S
Sbjct:   154 IS 155

GO:0005737 "cytoplasm" evidence=ISM

GO:0009408 "response to heat" evidence=IEP

POMBASE|SPBC3E7.02c hsp16 "heat shock protein Hsp16" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 123 (48.4 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 39/113 (34%), Positives = 56/113 (49%)

Query:    17 NNPIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEML-------T 69
             NN I  E  PS    E  +   + V+LP  KKE V++  DS G +T+SGE++       T
Sbjct:    28 NNQIPGELSPSIDVHEGKDTVSVDVELPGVKKEDVQVHYDS-GKLTISGEVVNERKNEST 86

Query:    70 SDN-RYIMR----FEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQ 117
               N R+  R    F +   +P   D D+I   F   LL VT+PK  K ++ +Q
Sbjct:    87 EGNQRWSERRFGSFSRTITIPAKIDADRIEANFSNGLLTVTLPKVEKSQTKKQ 139

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009267 "cellular response to starvation" evidence=IEP

GO:0031990 "mRNA export from nucleus in response to heat stress" evidence=IMP

GO:0034620 "cellular response to unfolded protein" evidence=IDA

GO:0051082 "unfolded protein binding" evidence=IDA

GO:0061077 "chaperone-mediated protein folding" evidence=NAS

TAIR|locus:2024862 AT1G53540 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 32/104 (30%), Positives = 49/104 (47%)

Query:    30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDN----------RYIMRFE 79
             W E    H    DLP  +KE+VK++V+    + +SGE    +           R   +F 
Sbjct:    54 WRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFT 113

Query:    80 QMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQPSLPAS 123
             + F LP N+ M++I    +  +L VTVPK   E+  E  S+  S
Sbjct:   114 RRFRLPENAKMEEIKASMENGVLSVTVPK-VPEKKPEVKSIDIS 156

GO:0005737 "cytoplasm" evidence=ISM

GO:0009408 "response to heat" evidence=ISS;RCA

GO:0006457 "protein folding" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2024997 AT1G07400 [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 30/97 (30%), Positives = 47/97 (48%)

Query:    30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDN----------RYIMRFE 79
             W E +  H    DLP  KKE+VK++++    + +SGE                R   +F 
Sbjct:    52 WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query:    80 QMFPLPPNSDMDKISGKFDGELLYVTVPK--RAKEES 114
             + F LP N  MD++    +  +L VTVPK   AK+++
Sbjct:   112 RKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKA 148

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009408 "response to heat" evidence=ISS

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	238
cd06464	88	cd06464, ACD_sHsps-like, Alpha-crystallin domain (	3e-14
cd00298	80	cd00298, ACD_sHsps_p23-like, This domain family in	3e-12
cd06472	92	cd06472, ACD_ScHsp26_like, Alpha crystallin domain	4e-11
pfam00011	101	pfam00011, HSP20, Hsp20/alpha crystallin family	1e-08
COG0071	146	COG0071, IbpA, Molecular chaperone (small heat sho	2e-08
cd06471	93	cd06471, ACD_LpsHSP_like, Group of bacterial prote	3e-06
cd06526	83	cd06526, metazoan_ACD, Alpha-crystallin domain (AC	2e-04

>gnl|CDD|107221 cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 66.0 bits (162), Expect = 3e-14
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGE---------MLTSDNRYIMRFEQ 80
             E  + + +  DLP FKKE +K++V+  G +T+SGE               R    F +
Sbjct: 2   VYETDDAYVVEADLPGFKKEDIKVEVED-GVLTISGEREEEEEEEENYLRRERSYGSFSR 60

Query: 81  MFPLPPNSDMDKISGKFDGELLYVTVPK 108
            F LP + D DKI    +  +L +T+PK
Sbjct: 61  SFRLPEDVDPDKIKASLENGVLTITLPK 88

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 88

>gnl|CDD|107219 cd00298, ACD_sHsps_p23-like, This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIM--RFEQMFPLPPN 87
           W +  +   + VDLP  KKE +K++V+    +T+SG+    + R      FE+ F LP +
Sbjct: 1   WYQTDDEVVVTVDLPGVKKEDIKVEVED-NVLTISGKREEEEERERSYGEFERSFELPED 59

Query: 88  SDMDKISGKFDGELLYVTVPK 108
            D +K     +  +L +T+PK
Sbjct: 60  VDPEKSKASLENGVLEITLPK 80

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Length = 80

>gnl|CDD|107229 cd06472, ACD_ScHsp26_like, Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

 Score = 57.3 bits (139), Expect = 4e-11
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 18/93 (19%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGE--------------MLTSDNRYI 75
           W E    H    D+P  KKE VK++V+    + +SGE              +  S  R++
Sbjct: 4   WKETPEAHVFKADVPGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFV 63

Query: 76  MRFEQMFPLPPNSDMDKISGKFDGELLYVTVPK 108
            RF     LP N+D D++    +  +L VTVPK
Sbjct: 64  RRFR----LPENADADEVKAFLENGVLTVTVPK 92

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative stress. Also belonging to this group is wheat HSP16.9 which differs in quaternary structure from the shell-type particles of ScHsp26, it assembles as a dodecameric double disc, with each disc organized as a trimer of dimers. Length = 92

>gnl|CDD|215655 pfam00011, HSP20, Hsp20/alpha crystallin family

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGE---MLTSDNRYIMR-----FEQM 81
             ED +   + +D+P FK E++K++V+    + V G+       D+          F + 
Sbjct: 2   IKEDKDAFVVKLDVPGFKPEELKVKVED-NRVLVKGKHEKEEEDDHGLRSERSYRSFSRK 60

Query: 82  FPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQP 118
           F LP N+D DK+       +L VTVPK    E   + 
Sbjct: 61  FVLPENADPDKVKASLKDGVLTVTVPKLEPPEKKPRR 97

Length = 101

>gnl|CDD|223149 COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 11/105 (10%)

Query: 23  EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGE----------MLTSDN 72
              P     E  + + +  +LP   KE +++ V+    +T+ GE                
Sbjct: 38  TGTPPVDIEETDDEYRITAELPGVDKEDIEITVEG-NTLTIRGEREEEEEEEEEGYLRRE 96

Query: 73  RYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEESTEQ 117
           R    FE+ F LP   D + I  K+   LL VT+PK   EE   +
Sbjct: 97  RAYGEFERTFRLPEKVDPEVIKAKYKNGLLTVTLPKAEPEEKKPK 141

Length = 146

>gnl|CDD|107228 cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 14/89 (15%)

Query: 32  EDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS------DNRYIMR------FE 79
           E  + + +  DLP FKKE +KL     G +T+S +   S         YI R      F 
Sbjct: 7   ETDDEYIVEADLPGFKKEDIKLDYKD-GYLTISAKRDESKDEKDKKGNYIRRERYYGSFS 65

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPK 108
           + F LP N D ++I  K++  +L +T+PK
Sbjct: 66  RSFYLP-NVDEEEIKAKYENGVLKITLPK 93

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane. Length = 93

>gnl|CDD|107247 cd06526, metazoan_ACD, Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 6/82 (7%)

Query: 32  EDSNGHYLL-VDLPDFKKEQVKLQVDSSGNITVSG--EMLTSDNRYIMR-FEQMFPLPPN 87
            D +  + + +D+  FK E++K++V S   + V G  E    ++ Y+ R F + + LP  
Sbjct: 3   NDDDEKFQVTLDVKGFKPEELKVKV-SDNKLVVEGKHEEREDEHGYVSREFTRRYQLPEG 61

Query: 88  SDMDKISGKFDGE-LLYVTVPK 108
            D D ++     + +L +  PK
Sbjct: 62  VDPDSVTSSLSSDGVLTIEAPK 83

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 83

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	238
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	99.86
COG0071	146	IbpA Molecular chaperone (small heat shock protein	99.86
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	99.85
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	99.85
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	99.85
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	99.84
PRK11597	142	heat shock chaperone IbpB; Provisional	99.84
PRK10743	137	heat shock protein IbpA; Provisional	99.83
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	99.83
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	99.83
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	99.82
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	99.81
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	99.81
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	99.79
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	99.78
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	99.78
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	99.75
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	99.74
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	99.73
KOG3591	173	consensus Alpha crystallins [Posttranslational mod	99.66
KOG0710	196	consensus Molecular chaperone (small heat-shock pr	99.45
cd00298	80	ACD_sHsps_p23-like This domain family includes the	99.45
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	99.21
cd06463	84	p23_like Proteins containing this p23_like domain	98.86
PF05455	177	GvpH: GvpH; InterPro: IPR008633 This family consis	98.68
cd06466	84	p23_CS_SGT1_like p23_like domain similar to the C-	98.58
PF04969	79	CS: CS domain; InterPro: IPR017447 The function of	98.46
cd06465	108	p23_hB-ind1_like p23_like domain found in human (h	98.01
PF08190	328	PIH1: pre-RNA processing PIH1/Nop17	97.81
cd06467	85	p23_NUDC_like p23_like domain of NUD (nuclear dist	97.73
cd06489	84	p23_CS_hSgt1_like p23_like domain similar to the C	97.7
cd06488	87	p23_melusin_like p23_like domain similar to the C-	97.59
cd06468	92	p23_CacyBP p23_like domain found in proteins simil	97.53
cd06493	85	p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear	97.46
cd06494	93	p23_NUDCD2_like p23-like NUD (nuclear distribution	97.02
cd00237	106	p23 p23 binds heat shock protein (Hsp)90 and parti	96.97
PLN03088	356	SGT1, suppressor of G2 allele of SKP1; Provisional	96.21
cd06490	87	p23_NCB5OR p23_like domain found in NAD(P)H cytoch	95.38
cd06492	87	p23_mNUDC_like p23-like NUD (nuclear distribution)	95.15
KOG1309	196	consensus Suppressor of G2 allele of skp1 [Signal	95.08
cd06495	102	p23_NUDCD3_like p23-like NUD (nuclear distribution	94.76

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=99.86  E-value=1.4e-21  Score=147.18  Aligned_cols=79  Identities=22%  Similarity=0.339  Sum_probs=74.4

Q ss_pred             eEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEE-eCCEEEEEEe
Q 026451           29 GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKF-DGELLYVTVP  107 (238)
Q Consensus        29 di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL~ItlP  107 (238)
                      ||.++++.|+|.++||||+|++|+|++. ++.|+|+|+++..++.+.++|.|+|.||.+||+++|+|+| +||+|+|+++
T Consensus         2 ~v~e~~~~~~v~~dlpG~~pedi~V~v~-~~~L~I~ger~~~~~~~~g~F~R~~~LP~~vd~e~v~A~l~~~GvL~I~~~   80 (81)
T cd06479           2 NVKTLGDTYQFAVDVSDFSPEDIIVTTS-NNQIEVHAEKLASDGTVMNTFTHKCQLPEDVDPTSVSSSLGEDGTLTIKAR   80 (81)
T ss_pred             CccCcCCeEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEeccCCCEEEEEEEEEECCCCcCHHHeEEEecCCCEEEEEec
Confidence            7899999999999999999999999999 9999999999776666668999999999999999999998 8999999998


Q ss_pred             C
Q 026451          108 K  108 (238)
Q Consensus       108 K  108 (238)
                      |
T Consensus        81 ~   81 (81)
T cd06479          81 R   81 (81)
T ss_pred             C
Confidence            6

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=99.86  E-value=3.3e-21  Score=158.79  Aligned_cols=91  Identities=30%  Similarity=0.484  Sum_probs=82.0

Q ss_pred             ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee----c------ceEeeEEEEEEECCCCCccCC
Q 026451           23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS----D------NRYIMRFEQMFPLPPNSDMDK   92 (238)
Q Consensus        23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~----e------~~~~r~F~r~~~LP~~vD~~~   92 (238)
                      .+.|++||+++++.|.|.++||||++++|+|++. ++.|+|+|++...    +      ++..+.|+|+|.||..+|.+.
T Consensus        38 ~~~P~vdi~e~~~~~~I~~elPG~~kedI~I~~~-~~~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~  116 (146)
T COG0071          38 TGTPPVDIEETDDEYRITAELPGVDKEDIEITVE-GNTLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEV  116 (146)
T ss_pred             CCCCcEEEEEcCCEEEEEEEcCCCChHHeEEEEE-CCEEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccc
Confidence            4679999999999999999999999999999999 9999999998752    1      223469999999999999999


Q ss_pred             eeEEEeCCEEEEEEeCcCCccC
Q 026451           93 ISGKFDGELLYVTVPKRAKEES  114 (238)
Q Consensus        93 I~A~~~dGvL~ItlPK~~~~~~  114 (238)
                      |+|+|.||||+|+|||..+++.
T Consensus       117 ~~A~~~nGvL~I~lpk~~~~~~  138 (146)
T COG0071         117 IKAKYKNGLLTVTLPKAEPEEK  138 (146)
T ss_pred             eeeEeeCcEEEEEEeccccccc
Confidence            9999999999999999987653

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=99.85  E-value=3.8e-21  Score=146.62  Aligned_cols=82  Identities=35%  Similarity=0.599  Sum_probs=72.4

Q ss_pred             ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee----cc------eEeeEEEEEEECCCCCccCCeeEE
Q 026451           27 SSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS----DN------RYIMRFEQMFPLPPNSDMDKISGK   96 (238)
Q Consensus        27 ~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~----e~------~~~r~F~r~~~LP~~vD~~~I~A~   96 (238)
                      ++||+|+++.|+|.++||||++++|+|++..++.|+|+|++...    .+      +..+.|.|+|.||.++|.++|+|+
T Consensus         1 ~~dv~E~~~~~~i~~~lPGv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~~i~A~   80 (92)
T cd06472           1 RVDWKETPEAHVFKADVPGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADADEVKAF   80 (92)
T ss_pred             CccEEEcCCeEEEEEECCCCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHHHCEEE
Confidence            47999999999999999999999999999833589999987543    11      223699999999999999999999


Q ss_pred             EeCCEEEEEEeC
Q 026451           97 FDGELLYVTVPK  108 (238)
Q Consensus        97 ~~dGvL~ItlPK  108 (238)
                      |+||||+|++||
T Consensus        81 ~~nGvL~I~lPK   92 (92)
T cd06472          81 LENGVLTVTVPK   92 (92)
T ss_pred             EECCEEEEEecC
Confidence            999999999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=99.85  E-value=5.8e-21  Score=145.01  Aligned_cols=79  Identities=19%  Similarity=0.338  Sum_probs=71.9

Q ss_pred             eEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEE-eCCEEEE
Q 026451           29 GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKF-DGELLYV  104 (238)
Q Consensus        29 di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL~I  104 (238)
                      +|+++++.|.|.++||||+|++|+|++. ++.|+|+|++...   .+.+.+.|.|+|.||+++|.++|+|+| +||||+|
T Consensus         4 ~v~e~~~~~~v~~dlpG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~Vd~~~i~A~~~~dGvL~I   82 (86)
T cd06497           4 EVRSDRDKFTIYLDVKHFSPEDLTVKVL-DDYVEIHGKHSERQDDHGYISREFHRRYRLPSNVDQSAITCSLSADGMLTF   82 (86)
T ss_pred             eEEEcCCEEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHeEEEeCCCCEEEE
Confidence            7899999999999999999999999999 9999999987543   234446899999999999999999999 6999999


Q ss_pred             EEeC
Q 026451          105 TVPK  108 (238)
Q Consensus       105 tlPK  108 (238)
                      ++||
T Consensus        83 ~~PK   86 (86)
T cd06497          83 SGPK   86 (86)
T ss_pred             EecC
Confidence            9998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=99.85  E-value=1.1e-20  Score=142.46  Aligned_cols=79  Identities=18%  Similarity=0.320  Sum_probs=71.0

Q ss_pred             eEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEE-eCCEEEE
Q 026451           29 GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKF-DGELLYV  104 (238)
Q Consensus        29 di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL~I  104 (238)
                      ++.+++++|.|.++||||+|++|+|++. ++.|+|+|++...   .+.+.+.|.|+|.||.+||.++|+|+| +||+|+|
T Consensus         1 ~~~~~~~~~~v~~dlpG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~dGvL~I   79 (83)
T cd06478           1 EVRLDKDRFSVNLDVKHFSPEELSVKVL-GDFVEIHGKHEERQDEHGFISREFHRRYRLPPGVDPAAITSSLSADGVLTI   79 (83)
T ss_pred             CeeecCceEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEceEcCCCCEEEEEEEEEEECCCCcChHHeEEEECCCCEEEE
Confidence            4688999999999999999999999999 9999999987542   234456899999999999999999999 5999999


Q ss_pred             EEeC
Q 026451          105 TVPK  108 (238)
Q Consensus       105 tlPK  108 (238)
                      ++||
T Consensus        80 ~~PK   83 (83)
T cd06478          80 SGPR   83 (83)
T ss_pred             EecC
Confidence            9998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=99.84  E-value=1.1e-20  Score=143.06  Aligned_cols=79  Identities=18%  Similarity=0.311  Sum_probs=71.3

Q ss_pred             EEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEEe-CCEEEEE
Q 026451           30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKFD-GELLYVT  105 (238)
Q Consensus        30 i~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~~-dGvL~It  105 (238)
                      +..++++|.|.++||||+|++|+|++. ++.|+|+|++...   .+.+.+.|.|+|.||.++|.++|+|+|+ ||+|+|+
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~~~dGvL~I~   80 (84)
T cd06498           2 MRLEKDKFSVNLDVKHFSPEELKVKVL-GDFIEIHGKHEERQDEHGFISREFQRKYRIPADVDPLTITSSLSPDGVLTVC   80 (84)
T ss_pred             eEeCCceEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHcEEEeCCCCEEEEE
Confidence            678899999999999999999999999 9999999976543   2345578999999999999999999996 9999999


Q ss_pred             EeCc
Q 026451          106 VPKR  109 (238)
Q Consensus       106 lPK~  109 (238)
                      +||.
T Consensus        81 lPk~   84 (84)
T cd06498          81 GPRK   84 (84)
T ss_pred             EeCC
Confidence            9985

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=99.84  E-value=1.6e-20  Score=155.16  Aligned_cols=89  Identities=20%  Similarity=0.322  Sum_probs=75.5

Q ss_pred             ccccceeEEE-cCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee--cc------eEeeEEEEEEECCCCCccCCe
Q 026451           23 EFVPSSGWTE-DSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS--DN------RYIMRFEQMFPLPPNSDMDKI   93 (238)
Q Consensus        23 ~~~P~~di~e-~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~--e~------~~~r~F~r~~~LP~~vD~~~I   93 (238)
                      .+.|++||++ +++.|.|.++||||++++|+|.|+ ++.|+|+|++...  +.      +..+.|.|+|.||++||.+  
T Consensus        30 ~~~P~vdI~e~~~~~y~v~adlPGv~kedi~V~v~-~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~f~LP~~vd~~--  106 (142)
T PRK11597         30 QSFPPYNIEKSDDNHYRITLALAGFRQEDLDIQLE-GTRLTVKGTPEQPEKEVKWLHQGLVNQPFSLSFTLAENMEVS--  106 (142)
T ss_pred             CCCCcEEEEEcCCCEEEEEEEeCCCCHHHeEEEEE-CCEEEEEEEEccccCCCcEEEEEEeCcEEEEEEECCCCcccC--
Confidence            3459999998 578999999999999999999999 9999999987543  11      2235899999999999998  


Q ss_pred             eEEEeCCEEEEEEeCcCCccC
Q 026451           94 SGKFDGELLYVTVPKRAKEES  114 (238)
Q Consensus        94 ~A~~~dGvL~ItlPK~~~~~~  114 (238)
                      +|+|+||||+|+|||..+++.
T Consensus       107 ~A~~~nGVL~I~lPK~~~~~~  127 (142)
T PRK11597        107 GATFVNGLLHIDLIRNEPEAI  127 (142)
T ss_pred             cCEEcCCEEEEEEeccCcccc
Confidence            599999999999999754433

>PRK10743 heat shock protein IbpA; Provisional

Probab=99.83  E-value=2.4e-20  Score=153.21  Aligned_cols=83  Identities=17%  Similarity=0.290  Sum_probs=73.4

Q ss_pred             cceeEEE-cCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec--c------eEeeEEEEEEECCCCCccCCeeEE
Q 026451           26 PSSGWTE-DSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD--N------RYIMRFEQMFPLPPNSDMDKISGK   96 (238)
Q Consensus        26 P~~di~e-~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e--~------~~~r~F~r~~~LP~~vD~~~I~A~   96 (238)
                      |++||.+ +++.|.|.++||||++++|+|+++ ++.|+|+|++....  .      +..+.|.|+|.||.+||.++  |+
T Consensus        35 p~~di~ee~~~~~~v~aelPGv~kedi~V~v~-~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~~~LP~~Vd~~~--A~  111 (137)
T PRK10743         35 PPYNVELVDENHYRIAIAVAGFAESELEITAQ-DNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRG--AN  111 (137)
T ss_pred             CcEEEEEcCCCEEEEEEECCCCCHHHeEEEEE-CCEEEEEEEECccccCCcEEEEEEECCEEEEEEECCCCcccCc--CE
Confidence            8999994 899999999999999999999999 99999999876431  1      23358999999999999995  99


Q ss_pred             EeCCEEEEEEeCcCC
Q 026451           97 FDGELLYVTVPKRAK  111 (238)
Q Consensus        97 ~~dGvL~ItlPK~~~  111 (238)
                      |+||||+|+|||..+
T Consensus       112 ~~dGVL~I~lPK~~~  126 (137)
T PRK10743        112 LVNGLLYIDLERVIP  126 (137)
T ss_pred             EeCCEEEEEEeCCCc
Confidence            999999999999744

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=99.83  E-value=3.9e-20  Score=139.84  Aligned_cols=78  Identities=13%  Similarity=0.260  Sum_probs=70.0

Q ss_pred             EEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEEe-CCEEEEE
Q 026451           30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKFD-GELLYVT  105 (238)
Q Consensus        30 i~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~~-dGvL~It  105 (238)
                      +..++++|.|.++||||+|++|+|++. ++.|+|+|++...   .+.+.+.|.|+|.||.++|.++|+|+|+ ||+|+|+
T Consensus         2 ~~~~~d~y~v~~dlpG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~v~A~~~~dGvL~I~   80 (83)
T cd06476           2 VESEDDKYQVFLDVCHFTPDEITVRTV-DNLLEVSARHPQRMDRHGFVSREFTRTYILPMDVDPLLVRASLSHDGILCIQ   80 (83)
T ss_pred             eeccCCeEEEEEEcCCCCHHHeEEEEE-CCEEEEEEEEcceecCCCEEEEEEEEEEECCCCCChhhEEEEecCCCEEEEE
Confidence            356789999999999999999999999 9999999987543   2355579999999999999999999996 9999999


Q ss_pred             EeC
Q 026451          106 VPK  108 (238)
Q Consensus       106 lPK  108 (238)
                      +||
T Consensus        81 ~Pr   83 (83)
T cd06476          81 APR   83 (83)
T ss_pred             ecC
Confidence            997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=99.83  E-value=5.2e-20  Score=139.80  Aligned_cols=79  Identities=18%  Similarity=0.363  Sum_probs=72.4

Q ss_pred             eeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEEe-CCEEE
Q 026451           28 SGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKFD-GELLY  103 (238)
Q Consensus        28 ~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~~-dGvL~  103 (238)
                      .||++++++|.|.++||||+|++|+|++. ++.|+|+|++...   .+.+.++|.|+|.||.++|.++|+|+|. ||+|+
T Consensus         3 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~~f~R~f~LP~~vd~~~v~A~~~~dGvL~   81 (86)
T cd06475           3 SEIRQTADRWKVSLDVNHFAPEELVVKTK-DGVVEITGKHEEKQDEHGFVSRCFTRKYTLPPGVDPTAVTSSLSPDGILT   81 (86)
T ss_pred             ceEEEcCCeEEEEEECCCCCHHHEEEEEE-CCEEEEEEEECcCcCCCCEEEEEEEEEEECCCCCCHHHcEEEECCCCeEE
Confidence            58999999999999999999999999999 9999999988653   2344579999999999999999999997 99999


Q ss_pred             EEEe
Q 026451          104 VTVP  107 (238)
Q Consensus       104 ItlP  107 (238)
                      |++|
T Consensus        82 I~lP   85 (86)
T cd06475          82 VEAP   85 (86)
T ss_pred             EEec
Confidence            9998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=99.82  E-value=5.8e-20  Score=139.86  Aligned_cols=81  Identities=35%  Similarity=0.564  Sum_probs=72.6

Q ss_pred             cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec------c------eEeeEEEEEEECCCCCccCCe
Q 026451           26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD------N------RYIMRFEQMFPLPPNSDMDKI   93 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e------~------~~~r~F~r~~~LP~~vD~~~I   93 (238)
                      |++||+++++.|+|.++||||++++|+|.+. ++.|+|+|++....      +      +..+.|.|.|.|| ++|.+.|
T Consensus         1 ~~~di~e~~~~~~i~~~lPGv~~edi~v~~~-~~~L~I~g~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lp-~v~~~~i   78 (93)
T cd06471           1 MKTDIKETDDEYIVEADLPGFKKEDIKLDYK-DGYLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVDEEEI   78 (93)
T ss_pred             CceeEEEcCCEEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEccccccccccCCEEEEeeeccEEEEEEECC-CCCHHHC
Confidence            4799999999999999999999999999999 99999999886421      1      2335899999998 7999999


Q ss_pred             eEEEeCCEEEEEEeC
Q 026451           94 SGKFDGELLYVTVPK  108 (238)
Q Consensus        94 ~A~~~dGvL~ItlPK  108 (238)
                      +|+|+||+|+|++||
T Consensus        79 ~A~~~dGvL~I~lPK   93 (93)
T cd06471          79 KAKYENGVLKITLPK   93 (93)
T ss_pred             EEEEECCEEEEEEcC
Confidence            999999999999998

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=99.81  E-value=2.1e-19  Score=138.13  Aligned_cols=85  Identities=35%  Similarity=0.626  Sum_probs=70.5

Q ss_pred             eEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEee-e-cce------EeeEEEEEEECCCCCccCCeeEEEeCC
Q 026451           29 GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLT-S-DNR------YIMRFEQMFPLPPNSDMDKISGKFDGE  100 (238)
Q Consensus        29 di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~-~-e~~------~~r~F~r~~~LP~~vD~~~I~A~~~dG  100 (238)
                      ||.+++++|.|.++||||.+++|+|++. ++.|+|+|.+.. . ...      ..+.|.|+|.||+++|.++|+|+|+||
T Consensus         1 di~e~~~~~~i~~~lpG~~~edi~I~~~-~~~L~I~g~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~a~~~~G   79 (102)
T PF00011_consen    1 DIKEDEDEYIIKVDLPGFDKEDIKIKVD-DNKLVISGKRKEEEEDDRYYRSERRYGSFERSIRLPEDVDPDKIKASYENG   79 (102)
T ss_dssp             EEEESSSEEEEEEE-TTS-GGGEEEEEE-TTEEEEEEEEEGEECTTCEEEE-S-SEEEEEEEE-STTB-GGG-EEEETTS
T ss_pred             CeEECCCEEEEEEECCCCChHHEEEEEe-cCccceeceeeeeeeeeeeeecccccceEEEEEcCCCcCCcceEEEEecCC
Confidence            7999999999999999999999999999 999999998882 1 111      225899999999999999999999999


Q ss_pred             EEEEEEeCcCCccC
Q 026451          101 LLYVTVPKRAKEES  114 (238)
Q Consensus       101 vL~ItlPK~~~~~~  114 (238)
                      +|+|++||....+.
T Consensus        80 vL~I~~pk~~~~~~   93 (102)
T PF00011_consen   80 VLTITIPKKEEEED   93 (102)
T ss_dssp             EEEEEEEBSSSCTT
T ss_pred             EEEEEEEccccccC
Confidence            99999999977654

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=99.81  E-value=2.2e-19  Score=136.81  Aligned_cols=80  Identities=16%  Similarity=0.383  Sum_probs=70.8

Q ss_pred             cceeEEEcC-CeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec---c------eEeeEEEEEEECCCCCccCCeeE
Q 026451           26 PSSGWTEDS-NGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD---N------RYIMRFEQMFPLPPNSDMDKISG   95 (238)
Q Consensus        26 P~~di~e~~-d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e---~------~~~r~F~r~~~LP~~vD~~~I~A   95 (238)
                      |++||++++ +.|+|.++||||++++|+|.+. ++.|+|+|++....   .      +..+.|.|+|.||.++|.+  +|
T Consensus         1 p~~di~e~~~~~~~v~~~lPG~~kedi~v~~~-~~~L~I~g~~~~~~~~~~~~~~~e~~~g~f~R~~~LP~~vd~~--~A   77 (90)
T cd06470           1 PPYNIEKTGENNYRITLAVAGFSEDDLEIEVE-NNQLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVK--GA   77 (90)
T ss_pred             CCeeeEEcCCCeEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEcccccCCCcEEEEEEeceEEEEEEECCCCceEC--ee
Confidence            789999975 9999999999999999999999 99999999886542   1      1236999999999999885  79


Q ss_pred             EEeCCEEEEEEeC
Q 026451           96 KFDGELLYVTVPK  108 (238)
Q Consensus        96 ~~~dGvL~ItlPK  108 (238)
                      +|+||+|+|+||+
T Consensus        78 ~~~~GvL~I~l~~   90 (90)
T cd06470          78 ELENGLLTIDLER   90 (90)
T ss_pred             EEeCCEEEEEEEC
Confidence            9999999999986

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=99.79  E-value=6.7e-19  Score=133.29  Aligned_cols=76  Identities=20%  Similarity=0.323  Sum_probs=68.4

Q ss_pred             EEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEE-eCCEEEEEE
Q 026451           31 TEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKF-DGELLYVTV  106 (238)
Q Consensus        31 ~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL~Itl  106 (238)
                      -+++++|.|.++||||+|++|+|++. ++.|+|+|++...   .+.+.+.|.|+|.||.+||.++|+|+| +||||+|+.
T Consensus         3 ~e~~~~~~v~~dlpG~~~edI~V~v~-~~~L~I~ge~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~v~A~~~~dGvL~I~~   81 (83)
T cd06477           3 EEGKPMFQILLDVVQFRPEDIIIQVF-EGWLLIKGQHGVRMDEHGFISRSFTRQYQLPDGVEHKDLSAMLCHDGILVVET   81 (83)
T ss_pred             ccCCceEEEEEEcCCCCHHHeEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcchheEEEEEcCCCEEEEEe
Confidence            46789999999999999999999999 9999999987543   334457999999999999999999998 799999998


Q ss_pred             e
Q 026451          107 P  107 (238)
Q Consensus       107 P  107 (238)
                      |
T Consensus        82 ~   82 (83)
T cd06477          82 K   82 (83)
T ss_pred             c
Confidence            6

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.78  E-value=8.5e-19  Score=131.37  Aligned_cols=74  Identities=22%  Similarity=0.437  Sum_probs=67.5

Q ss_pred             CCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec---ceEeeEEEEEEECCCCCccCCeeEEEeC-CEEEEEEeC
Q 026451           34 SNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD---NRYIMRFEQMFPLPPNSDMDKISGKFDG-ELLYVTVPK  108 (238)
Q Consensus        34 ~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e---~~~~r~F~r~~~LP~~vD~~~I~A~~~d-GvL~ItlPK  108 (238)
                      .+.|.|.++||||++++|+|++. ++.|+|+|++....   +...+.|.|+|.||.++|.++|+|+|.| |+|+|++||
T Consensus         6 ~~~~~v~~dlpG~~~edI~v~v~-~~~L~I~g~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I~~Pk   83 (83)
T cd06526           6 DEKFQVTLDVKGFKPEELKVKVS-DNKLVVEGKHEEREDEHGYVSREFTRRYQLPEGVDPDSVTSSLSSDGVLTIEAPK   83 (83)
T ss_pred             CeeEEEEEECCCCCHHHcEEEEE-CCEEEEEEEEeeeccCCCEEEEEEEEEEECCCCCChHHeEEEeCCCcEEEEEecC
Confidence            46999999999999999999999 99999999887652   3445799999999999999999999997 999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=99.78  E-value=8.8e-19  Score=133.33  Aligned_cols=76  Identities=20%  Similarity=0.375  Sum_probs=67.9

Q ss_pred             EcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec----c---eEeeEEEEEEECCCCCccCCeeEEE-eCCEEE
Q 026451           32 EDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----N---RYIMRFEQMFPLPPNSDMDKISGKF-DGELLY  103 (238)
Q Consensus        32 e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e----~---~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL~  103 (238)
                      +..+.|.|.++||||+|++|+|++. ++.|+|+|++....    .   +..+.|.|+|.||.+||.+.|+|+| +||||+
T Consensus         4 ~~~d~~~v~~dlpG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~~~dGvL~   82 (87)
T cd06481           4 DGKEGFSLKLDVRGFSPEDLSVRVD-GRKLVVTGKREKKNEDEKGSFSYEYQEFVREAQLPEHVDPEAVTCSLSPSGHLH   82 (87)
T ss_pred             CccceEEEEEECCCCChHHeEEEEE-CCEEEEEEEEeeecccCCCcEEEEeeEEEEEEECCCCcChHHeEEEeCCCceEE
Confidence            5678999999999999999999999 99999999875431    2   2347999999999999999999999 899999


Q ss_pred             EEEeC
Q 026451          104 VTVPK  108 (238)
Q Consensus       104 ItlPK  108 (238)
                      |++|+
T Consensus        83 I~~P~   87 (87)
T cd06481          83 IRAPR   87 (87)
T ss_pred             EEcCC
Confidence            99996

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.75  E-value=5.8e-18  Score=124.99  Aligned_cols=79  Identities=35%  Similarity=0.586  Sum_probs=71.7

Q ss_pred             eEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec---------ceEeeEEEEEEECCCCCccCCeeEEEeC
Q 026451           29 GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD---------NRYIMRFEQMFPLPPNSDMDKISGKFDG   99 (238)
Q Consensus        29 di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e---------~~~~r~F~r~~~LP~~vD~~~I~A~~~d   99 (238)
                      ++.++++.|+|.++||||++++|+|++. ++.|.|+|++....         ....+.|.|+|.||.++|.+.++|.|.|
T Consensus         1 ~i~e~~~~~~i~~~lpg~~~~~i~V~v~-~~~l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~~~   79 (88)
T cd06464           1 DVYETDDAYVVEADLPGFKKEDIKVEVE-DGVLTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASLEN   79 (88)
T ss_pred             CcEEcCCEEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcEEEEeC
Confidence            5788999999999999999999999999 99999999887542         1234699999999999999999999999


Q ss_pred             CEEEEEEeC
Q 026451          100 ELLYVTVPK  108 (238)
Q Consensus       100 GvL~ItlPK  108 (238)
                      |+|+|++||
T Consensus        80 G~L~I~~pk   88 (88)
T cd06464          80 GVLTITLPK   88 (88)
T ss_pred             CEEEEEEcC
Confidence            999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=99.74  E-value=1.2e-17  Score=127.57  Aligned_cols=74  Identities=27%  Similarity=0.417  Sum_probs=66.3

Q ss_pred             cCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec------ceEeeEEEEEEECCCCCccCCeeEEEeC-CEEEEE
Q 026451           33 DSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD------NRYIMRFEQMFPLPPNSDMDKISGKFDG-ELLYVT  105 (238)
Q Consensus        33 ~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e------~~~~r~F~r~~~LP~~vD~~~I~A~~~d-GvL~It  105 (238)
                      +++.|+|.++||||++++|+|+|. ++.|+|+|++...+      .+..+.|.|+|.||.+||.++|+|+|+| |+|+|.
T Consensus         6 ~~~~~~v~adlPG~~kedI~V~v~-~~~L~I~ger~~~~e~~~~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~l~i~   84 (87)
T cd06482           6 DSSNVLASVDVCGFEPDQVKVKVK-DGKVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVDEKDVTYSYGLGSVVKIE   84 (87)
T ss_pred             cCCEEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEecccccCCccEEEEEEEEEEEECCCCcChHHcEEEEcCCCEEEEe
Confidence            688999999999999999999999 99999999886431      2455799999999999999999999995 599999


Q ss_pred             Ee
Q 026451          106 VP  107 (238)
Q Consensus       106 lP  107 (238)
                      .|
T Consensus        85 ~~   86 (87)
T cd06482          85 TP   86 (87)
T ss_pred             eC
Confidence            87

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=99.73  E-value=1.7e-17  Score=127.69  Aligned_cols=82  Identities=22%  Similarity=0.358  Sum_probs=72.4

Q ss_pred             cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEEe-CCE
Q 026451           26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKFD-GEL  101 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~~-dGv  101 (238)
                      |.--+..+++.|.|.+|+.||+||||+|++. ++.|+|+|++...   .+.+.+.|.|+|.||++||.+.|+|.|. ||+
T Consensus         6 ~~~~~~~~~~~f~v~ldv~gF~pEDL~Vkv~-~~~L~V~Gkh~~~~~e~g~~~r~F~R~~~LP~~Vd~~~v~s~l~~dGv   84 (91)
T cd06480           6 PRNPPPNSSEPWKVCVNVHSFKPEELTVKTK-DGFVEVSGKHEEQQKEGGIVSKNFTKKIQLPPEVDPVTVFASLSPEGL   84 (91)
T ss_pred             ccCCCCCCCCcEEEEEEeCCCCHHHcEEEEE-CCEEEEEEEECcccCCCCEEEEEEEEEEECCCCCCchhEEEEeCCCCe
Confidence            3444567889999999999999999999999 9999999987654   2455689999999999999999999999 999


Q ss_pred             EEEEEeC
Q 026451          102 LYVTVPK  108 (238)
Q Consensus       102 L~ItlPK  108 (238)
                      |+|.+|.
T Consensus        85 L~IeaP~   91 (91)
T cd06480          85 LIIEAPQ   91 (91)
T ss_pred             EEEEcCC
Confidence            9999983

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>KOG3591 consensus Alpha crystallins [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=3.9e-16  Score=132.88  Aligned_cols=88  Identities=19%  Similarity=0.354  Sum_probs=79.2

Q ss_pred             cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEEe-CCE
Q 026451           26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKFD-GEL  101 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~~-dGv  101 (238)
                      ...++..++++|.|.+||..|+|++|+|++. |+.|.|+|+....   ++...|+|.|+|.||++||++.|+++|+ ||+
T Consensus        63 ~~~~~~~~~~~F~V~lDV~~F~PeEl~Vk~~-~~~l~V~gkHeer~d~~G~v~R~F~R~y~LP~~vdp~~V~S~LS~dGv  141 (173)
T KOG3591|consen   63 GASEIVNDKDKFEVNLDVHQFKPEELKVKTD-DNTLEVEGKHEEKEDEHGYVSRSFVRKYLLPEDVDPTSVTSTLSSDGV  141 (173)
T ss_pred             cccccccCCCcEEEEEEcccCcccceEEEeC-CCEEEEEeeeccccCCCCeEEEEEEEEecCCCCCChhheEEeeCCCce
Confidence            3567889999999999999999999999999 9999999976554   4667789999999999999999999998 999


Q ss_pred             EEEEEeCcCCccC
Q 026451          102 LYVTVPKRAKEES  114 (238)
Q Consensus       102 L~ItlPK~~~~~~  114 (238)
                      |+|.+||.+..+.
T Consensus       142 LtI~ap~~~~~~~  154 (173)
T KOG3591|consen  142 LTIEAPKPPPKQD  154 (173)
T ss_pred             EEEEccCCCCcCc
Confidence            9999999987654

>KOG0710 consensus Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification, protein turnover, chaperones]

Probab=99.45  E-value=1e-13  Score=120.03  Aligned_cols=95  Identities=32%  Similarity=0.458  Sum_probs=82.1

Q ss_pred             CCccccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec--------c----eEeeEEEEEEECCC
Q 026451           19 PIVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD--------N----RYIMRFEQMFPLPP   86 (238)
Q Consensus        19 ~~~~~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e--------~----~~~r~F~r~~~LP~   86 (238)
                      .....+.+++++.+..+.|.+.++|||+++++|+|.+.++++|+|+|++....        +    +..+.|.++|.||+
T Consensus        78 ~~~~~~~~~~~v~e~~~~~~~~~~~Pgl~ke~iKv~~~~~~~l~isGe~~~e~e~~~~~~~~~~~E~~~g~F~r~~~lPe  157 (196)
T KOG0710|consen   78 EAKSEARVPWDVKESPDAHEFKVDLPGLKKEDIKVEVEDEKVLTISGERKKEEEESGSGKKWKRVERKLGKFKRRFELPE  157 (196)
T ss_pred             cccccccCCcccccCCCceEEEeeCCCCCchhceEEeccCcEEEEecccccccccccCCccceeehhcccceEeeecCCc
Confidence            45566778899999999999999999999999999999444899999876542        1    12358999999999


Q ss_pred             CCccCCeeEEEeCCEEEEEEeCcCCcc
Q 026451           87 NSDMDKISGKFDGELLYVTVPKRAKEE  113 (238)
Q Consensus        87 ~vD~~~I~A~~~dGvL~ItlPK~~~~~  113 (238)
                      +++.+.|+|.|.||||+|++||..+..
T Consensus       158 nv~~d~ikA~~~nGVL~VvvpK~~~~~  184 (196)
T KOG0710|consen  158 NVDVDEIKAEMENGVLTVVVPKLEPLL  184 (196)
T ss_pred             cccHHHHHHHhhCCeEEEEEecccccc
Confidence            999999999999999999999997753

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=99.45  E-value=9e-13  Score=93.30  Aligned_cols=78  Identities=32%  Similarity=0.588  Sum_probs=69.9

Q ss_pred             EEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec--ceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEe
Q 026451           30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD--NRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVP  107 (238)
Q Consensus        30 i~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e--~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlP  107 (238)
                      |.++++.|.|.++|||+.+++|.|.+. ++.|.|+|......  ....+.|.+.|.||..+|++.++|+|.+|+|.|.+|
T Consensus         1 ~~q~~~~v~i~i~~~~~~~~~i~v~~~-~~~l~v~~~~~~~~~~~~~~~~~~~~~~L~~~i~~~~~~~~~~~~~l~i~l~   79 (80)
T cd00298           1 WYQTDDEVVVTVDLPGVKKEDIKVEVE-DNVLTISGKREEEEERERSYGEFERSFELPEDVDPEKSKASLENGVLEITLP   79 (80)
T ss_pred             CEEcCCEEEEEEECCCCCHHHeEEEEE-CCEEEEEEEEcCCCcceEeeeeEEEEEECCCCcCHHHCEEEEECCEEEEEEc
Confidence            578899999999999999999999999 99999999876542  222358999999999999999999999999999999


Q ss_pred             C
Q 026451          108 K  108 (238)
Q Consensus       108 K  108 (238)
                      |
T Consensus        80 K   80 (80)
T cd00298          80 K   80 (80)
T ss_pred             C
Confidence            7

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=99.21  E-value=9.3e-11  Score=85.74  Aligned_cols=71  Identities=20%  Similarity=0.240  Sum_probs=65.6

Q ss_pred             EEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451           30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR  109 (238)
Q Consensus        30 i~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~  109 (238)
                      |.++++.++|.+++||+++++++|.+. ++.|.|++          ..|.+.+.||..+|+++.++++.+|.|.|+|||.
T Consensus         1 W~Qt~~~v~i~i~~p~v~~~~v~v~~~-~~~l~i~~----------~~~~~~~~l~~~I~~e~~~~~~~~~~l~i~L~K~   69 (78)
T cd06469           1 WSQTDEDVKISVPLKGVKTSKVDIFCS-DLYLKVNF----------PPYLFELDLAAPIDDEKSSAKIGNGVLVFTLVKK   69 (78)
T ss_pred             CcccCCEEEEEEEeCCCccccceEEEe-cCEEEEcC----------CCEEEEEeCcccccccccEEEEeCCEEEEEEEeC
Confidence            578999999999999999999999999 89999987          1588999999999999999999999999999997


Q ss_pred             CC
Q 026451          110 AK  111 (238)
Q Consensus       110 ~~  111 (238)
                      .+
T Consensus        70 ~~   71 (78)
T cd06469          70 EP   71 (78)
T ss_pred             CC
Confidence            54

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=98.86  E-value=2.1e-08  Score=72.60  Aligned_cols=76  Identities=17%  Similarity=0.153  Sum_probs=67.5

Q ss_pred             EEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451           30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR  109 (238)
Q Consensus        30 i~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~  109 (238)
                      |.++++.+.|.+.+||..++++.|.+. ++.|+|++....     ...|...+.|+..+|++..++++.+|.|.|+|+|.
T Consensus         1 W~Q~~~~v~i~v~~~~~~~~~~~v~~~-~~~l~i~~~~~~-----~~~~~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~   74 (84)
T cd06463           1 WYQTLDEVTITIPLKDVTKKDVKVEFT-PKSLTVSVKGGG-----GKEYLLEGELFGPIDPEESKWTVEDRKIEITLKKK   74 (84)
T ss_pred             CcccccEEEEEEEcCCCCccceEEEEe-cCEEEEEeeCCC-----CCceEEeeEccCccchhhcEEEEeCCEEEEEEEEC
Confidence            578899999999999999999999999 899999986531     13678888999999999999999999999999998


Q ss_pred             CC
Q 026451          110 AK  111 (238)
Q Consensus       110 ~~  111 (238)
                      .+
T Consensus        75 ~~   76 (84)
T cd06463          75 EP   76 (84)
T ss_pred             CC
Confidence            65

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis []

Probab=98.68  E-value=1.5e-07  Score=80.49  Aligned_cols=79  Identities=18%  Similarity=0.330  Sum_probs=63.7

Q ss_pred             ccccceeEEEcCC-eEEEEEEcCCCCCCC-eEEEEE-eCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeC
Q 026451           23 EFVPSSGWTEDSN-GHYLLVDLPDFKKEQ-VKLQVD-SSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDG   99 (238)
Q Consensus        23 ~~~P~~di~e~~d-~~~l~vdLPGf~~ed-I~V~V~-~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~d   99 (238)
                      ...+.+++.+.+| .+.|.++|||++.++ |+|.+. ..+.|+|+  ..       ..|.+++.||.. +++.++++|.|
T Consensus        89 ~~~~~vdtre~dDge~~VvAdLPGVs~dd~idV~l~~d~~~L~i~--~~-------~~~~krv~L~~~-~~e~~~~t~nN  158 (177)
T PF05455_consen   89 EESIHVDTRERDDGELVVVADLPGVSDDDAIDVTLDDDEGALTIR--VG-------EKYLKRVALPWP-DPEITSATFNN  158 (177)
T ss_pred             cceeeeeeEecCCCcEEEEEeCCCCCcccceeeEeecCCceEEEe--cC-------CceEeeEecCCC-ccceeeEEEeC
Confidence            3467899999888 588999999999988 999998 34455553  21       247789999966 68889999999


Q ss_pred             CEEEEEEeCcCC
Q 026451          100 ELLYVTVPKRAK  111 (238)
Q Consensus       100 GvL~ItlPK~~~  111 (238)
                      |||.|.|-+...
T Consensus       159 gILEIri~~~~~  170 (177)
T PF05455_consen  159 GILEIRIRRTEE  170 (177)
T ss_pred             ceEEEEEeecCC
Confidence            999999988754

>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

Probab=98.58  E-value=3e-07  Score=67.78  Aligned_cols=77  Identities=14%  Similarity=0.142  Sum_probs=67.8

Q ss_pred             eEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeC
Q 026451           29 GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPK  108 (238)
Q Consensus        29 di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK  108 (238)
                      ||+++++.+.|.+.+||+.++++.|.+. ++.|.|++....     ...|...+.|+..++++..++++.+|.|.|+|.|
T Consensus         1 dW~Qt~~~v~i~v~~~~~~~~~v~v~~~-~~~l~i~~~~~~-----~~~~~~~~~L~~~I~~~~s~~~~~~~~vei~L~K   74 (84)
T cd06466           1 DWYQTDTSVTVTIYAKNVDKEDVKVEFN-EQSLSVSIILPG-----GSEYQLELDLFGPIDPEQSKVSVLPTKVEITLKK   74 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEEe-cCEEEEEEECCC-----CCeEEEecccccccCchhcEEEEeCeEEEEEEEc
Confidence            6899999999999999999999999999 899999876431     1257788899999999999999999999999999


Q ss_pred             cCC
Q 026451          109 RAK  111 (238)
Q Consensus       109 ~~~  111 (238)
                      ..+
T Consensus        75 ~~~   77 (84)
T cd06466          75 AEP   77 (84)
T ss_pred             CCC
Confidence            754

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug

>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown

Probab=98.46  E-value=3.7e-06  Score=60.40  Aligned_cols=77  Identities=18%  Similarity=0.202  Sum_probs=65.4

Q ss_pred             cceeEEEcCCeEEEEEEcCCC--CCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEE
Q 026451           26 PSSGWTEDSNGHYLLVDLPDF--KKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLY  103 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf--~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~  103 (238)
                      |+|+|.++++...|.+.+++.  +++++.|.+. ++.|.|+......     ..|...+.|...++++..+.++.++.|.
T Consensus         1 ~~y~W~Qt~~~V~v~i~~~~~~~~~~dv~v~~~-~~~l~v~~~~~~~-----~~~~~~~~L~~~I~~~~s~~~~~~~~i~   74 (79)
T PF04969_consen    1 PRYDWYQTDDEVTVTIPVKPVDISKEDVKVDFT-DTSLSVSIKSGDG-----KEYLLEGELFGEIDPDESTWKVKDNKIE   74 (79)
T ss_dssp             SSEEEEEESSEEEEEEE-TTTTSSGGGEEEEEE-TTEEEEEEEETTS-----CEEEEEEEBSS-BECCCEEEEEETTEEE
T ss_pred             CCeEEEECCCEEEEEEEEcCCCCChHHeEEEEE-eeEEEEEEEccCC-----ceEEEEEEEeeeEcchhcEEEEECCEEE
Confidence            789999999999999999665  5999999999 9999998654332     2677888899999999999999999999


Q ss_pred             EEEeC
Q 026451          104 VTVPK  108 (238)
Q Consensus       104 ItlPK  108 (238)
                      |+|.|
T Consensus        75 i~L~K   79 (79)
T PF04969_consen   75 ITLKK   79 (79)
T ss_dssp             EEEEB
T ss_pred             EEEEC
Confidence            99986

The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....

>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins

Probab=98.01  E-value=8.9e-05  Score=57.84  Aligned_cols=78  Identities=18%  Similarity=0.336  Sum_probs=67.3

Q ss_pred             cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEE
Q 026451           26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVT  105 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~It  105 (238)
                      |+++|+++.+..+|.+.+||.  +++.|.+. ...|.|++..... +   ..|...+.|...|+++.-+.++.++.|.|+
T Consensus         1 p~~~W~Qt~~~V~i~i~~~~~--~~~~V~~~-~~~l~v~~~~~~~-~---~~y~~~~~L~~~I~pe~s~~~v~~~kveI~   73 (108)
T cd06465           1 PPVLWAQRSDVVYLTIELPDA--KDPKIKLE-PTSLSFKAKGGGG-G---KKYEFDLEFYKEIDPEESKYKVTGRQIEFV   73 (108)
T ss_pred             CceeeeECCCEEEEEEEeCCC--CCcEEEEE-CCEEEEEEEcCCC-C---eeEEEEeEhhhhccccccEEEecCCeEEEE
Confidence            689999999999999999998  88999999 9999998854221 1   246777799999999999999999999999


Q ss_pred             EeCcC
Q 026451          106 VPKRA  110 (238)
Q Consensus       106 lPK~~  110 (238)
                      |.|..
T Consensus        74 L~K~~   78 (108)
T cd06465          74 LRKKE   78 (108)
T ss_pred             EEECC
Confidence            99976

hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.

>PF08190 PIH1: pre-RNA processing PIH1/Nop17

Probab=97.81  E-value=8.9e-05  Score=67.54  Aligned_cols=65  Identities=26%  Similarity=0.450  Sum_probs=58.0

Q ss_pred             CCeEEEEEEcCCC-CCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEe--CCEEEEEEe
Q 026451           34 SNGHYLLVDLPDF-KKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFD--GELLYVTVP  107 (238)
Q Consensus        34 ~d~~~l~vdLPGf-~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~--dGvL~ItlP  107 (238)
                      .+.+.|.|.|||+ +..+|.|.|. +..|.|.....        .|...+.||..||.+..+|+|.  .++|+||||
T Consensus       260 p~~lvv~i~LP~~~s~~~i~LdV~-~~~l~l~~~~~--------~y~L~l~LP~~V~~~~~~Akf~~~~~~L~vtlp  327 (328)
T PF08190_consen  260 PEELVVEIELPGVESASDIDLDVS-EDRLSLSSPKP--------KYRLDLPLPYPVDEDNGKAKFDKKTKTLTVTLP  327 (328)
T ss_pred             CceEEEEEECCCcCccceeEEEEe-CCEEEEEeCCC--------ceEEEccCCCcccCCCceEEEccCCCEEEEEEE
Confidence            5788899999999 8899999999 99999976542        5778899999999999999997  599999998

>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins

Probab=97.73  E-value=0.00026  Score=52.23  Aligned_cols=75  Identities=20%  Similarity=0.271  Sum_probs=62.3

Q ss_pred             eeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeC-CEEEEE
Q 026451           28 SGWTEDSNGHYLLVDLP-DFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDG-ELLYVT  105 (238)
Q Consensus        28 ~di~e~~d~~~l~vdLP-Gf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~d-GvL~It  105 (238)
                      |.|.++++...|.+.+| ++.+++|.|.+. .+.|.|+...    .    .+.-...|...+|++....++.+ ..|.|+
T Consensus         1 y~W~Qt~~~V~i~i~~~~~~~~~dv~v~~~-~~~l~v~~~~----~----~~~l~~~L~~~I~~~~s~w~~~~~~~v~i~   71 (85)
T cd06467           1 YSWTQTLDEVTVTIPLPEGTKSKDVKVEIT-PKHLKVGVKG----G----EPLLDGELYAKVKVDESTWTLEDGKLLEIT   71 (85)
T ss_pred             CEEEeeCCEEEEEEECCCCCcceeEEEEEE-cCEEEEEECC----C----CceEcCcccCceeEcCCEEEEeCCCEEEEE
Confidence            57999999999999997 799999999999 8999998642    1    12223368889999998888999 999999


Q ss_pred             EeCcCC
Q 026451          106 VPKRAK  111 (238)
Q Consensus       106 lPK~~~  111 (238)
                      |+|..+
T Consensus        72 L~K~~~   77 (85)
T cd06467          72 LEKRNE   77 (85)
T ss_pred             EEECCC
Confidence            999854

Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext

>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins

Probab=97.70  E-value=0.00032  Score=52.15  Aligned_cols=76  Identities=11%  Similarity=0.173  Sum_probs=64.6

Q ss_pred             eEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeC
Q 026451           29 GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPK  108 (238)
Q Consensus        29 di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK  108 (238)
                      ||+++++...|.+.++|+.++++.|.+. ++.|.|++....  +   ..|.-.+.|...+++++-+.+...+-+.|+|.|
T Consensus         1 dW~Q~~~~V~iti~~k~~~~~~~~v~~~-~~~l~~~~~~~~--~---~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K   74 (84)
T cd06489           1 DWYQTESQVVITILIKNVKPEDVSVEFE-KRELSATVKLPS--G---NDYSLKLHLLHPIVPEQSSYKILSTKIEIKLKK   74 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEEe-CCEEEEEEECCC--C---CcEEEeeecCceecchhcEEEEeCcEEEEEEEc
Confidence            6899999999999999999999999999 899999876422  1   136667789999999987777888889999999


Q ss_pred             cC
Q 026451          109 RA  110 (238)
Q Consensus       109 ~~  110 (238)
                      ..
T Consensus        75 ~~   76 (84)
T cd06489          75 TE   76 (84)
T ss_pred             CC
Confidence            74

hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.

>cd06488 p23_melusin_like p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins

Probab=97.59  E-value=0.00085  Score=50.55  Aligned_cols=79  Identities=14%  Similarity=0.074  Sum_probs=66.7

Q ss_pred             ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEE
Q 026451           27 SSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTV  106 (238)
Q Consensus        27 ~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~Itl  106 (238)
                      ++||+++++...|.+.+.|..++++.|.+. .+.|+|+..-..     ...|...+.|-..+|++..+.+....-+.|+|
T Consensus         2 R~dW~Qs~~~V~ItI~~k~~~~~~~~v~~~-~~~l~v~~~~~~-----~~~y~~~l~L~~~I~~~~s~~~v~~~kvei~L   75 (87)
T cd06488           2 RHDWHQTGSHVVVSVYAKNSNPELSVVEAN-STVLTIHIVFEG-----NKEFQLDIELWGVIDVEKSSVNMLPTKVEIKL   75 (87)
T ss_pred             CccEeeCCCEEEEEEEECcCCccceEEEec-CCEEEEEEECCC-----CceEEEEeeccceEChhHcEEEecCcEEEEEE
Confidence            589999999999999999999999999998 888888654322     12477778999999999977777789999999


Q ss_pred             eCcCC
Q 026451          107 PKRAK  111 (238)
Q Consensus       107 PK~~~  111 (238)
                      .|..+
T Consensus        76 ~K~~~   80 (87)
T cd06488          76 RKAEP   80 (87)
T ss_pred             EeCCC
Confidence            99854

Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (C

>cd06468 p23_CacyBP p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP)

Probab=97.53  E-value=0.0013  Score=49.33  Aligned_cols=79  Identities=14%  Similarity=0.250  Sum_probs=65.3

Q ss_pred             ceeEEEcCCeEEEEEEcCCCCC---CCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEE-CCCCCccCCeeEEEeCCEE
Q 026451           27 SSGWTEDSNGHYLLVDLPDFKK---EQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFP-LPPNSDMDKISGKFDGELL  102 (238)
Q Consensus        27 ~~di~e~~d~~~l~vdLPGf~~---edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~-LP~~vD~~~I~A~~~dGvL  102 (238)
                      .|+|.++++...|.+.+|+..+   +++.|.+. .+.|.|++...  ++   ..|.-.+. |-..++++..+.++.++-+
T Consensus         3 ~y~W~Qt~~~V~i~i~~~~~~~~~~~~v~v~~~-~~~l~v~~~~~--~~---~~~~~~~~~L~~~I~~e~s~~~~~~~ki   76 (92)
T cd06468           3 KYAWDQSDKFVKIYITLKGVHQLPKENIQVEFT-ERSFELKVHDL--NG---KNYRFTINRLLKKIDPEKSSFKVKTDRI   76 (92)
T ss_pred             eeeeecCCCEEEEEEEccCCCcCCcccEEEEec-CCEEEEEEECC--CC---cEEEEEehHhhCccCccccEEEEeCCEE
Confidence            5899999999999999999987   99999999 89999987321  11   13555554 8899999998888889999


Q ss_pred             EEEEeCcCC
Q 026451          103 YVTVPKRAK  111 (238)
Q Consensus       103 ~ItlPK~~~  111 (238)
                      .|+|.|..+
T Consensus        77 ~i~L~K~~~   85 (92)
T cd06468          77 VITLAKKKE   85 (92)
T ss_pred             EEEEEeCCC
Confidence            999999864

CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes

>cd06493 p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear distribution) C-like domain found in human NUD (nuclear distribution) C domain-containing protein 1, NUDCD1 (also known as CML66), and similar proteins

Probab=97.46  E-value=0.0015  Score=48.95  Aligned_cols=75  Identities=17%  Similarity=0.239  Sum_probs=60.7

Q ss_pred             eeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC-EEEEE
Q 026451           28 SGWTEDSNGHYLLVDLP-DFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE-LLYVT  105 (238)
Q Consensus        28 ~di~e~~d~~~l~vdLP-Gf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG-vL~It  105 (238)
                      |+|+++.+...|.+.+| |+.+++++|++. .+.|.|...  . +.    .| ..-.|...++++.-+-++.+| .|.|+
T Consensus         1 Y~W~Qt~~~V~v~i~~p~~~~~~dv~v~~~-~~~l~v~~~--~-~~----~~-~~g~L~~~I~~d~Stw~i~~~~~l~i~   71 (85)
T cd06493           1 YYWQQTEEDLTLTIRLPEDTTKEDIRIKFL-PDHISIALK--D-QA----PL-LEGKLYSSIDHESSTWIIKENKSLEVS   71 (85)
T ss_pred             CccEEeCCEEEEEEECCCCCChhhEEEEEe-cCEEEEEeC--C-CC----eE-EeCcccCcccccCcEEEEeCCCEEEEE
Confidence            67999999999999996 999999999999 899998652  1 11    12 234788999999988778766 79999


Q ss_pred             EeCcCC
Q 026451          106 VPKRAK  111 (238)
Q Consensus       106 lPK~~~  111 (238)
                      |.|..+
T Consensus        72 L~K~~~   77 (85)
T cd06493          72 LIKKDE   77 (85)
T ss_pred             EEECCC
Confidence            999754

NUDCD1/CML66 is a broadly immunogenic tumor associated antigen, which is highly expressed in a variety of solid tumors and in leukemias. In normal tissues high expression of NUDCD1/CML66 is limited to testis and heart.

>cd06494 p23_NUDCD2_like p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins

Probab=97.02  E-value=0.0069  Score=46.71  Aligned_cols=77  Identities=16%  Similarity=0.300  Sum_probs=62.5

Q ss_pred             ccceeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC-EE
Q 026451           25 VPSSGWTEDSNGHYLLVDLP-DFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE-LL  102 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLP-Gf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG-vL  102 (238)
                      .+.|.|+++.+...|.+.|| |.++.++.|.+. .+.|.|.-..     ..  -+..  .|...|+++.-.-++++| +|
T Consensus         5 ~~~y~W~QT~~eV~v~i~lp~~~~~kdv~V~i~-~~~l~V~~~g-----~~--~l~G--~L~~~I~~destWtled~k~l   74 (93)
T cd06494           5 TPWGCWYQTMDEVFIEVNVPPGTRAKDVKCKLG-SRDISLAVKG-----QE--VLKG--KLFDSVVADECTWTLEDRKLI   74 (93)
T ss_pred             CCCcEEEeEcCEEEEEEECCCCCceeeEEEEEE-cCEEEEEECC-----EE--EEcC--cccCccCcccCEEEEECCcEE
Confidence            47899999999999999997 899999999999 8999987411     10  1111  688899999988999876 58


Q ss_pred             EEEEeCcCC
Q 026451          103 YVTVPKRAK  111 (238)
Q Consensus       103 ~ItlPK~~~  111 (238)
                      .|.|.|...
T Consensus        75 ~I~L~K~~~   83 (93)
T cd06494          75 RIVLTKSNR   83 (93)
T ss_pred             EEEEEeCCC
Confidence            999999753

Little is known about the function of the proteins in this subgroup.

>cd00237 p23 p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor

Probab=96.97  E-value=0.015  Score=45.88  Aligned_cols=78  Identities=15%  Similarity=0.176  Sum_probs=62.4

Q ss_pred             cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEE
Q 026451           26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVT  105 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~It  105 (238)
                      |.++|.+..+..+|++.||+  .++++|++. .+.|.++|...  ++.   .|.-.+.|-..+++++-+.+...--+.|.
T Consensus         2 p~v~WaQr~~~V~ltI~v~d--~~d~~v~l~-~~~l~f~~~~~--~g~---~y~~~l~l~~~I~pe~Sk~~v~~r~ve~~   73 (106)
T cd00237           2 AKTLWYDRRDYVFIEFCVED--SKDVKVDFE-KSKLTFSCLNG--DNV---KIYNEIELYDRVDPNDSKHKRTDRSILCC   73 (106)
T ss_pred             CcceeeECCCEEEEEEEeCC--CCCcEEEEe-cCEEEEEEECC--CCc---EEEEEEEeecccCcccCeEEeCCceEEEE
Confidence            78999999999999999999  689999999 88999998332  221   35567788888999986655556678888


Q ss_pred             EeCcCC
Q 026451          106 VPKRAK  111 (238)
Q Consensus       106 lPK~~~  111 (238)
                      |.|...
T Consensus        74 L~K~~~   79 (106)
T cd00237          74 LRKGKE   79 (106)
T ss_pred             EEeCCC
Confidence            998854

p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional

Probab=96.21  E-value=0.027  Score=52.66  Aligned_cols=81  Identities=11%  Similarity=-0.013  Sum_probs=67.1

Q ss_pred             ccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEE
Q 026451           25 VPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYV  104 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~I  104 (238)
                      .+++||+++++...|.|.+.|+.++++.|.+. .+.|.|+-....  +   ..|...+.|-..|+++..+.++..--+.|
T Consensus       156 ~~r~dWyQs~~~V~i~i~~k~~~~~~~~v~~~-~~~l~v~~~~~~--~---~~y~~~~~L~~~I~p~~s~~~v~~~Kiei  229 (356)
T PLN03088        156 KYRHEFYQKPEEVVVTVFAKGVPAENVNVDFG-EQILSVVIEVPG--E---DAYHLQPRLFGKIIPDKCKYEVLSTKIEI  229 (356)
T ss_pred             ccccceeecCCEEEEEEEecCCChHHcEEEee-cCEEEEEEecCC--C---cceeecccccccccccccEEEEecceEEE
Confidence            36899999999999999999999999999999 888988864322  2   13555678999999999887777779999


Q ss_pred             EEeCcCC
Q 026451          105 TVPKRAK  111 (238)
Q Consensus       105 tlPK~~~  111 (238)
                      +|.|..+
T Consensus       230 ~l~K~~~  236 (356)
T PLN03088        230 RLAKAEP  236 (356)
T ss_pred             EEecCCC
Confidence            9988753

>cd06490 p23_NCB5OR p23_like domain found in NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR) and similar proteins

Probab=95.38  E-value=0.29  Score=36.87  Aligned_cols=77  Identities=9%  Similarity=0.069  Sum_probs=55.9

Q ss_pred             eeEEEcCCeEEEEEEcCCCCCCCeEEEEE-eCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEe--CCEEEE
Q 026451           28 SGWTEDSNGHYLLVDLPDFKKEQVKLQVD-SSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFD--GELLYV  104 (238)
Q Consensus        28 ~di~e~~d~~~l~vdLPGf~~edI~V~V~-~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~--dGvL~I  104 (238)
                      +||+++++...|.+...+....+..|.+. ..+.|.|+-.-.   +   ..|...|.|-..++.+. +.++.  -|-+.|
T Consensus         1 ~DWyQt~~~Vtitiy~K~~~~~~~~v~v~~~~~~l~v~~~~~---~---~~~~~~~~L~~~I~~~~-~~~~~~~~~KVEI   73 (87)
T cd06490           1 YDWFQTDSEVTIVVYTKSKGNPADIVIVDDQQRELRVEIILG---D---KSYLLHLDLSNEVQWPC-EVRISTETGKIEL   73 (87)
T ss_pred             CCceECCCEEEEEEEEcccCCCCccEEEECCCCEEEEEEECC---C---ceEEEeeeccccCCCCc-EEEEcccCceEEE
Confidence            58999999999999998655555454443 266788864332   1   14777778888888775 56665  789999


Q ss_pred             EEeCcCC
Q 026451          105 TVPKRAK  111 (238)
Q Consensus       105 tlPK~~~  111 (238)
                      +|.|..+
T Consensus        74 ~L~K~e~   80 (87)
T cd06490          74 VLKKKEP   80 (87)
T ss_pred             EEEcCCC
Confidence            9999754

NCB5OR is widely expressed in human organs and tissues and is localized in the ER (endoplasmic reticulum). It appears to play a critical role in maintaining viable pancreatic beta cells. Mice homozygous for a targeted knockout (KO) of the gene encoding NCB5OR develop an early-onset nonautoimmune diabetes phenotype with a non-inflammatory beta-cell deficiency. The role of NCB5OR in beta cells may be in maintaining or regulating their redox status. Proteins in this group in addition contain an N-terminal cytochrome b5 domain and a C-terminal cytochrome b5 oxidoreductase domain. The gene encoding NCB5OR has been considered as a positional candidate for type II diabetes and other diabetes subtypes related to B-cell dysfunction, however variation in its coding region does not appear not to be a major contributor to the pathogenesis of these diseases.

>cd06492 p23_mNUDC_like p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins

Probab=95.15  E-value=0.24  Score=37.47  Aligned_cols=75  Identities=16%  Similarity=0.109  Sum_probs=58.0

Q ss_pred             eeEEEcCCeEEEEEEcC-C--CCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC-EEE
Q 026451           28 SGWTEDSNGHYLLVDLP-D--FKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE-LLY  103 (238)
Q Consensus        28 ~di~e~~d~~~l~vdLP-G--f~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG-vL~  103 (238)
                      |-|.++.+...|.+.|| +  +++.+|+|++. ...|.|.-...        ...-.=.|...|+.+.-.-++++| .|.
T Consensus         1 Y~W~QT~~ev~v~v~l~~~~~~~~kdv~v~i~-~~~l~v~~~g~--------~~~i~G~L~~~V~~des~Wtled~~~l~   71 (87)
T cd06492           1 YRWTQTLSEVELKVPFKVSFRLKGKDVVVDIQ-RKHLKVGLKGQ--------PPIIDGELYNEVKVEESSWLIEDGKVVT   71 (87)
T ss_pred             CccEeecCEEEEEEECCCCCCccceEEEEEEe-cCEEEEEECCC--------ceEEeCcccCcccccccEEEEeCCCEEE
Confidence            46788999999999996 3  89999999999 88888854211        111222677889999988889886 899


Q ss_pred             EEEeCcCC
Q 026451          104 VTVPKRAK  111 (238)
Q Consensus       104 ItlPK~~~  111 (238)
                      |+|-|...
T Consensus        72 i~L~K~~~   79 (87)
T cd06492          72 VNLEKINK   79 (87)
T ss_pred             EEEEECCC
Confidence            99998753

Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its extracellular domain, and promoting cell proliferation and differentiation.

>KOG1309 consensus Suppressor of G2 allele of skp1 [Signal transduction mechanisms]

Probab=95.08  E-value=0.081  Score=45.85  Aligned_cols=80  Identities=13%  Similarity=0.166  Sum_probs=63.4

Q ss_pred             ccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEE
Q 026451           25 VPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYV  104 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~I  104 (238)
                      .+++||+++.+...|.+-.+++.++++.|.+. .+.|.|.-+....+     .|.....|-..|.+++.+-+.----+.|
T Consensus         3 k~r~DwyQt~~~vvIti~~k~v~~~~v~v~~s-~~~l~~~~~~~~g~-----~~~l~~~L~~~I~pe~~s~k~~stKVEI   76 (196)
T KOG1309|consen    3 KIRHDWYQTETSVVITIFAKNVPKEDVNVEIS-ENTLSIVIQLPSGS-----EYNLQLKLYHEIIPEKSSFKVFSTKVEI   76 (196)
T ss_pred             cccceeecCCceEEEEEEecCCCccceeEEee-cceEEEEEecCCch-----hhhhhHHhcccccccceeeEeeeeeEEE
Confidence            46899999999999999999999999999999 88888876554321     3444445777888888655555778999


Q ss_pred             EEeCcC
Q 026451          105 TVPKRA  110 (238)
Q Consensus       105 tlPK~~  110 (238)
                      +|+|..
T Consensus        77 ~L~K~~   82 (196)
T KOG1309|consen   77 TLAKAE   82 (196)
T ss_pred             Eecccc
Confidence            999953

>cd06495 p23_NUDCD3_like p23-like NUD (nuclear distribution) C-like domain found in human NUDC domain-containing protein 3 (NUDCD3) and similar proteins

Probab=94.76  E-value=0.39  Score=37.66  Aligned_cols=80  Identities=18%  Similarity=0.238  Sum_probs=61.0

Q ss_pred             ccceeEEEcCCeEEEEEEcC-C-CCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC-E
Q 026451           25 VPSSGWTEDSNGHYLLVDLP-D-FKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE-L  101 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLP-G-f~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG-v  101 (238)
                      .+.|.|.++-+...|.+.|| | .+..+|.|.+. ...|.|.-.....+.-+   +..  .|+..|+.+.-.-+++|| +
T Consensus         4 ~e~Y~WtQTl~eV~V~i~lp~~~~~~kdv~v~i~-~~~l~v~~~~~~~~~~~---i~G--~L~~~V~~des~Wtled~~~   77 (102)
T cd06495           4 RENYTWSQDYTDVEVRVPVPKDVVKGRQVSVDLQ-SSSIRVSVRDGGGEKVL---MEG--EFTHKINTENSLWSLEPGKC   77 (102)
T ss_pred             CCceEEEeECCeEEEEEECCCCCccceEEEEEEE-cCEEEEEEecCCCCceE---EeC--cccCcccCccceEEEeCCCE
Confidence            46799999999999999999 5 46889999999 88888875321100011   122  678889999988999985 5


Q ss_pred             EEEEEeCcC
Q 026451          102 LYVTVPKRA  110 (238)
Q Consensus       102 L~ItlPK~~  110 (238)
                      |.|+|-|..
T Consensus        78 l~I~L~K~~   86 (102)
T cd06495          78 VLLSLSKCS   86 (102)
T ss_pred             EEEEEEECC
Confidence            899999973

Little is known about the function of the proteins in this subgroup.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	238
3gt6_A	103	Crystal Structure Of The Hspa From Xanthomonas Axon		4e-04
3gla_A	100	Crystal Structure Of The Hspa From Xanthomonas Axon		6e-04

>pdb|3GT6|A Chain A, Crystal Structure Of The Hspa From Xanthomonas Axonopodis Length = 103

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 20  IVKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFE 79
           +  ++VP     E+ N   L  DLP     Q+++Q+D  G +++ GE  +  +    RF 
Sbjct: 2   VTAQWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMD-KGILSIRGERKSESSTETERFS 60
Query: 80  QM----------FPLPPNSDMDKISGKFDGELLYVTVPKR 109
           ++          F LP ++D D I+      +L + +PKR
Sbjct: 61  RIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKR 100

>pdb|3GLA|A Chain A, Crystal Structure Of The Hspa From Xanthomonas Axonopodis Length = 100

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 23  EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQM- 81
           ++VP     E+ N   L  DLP     Q+++Q+D  G +++ GE  +  +    RF ++ 
Sbjct: 2   QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIE 60
Query: 82  ---------FPLPPNSDMDKISGKFDGELLYVTVPKR 109
                    F LP ++D D I+      +L + +PKR
Sbjct: 61  RRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	238
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	6e-15
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	1e-12
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	3e-12
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	2e-10
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	7e-10
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	1e-09
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	2e-09
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	2e-09
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	1e-08
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	8e-04

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A Length = 100

 Score = 67.5 bits (166), Expect = 6e-15
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 23  EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEM----LTSDNRYIMR- 77
           ++VP     E+ N   L  DLP     Q+++Q+D  G +++ GE      T   R+    
Sbjct: 2   QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIE 60

Query: 78  -----FEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAK 111
                F + F LP ++D D I+      +L + +PKR  
Sbjct: 61  RRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKRPA 99

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A Length = 151

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 10/95 (10%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS----DNRYIMR------FE 79
           W E    H    DLP  KKE+VK++V+    + VSGE        ++++         F 
Sbjct: 48  WKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFV 107

Query: 80  QMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEES 114
           + F L  ++ ++++    +  +L VTVPK   ++ 
Sbjct: 108 RRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKP 142

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A Length = 123

 Score = 60.7 bits (148), Expect = 3e-12
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMR------FEQMFP 83
             E+     ++ DL  F KE++K +V     + +  E   ++              ++  
Sbjct: 29  MYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIR 88

Query: 84  LPPNSDMD-KISGKFDGELLYVTVPKRAKE 112
           LP N   D +ISGK++  +L + +P     
Sbjct: 89  LPYNVAKDAEISGKYENGVLTIRIPIAGTS 118

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A Length = 161

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 12/96 (12%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGE----MLTSDNRYIMR-------F 78
             E      ++  LP   KE + L       + +  +    M+T   R I          
Sbjct: 61  IIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEI 119

Query: 79  EQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEES 114
            +   LP     +  S KF+  +L V +PK      
Sbjct: 120 YRTIKLPATVKEENASAKFENGVLSVILPKAESSIK 155

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A Length = 85

 Score = 53.1 bits (128), Expect = 7e-10
 Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 29  GWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSG--EMLTSDNRYIMR-FEQMFPLP 85
           G +  ++   + +D+  F  +++ ++    G + ++G       ++ YI R F + + LP
Sbjct: 1   GGSHTADRWRVSLDVNHFAPDELTVKTK-DGVVEITGKHAARQDEHGYISRCFTRKYTLP 59

Query: 86  PNSDMDKISGKF--DGELLYVTVPK 108
           P  D  ++S     +G  L V  P 
Sbjct: 60  PGVDPTQVSSSLSPEG-TLTVEAPM 83

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus} Length = 101

 Score = 52.9 bits (127), Expect = 1e-09
 Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 31  TEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSG--EMLTSDNRYIMR-FEQMFPLPPN 87
             D     +L+D+  F  E++ ++V    ++ V    E    ++ +I R F + + LPP 
Sbjct: 7   PTDPGYFSVLLDVKHFSPEEISVKVV-GDHVEVHARHEERPDEHGFIAREFHRRYRLPPG 65

Query: 88  SDMDKISGKF--DGELLYVTVPKRAKEESTEQP 118
            D   ++     +G +L +     + + S   P
Sbjct: 66  VDPAAVTSALSPEG-VLSIQATPASAQASLPSP 97

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A Length = 175

 Score = 54.6 bits (131), Expect = 2e-09
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 15/111 (13%)

Query: 26  PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSG--EMLTSDNRYIMR-FEQMF 82
             S    + +   + +D+  F  E++K++V     I V G  E    ++ +I R F + +
Sbjct: 64  GLSEMRLEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKY 122

Query: 83  PLPPNSDMDKISGKF--DGELLYVTVPKRAKE--------ESTEQPSLPAS 123
            +P + D   I+     DG +L V  P++              E+P++ A+
Sbjct: 123 RIPADVDPLTITSSLSSDG-VLTVNGPRKQVSGPERTIPITREEKPAVTAA 172

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A Length = 90

 Score = 52.1 bits (125), Expect = 2e-09
 Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 7/88 (7%)

Query: 31  TEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSG--EMLTSDNRYIMR-FEQMFPLPPN 87
             + +   + +D+  F  E++K++V     I V G  E    ++ +I R F + + +P +
Sbjct: 2   AMEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPAD 60

Query: 88  SDMDKISGKF--DGELLYVTVPKRAKEE 113
            D   I+     DG +L V  P++    
Sbjct: 61  VDPLTITSSMSSDG-VLTVNGPRKQVSG 87

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A Length = 106

 Score = 50.2 bits (120), Expect = 1e-08
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 31  TEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSG--EMLTSDNRYIMR-FEQMFPLPPN 87
             D +   + +D+  F  E + ++V     + + G       D+ YI R F + + LP N
Sbjct: 8   RSDRDKFVIFLDVKHFSPEDLTVKVQ-EDFVEIHGKHNERQDDHGYISREFHRRYRLPSN 66

Query: 88  SDMDKISGKF--DGELLYVTVPKRAKEE 113
            D   +S     DG +L  + PK     
Sbjct: 67  VDQSALSCSLSADG-MLTFSGPKIPSGV 93

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} Length = 314

 Score = 38.7 bits (89), Expect = 8e-04
 Identities = 17/85 (20%), Positives = 25/85 (29%), Gaps = 7/85 (8%)

Query: 30  WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLT-----SDNRYIMR-FEQMFP 83
                  H  L   P F  + VK+       + V G         + +    R F + F 
Sbjct: 229 EDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEKTENASHSEHREFYKAFV 287

Query: 84  LPPNSDMDKISGKFDGELLYVTVPK 108
            P   D  K   +    L+ V  P 
Sbjct: 288 TPEVVDASKTQAEIVDGLMVVEAPL 312

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	238
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	99.9
4fei_A	102	Heat shock protein-related protein; stress respons	99.89
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	99.88
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	99.86
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	99.85
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	99.84
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	99.84
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	99.83
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	99.83
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	99.81
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.77
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.65
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	98.93
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	98.88
2k8q_A	134	Protein SHQ1; beta-sandwich, CS domain, nucleus, s	97.97
3eud_A	115	Protein SHQ1; CS domain HSP20-like domain SHQ1 H/A	97.95
1x5m_A	127	Calcyclin-binding protein; CS domain, structural g	97.9
1wh0_A	134	Ubiquitin carboxyl-terminal hydrolase 19; USP, CS	97.7
1wgv_A	124	KIAA1068 protein; CS domain, HSP20-like fold, stru	97.47
2o30_A	131	Nuclear movement protein; MCSG, structural genomic	97.41
3qor_A	121	Nuclear migration protein NUDC; beta-sandwich, cha	97.4
2rh0_A	157	NUDC domain-containing protein 2; 13542905, nuclea	97.33
1ejf_A	125	Progesterone receptor P23; chaperone, CO-chaperone	97.31
1wfi_A	131	Nuclear distribution gene C homolog; NUDC, riken s	97.27
3igf_A	374	ALL4481 protein; two-domained protein consisting o	97.1
2cg9_X	134	CO-chaperone protein SBA1; chaperone complex, HSP9	96.68
2kmw_A	150	Uncharacterized protein AT3G03773; protein structu	96.54

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=99.90  E-value=3.9e-23  Score=158.05  Aligned_cols=88  Identities=30%  Similarity=0.522  Sum_probs=78.8

Q ss_pred             ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec----ce------EeeEEEEEEECCCCCccCC
Q 026451           23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----NR------YIMRFEQMFPLPPNSDMDK   92 (238)
Q Consensus        23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e----~~------~~r~F~r~~~LP~~vD~~~   92 (238)
                      .|.|++||+++++.|+|.++||||++++|+|++. ++.|+|+|++....    ..      ..+.|.|+|.||.++|.++
T Consensus         2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~   80 (100)
T 3gla_A            2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMD-KGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG   80 (100)
T ss_dssp             CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEE-TTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred             CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEE-CCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence            5899999999999999999999999999999999 99999999987541    11      2358999999999999999


Q ss_pred             eeEEEeCCEEEEEEeCcCC
Q 026451           93 ISGKFDGELLYVTVPKRAK  111 (238)
Q Consensus        93 I~A~~~dGvL~ItlPK~~~  111 (238)
                      |+|+|+||+|+|++||.+.
T Consensus        81 i~A~~~~GvL~I~~pK~~~   99 (100)
T 3gla_A           81 ITAAGRNGVLEIRIPKRPA   99 (100)
T ss_dssp             CEEEEETTEEEEEEEBC--
T ss_pred             eEEEEeCCEEEEEEecCCC
Confidence            9999999999999999854

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=99.89  E-value=6.2e-23  Score=158.23  Aligned_cols=90  Identities=24%  Similarity=0.388  Sum_probs=81.4

Q ss_pred             cccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec-----ceEeeEEEEEEECCCCCccCCeeEE
Q 026451           22 KEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD-----NRYIMRFEQMFPLPPNSDMDKISGK   96 (238)
Q Consensus        22 ~~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e-----~~~~r~F~r~~~LP~~vD~~~I~A~   96 (238)
                      ..|.|++||+++++.|+|.++||||++++|+|++. ++.|+|+|++..+.     .+..+.|.|+|.||.++|.++|+|+
T Consensus         3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~   81 (102)
T 4fei_A            3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAED-GGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVAS   81 (102)
T ss_dssp             EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEE-TTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEE
T ss_pred             CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEE-CCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEE
Confidence            46899999999999999999999999999999999 99999999986542     2234699999999999999999999


Q ss_pred             EeCCEEEEEEeCcCCc
Q 026451           97 FDGELLYVTVPKRAKE  112 (238)
Q Consensus        97 ~~dGvL~ItlPK~~~~  112 (238)
                      |+||+|+|++||..+.
T Consensus        82 ~~~GvL~I~lpK~~~~   97 (102)
T 4fei_A           82 LAGGVLTVRFEKLRPT   97 (102)
T ss_dssp             EETTEEEEEEEBSSCC
T ss_pred             EECCEEEEEEEccCcc
Confidence            9999999999998653

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=99.88  E-value=6.6e-22  Score=153.96  Aligned_cols=97  Identities=16%  Similarity=0.254  Sum_probs=81.8

Q ss_pred             cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEE-eCCE
Q 026451           26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKF-DGEL  101 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGv  101 (238)
                      +..||+++++.|.|.++||||++++|+|++. ++.|+|+|++...   .+.+.+.|.|+|.||.++|.++|+|+| .||+
T Consensus         3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~Gv   81 (106)
T 3l1e_A            3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQ-EDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGM   81 (106)
T ss_dssp             CSEEEEECSSEEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSE
T ss_pred             CceEEEEcCCEEEEEEECCCCChHHEEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCE
Confidence            4589999999999999999999999999999 9999999987543   233446899999999999999999999 7999


Q ss_pred             EEEEEeCcCCcc-CCCCCCCCcC
Q 026451          102 LYVTVPKRAKEE-STEQPSLPAS  123 (238)
Q Consensus       102 L~ItlPK~~~~~-~~~~p~~~~~  123 (238)
                      |+|++||..+.. ...+++.+++
T Consensus        82 L~I~~PK~~~~~~~~~~~r~I~I  104 (106)
T 3l1e_A           82 LTFSGPKIPSGVDAGHSERAIPV  104 (106)
T ss_dssp             EEEEEEBCCCCTTTTSSSCCCCC
T ss_pred             EEEEEEccCcccccCCCCeEeee
Confidence            999999997753 2234455543

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=99.86  E-value=1.2e-21  Score=151.12  Aligned_cols=87  Identities=16%  Similarity=0.294  Sum_probs=77.3

Q ss_pred             ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee--c-ceEeeEEEEEEECCCCCccCCeeEEE-eCCEE
Q 026451           27 SSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS--D-NRYIMRFEQMFPLPPNSDMDKISGKF-DGELL  102 (238)
Q Consensus        27 ~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~--e-~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL  102 (238)
                      .+||+++++.|.|.++||||++++|+|++. ++.|+|+|++...  + +.+.+.|.|+|.||.++|.++|+|+| .||+|
T Consensus         3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL   81 (101)
T 2wj5_A            3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVV-GDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL   81 (101)
T ss_dssp             CCCCCCCSSCEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred             cEEEEEeCCEEEEEEECCCCcHHHeEEEEE-CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence            579999999999999999999999999999 9999999998753  1 23345799999999999999999999 79999


Q ss_pred             EEEEeCcCCccC
Q 026451          103 YVTVPKRAKEES  114 (238)
Q Consensus       103 ~ItlPK~~~~~~  114 (238)
                      +|++||....++
T Consensus        82 ~I~lPK~~~~~~   93 (101)
T 2wj5_A           82 SIQATPASAQAS   93 (101)
T ss_dssp             EEEECBCCCCCS
T ss_pred             EEEEECCCcCCC
Confidence            999999865443

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=99.85  E-value=3.6e-21  Score=144.16  Aligned_cols=79  Identities=16%  Similarity=0.351  Sum_probs=69.6

Q ss_pred             EEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEEe-CCEEEEE
Q 026451           30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKFD-GELLYVT  105 (238)
Q Consensus        30 i~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~~-dGvL~It  105 (238)
                      +.|+++.|.|.++||||++++|+|++. ++.|+|+|++...   .+...+.|.|+|.||.++|.++|+|+|. ||||+|+
T Consensus         2 ~~E~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~   80 (85)
T 3q9p_A            2 GSHTADRWRVSLDVNHFAPDELTVKTK-DGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE   80 (85)
T ss_dssp             -CCCCCEEEEEEECTTTCCSEEEEEEE-TTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEE
T ss_pred             ccCcCCEEEEEEECCCCChHHEEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEE
Confidence            468999999999999999999999999 9999999988653   2233479999999999999999999998 9999999


Q ss_pred             EeCc
Q 026451          106 VPKR  109 (238)
Q Consensus       106 lPK~  109 (238)
                      +||.
T Consensus        81 lPK~   84 (85)
T 3q9p_A           81 APMP   84 (85)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            9995

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=99.84  E-value=1.1e-20  Score=155.50  Aligned_cols=91  Identities=27%  Similarity=0.491  Sum_probs=79.8

Q ss_pred             cccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee----cceE------eeEEEEEEECCCCCccC
Q 026451           22 KEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS----DNRY------IMRFEQMFPLPPNSDMD   91 (238)
Q Consensus        22 ~~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~----e~~~------~r~F~r~~~LP~~vD~~   91 (238)
                      ..+.|++||+++++.|+|.++||||++++|+|++.+++.|+|+|++...    ...|      .+.|.|+|.||.++|.+
T Consensus        40 ~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~  119 (151)
T 1gme_A           40 AFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVE  119 (151)
T ss_dssp             HHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGG
T ss_pred             cccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcccc
Confidence            3467999999999999999999999999999999536899999987653    1222      35899999999999999


Q ss_pred             CeeEEEeCCEEEEEEeCcCCc
Q 026451           92 KISGKFDGELLYVTVPKRAKE  112 (238)
Q Consensus        92 ~I~A~~~dGvL~ItlPK~~~~  112 (238)
                      +|+|+|+||||+|++||....
T Consensus       120 ~i~A~~~nGvL~I~lPK~~~~  140 (151)
T 1gme_A          120 EVKAGLENGVLTVTVPKAEVK  140 (151)
T ss_dssp             GCEEEEETTEEEEEEECCCCC
T ss_pred             ceEEEEECCEEEEEEEccCcC
Confidence            999999999999999998654

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=99.84  E-value=2.1e-20  Score=154.87  Aligned_cols=88  Identities=19%  Similarity=0.283  Sum_probs=77.9

Q ss_pred             ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee----cc------e-EeeEEEEEEECCCCCccC
Q 026451           23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS----DN------R-YIMRFEQMFPLPPNSDMD   91 (238)
Q Consensus        23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~----e~------~-~~r~F~r~~~LP~~vD~~   91 (238)
                      .|.| +||+++++.|+|.++||||++++|+|++. ++.|+|+|++...    ..      + ..+.|.|+|.||.+||.+
T Consensus        55 ~~~p-vdi~e~~~~~~v~~dlPG~~~edi~V~~~-~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~  132 (161)
T 4eld_A           55 GFMP-ISIIEGDQHIKVIAWLPGVNKEDIILNAV-GDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEE  132 (161)
T ss_dssp             SCCC-EEEEECSSEEEEEEECTTCCGGGEEEEEE-TTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGG
T ss_pred             cccc-eeEEEeCCEEEEEEECCCCChHhEEEEEE-CCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccc
Confidence            4555 99999999999999999999999999999 9999999988762    21      1 235899999999999999


Q ss_pred             CeeEEEeCCEEEEEEeCcCCc
Q 026451           92 KISGKFDGELLYVTVPKRAKE  112 (238)
Q Consensus        92 ~I~A~~~dGvL~ItlPK~~~~  112 (238)
                      +|+|+|+||||+|+|||....
T Consensus       133 ~i~A~~~nGvL~I~lpK~~~~  153 (161)
T 4eld_A          133 NASAKFENGVLSVILPKAESS  153 (161)
T ss_dssp             GCEEEEETTEEEEEEEBCGGG
T ss_pred             cEEEEEECCEEEEEEEcCCCC
Confidence            999999999999999997553

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=99.83  E-value=1.6e-20  Score=149.00  Aligned_cols=88  Identities=22%  Similarity=0.367  Sum_probs=78.5

Q ss_pred             ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeC-CeEEEEEEEeeec-ceEee-----EEEEEEECCCCCccCCe-e
Q 026451           23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSS-GNITVSGEMLTSD-NRYIM-----RFEQMFPLPPNSDMDKI-S   94 (238)
Q Consensus        23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~-~~L~I~Ger~~~e-~~~~r-----~F~r~~~LP~~vD~~~I-~   94 (238)
                      .+.|++||++++++|.|.++||||++++|+|++. + +.|+|+|++.... ..|.+     .|.|+|.||.++|.++| +
T Consensus        22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~  100 (123)
T 3aab_A           22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVS-GQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEIS  100 (123)
T ss_dssp             HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEE-TTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCE
T ss_pred             cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEe-CCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCe
Confidence            4569999999999999999999999999999999 8 9999999976542 22221     79999999999999999 9


Q ss_pred             EEEeCCEEEEEEeCcCC
Q 026451           95 GKFDGELLYVTVPKRAK  111 (238)
Q Consensus        95 A~~~dGvL~ItlPK~~~  111 (238)
                      |+|+||+|+|++||...
T Consensus       101 A~~~~GvL~I~lPK~~~  117 (123)
T 3aab_A          101 GKYENGVLTIRIPIAGT  117 (123)
T ss_dssp             EEEETTEEEEEEEGGGE
T ss_pred             eEEcCCEEEEEEEcCCC
Confidence            99999999999999854

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=99.83  E-value=4e-20  Score=139.60  Aligned_cols=82  Identities=18%  Similarity=0.312  Sum_probs=67.4

Q ss_pred             EEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee--c-ceEeeEEEEEEECCCCCccCCeeEEE-eCCEEEEEE
Q 026451           31 TEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS--D-NRYIMRFEQMFPLPPNSDMDKISGKF-DGELLYVTV  106 (238)
Q Consensus        31 ~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~--e-~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL~Itl  106 (238)
                      .++++.|+|.++||||++++|+|++. ++.|+|+|++...  + ..+.+.|.|+|.||.++|.++|+|+| .||+|+|++
T Consensus         2 k~~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~   80 (90)
T 2y1y_A            2 AMEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNG   80 (90)
T ss_dssp             ----CCEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEE
T ss_pred             CcCCCEEEEEEECCCCcHHHeEEEEE-CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence            36789999999999999999999999 9999999987653  2 23346899999999999999999999 799999999


Q ss_pred             eCcCCcc
Q 026451          107 PKRAKEE  113 (238)
Q Consensus       107 PK~~~~~  113 (238)
                      ||.....
T Consensus        81 pK~~~~~   87 (90)
T 2y1y_A           81 PRKQVSG   87 (90)
T ss_dssp             CBC----
T ss_pred             EcCCCCC
Confidence            9986543

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=99.81  E-value=8e-20  Score=154.28  Aligned_cols=96  Identities=17%  Similarity=0.225  Sum_probs=71.6

Q ss_pred             ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEE-eCCEE
Q 026451           27 SSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKF-DGELL  102 (238)
Q Consensus        27 ~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL  102 (238)
                      .+||+++++.|+|.++||||++|+|+|++. ++.|+|+|++...   ++.+.+.|.|+|.||.+||.++|+|+| +||||
T Consensus        65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL  143 (175)
T 2klr_A           65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVL  143 (175)
T ss_dssp             ----CCCCSEEEEEECCSSCCGGGEEEEEE-TTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCE
T ss_pred             ceEEEEcCCeEEEEEECCCCChHHEEEEEE-CCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEE
Confidence            379999999999999999999999999999 9999999987653   233446899999999999999999999 69999


Q ss_pred             EEEEeCcCCccCCCCCCCCcCCCC
Q 026451          103 YVTVPKRAKEESTEQPSLPASASG  126 (238)
Q Consensus       103 ~ItlPK~~~~~~~~~p~~~~~~~~  126 (238)
                      +|++||.....   .++.+.+..+
T Consensus       144 ~I~lPK~~~~~---~~r~I~I~~~  164 (175)
T 2klr_A          144 TVNGPRKQVSG---PERTIPITRE  164 (175)
T ss_dssp             EEEEECC-----------------
T ss_pred             EEEEECCCCCC---CCeEEEEecC
Confidence            99999975432   2345555443

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.77  E-value=1.5e-18  Score=158.38  Aligned_cols=89  Identities=18%  Similarity=0.328  Sum_probs=81.2

Q ss_pred             ccccceeEEEcCC----eEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee--cceEeeEEEEEEECCCCCccCCeeEE
Q 026451           23 EFVPSSGWTEDSN----GHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS--DNRYIMRFEQMFPLPPNSDMDKISGK   96 (238)
Q Consensus        23 ~~~P~~di~e~~d----~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~--e~~~~r~F~r~~~LP~~vD~~~I~A~   96 (238)
                      .+.|++||+|+++    .|.|.++||||++++|+|++. ++.|+|+|++...  +++..+.|.|+|.||.+||.++|+|+
T Consensus        96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~-~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~  174 (314)
T 2bol_A           96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKAD-KNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQAT  174 (314)
T ss_dssp             TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEE-TTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEE
T ss_pred             cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEE-CCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEE
Confidence            3779999999999    999999999999999999999 9999999988653  34555799999999999999999999


Q ss_pred             Ee-CCEEEEEEeCcCCc
Q 026451           97 FD-GELLYVTVPKRAKE  112 (238)
Q Consensus        97 ~~-dGvL~ItlPK~~~~  112 (238)
                      |+ ||||+|++||..+.
T Consensus       175 ~~~nGVL~I~lPK~~~~  191 (314)
T 2bol_A          175 ITTDDVLVIEAPVNEPN  191 (314)
T ss_dssp             ECSSSEEEEEEEBSSCC
T ss_pred             EeCCCEEEEEEeccCcc
Confidence            99 99999999998654

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.65  E-value=1.4e-16  Score=145.53  Aligned_cols=83  Identities=18%  Similarity=0.211  Sum_probs=69.8

Q ss_pred             cceeEEEcC---CeEEEEEEc-CCCCCCCeEEEEEeCCeEEEEEEEeeec------ceEeeEEEEEEECCCCCccCCeeE
Q 026451           26 PSSGWTEDS---NGHYLLVDL-PDFKKEQVKLQVDSSGNITVSGEMLTSD------NRYIMRFEQMFPLPPNSDMDKISG   95 (238)
Q Consensus        26 P~~di~e~~---d~~~l~vdL-PGf~~edI~V~V~~~~~L~I~Ger~~~e------~~~~r~F~r~~~LP~~vD~~~I~A   95 (238)
                      ..++|.+++   +.|.|.++| |||+|++|+|+|+ ++.|+|+|++..++      .+++|.|.|+|.||++||.++|+|
T Consensus       221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~-~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A  299 (314)
T 2bol_A          221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAK-GNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQA  299 (314)
T ss_dssp             CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEES-SSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEE
T ss_pred             CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEE-CCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEE
Confidence            446666655   578899999 9999999999999 99999999987652      344579999999999999999999


Q ss_pred             EEeCCEEEEEEeCc
Q 026451           96 KFDGELLYVTVPKR  109 (238)
Q Consensus        96 ~~~dGvL~ItlPK~  109 (238)
                      +|+||||+|++||.
T Consensus       300 ~~~dGvL~i~~Pk~  313 (314)
T 2bol_A          300 EIVDGLMVVEAPLF  313 (314)
T ss_dssp             EEETTEEEEEEEEE
T ss_pred             EEeCCEEEEEEecC
Confidence            99999999999986

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=98.93  E-value=2.7e-09  Score=82.66  Aligned_cols=83  Identities=7%  Similarity=0.093  Sum_probs=73.0

Q ss_pred             ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEE
Q 026451           23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELL  102 (238)
Q Consensus        23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL  102 (238)
                      ...|+++|+++.+.++|.+.|||+.++++.|.+. ++.|.|++....  +   ..|...+.|+..||++..++++.+|.|
T Consensus         7 ~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~-~~~l~v~~~~~~--~---~~y~~~~~L~~~I~~e~s~~~~~~~~l   80 (114)
T 1rl1_A            7 QSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFS-EKELSALVKLPS--G---EDYNLKLELLHPIIPEQSTFKVLSTKI   80 (114)
T ss_dssp             -CCCCEEEEECSSEEEEEECCCSCCGGGEEEECS-SSCEEEEEECTT--S---SEEEEEECBSSCCCGGGEEEEECSSSE
T ss_pred             CCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEE-cCEEEEEEEeCC--C---cEEEEEeeCCCcCCccccEEEEECCEE
Confidence            3468899999999999999999999999999999 899999986431  1   268888999999999999999999999


Q ss_pred             EEEEeCcCC
Q 026451          103 YVTVPKRAK  111 (238)
Q Consensus       103 ~ItlPK~~~  111 (238)
                      .|+|+|..+
T Consensus        81 ~i~L~K~~~   89 (114)
T 1rl1_A           81 EIKLKKPEA   89 (114)
T ss_dssp             EEEEECSSC
T ss_pred             EEEEEcCCC
Confidence            999999854

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=98.88  E-value=3.8e-09  Score=78.39  Aligned_cols=81  Identities=11%  Similarity=-0.017  Sum_probs=71.8

Q ss_pred             ccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEE
Q 026451           25 VPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYV  104 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~I  104 (238)
                      .|+++|+++.+..+|.+.+||+.++++.|.+. .+.|.|++....  +   ..|...+.|+..||++..++++.+|.|.|
T Consensus         2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~-~~~l~v~~~~~~--~---~~y~~~~~L~~~I~~~~s~~~~~~~~l~i   75 (92)
T 2xcm_C            2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFG-EQILSVVIEVPG--E---DAYYLQPRLFGKIIPDKCKYEVLSTKIEI   75 (92)
T ss_dssp             CSEEEEEEETTEEEEEEECCSCCGGGEEEEEC-SSBEEEEECCTT--S---CCEEECCBBSSCBCGGGCEEEECSSCEEE
T ss_pred             CccccEEeCCCEEEEEEEECCCChHHeEEEEE-CCEEEEEEEcCC--C---cEEEEeeEcCCccCchhEEEEEECCEEEE
Confidence            47899999999999999999999999999999 999999875421  1   25778889999999999999999999999


Q ss_pred             EEeCcCC
Q 026451          105 TVPKRAK  111 (238)
Q Consensus       105 tlPK~~~  111 (238)
                      +|+|..+
T Consensus        76 ~L~K~~~   82 (92)
T 2xcm_C           76 CLAKADI   82 (92)
T ss_dssp             EEEBSSS
T ss_pred             EEEcCCC
Confidence            9999854

>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}

Probab=97.97  E-value=1.1e-05  Score=65.19  Aligned_cols=79  Identities=18%  Similarity=0.312  Sum_probs=68.5

Q ss_pred             cccceeEEEcCCeEEEEEEcCCCC--CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCC-ccCCeeEEEe--
Q 026451           24 FVPSSGWTEDSNGHYLLVDLPDFK--KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNS-DMDKISGKFD--   98 (238)
Q Consensus        24 ~~P~~di~e~~d~~~l~vdLPGf~--~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~v-D~~~I~A~~~--   98 (238)
                      ..|.+.+.++++..+|.|.+|...  ..++++.|+ +..+...          ...|..++.||..| |.+.-+|+|+  
T Consensus         2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~-~~~F~F~----------~~PYyLRL~LP~~V~e~~~~kA~YD~d   70 (134)
T 2k8q_A            2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFH----------LSPYYLRLRFPHELIDDERSTAQYDSK   70 (134)
T ss_dssp             CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEEC-SSSEEEC----------SSSSCEEECCSSCEECCSSCEEEEETT
T ss_pred             cCceEEEEECCCEEEEEEEcCccccCccccEEEEe-CCEEEEe----------cCCeEEEecCCCeeecCCCcceeEecc
Confidence            469999999999999999999999  899999998 7776663          12577889999998 9999999997  


Q ss_pred             CCEEEEEEeCcCCcc
Q 026451           99 GELLYVTVPKRAKEE  113 (238)
Q Consensus        99 dGvL~ItlPK~~~~~  113 (238)
                      .|.|+|+|||..+-+
T Consensus        71 ~~~~~VtLpK~~~Ge   85 (134)
T 2k8q_A           71 DECINVKVAKLNKNE   85 (134)
T ss_dssp             TTEEEEEEEESSTTC
T ss_pred             CCEEEEEEeCCCCCC
Confidence            799999999987654

>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}

Probab=97.95  E-value=9e-05  Score=58.35  Aligned_cols=80  Identities=18%  Similarity=0.270  Sum_probs=67.8

Q ss_pred             ccccceeEEEcCCeEEEEEEcCCCC--CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCC-ccCCeeEEEe-
Q 026451           23 EFVPSSGWTEDSNGHYLLVDLPDFK--KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNS-DMDKISGKFD-   98 (238)
Q Consensus        23 ~~~P~~di~e~~d~~~l~vdLPGf~--~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~v-D~~~I~A~~~-   98 (238)
                      ...|.+.+.++++..+|.+-+|.++  ..++++.|+ ++.++...          ..|-.++.||..+ |-+.-+|+|+ 
T Consensus        15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd-~~~F~F~~----------~PYyLRL~lP~~vved~~~~A~YD~   83 (115)
T 3eud_A           15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFHL----------SPYYLRLRFPHELIDDERSTAQYDS   83 (115)
T ss_dssp             CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEE-TTEEEEEE----------TTEEEEEECSSCEECSTTCEEEEET
T ss_pred             EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEe-CCEEEEec----------CCeEEEEecCcceecCCCcceEEeC
Confidence            3579999999999999999999866  889999999 88776642          2577889999986 7788899997 


Q ss_pred             -CCEEEEEEeCcCCcc
Q 026451           99 -GELLYVTVPKRAKEE  113 (238)
Q Consensus        99 -dGvL~ItlPK~~~~~  113 (238)
                       +|.++|++||..+-+
T Consensus        84 d~g~~~v~lpK~~~GE   99 (115)
T 3eud_A           84 KDECINVKVAKLNKNE   99 (115)
T ss_dssp             TTTEEEEEEEESSTTC
T ss_pred             CCcEEEEEEcCCcCCC
Confidence             799999999987643

>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=0.00015  Score=57.20  Aligned_cols=86  Identities=12%  Similarity=0.196  Sum_probs=71.3

Q ss_pred             CccccccceeEEEcCCeEEEEEEcCCC---CCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEE-CCCCCccCCeeE
Q 026451           20 IVKEFVPSSGWTEDSNGHYLLVDLPDF---KKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFP-LPPNSDMDKISG   95 (238)
Q Consensus        20 ~~~~~~P~~di~e~~d~~~l~vdLPGf---~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~-LP~~vD~~~I~A   95 (238)
                      .|..-.+.|+|.++.+...|.|.|+|+   .++++.|.+. .+.|.|......  +   ..|...+. |-..||+++-+.
T Consensus        15 ~y~~~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~-~~~l~v~~~~~~--~---~~y~~~~~~L~~~I~~e~S~~   88 (127)
T 1x5m_A           15 GYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFT-ERSFDLLVKNLN--G---KSYSMIVNNLLKPISVEGSSK   88 (127)
T ss_dssp             CCCEECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEEC-SSEEEEEECSCS--S---SCEEEEEECBSSCCCTTTCEE
T ss_pred             ccccCccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEE-cCEEEEEEEcCC--C---CcEEEEhHHhcCccCcccCEE
Confidence            444446799999999999999999999   8999999999 899999863221  1   24667775 999999999888


Q ss_pred             EEeCCEEEEEEeCcCC
Q 026451           96 KFDGELLYVTVPKRAK  111 (238)
Q Consensus        96 ~~~dGvL~ItlPK~~~  111 (238)
                      ++.++.|.|+|-|..+
T Consensus        89 ~v~~~kVei~L~K~~~  104 (127)
T 1x5m_A           89 KVKTDTVLILCRKKVE  104 (127)
T ss_dssp             EEETTEEEEEEECSSS
T ss_pred             EEeCCEEEEEEEECCC
Confidence            8889999999999854

>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=97.70  E-value=0.00017  Score=57.99  Aligned_cols=98  Identities=9%  Similarity=0.041  Sum_probs=75.7

Q ss_pred             ccccCCCCccccccceeEEEc-CCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec------ceE-eeEEEEEEEC
Q 026451           13 KTLTNNPIVKEFVPSSGWTED-SNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD------NRY-IMRFEQMFPL   84 (238)
Q Consensus        13 ~~~~~~~~~~~~~P~~di~e~-~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e------~~~-~r~F~r~~~L   84 (238)
                      .+-++-++...-.++++|+++ .+..+|.|.++++.++++.|.+. .+.|.|........      .+. -..|...+.|
T Consensus         7 ~~~~~~~~~~~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~-~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L   85 (134)
T 1wh0_A            7 GVDEPESMVNLAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFR-EQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKL   85 (134)
T ss_dssp             SSCCGGGSEEESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEEC-SSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEB
T ss_pred             CCcCCcccccccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEE-CCEEEEEEEcCCCcccccccccCcceeEEEeccc
Confidence            334444555555789999999 99999999999999999999999 99999986433211      000 0147777889


Q ss_pred             CCCCccCCeeEEEeCCEEEEEEeCcCC
Q 026451           85 PPNSDMDKISGKFDGELLYVTVPKRAK  111 (238)
Q Consensus        85 P~~vD~~~I~A~~~dGvL~ItlPK~~~  111 (238)
                      -..|+++.-+.++.++-|.|+|.|...
T Consensus        86 ~~~I~pe~S~~~v~~~kIeI~L~K~e~  112 (134)
T 1wh0_A           86 RNLIEPEQCTFCFTASRIDICLRKRQS  112 (134)
T ss_dssp             SSCEEEEEEEEEECSSEEEEEEEESSS
T ss_pred             cccCCchhCEEEEeCCEEEEEEEECCC
Confidence            999999998888889999999999753

>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4

Probab=97.47  E-value=0.0016  Score=51.02  Aligned_cols=82  Identities=17%  Similarity=0.171  Sum_probs=67.1

Q ss_pred             ccccceeEEEcCCeEEEEEEcC-CC-CCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC
Q 026451           23 EFVPSSGWTEDSNGHYLLVDLP-DF-KKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE  100 (238)
Q Consensus        23 ~~~P~~di~e~~d~~~l~vdLP-Gf-~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG  100 (238)
                      .-.|.|.|.++.+..+|.|.|| |+ ++++|.|.+. .+.|.|......  +.   .+.-...|...|+++.-+.++.++
T Consensus        17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~-~~~l~v~~~~~~--~~---~~~~~~~L~~~I~~e~S~w~i~~~   90 (124)
T 1wgv_A           17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALS-SSSIRVAMLEEN--GE---RVLMEGKLTHKINTESSLWSLEPG   90 (124)
T ss_dssp             BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEEC-SSEEEEEEECSS--SE---EEEEEEEBSSCBCTTTCEEEECTT
T ss_pred             CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEE-cCEEEEEEEccC--CC---ceEEcccccCcCCCcCCEEEEeCC
Confidence            3468999999999999999998 88 8999999999 999999864311  11   233556799999999988889887


Q ss_pred             -EEEEEEeCcC
Q 026451          101 -LLYVTVPKRA  110 (238)
Q Consensus       101 -vL~ItlPK~~  110 (238)
                       .|.|+|-|..
T Consensus        91 k~v~i~L~K~~  101 (124)
T 1wgv_A           91 KCVLVNLSKVG  101 (124)
T ss_dssp             SEEEEEECBSS
T ss_pred             CEEEEEEEECC
Confidence             4999999974

>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}

Probab=97.41  E-value=0.00093  Score=52.89  Aligned_cols=75  Identities=16%  Similarity=0.220  Sum_probs=62.1

Q ss_pred             ccceeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEE
Q 026451           25 VPSSGWTEDSNGHYLLVDLP-DFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLY  103 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLP-Gf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~  103 (238)
                      .|.|.|.++.+..+|.|.|| |+++++|.|.+. .+.|.|...     +.   . .-...|...|+++.-+.++.++-|.
T Consensus         4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~-~~~l~v~~~-----g~---~-~~~~~L~~~I~~e~S~w~i~~~kv~   73 (131)
T 2o30_A            4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMV-GKKICVKNQ-----GE---I-VIDGELLHEVDVSSLWWVINGDVVD   73 (131)
T ss_dssp             -CCCEEEEETTEEEEEEECC---CCSCEEEEEE-TTEEEEEET-----TE---E-EEEEEBSSCEEEEEEEEEEETTEEE
T ss_pred             CCcEEEEecCCEEEEEEECCCCCCccceEEEEE-CCEEEEEEC-----CE---e-eEccccccccccccCEEEEeCCEEE
Confidence            48899999999999999996 899999999999 999999862     11   1 3345788999999988888888899


Q ss_pred             EEEeCc
Q 026451          104 VTVPKR  109 (238)
Q Consensus       104 ItlPK~  109 (238)
                      |+|-|.
T Consensus        74 i~L~K~   79 (131)
T 2o30_A           74 VNVTKK   79 (131)
T ss_dssp             EEEEES
T ss_pred             EEEEEC
Confidence            999997

>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A

Probab=97.40  E-value=0.0011  Score=51.90  Aligned_cols=81  Identities=15%  Similarity=0.112  Sum_probs=65.7

Q ss_pred             cccccceeEEEcCCeEEEEEEcC-C--CCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEe
Q 026451           22 KEFVPSSGWTEDSNGHYLLVDLP-D--FKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFD   98 (238)
Q Consensus        22 ~~~~P~~di~e~~d~~~l~vdLP-G--f~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~   98 (238)
                      ..-.|.|.|.++.+...|.|.|| |  ++.++|.|.+. .+.|.|....    .    .+.-...|...|+++.-..+++
T Consensus        13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~-~~~l~v~~kg----~----~~~~~g~L~~~I~~deS~w~i~   83 (121)
T 3qor_A           13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQ-RRHLRVGLKG----Q----PAIIDGELYNEVKVEESSWLIA   83 (121)
T ss_dssp             SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEE-TTEEEEEETT----S----CCSEEEEBSSCBCGGGCEEEEE
T ss_pred             CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEE-cCEEEEEEcC----c----ceEEeccccccccccccEEEEc
Confidence            34468899999999999999998 4  78999999999 8899886421    1    1223457888999999889999


Q ss_pred             CC-EEEEEEeCcCC
Q 026451           99 GE-LLYVTVPKRAK  111 (238)
Q Consensus        99 dG-vL~ItlPK~~~  111 (238)
                      +| .|.|+|-|...
T Consensus        84 ~~~~i~i~L~K~~~   97 (121)
T 3qor_A           84 DGAVVTVHLEKINK   97 (121)
T ss_dssp             TTTEEEEEEEBSSS
T ss_pred             CCCEEEEEEEECCC
Confidence            88 99999998743

>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}

Probab=97.33  E-value=0.0013  Score=53.87  Aligned_cols=82  Identities=12%  Similarity=0.226  Sum_probs=67.7

Q ss_pred             CccccccceeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEe
Q 026451           20 IVKEFVPSSGWTEDSNGHYLLVDLP-DFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFD   98 (238)
Q Consensus        20 ~~~~~~P~~di~e~~d~~~l~vdLP-Gf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~   98 (238)
                      +.....|.|.|.++.+..+|+|.|| |+++++|.|.+. .+.|.|...     +.   .+ -...|...|+++.-+.++.
T Consensus         8 ~~~~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~-~~~L~v~~k-----g~---~~-l~g~L~~~I~~eeS~w~i~   77 (157)
T 2rh0_A            8 VVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQ-SRHVALAVG-----GR---EI-LKGKLFDSTIADEGTWTLE   77 (157)
T ss_dssp             CCCEECSSEEEEECSSEEEEEEECCTTCCGGGEEEEEC-SSEEEEEET-----TE---EE-EEEEBSSCBCGGGCEEEEE
T ss_pred             cccCCCCcEEEEecCCEEEEEEECCCCCcccceEEEEe-cCEEEEEEC-----CE---EE-EeeccccccCccccEEEEc
Confidence            3444568999999999999999998 899999999999 999999753     11   12 4467889999999889998


Q ss_pred             CC-EEEEEEeCcCC
Q 026451           99 GE-LLYVTVPKRAK  111 (238)
Q Consensus        99 dG-vL~ItlPK~~~  111 (238)
                      ++ +|.|+|-|...
T Consensus        78 ~~k~v~I~L~K~~~   91 (157)
T 2rh0_A           78 DRKMVRIVLTKTKR   91 (157)
T ss_dssp             CCCEEEEEEEBSSC
T ss_pred             CCcEEEEEEEEcCC
Confidence            87 59999999854

>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2

Probab=97.31  E-value=0.00094  Score=52.46  Aligned_cols=79  Identities=14%  Similarity=0.144  Sum_probs=66.1

Q ss_pred             cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEE
Q 026451           26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVT  105 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~It  105 (238)
                      |.++|+++.+..+|+|.||+.  +++.|.+. .+.|.|++..... +   ..|.-.+.|-..|+++.-+.++.+.-+.|+
T Consensus         4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~-~~~l~~~~~~~~~-~---~~y~~~l~L~~~I~~e~S~~~v~~~kiei~   76 (125)
T 1ejf_A            4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFE-KSKLTFSCLGGSD-N---FKHLNEIDLFHCIDPNDSKHKRTDRSILCC   76 (125)
T ss_dssp             CCEEEEECSSEEEEEECCTTE--EEEEEEEE-TTEEEEEEEETTT-T---EEEEEEEEBSSCEEEEEEEEEECSSCEEEE
T ss_pred             CceeEEeCCCEEEEEEEecCC--CceEEEEE-CCEEEEEEEeCCC-C---ceEEEEEEccceeccccCEEEECCCEEEEE
Confidence            389999999999999999995  68999998 9999998764221 1   247777899999999998888888889999


Q ss_pred             EeCcCC
Q 026451          106 VPKRAK  111 (238)
Q Consensus       106 lPK~~~  111 (238)
                      |.|..+
T Consensus        77 L~K~~~   82 (125)
T 1ejf_A           77 LRKGES   82 (125)
T ss_dssp             EEESST
T ss_pred             EEECCC
Confidence            999753

>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4

Probab=97.27  E-value=0.00058  Score=53.97  Aligned_cols=79  Identities=16%  Similarity=0.141  Sum_probs=65.0

Q ss_pred             cccceeEEEcCCeEEEEEEcC-C--CCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC
Q 026451           24 FVPSSGWTEDSNGHYLLVDLP-D--FKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE  100 (238)
Q Consensus        24 ~~P~~di~e~~d~~~l~vdLP-G--f~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG  100 (238)
                      -.|.|.|.++.+..+|.|.|| |  +++++|.|.+. .+.|.|...     +.   .+.-...|...|+++.-+.++.+|
T Consensus         6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~-~~~l~v~~k-----g~---~~~~~~~L~~~I~~e~s~w~i~~~   76 (131)
T 1wfi_A            6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQ-RRHLRVGLK-----GQ---PPVVDGELYNEVKVEESSWLIEDG   76 (131)
T ss_dssp             SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEE-TTEEEEEET-----TS---CCSBCSCBSSCBCSTTCEEEEETT
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEe-CCEEEEEEC-----Cc---eEEEecccccccccccCEEEEcCC
Confidence            358899999999999999999 6  89999999999 999999753     11   111234677889999988899988


Q ss_pred             -EEEEEEeCcCC
Q 026451          101 -LLYVTVPKRAK  111 (238)
Q Consensus       101 -vL~ItlPK~~~  111 (238)
                       .|.|+|-|...
T Consensus        77 k~v~i~L~K~~~   88 (131)
T 1wfi_A           77 KVVTVHLEKINK   88 (131)
T ss_dssp             TEEEEEEEBSSS
T ss_pred             CEEEEEEEECCC
Confidence             89999999854

>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}

Probab=97.10  E-value=0.001  Score=61.52  Aligned_cols=70  Identities=23%  Similarity=0.262  Sum_probs=56.2

Q ss_pred             cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCcc-CCeeEEEeCCEEEE
Q 026451           26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDM-DKISGKFDGELLYV  104 (238)
Q Consensus        26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~-~~I~A~~~dGvL~I  104 (238)
                      +++.+...  .|.+.+.||||++++|++.-. +.-|+|+.          +.|+|.+.||....- .-..|+|+||.|+|
T Consensus       298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~-gdeL~v~~----------g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i  364 (374)
T 3igf_A          298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQY-GPEVTVEA----------GDQRRNIFLPPALSGRPITGAKFQNNYLII  364 (374)
T ss_dssp             CSEEEETT--TTEEEEECTTCCGGGCEEEEE-TTEEEEEE----------TTEEEEEECCTTTTTCCEEEEEEETTEEEE
T ss_pred             CCEEEEec--cEEEEEECCCCCHHHeEEEEE-CCeEEEEE----------CCEeecccCCHHHcCCCccccEEECCEEEE
Confidence            34554333  899999999999999999998 99999973          579999999986332 23458999999999


Q ss_pred             EEeC
Q 026451          105 TVPK  108 (238)
Q Consensus       105 tlPK  108 (238)
                      ++-.
T Consensus       365 ~~~~  368 (374)
T 3igf_A          365 SFLE  368 (374)
T ss_dssp             EECC
T ss_pred             EEeh
Confidence            9853

>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}

Probab=96.68  E-value=0.00079  Score=53.73  Aligned_cols=84  Identities=13%  Similarity=0.228  Sum_probs=60.3

Q ss_pred             cccceeEEEcCCe-------EEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecc-eEeeEEEEEEECCCCCccCCeeE
Q 026451           24 FVPSSGWTEDSNG-------HYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDN-RYIMRFEQMFPLPPNSDMDKISG   95 (238)
Q Consensus        24 ~~P~~di~e~~d~-------~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~-~~~r~F~r~~~LP~~vD~~~I~A   95 (238)
                      ..|.++|.++.+.       .+|+|.||+..  ++.|.+. .+.|.|++......+ .-...|...+.|...||++.-+.
T Consensus         5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~-~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~   81 (134)
T 2cg9_X            5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIK-PSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMH   81 (134)
T ss_dssp             ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBC-SSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEE
T ss_pred             cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEE-CCEEEEEEecccccCCccCceEEEEEEChhhccccccEE
Confidence            4588999999877       99999999974  8888888 899999876532100 00125677789999999999888


Q ss_pred             EEeCCE-EEEEEeCcC
Q 026451           96 KFDGEL-LYVTVPKRA  110 (238)
Q Consensus        96 ~~~dGv-L~ItlPK~~  110 (238)
                      ++.++. |.|+|.|..
T Consensus        82 ~v~~~~~vei~L~K~~   97 (134)
T 2cg9_X           82 KVANGQHYFLKLYKKD   97 (134)
T ss_dssp             EECCC--CEEEEEECS
T ss_pred             EECCCEEEEEEEEECC
Confidence            888888 999999975

>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}

Probab=96.54  E-value=0.0045  Score=50.38  Aligned_cols=80  Identities=20%  Similarity=0.312  Sum_probs=62.6

Q ss_pred             cccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEE
Q 026451           24 FVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLY  103 (238)
Q Consensus        24 ~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~  103 (238)
                      ..|.++|+++.+..+|+|.|+++  +++.|.+.+.+.|.|++.  ...+   ..|...+.|-..|+++ -+.+....-+.
T Consensus         3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~--~~~~---~~y~~~l~L~~~Idpe-S~~~v~~~kIe   74 (150)
T 2kmw_A            3 RNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL--GAQG---ERFEFSLELYGKIMTE-YRKNVGLRNII   74 (150)
T ss_dssp             ECCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE--TTTT---EEEEEEEEBSSCEEEE-EEEEEESSSEE
T ss_pred             cCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE--cCCC---ceEEEEeEhhhccccc-ceEEecCCEEE
Confidence            35899999999999999999997  456666642478999986  2222   2567778898999999 77777788899


Q ss_pred             EEEeCcCC
Q 026451          104 VTVPKRAK  111 (238)
Q Consensus       104 ItlPK~~~  111 (238)
                      |+|.|..+
T Consensus        75 i~L~K~e~   82 (150)
T 2kmw_A           75 FSIQKEER   82 (150)
T ss_dssp             EEEEECCS
T ss_pred             EEEEECCC
Confidence            99999753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	238
d1gmea_	150	b.15.1.1 (A:) Small heat shock protein {Wheat (Tri	5e-09
d1shsa_	115	b.15.1.1 (A:) Small heat shock protein {Archaeon M	7e-07

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 150

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 51.3 bits (122), Expect = 5e-09
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 10/101 (9%)

Query: 24  FVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGE----------MLTSDNR 73
                 W E    H    DLP  KKE+VK++V+    + VSGE                R
Sbjct: 41  ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVER 100

Query: 74  YIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEES 114
              +F + F L  ++ ++++    +  +L VTVPK   ++ 
Sbjct: 101 SSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKP 141

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 115

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 44.6 bits (105), Expect = 7e-07
 Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 10/92 (10%)

Query: 32  EDSNGHYLLVDLPDFKKEQVKLQVDSSG---NITVSGEMLTSDNRYIMR-------FEQM 81
           E      ++  LP   KE + L             S  M+T   R I           + 
Sbjct: 17  EGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRT 76

Query: 82  FPLPPNSDMDKISGKFDGELLYVTVPKRAKEE 113
             LP     +  S KF+  +L V +PK     
Sbjct: 77  IKLPATVKEENASAKFENGVLSVILPKAESSI 108

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	238
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	99.84
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	99.83
d1rl1a_	92	Suppressor of G2 allele of skp1 homolog, gst1 {Hum	98.21
d1ejfa_	110	Co-chaperone p23 {Human (Homo sapiens) [TaxId: 960	97.22
d1wgva_	124	NudC domain containing protein 3, NUDCD3 (KIAA1068	96.84
d1wh0a_	134	Ubiquitin carboxyl-terminal hydrolase 19, USP19 {H	96.55
d1wfia_	131	Nuclear migration protein nudC {Mouse (Mus musculu	96.31

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.84  E-value=7e-21  Score=147.16  Aligned_cols=86  Identities=17%  Similarity=0.215  Sum_probs=76.5

Q ss_pred             ccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec----c-------eEeeEEEEEEECCCCCccCCe
Q 026451           25 VPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----N-------RYIMRFEQMFPLPPNSDMDKI   93 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e----~-------~~~r~F~r~~~LP~~vD~~~I   93 (238)
                      .|++||+++++.|.|.++||||++++|+|+++ ++.|+|+|++....    .       ...+.|.|+|.||.++|.++|
T Consensus        10 ~~pvdi~e~~~~~~i~~~lPG~~~edi~v~v~-~~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i   88 (115)
T d1shsa_          10 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAV-GDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENA   88 (115)
T ss_dssp             CCCEEEEECSSEEEEEEECTTCCGGGEEEEEE-TTEEEEEEECCCCCCCTTCEEEEECSCCCCEEEEEEECSSCBCGGGC
T ss_pred             cCceEEEEcCCEEEEEEECCCCCHHHEEEEEE-CCEEEEEEEeccccccccccEEEEeeecccceEEEEecCCceeecce
Confidence            35699999999999999999999999999999 99999999875431    1       123589999999999999999


Q ss_pred             eEEEeCCEEEEEEeCcCC
Q 026451           94 SGKFDGELLYVTVPKRAK  111 (238)
Q Consensus        94 ~A~~~dGvL~ItlPK~~~  111 (238)
                      +|+|+||+|+|+|||...
T Consensus        89 ~A~~~nGvL~I~lpK~~~  106 (115)
T d1shsa_          89 SAKFENGVLSVILPKAES  106 (115)
T ss_dssp             EEEEETTEEEEEEEBCGG
T ss_pred             EEEEECCEEEEEEEeCCC
Confidence            999999999999999854

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=99.83  E-value=8.9e-21  Score=153.46  Aligned_cols=94  Identities=27%  Similarity=0.482  Sum_probs=79.1

Q ss_pred             ccccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee----cceE------eeEEEEEEECCCCCcc
Q 026451           21 VKEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS----DNRY------IMRFEQMFPLPPNSDM   90 (238)
Q Consensus        21 ~~~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~----e~~~------~r~F~r~~~LP~~vD~   90 (238)
                      ...+.|++||.++++.|+|.++||||++++|+|++++++.|+|+|++...    +..|      .+.|.|+|.||.++|.
T Consensus        38 ~~~~~p~~dv~e~~~~~~i~~~lPG~~~edi~v~v~~~~~l~i~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~  117 (150)
T d1gmea_          38 AAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKV  117 (150)
T ss_dssp             HHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCG
T ss_pred             cccCCCceeEEECCCEEEEEEEeCCCccCCEEEEEEEccceeEEEEEecccccccceeeeeeeccceEEEEEECCCCeee
Confidence            33456899999999999999999999999999999833578999977543    1222      2479999999999999


Q ss_pred             CCeeEEEeCCEEEEEEeCcCCccC
Q 026451           91 DKISGKFDGELLYVTVPKRAKEES  114 (238)
Q Consensus        91 ~~I~A~~~dGvL~ItlPK~~~~~~  114 (238)
                      ++|+|+|+||||+|+|||....++
T Consensus       118 ~~i~A~~~nGvL~I~lpK~~~~~~  141 (150)
T d1gmea_         118 EEVKAGLENGVLTVTVPKAEVKKP  141 (150)
T ss_dssp             GGCEEEEETTEEEEEEECCCCCTT
T ss_pred             ceeEEEEECCEEEEEEEcCCcCCC
Confidence            999999999999999999865433

>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Suppressor of G2 allele of skp1 homolog, gst1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.4e-06  Score=61.65  Aligned_cols=81  Identities=7%  Similarity=0.100  Sum_probs=69.4

Q ss_pred             ccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEE
Q 026451           25 VPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYV  104 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~I  104 (238)
                      .++|+|+++++...|.+.+||+.++++.|.+. ...|.+......  +   ..|...+.|...|+++..+.++.++-|.|
T Consensus         2 k~ry~W~Qt~~~V~i~i~~~~~~~~~v~v~~~-~~~l~v~~~~~~--~---~~y~~~~~L~~~I~p~~s~~~~~~~kiei   75 (92)
T d1rl1a_           2 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFS-EKELSALVKLPS--G---EDYNLKLELLHPIIPEQSTFKVLSTKIEI   75 (92)
T ss_dssp             CCCEEEEECSSEEEEEECCCSCCGGGEEEECS-SSCEEEEEECTT--S---SEEEEEECBSSCCCGGGEEEEECSSSEEE
T ss_pred             CCceeEEeCCCEEEEEEEeCCCChHheEEEEe-cCEEEEEEEcCC--C---cEEEEEEEcCcccCchhcEEEEeCCEEEE
Confidence            36799999999999999999999999999999 899999864322  1   25677788999999999999999999999


Q ss_pred             EEeCcCC
Q 026451          105 TVPKRAK  111 (238)
Q Consensus       105 tlPK~~~  111 (238)
                      +|-|..+
T Consensus        76 ~L~K~~~   82 (92)
T d1rl1a_          76 KLKKPEA   82 (92)
T ss_dssp             EEECSSC
T ss_pred             EEEECCC
Confidence            9999743

>d1ejfa_ b.15.1.2 (A:) Co-chaperone p23 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Co-chaperone p23-like
domain: Co-chaperone p23
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00077  Score=49.64  Aligned_cols=80  Identities=13%  Similarity=0.109  Sum_probs=66.2

Q ss_pred             ccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEE
Q 026451           25 VPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYV  104 (238)
Q Consensus        25 ~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~I  104 (238)
                      .|++.|.++.+..+|.+.+|+.  .++.|.+. ...|.|++.......    .|...+.|...++++.-+.++.++-|.|
T Consensus         3 p~~~~W~Qt~~~V~i~I~v~~~--~~~~v~i~-~~~l~~~~~~~~~~~----~y~l~~~L~~~I~~~~s~~~v~~~kiei   75 (110)
T d1ejfa_           3 PASAKWYDRRDYVFIEFCVEDS--KDVNVNFE-KSKLTFSCLGGSDNF----KHLNEIDLFHCIDPNDSKHKRTDRSILC   75 (110)
T ss_dssp             CCCEEEEECSSEEEEEECCTTE--EEEEEEEE-TTEEEEEEEETTTTE----EEEEEEEBSSCEEEEEEEEEECSSCEEE
T ss_pred             CCCcEEEECCCEEEEEEEeCCC--CCceEEEE-eceEEEEEEecCCCc----eEEEEEEcccCcccCccEEEEeCCEEEE
Confidence            3569999999999999999985  57888888 888999876543222    4667788999999999999999999999


Q ss_pred             EEeCcCC
Q 026451          105 TVPKRAK  111 (238)
Q Consensus       105 tlPK~~~  111 (238)
                      +|-|..+
T Consensus        76 ~L~K~~~   82 (110)
T d1ejfa_          76 CLRKGES   82 (110)
T ss_dssp             EEEESST
T ss_pred             EEEEcCC
Confidence            9999755

>d1wgva_ b.15.1.4 (A:) NudC domain containing protein 3, NUDCD3 (KIAA1068) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: NudC domain containing protein 3, NUDCD3 (KIAA1068)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.0089  Score=44.56  Aligned_cols=81  Identities=17%  Similarity=0.163  Sum_probs=61.8

Q ss_pred             cccceeEEEcCCeEEEEEEcCC--CCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC-
Q 026451           24 FVPSSGWTEDSNGHYLLVDLPD--FKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE-  100 (238)
Q Consensus        24 ~~P~~di~e~~d~~~l~vdLPG--f~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG-  100 (238)
                      -.+.|.|.++.+...|.|.||.  .++++|.|.+. ...|.|+-....  .   ..+.....|...|+++.-..+++++ 
T Consensus        18 ~~~~Y~W~Qt~~~V~i~i~lp~~~~k~kdv~v~~~-~~~l~v~v~~~~--~---~~~~l~g~L~~~I~~deS~w~i~~~~   91 (124)
T d1wgva_          18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALS-SSSIRVAMLEEN--G---ERVLMEGKLTHKINTESSLWSLEPGK   91 (124)
T ss_dssp             CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEEC-SSEEEEEEECSS--S---EEEEEEEEBSSCBCTTTCEEEECTTS
T ss_pred             CCCCeEEEeECCEEEEEEEeCCCCcchhhEEEEEE-eCEEEEEEeccC--C---cceEEeCcccCcccccccEEEEeCCC
Confidence            3568999999999999999984  35689999999 888888743211  1   1344456899999999999999876 


Q ss_pred             EEEEEEeCcC
Q 026451          101 LLYVTVPKRA  110 (238)
Q Consensus       101 vL~ItlPK~~  110 (238)
                      +|.+.+.|..
T Consensus        92 ~~i~~lkK~~  101 (124)
T d1wgva_          92 CVLVNLSKVG  101 (124)
T ss_dssp             EEEEEECBSS
T ss_pred             EEEEEEEecC
Confidence            5666666654

>d1wh0a_ b.15.1.3 (A:) Ubiquitin carboxyl-terminal hydrolase 19, USP19 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Ubiquitin carboxyl-terminal hydrolase 19, USP19
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0039  Score=48.03  Aligned_cols=86  Identities=9%  Similarity=0.059  Sum_probs=69.8

Q ss_pred             ccceeEEEcC-CeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec-------ceEeeEEEEEEECCCCCccCCeeEE
Q 026451           25 VPSSGWTEDS-NGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD-------NRYIMRFEQMFPLPPNSDMDKISGK   96 (238)
Q Consensus        25 ~P~~di~e~~-d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e-------~~~~r~F~r~~~LP~~vD~~~I~A~   96 (238)
                      .-+.||++++ +...|.|.+.|+.++++.|.+. ++.|.|+-.-....       ......|...+.|-..||++.-+.+
T Consensus        19 ~ir~dwyq~~~~~V~VtI~~K~v~ke~~~V~f~-~~sl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~I~pe~S~~~   97 (134)
T d1wh0a_          19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFR-EQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC   97 (134)
T ss_dssp             CCCEEEEEETTTEEEEEEECCSBCTTSCEEEEC-SSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred             ccccceeecCCCEEEEEEEeCCCchhheEEEEe-CCEEEEEEECCCCcceeeccccCcCeeEEEeeecccccChhHcEEE
Confidence            3478999985 7899999999999999999999 99999986432211       0011378999999999999998888


Q ss_pred             EeCCEEEEEEeCcCC
Q 026451           97 FDGELLYVTVPKRAK  111 (238)
Q Consensus        97 ~~dGvL~ItlPK~~~  111 (238)
                      +....|.|+|-|..+
T Consensus        98 v~~~kiei~L~K~~~  112 (134)
T d1wh0a_          98 FTASRIDICLRKRQS  112 (134)
T ss_dssp             ECSSEEEEEEEESSS
T ss_pred             eCCCEEEEEEEeCCC
Confidence            889999999999754

>d1wfia_ b.15.1.4 (A:) Nuclear migration protein nudC {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: Nuclear migration protein nudC
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.31  E-value=0.0041  Score=47.35  Aligned_cols=79  Identities=16%  Similarity=0.139  Sum_probs=61.0

Q ss_pred             cccceeEEEcCCeEEEEEEcC---CCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeC-
Q 026451           24 FVPSSGWTEDSNGHYLLVDLP---DFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDG-   99 (238)
Q Consensus        24 ~~P~~di~e~~d~~~l~vdLP---Gf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~d-   99 (238)
                      -.|.|.|.++.+...|.|.+|   |+++++|.|.+. .+.|.|.-...   ..+   +  .-.|...|+++.-...+++ 
T Consensus         6 ~~~~Y~W~Qt~~eV~I~V~~~~~~~~~~~di~v~i~-~~~l~v~v~~~---~~l---l--~g~L~~~I~~des~W~ied~   76 (131)
T d1wfia_           6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQ-RRHLRVGLKGQ---PPV---V--DGELYNEVKVEESSWLIEDG   76 (131)
T ss_dssp             SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEE-TTEEEEEETTS---CCS---B--CSCBSSCBCSTTCEEEEETT
T ss_pred             CCCCeEEEeeCCEEEEEEEcCCCCCcchhhEEEEee-CCEEEEEEcCC---cee---e--cccccCcccccccEEEEeCC
Confidence            358999999999998888664   799999999999 99999864221   111   1  1157788999998889986 


Q ss_pred             CEEEEEEeCcCC
Q 026451          100 ELLYVTVPKRAK  111 (238)
Q Consensus       100 GvL~ItlPK~~~  111 (238)
                      ++|.|+|-|...
T Consensus        77 ~~l~i~L~K~~~   88 (131)
T d1wfia_          77 KVVTVHLEKINK   88 (131)
T ss_dssp             TEEEEEEEBSSS
T ss_pred             CEEEEEEEECCC
Confidence            589999999743