Citrus Sinensis ID: 026730

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230----
Protein Sequence
MISKSFKLETGVSFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG
Secondary Structure (PSIPRED)
cccccEEEcccccEEEEcccccHHHHHcccccccHHHHHHHccccccccEEEEEEEEEEcccccccccccEEEEEEEEEEEEccccEEEEEEccccHHHHHHHccccccccccEEEEEEEEEccEEEEEEEccccccEEEEEEEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccEEccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHcccEEEcEEEEEEEEEEEcccccccccccEEEEEEEEEEEEccccEEEEEEccccHHHHHHHHcccccccccEEEEEEEEcccccEEEEEEcccccEEEEEEEEEEcccccccccccEEEEEEEEEcccccccccHHcccccccccccccccccccccHcccccccEEEEEcccccccccccccccccEEccc
Coil and Loop (DISEMBL)
misksfkletGVSFVKLSGVVENYKILQSRYEGSWRKMWLLrpriridglyvsrNTYIRAGVAewkitnpvhIVCYYRYmrffpsgrfiyknsSQKIKDVAKIMNFRAAKadcvftghytlseEKVEAAvlypglrptVLRIRLRLrgttagannRMDLLSLVTSgmndnevnghdediLGVVEgwqddethnpdvpavshkrgltpfvfvpfeeVETSvlnlpvekmdyyvpg
Flexible Loop (DISEMBL)
misksfkletgvsfvklsgvvenyKILQSryegswrkmwllrpriridglyvSRNTYIRagvaewkitnpVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVeaavlypglrptvLRIRLrlrgttagannrmDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVetsvlnlpvekmdyyvpg
Low Complexity Region (SEG)
MISKSFKLETGVSFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG
Disordered region (IsUnstruct)
*******LETGVSFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQD*******VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYY***
Disordered Region (DISOPRED)
*******LETGVSFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKI*NF*****DCVFTGHYTLSEEKVEAAVLYPGLRPTVLRIRLR**********RMDLLSL****************************************RGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG
Disordered Region (DISEMBL)
MISKSFKLETGVSFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG
Disordered Region (DISPRO)
****SFKLETGVSFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNE*NGHDEDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MISKSFKLETGVSFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	234	2.2.26 [Sep-21-2011]
Q9XI00	328	F-box protein 7 OS=Arabid	yes	no	0.935	0.667	0.782	1e-103
Q8BK06	437	F-box only protein 9 OS=M	yes	no	0.393	0.210	0.397	2e-14
Q9UK97	447	F-box only protein 9 OS=H	yes	no	0.388	0.203	0.391	4e-14
Q3ZBT2	437	F-box only protein 9 OS=B	yes	no	0.388	0.208	0.391	5e-14
Q5U2X1	435	F-box only protein 9 OS=R	yes	no	0.393	0.211	0.387	9e-14
F6Y9J3	431	F-box only protein 9 OS=X	yes	no	0.388	0.211	0.380	1e-13
Q6P3K3	421	F-box only protein 9 OS=D	yes	no	0.427	0.237	0.346	5e-12
O74531	361	F-box protein pof7 OS=Sch	yes	no	0.517	0.335	0.266	1e-11
Q12347	344	F-box protein HRT3 OS=Sac	yes	no	0.320	0.218	0.294	0.0001

>sp|Q9XI00|SKI32_ARATH F-box protein 7 OS=Arabidopsis thaliana GN=SKIP32 PE=1 SV=1

 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 173/221 (78%), Positives = 202/221 (91%), Gaps = 2/221 (0%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           + +GV+ENYKILQS+Y+GSWRKMWLLR R+R DGLYVSRNTYIRAG+AEWKITNPVHIVC
Sbjct: 108 QTAGVIENYKILQSKYDGSWRKMWLLRSRVRTDGLYVSRNTYIRAGIAEWKITNPVHIVC 167

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLS--EEKVEAAVLYP 133
           YYRY+RF+PSGRF+YKNSSQK+KDVAK MNF+A+K++ ++ G YTLS  ++K+EAAVLYP
Sbjct: 168 YYRYIRFYPSGRFLYKNSSQKLKDVAKYMNFKASKSENLYKGTYTLSMSDDKIEAAVLYP 227

Query: 134 GLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHN 193
           G RPTVLRIRLRLRGT  GANNRMDLLSLVTSG+ND E++  +EDILG+VEGW+DDETHN
Sbjct: 228 GTRPTVLRIRLRLRGTAIGANNRMDLLSLVTSGVNDEEISSTEEDILGLVEGWEDDETHN 287

Query: 194 PDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           PD+PAVSHKRG+T FVFVPFEEV+ SVLNLP EKMDYYV G
Sbjct: 288 PDIPAVSHKRGMTAFVFVPFEEVDESVLNLPPEKMDYYVTG 328

Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Required for efficient protein synthesis during temperature stress conditions.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8BK06|FBX9_MOUSE F-box only protein 9 OS=Mus musculus GN=Fbxo9 PE=2 SV=1

 Score = 79.3 bits (194), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 33  GSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYK 91
            SWR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRYMRFFP G  +  
Sbjct: 242 ASWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYMRFFPDGHVMML 301

Query: 92  NSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
            + ++   +   +  R  + D +  GHY LS++
Sbjct: 302 TTPEEPPSIVPRLRTRNTRTDAILLGHYRLSQD 334

Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.

Mus musculus (taxid: 10090)

>sp|Q9UK97|FBX9_HUMAN F-box only protein 9 OS=Homo sapiens GN=FBXO9 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 34  SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
           SWR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRY+RFFP G  +   
Sbjct: 253 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLT 312

Query: 93  SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
           + ++ + +   +  R  + D +  GHY LS++
Sbjct: 313 TPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 344

Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.

Homo sapiens (taxid: 9606)

>sp|Q3ZBT2|FBX9_BOVIN F-box only protein 9 OS=Bos taurus GN=FBXO9 PE=2 SV=2

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 34  SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
           SWR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRY+RFFP G  +   
Sbjct: 243 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYVRFFPDGHVMMLT 302

Query: 93  SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
           + ++ + +   +  R  + D +  GHY LS++
Sbjct: 303 TPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 334

Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.

Bos taurus (taxid: 9913)

>sp|Q5U2X1|FBX9_RAT F-box only protein 9 OS=Rattus norvegicus GN=Fbxo9 PE=2 SV=1

 Score = 77.0 bits (188), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 33  GSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYK 91
            SWR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRY+RFFP G  +  
Sbjct: 240 SSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMML 299

Query: 92  NSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
            + ++   +   +  R  + D +  GHY LS++
Sbjct: 300 TTPEEPPSIVPRLRTRNTRTDAILLGHYRLSQD 332

Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.

Rattus norvegicus (taxid: 10116)

>sp|F6Y9J3|FBX9_XENTR F-box only protein 9 OS=Xenopus tropicalis GN=fbxo9 PE=3 SV=1

 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 34  SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
           +WR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRY+RFFP G  +   
Sbjct: 236 TWRQMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYLRFFPDGHVMMLT 295

Query: 93  SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
           + +  + +   +  + A+ D +  GHY LS++
Sbjct: 296 TPEDPQTIVPRLRTKNARTDAMLLGHYRLSQD 327

Substrate recognition component of a (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins and acts as a regulator of mTOR signaling.

Xenopus tropicalis (taxid: 8364)

>sp|Q6P3K3|FBX9_DANRE F-box only protein 9 OS=Danio rerio GN=fbxo9 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 1/101 (0%)

Query: 33  GSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYK 91
            SWR+M+L RPR+R DG+Y+S+ +YIR G           H V YYRY+RFFP G+ +  
Sbjct: 225 SSWREMFLERPRVRFDGVYISKTSYIRQGEESLDGFYRAWHQVEYYRYLRFFPDGQVMML 284

Query: 92  NSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLY 132
            + +        +  + ++ D +  GHY LS++      +Y
Sbjct: 285 TTPEDPLVTVPRLRSKNSRMDSIMFGHYRLSQDTDNQTKVY 325

Substrate recognition component of a (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins and acts as a regulator of mTOR signaling.

Danio rerio (taxid: 7955)

>sp|O74531|POF7_SCHPO F-box protein pof7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pof7 PE=1 SV=2

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 14/135 (10%)

Query: 27  LQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSG 86
           L  +Y+ SW+ ++L +PR R DG Y+S   Y R G ++     P+H++ YYRY+R +P+ 
Sbjct: 181 LVEKYQQSWKTLFLKKPRSRFDGCYISVCRYFRPGTSDTSWNQPIHLITYYRYLRLYPNS 240

Query: 87  RFIYKNSSQKIKDVAKIMNFR-------------AAKADCVFTGHYTLSEEKVEAAVLYP 133
             I   SS +  DV +  + +              +  +   TG ++++    E  ++YP
Sbjct: 241 TCIVYQSSNEPNDVVRNFSVQNTSLFSPMSSSPMFSNGNVALTGSWSMTPSG-EMLIVYP 299

Query: 134 GLRPTVLRIRLRLRG 148
             +      +L++RG
Sbjct: 300 ASQTYTYVQKLQVRG 314

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q12347|HRT3_YEAST F-box protein HRT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRT3 PE=1 SV=1

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 15  VKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGV---AEWKITNPV 71
           + L+G+ +     +  + G   +M   RP I+ +G+Y+S   Y+R G    +   +  PV
Sbjct: 162 MDLNGITDINTFEKEIWRGDDYRMLRERPYIKFEGVYISVVNYVRYGSNAESSLSLLKPV 221

Query: 72  HIVCYYRYMRFFPSGRFI 89
           H++ YYRY RF+ +G+ +
Sbjct: 222 HMITYYRYFRFYENGQCL 239

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	234
358248956	329	uncharacterized protein LOC100786704 [Gl	0.935	0.665	0.858	1e-112
356509387	329	PREDICTED: F-box protein 7-like [Glycine	0.935	0.665	0.849	1e-112
359492545	327	PREDICTED: LOW QUALITY PROTEIN: F-box pr	0.935	0.669	0.858	1e-111
357463567	329	F-box protein [Medicago truncatula] gi|2	0.935	0.665	0.840	1e-110
388513465	329	unknown [Lotus japonicus]	0.935	0.665	0.840	1e-109
449449749	379	PREDICTED: F-box protein 7-like [Cucumis	0.935	0.577	0.835	1e-109
449516302	327	PREDICTED: F-box protein 7-like [Cucumis	0.935	0.669	0.835	1e-108
297845164	328	F-box family protein [Arabidopsis lyrata	0.935	0.667	0.791	1e-103
18395030	328	F-box protein 7 [Arabidopsis thaliana] g	0.935	0.667	0.782	1e-101
147841577	296	hypothetical protein VITISV_006219 [Viti	0.858	0.679	0.726	3e-93

>gi|358248956|ref|NP_001239713.1| uncharacterized protein LOC100786704 [Glycine max] gi|255635177|gb|ACU17944.1| unknown [Glycine max]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 188/219 (85%), Positives = 209/219 (95%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           +L G+VENYKILQS+Y+GSWRKMWLLRPR+R DGLYVSRNTYIRAGVAEWKITNPVH+VC
Sbjct: 111 QLFGIVENYKILQSKYDGSWRKMWLLRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVC 170

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGL 135
           Y+RY+RFFPSGRF+YKNSSQKIKDVAK MNFR++K DCVF GHYTLS++KVEAAVLYPG+
Sbjct: 171 YFRYLRFFPSGRFLYKNSSQKIKDVAKCMNFRSSKIDCVFGGHYTLSDDKVEAAVLYPGM 230

Query: 136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
           RPTVLRIRLRLRGTT GANNRMDL+SLVTSG+N +E +  +EDILGVVEGWQDDETHNPD
Sbjct: 231 RPTVLRIRLRLRGTTTGANNRMDLISLVTSGVNSSEASAPEEDILGVVEGWQDDETHNPD 290

Query: 196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           VPAVSHKRG+TPFVFVPFEEVETSVLNLPVEKMDY+VPG
Sbjct: 291 VPAVSHKRGMTPFVFVPFEEVETSVLNLPVEKMDYFVPG 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509387|ref|XP_003523431.1| PREDICTED: F-box protein 7-like [Glycine max]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 186/219 (84%), Positives = 211/219 (96%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           +LSG+VENY+ILQS+Y+GSWRKMWL RPR+R DGLYVSRNTYIRAGVAEWKITNPVH+VC
Sbjct: 111 QLSGIVENYRILQSKYDGSWRKMWLSRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVC 170

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGL 135
           Y+RY+RFFPSGRF+YKNSSQK+KDVAK MNFR++KADCVF GHYTLS++KVEAAVLYPG+
Sbjct: 171 YFRYLRFFPSGRFLYKNSSQKVKDVAKCMNFRSSKADCVFGGHYTLSDDKVEAAVLYPGM 230

Query: 136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
           RPTVLRIRLR+RGTT+GANNRMDL+SLVTSG+N +E +  +EDILGVVEGWQDDETHNPD
Sbjct: 231 RPTVLRIRLRIRGTTSGANNRMDLISLVTSGVNSSEASAPEEDILGVVEGWQDDETHNPD 290

Query: 196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           VPAVSHKRG+TPFVFVPFEEVETSVLNLPVEKMDY+VPG
Sbjct: 291 VPAVSHKRGMTPFVFVPFEEVETSVLNLPVEKMDYFVPG 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492545|ref|XP_003634429.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein 7-like [Vitis vinifera]

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/219 (85%), Positives = 208/219 (94%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           +LSGVVENYKILQSRYE SWRKMWLLRPR+R DGLYVSRNTYIRAGVAEW++TNPVH+VC
Sbjct: 109 QLSGVVENYKILQSRYESSWRKMWLLRPRVRTDGLYVSRNTYIRAGVAEWRVTNPVHVVC 168

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGL 135
           Y+RY+RFFPSGRF+YKNSSQK+KDV K MN RA+KADCVF+GHYTLS++K+EAAVLYPG+
Sbjct: 169 YFRYIRFFPSGRFLYKNSSQKVKDVVKCMNSRASKADCVFSGHYTLSDDKIEAAVLYPGM 228

Query: 136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
           RPTV RIRLRLRGTTAGANNRMDLLSLVTSG++DNEVNG DEDILGVVEGW++DETHNPD
Sbjct: 229 RPTVWRIRLRLRGTTAGANNRMDLLSLVTSGVSDNEVNGPDEDILGVVEGWEEDETHNPD 288

Query: 196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           VPAVSHKRGL  FVFVPFEEVETS LNLPV+KMDYYV G
Sbjct: 289 VPAVSHKRGLKAFVFVPFEEVETSDLNLPVDKMDYYVAG 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463567|ref|XP_003602065.1| F-box protein [Medicago truncatula] gi|217074340|gb|ACJ85530.1| unknown [Medicago truncatula] gi|355491113|gb|AES72316.1| F-box protein [Medicago truncatula] gi|388500196|gb|AFK38164.1| unknown [Medicago truncatula]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 184/219 (84%), Positives = 206/219 (94%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           +LSG VENYKILQS+Y+GSWRKMWLLRPR+R DGLY SRNTYIR GVAEWKITNPVH+VC
Sbjct: 111 QLSGAVENYKILQSKYDGSWRKMWLLRPRLRFDGLYASRNTYIRVGVAEWKITNPVHVVC 170

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGL 135
           YYRY+RFFPSG+F+YKNSSQKIKDV K MNFR++K DCVF GHYTL+++KVEAAVLYPG+
Sbjct: 171 YYRYLRFFPSGKFLYKNSSQKIKDVVKSMNFRSSKTDCVFGGHYTLTDDKVEAAVLYPGM 230

Query: 136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
           RPTVLRIR+RLRGTT GANNRMDL+SLVTSG++ NE +  +EDILGVVEGWQDDETHNPD
Sbjct: 231 RPTVLRIRMRLRGTTTGANNRMDLISLVTSGVDTNEASTSEEDILGVVEGWQDDETHNPD 290

Query: 196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           VPAVSHKRG+TPFVFVPFEEVETS+LNLPVEKMDYYVPG
Sbjct: 291 VPAVSHKRGMTPFVFVPFEEVETSLLNLPVEKMDYYVPG 329

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388513465|gb|AFK44794.1| unknown [Lotus japonicus]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/219 (84%), Positives = 206/219 (94%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           + SGVVENYKILQS+Y+GSWRKMWLLRPR+R DGLYVSRNTYIRAGVAEWKITNPVH+VC
Sbjct: 111 QFSGVVENYKILQSKYDGSWRKMWLLRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVC 170

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGL 135
           Y+RY+RFFPSGRF+YKNSSQK+KDV K MNFR++KA+CVF G+YTLS++KVEAAVLYPGL
Sbjct: 171 YFRYIRFFPSGRFLYKNSSQKVKDVVKCMNFRSSKAECVFGGNYTLSDDKVEAAVLYPGL 230

Query: 136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
           RPTVLRIRLRLRGT  GANNRMDL+SLVTSG+N +E +  +EDILGVV+GWQDDETHNPD
Sbjct: 231 RPTVLRIRLRLRGTATGANNRMDLISLVTSGVNSSEASAPEEDILGVVDGWQDDETHNPD 290

Query: 196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           VPAVSHKRG+ PFVFVPFEEVE SVLNLPVEKMDYYVPG
Sbjct: 291 VPAVSHKRGMAPFVFVPFEEVEASVLNLPVEKMDYYVPG 329

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449749|ref|XP_004142627.1| PREDICTED: F-box protein 7-like [Cucumis sativus]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 183/219 (83%), Positives = 206/219 (94%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           +LSGVVENYK LQS Y+GSWRKMWLLRPRIR DGLYVSRNTYIRAG+AEWKITNPVH+VC
Sbjct: 161 QLSGVVENYKFLQSMYDGSWRKMWLLRPRIRTDGLYVSRNTYIRAGIAEWKITNPVHLVC 220

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGL 135
           Y+RY+RFFPSGRF+YKNSSQKIKDVAK MNFRA+KADC+F GHYTLS++KVEAAVLY G 
Sbjct: 221 YFRYIRFFPSGRFLYKNSSQKIKDVAKCMNFRASKADCIFGGHYTLSDDKVEAAVLYSGA 280

Query: 136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
           RPTVLRIR+RLRGT+ GANNRMDLL+LVTSGMN+NEV   +EDILG+VE W+DDETHNPD
Sbjct: 281 RPTVLRIRMRLRGTSTGANNRMDLLTLVTSGMNNNEVGDPEEDILGIVERWRDDETHNPD 340

Query: 196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           VPAVSHKRGLTPF+FVPF++VETS LNLPV+KMDY+VPG
Sbjct: 341 VPAVSHKRGLTPFIFVPFDQVETSELNLPVDKMDYFVPG 379

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516302|ref|XP_004165186.1| PREDICTED: F-box protein 7-like [Cucumis sativus]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/219 (83%), Positives = 206/219 (94%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           +LSGVVENYK LQS Y+GSWRKMWLLRPRIR DGLYVSRNTYIRAG+AEWKITNPVH+VC
Sbjct: 109 QLSGVVENYKFLQSMYDGSWRKMWLLRPRIRTDGLYVSRNTYIRAGIAEWKITNPVHLVC 168

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPGL 135
           Y+RY+RFFPSGRF+YKNSSQKIKDVAK MNFRA+KADC+F GHYTLS++KVEAAVLY G 
Sbjct: 169 YFRYIRFFPSGRFLYKNSSQKIKDVAKCMNFRASKADCIFGGHYTLSDDKVEAAVLYSGA 228

Query: 136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
           RPTVLRIR+RLRGT+ GANNRMDLL+LVTSGMN+NEV   +EDILG+VE W+DDETHNPD
Sbjct: 229 RPTVLRIRMRLRGTSTGANNRMDLLTLVTSGMNNNEVGDPEEDILGIVERWRDDETHNPD 288

Query: 196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           VPAVSHKRGLTPF+FVPF++VETS LNLPV+KMDY+VPG
Sbjct: 289 VPAVSHKRGLTPFIFVPFDQVETSELNLPVDKMDYFVPG 327

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845164|ref|XP_002890463.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297336305|gb|EFH66722.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/221 (79%), Positives = 202/221 (91%), Gaps = 2/221 (0%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           + +GV+ENYKILQS+Y+GSWRKMWLLR R+R DGLYVSRNTYIRAG+ EWKITNPVHIVC
Sbjct: 108 QTAGVIENYKILQSKYDGSWRKMWLLRSRVRTDGLYVSRNTYIRAGITEWKITNPVHIVC 167

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLS--EEKVEAAVLYP 133
           Y+RY+RF+PSGRF+YKNSSQK+KDVAK MNF+A+K+D ++ G YTLS  ++K+EAAVLYP
Sbjct: 168 YFRYIRFYPSGRFLYKNSSQKLKDVAKYMNFKASKSDSLYRGTYTLSMSDDKIEAAVLYP 227

Query: 134 GLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHN 193
           G RPTVLRIRLRLRGT  GANNRMDLLSLVTSG+ND E++  +EDILGVVEGW+DDETHN
Sbjct: 228 GTRPTVLRIRLRLRGTAIGANNRMDLLSLVTSGVNDEEISSTEEDILGVVEGWEDDETHN 287

Query: 194 PDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           PD+PAVSHKRG+TPFVFVPFEEVE SVLNLP EKMDYYV G
Sbjct: 288 PDIPAVSHKRGMTPFVFVPFEEVEQSVLNLPPEKMDYYVTG 328

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18395030|ref|NP_564150.1| F-box protein 7 [Arabidopsis thaliana] gi|75267563|sp|Q9XI00.1|SKI32_ARATH RecName: Full=F-box protein 7; AltName: Full=SKP1-interacting partner 32 gi|5263329|gb|AAD41431.1|AC007727_20 Contains PF|00646 F-box domain. ESTs gb|Z37267, gb|R90412, gb|Z37268 and gb|T88189 come from this gene [Arabidopsis thaliana] gi|30102634|gb|AAP21235.1| At1g21760 [Arabidopsis thaliana] gi|110736044|dbj|BAE99994.1| hypothetical protein [Arabidopsis thaliana] gi|332192032|gb|AEE30153.1| F-box protein 7 [Arabidopsis thaliana]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/221 (78%), Positives = 202/221 (91%), Gaps = 2/221 (0%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVC 75
           + +GV+ENYKILQS+Y+GSWRKMWLLR R+R DGLYVSRNTYIRAG+AEWKITNPVHIVC
Sbjct: 108 QTAGVIENYKILQSKYDGSWRKMWLLRSRVRTDGLYVSRNTYIRAGIAEWKITNPVHIVC 167

Query: 76  YYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLS--EEKVEAAVLYP 133
           YYRY+RF+PSGRF+YKNSSQK+KDVAK MNF+A+K++ ++ G YTLS  ++K+EAAVLYP
Sbjct: 168 YYRYIRFYPSGRFLYKNSSQKLKDVAKYMNFKASKSENLYKGTYTLSMSDDKIEAAVLYP 227

Query: 134 GLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHN 193
           G RPTVLRIRLRLRGT  GANNRMDLLSLVTSG+ND E++  +EDILG+VEGW+DDETHN
Sbjct: 228 GTRPTVLRIRLRLRGTAIGANNRMDLLSLVTSGVNDEEISSTEEDILGLVEGWEDDETHN 287

Query: 194 PDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           PD+PAVSHKRG+T FVFVPFEEV+ SVLNLP EKMDYYV G
Sbjct: 288 PDIPAVSHKRGMTAFVFVPFEEVDESVLNLPPEKMDYYVTG 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841577|emb|CAN62099.1| hypothetical protein VITISV_006219 [Vitis vinifera]

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 173/238 (72%), Positives = 190/238 (79%), Gaps = 37/238 (15%)

Query: 16  KLSGVVENYKILQSRYEGSWRKMWLLRPRIRID-------------------GLYVSRNT 56
           +LSGVVENYKILQSRYE SWRKMWLLRPR+R D                   GLYVSRNT
Sbjct: 77  QLSGVVENYKILQSRYESSWRKMWLLRPRVRTDDYHCFVTFCPERKFAFHISGLYVSRNT 136

Query: 57  YIRAGVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFT 116
           YIRAGVAEW++TNPVH+                  NSSQK+KDV K MN RA+KADCVF+
Sbjct: 137 YIRAGVAEWRVTNPVHV------------------NSSQKVKDVVKCMNSRASKADCVFS 178

Query: 117 GHYTLSEEKVEAAVLYPGLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHD 176
           GHYTLS++K+EAAVLYPG+RPTV RIRLRLRGTTAGANNRMDLLSLVTSG++DNEVNG D
Sbjct: 179 GHYTLSDDKIEAAVLYPGMRPTVWRIRLRLRGTTAGANNRMDLLSLVTSGVSDNEVNGPD 238

Query: 177 EDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
           EDILGVVEGW++DETHNPDVPAVSHKRGL  FVFVPFEEVETS LNLPV+KMDYYV G
Sbjct: 239 EDILGVVEGWEEDETHNPDVPAVSHKRGLKAFVFVPFEEVETSDLNLPVDKMDYYVAG 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	234
TAIR|locus:2036932	328	FBP7 "AT1G21760" [Arabidopsis	0.927	0.661	0.789	7.6e-96
MGI|MGI:1918788	437	Fbxo9 "f-box protein 9" [Mus m	0.388	0.208	0.402	1.4e-14
UNIPROTKB|Q3ZBT2	437	FBXO9 "F-box only protein 9" [	0.388	0.208	0.391	2.3e-14
UNIPROTKB|Q9UK97	447	FBXO9 "F-box only protein 9" [	0.388	0.203	0.391	2.4e-14
RGD|1310374	435	Fbxo9 "f-box protein 9" [Rattu	0.388	0.209	0.391	3.7e-14
UNIPROTKB|F6Y9J3	431	fbxo9 "F-box only protein 9" [	0.388	0.211	0.380	9.9e-14
ZFIN|ZDB-GENE-030131-4194	421	fbxo9 "F-box protein 9" [Danio	0.423	0.235	0.35	1.5e-12
POMBASE|SPCC1827.08c	361	pof7 "F-box protein Pof7" [Sch	0.517	0.335	0.288	4.2e-11
ASPGD|ASPL0000006907	534	fbx1 [Emericella nidulans (tax	0.235	0.102	0.460	2.8e-07
SGD|S000004087	344	HRT3 "Putative SCF-ubiquitin l	0.367	0.25	0.314	9.4e-05

TAIR|locus:2036932 FBP7 "AT1G21760" [Arabidopsis thaliana (taxid:3702)]

 Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
 Identities = 173/219 (78%), Positives = 201/219 (91%)

Query:    18 SGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYY 77
             +GV+ENYKILQS+Y+GSWRKMWLLR R+R DGLYVSRNTYIRAG+AEWKITNPVHIVCYY
Sbjct:   110 AGVIENYKILQSKYDGSWRKMWLLRSRVRTDGLYVSRNTYIRAGIAEWKITNPVHIVCYY 169

Query:    78 RYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLS--EEKVEAAVLYPGL 135
             RY+RF+PSGRF+YKNSSQK+KDVAK MNF+A+K++ ++ G YTLS  ++K+EAAVLYPG 
Sbjct:   170 RYIRFYPSGRFLYKNSSQKLKDVAKYMNFKASKSENLYKGTYTLSMSDDKIEAAVLYPGT 229

Query:   136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
             RPTVLRIRLRLRGT  GANNRMDLLSLVTSG+ND E++  +EDILG+VEGW+DDETHNPD
Sbjct:   230 RPTVLRIRLRLRGTAIGANNRMDLLSLVTSGVNDEEISSTEEDILGLVEGWEDDETHNPD 289

Query:   196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
             +PAVSHKRG+T FVFVPFEEV+ SVLNLP EKMDYYV G
Sbjct:   290 IPAVSHKRGMTAFVFVPFEEVDESVLNLPPEKMDYYVTG 328

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005634 "nucleus" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006417 "regulation of translation" evidence=IMP

GO:0009408 "response to heat" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

GO:0090406 "pollen tube" evidence=IDA

MGI|MGI:1918788 Fbxo9 "f-box protein 9" [Mus musculus (taxid:10090)]

 Score = 193 (73.0 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 37/92 (40%), Positives = 53/92 (57%)

Query:    34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
             SWR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRYMRFFP G  +   
Sbjct:   243 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYMRFFPDGHVMMLT 302

Query:    93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
             + ++   +   +  R  + D +  GHY LS++
Sbjct:   303 TPEEPPSIVPRLRTRNTRTDAILLGHYRLSQD 334

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISO

GO:0016567 "protein ubiquitination" evidence=ISO

GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO

GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=ISO

GO:0032006 "regulation of TOR signaling cascade" evidence=ISO

UNIPROTKB|Q3ZBT2 FBXO9 "F-box only protein 9" [Bos taurus (taxid:9913)]

 Score = 191 (72.3 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 36/92 (39%), Positives = 54/92 (58%)

Query:    34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
             SWR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRY+RFFP G  +   
Sbjct:   243 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYVRFFPDGHVMMLT 302

Query:    93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
             + ++ + +   +  R  + D +  GHY LS++
Sbjct:   303 TPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 334

GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0032006 "regulation of TOR signaling cascade" evidence=ISS

GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA;ISS

UNIPROTKB|Q9UK97 FBXO9 "F-box only protein 9" [Homo sapiens (taxid:9606)]

 Score = 191 (72.3 bits), Expect = 2.4e-14, P = 2.4e-14
 Identities = 36/92 (39%), Positives = 54/92 (58%)

Query:    34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
             SWR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRY+RFFP G  +   
Sbjct:   253 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLT 312

Query:    93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
             + ++ + +   +  R  + D +  GHY LS++
Sbjct:   313 TPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 344

GO:0004842 "ubiquitin-protein ligase activity" evidence=NAS

GO:0000151 "ubiquitin ligase complex" evidence=NAS

GO:0016567 "protein ubiquitination" evidence=IDA;NAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA

GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IDA

GO:0032006 "regulation of TOR signaling cascade" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

RGD|1310374 Fbxo9 "f-box protein 9" [Rattus norvegicus (taxid:10116)]

 Score = 189 (71.6 bits), Expect = 3.7e-14, P = 3.7e-14
 Identities = 36/92 (39%), Positives = 53/92 (57%)

Query:    34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
             SWR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRY+RFFP G  +   
Sbjct:   241 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLT 300

Query:    93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
             + ++   +   +  R  + D +  GHY LS++
Sbjct:   301 TPEEPPSIVPRLRTRNTRTDAILLGHYRLSQD 332

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0016567 "protein ubiquitination" evidence=IEA;ISO;ISS

GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS

GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=ISO;ISS

GO:0032006 "regulation of TOR signaling cascade" evidence=ISO;ISS

UNIPROTKB|F6Y9J3 fbxo9 "F-box only protein 9" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 185 (70.2 bits), Expect = 9.9e-14, P = 9.9e-14
 Identities = 35/92 (38%), Positives = 54/92 (58%)

Query:    34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
             +WR+M+L RPR+R DG+Y+S+ TYIR G           H V YYRY+RFFP G  +   
Sbjct:   236 TWRQMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYLRFFPDGHVMMLT 295

Query:    93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
             + +  + +   +  + A+ D +  GHY LS++
Sbjct:   296 TPEDPQTIVPRLRTKNARTDAMLLGHYRLSQD 327

GO:0005737 "cytoplasm" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=ISS

GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS

GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0032006 "regulation of TOR signaling cascade" evidence=ISS

ZFIN|ZDB-GENE-030131-4194 fbxo9 "F-box protein 9" [Danio rerio (taxid:7955)]

 Score = 174 (66.3 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 35/100 (35%), Positives = 55/100 (55%)

Query:    34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
             SWR+M+L RPR+R DG+Y+S+ +YIR G           H V YYRY+RFFP G+ +   
Sbjct:   226 SWREMFLERPRVRFDGVYISKTSYIRQGEESLDGFYRAWHQVEYYRYLRFFPDGQVMMLT 285

Query:    93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLY 132
             + +        +  + ++ D +  GHY LS++      +Y
Sbjct:   286 TPEDPLVTVPRLRSKNSRMDSIMFGHYRLSQDTDNQTKVY 325

GO:0032006 "regulation of TOR signaling cascade" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA;ISS

GO:0016567 "protein ubiquitination" evidence=ISS

GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS

POMBASE|SPCC1827.08c pof7 "F-box protein Pof7" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 167 (63.8 bits), Expect = 4.2e-11, P = 4.2e-11
 Identities = 39/135 (28%), Positives = 69/135 (51%)

Query:    27 LQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSG 86
             L  +Y+ SW+ ++L +PR R DG Y+S   Y R G ++     P+H++ YYRY+R +P+ 
Sbjct:   181 LVEKYQQSWKTLFLKKPRSRFDGCYISVCRYFRPGTSDTSWNQPIHLITYYRYLRLYPNS 240

Query:    87 RFIYKNSSQKIKDVAK---IMN---FRAAKADCVF-------TGHYTLSEEKVEAAVLYP 133
               I   SS +  DV +   + N   F    +  +F       TG ++++    E  ++YP
Sbjct:   241 TCIVYQSSNEPNDVVRNFSVQNTSLFSPMSSSPMFSNGNVALTGSWSMTPSG-EMLIVYP 299

Query:   134 GLRPTVLRIRLRLRG 148
               +      +L++RG
Sbjct:   300 ASQTYTYVQKLQVRG 314

GO:0000151 "ubiquitin ligase complex" evidence=ISM

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISM

GO:0030674 "protein binding, bridging" evidence=ISM

ASPGD|ASPL0000006907 fbx1 [Emericella nidulans (taxid:162425)]

 Score = 142 (55.0 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query:    34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAE------WKITNPVHIVCYYRYMRFFPSGR 87
             SW +++   PRIR  G+Y+S   Y RAG A       W   +P+HIV YYRY+RF+P G 
Sbjct:   301 SWSEVFHSFPRIRFTGVYISTVNYTRAGAASAYSNISWN--SPIHIVTYYRYLRFYPDGT 358

Query:    88 FIY 90
              IY
Sbjct:   359 VIY 361

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=IEA

GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA

GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0071406 "cellular response to methylmercury" evidence=IEA

SGD|S000004087 HRT3 "Putative SCF-ubiquitin ligase F-box protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 118 (46.6 bits), Expect = 9.4e-05, P = 9.4e-05
 Identities = 28/89 (31%), Positives = 49/89 (55%)

Query:    17 LSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGV-AEWKIT--NPVHI 73
             L+G+ +     +  + G   +M   RP I+ +G+Y+S   Y+R G  AE  ++   PVH+
Sbjct:   164 LNGITDINTFEKEIWRGDDYRMLRERPYIKFEGVYISVVNYVRYGSNAESSLSLLKPVHM 223

Query:    74 VCYYRYMRFFPSGRFIYKNSSQKIKDVAK 102
             + YYRY RF+ +G+ +   S+ +   V K
Sbjct:   224 ITYYRYFRFYENGQCLRLLSTDEPSAVVK 252


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      234       234   0.00087  113 3  11 22  0.39    33
                                                     32  0.43    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  197 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.92u 0.14s 19.06t   Elapsed:  00:00:00
  Total cpu time:  18.92u 0.14s 19.06t   Elapsed:  00:00:00
  Start:  Sat May 11 03:48:07 2013   End:  Sat May 11 03:48:07 2013

GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0030674 "protein binding, bridging" evidence=ISA

GO:0004842 "ubiquitin-protein ligase activity" evidence=ISA

GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IGI;ISA

GO:0071406 "cellular response to methylmercury" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9XI00	SKI32_ARATH	No assigned EC number	0.7828	0.9358	0.6676	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_102442.1 annotation not avaliable (328 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	234
KOG2997	366	consensus F-box protein FBX9 [General function pre	100.0
KOG2997	366	consensus F-box protein FBX9 [General function pre	83.16

>KOG2997 consensus F-box protein FBX9 [General function prediction only]

Probab=100.00  E-value=2.5e-51  Score=377.03  Aligned_cols=190  Identities=34%  Similarity=0.535  Sum_probs=174.2

Q ss_pred             cceeecChhhhhHhhhccccccHHHHHHhCCccccCcEEEEeeeeEecCcccc-cccCceEEEEEeeeEEEecCCeEEEe
Q 026730           13 SFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEW-KITNPVHIVCYYRYMRFFPSGRFIYK   91 (234)
Q Consensus        13 ~~~~l~~~~~~~~l~~~~y~~sWr~Mf~~RPrIRfdG~YIS~~tYiR~Ge~e~-s~~~Pvh~VtYYRYLRFfpDGtvl~l   91 (234)
                      --||.+++..+.++++++|.+|||+||++||||||||||||+|||||+|++++ +|++|||+|||||||||||||+|||+
T Consensus       158 KvW~~s~~~ln~~~~~sky~~SWR~Mfl~RpRvrFdG~YIS~~tYiR~G~~~~~~~~~PVHlV~YYRYiRFyP~G~~l~~  237 (366)
T KOG2997|consen  158 KVWQRSCIKLNPKILQSKYYTSWREMFLERPRVRFDGVYISKTTYIRQGENSLDSFYRPVHLVEYYRYIRFYPDGHVLML  237 (366)
T ss_pred             HHHHHhhhccchhhhhhHHHhHHHHHHhhCcceeecceEEEEEeEeecCchhhhhhcCcceeeEEEEEEEecCCCcEEEE
Confidence            35889999999999999999999999999999999999999999999999999 99999999999999999999999999


Q ss_pred             eccccHHHHhhhccccccCCCcEEEEEEEEeCCEEEEEEecCC------------------CcceEEEEEEEEecCCCCc
Q 026730           92 NSSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLYPG------------------LRPTVLRIRLRLRGTTAGA  153 (234)
Q Consensus        92 lS~~~P~~VV~~l~~~~~~~~~~~~G~~~L~~d~v~i~v~~pg------------------~~~~~f~~~L~lrs~~~g~  153 (234)
                      +|+++|++||++|+.++.+...++.|+|+++++.|++++..++                  ...++|.++|+|++++..+
T Consensus       238 ~SsdEP~dvVk~~s~~Nt~~~s~~~g~y~ls~~dv~~al~~~~~~~ps~~~~~r~~~~~v~~~s~tfl~~l~l~~~g~rr  317 (366)
T KOG2997|consen  238 TSSDEPQDVVKRLSTRNTRRDSILLGHYRLSQSDVFAALTKSKERTPSDYKYRRGRRVPVQEASQTFLVELQLCGSGHRR  317 (366)
T ss_pred             eCCcChHHHHHhhhhccCcchhhhcccccccCCchhhhhccCcccCchhhhhhcccccccccccceeEEEEEEecccchh
Confidence            9999999999999999988899999999999988877776321                  1346799999999999999


Q ss_pred             cceeEEeeeEEEecCCCCCCCCCCcccccccccccCCCCCCCCCcccccCCCcceEeeecccccccccc
Q 026730          154 NNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLN  222 (234)
Q Consensus       154 nnkL~w~~~~s~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rgl~~~~fvp~e~v~~~~ln  222 (234)
                      .|+|+|.++.                   +++|++.|++.++.|++.|+++ .-|++||+++++.+.||
T Consensus       318 ~~~L~W~~~~-------------------~~~~~d~et~~se~~l~~~k~~-~~FsrV~Sy~~d~e~l~  366 (366)
T KOG2997|consen  318 FNKLKWIHHS-------------------ITYKSDKETAVSEFPLTKMKTP-LFFSRVKSYTADSERLL  366 (366)
T ss_pred             hhhheeeeee-------------------eeEeecccccccCCccccccCc-ceEEEeeeeeccccccC
Confidence            9999988765                   2468888999999999999999 88999999999988875

>KOG2997 consensus F-box protein FBX9 [General function prediction only]

Probab=83.16  E-value=1.5  Score=41.95  Aligned_cols=18  Identities=6%  Similarity=-0.103  Sum_probs=10.3

Q ss_pred             cCceEEEEEeeeEEEecC
Q 026730           68 TNPVHIVCYYRYMRFFPS   85 (234)
Q Consensus        68 ~~Pvh~VtYYRYLRFfpD   85 (234)
                      +++-|-.--++|.-|--|
T Consensus       254 Nt~~~s~~~g~y~ls~~d  271 (366)
T KOG2997|consen  254 NTRRDSILLGHYRLSQSD  271 (366)
T ss_pred             cCcchhhhcccccccCCc
Confidence            455565556666655444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00