Citrus Sinensis ID: 026875
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 231 | ||||||
| 224063217 | 294 | predicted protein [Populus trichocarpa] | 0.948 | 0.744 | 0.788 | 3e-96 | |
| 255545698 | 1204 | conserved hypothetical protein [Ricinus | 0.943 | 0.181 | 0.793 | 8e-96 | |
| 224084676 | 294 | predicted protein [Populus trichocarpa] | 0.948 | 0.744 | 0.784 | 2e-94 | |
| 225459322 | 304 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.756 | 0.754 | 4e-93 | |
| 225459324 | 295 | PREDICTED: uncharacterized protein LOC10 | 0.956 | 0.749 | 0.732 | 2e-88 | |
| 147856521 | 342 | hypothetical protein VITISV_030871 [Viti | 0.991 | 0.669 | 0.721 | 7e-87 | |
| 225459326 | 286 | PREDICTED: uncharacterized protein LOC10 | 0.917 | 0.741 | 0.715 | 5e-86 | |
| 449450494 | 291 | PREDICTED: uncharacterized protein LOC10 | 0.926 | 0.735 | 0.724 | 8e-86 | |
| 358249210 | 280 | uncharacterized protein LOC100818758 [Gl | 0.896 | 0.739 | 0.719 | 2e-81 | |
| 356515800 | 285 | PREDICTED: uncharacterized protein LOC10 | 0.913 | 0.740 | 0.706 | 3e-80 |
| >gi|224063217|ref|XP_002301046.1| predicted protein [Populus trichocarpa] gi|118481505|gb|ABK92695.1| unknown [Populus trichocarpa] gi|222842772|gb|EEE80319.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/232 (78%), Positives = 205/232 (88%), Gaps = 13/232 (5%)
Query: 1 MKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKP 60
MKEMTGSGIFAA END +ESGSANPT N+KTGLRMYQQAIAGISHISF EE+S+SPKKP
Sbjct: 75 MKEMTGSGIFAANGENDLAESGSANPTANSKTGLRMYQQAIAGISHISFAEEESVSPKKP 134
Query: 61 TTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEILPRP-AVRALAL 119
TTLPEVAKQRELSGTLESES+A LKKQIS AKSKELSGHDIFAPPPEILPRP VRALAL
Sbjct: 135 TTLPEVAKQRELSGTLESESDAMLKKQISTAKSKELSGHDIFAPPPEILPRPTTVRALAL 194
Query: 120 KENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKG 179
+E+ LG+ +P++ PAGDQ S+EE V+KT+KKIY++KF+ELSGN++FKG
Sbjct: 195 QESIQLGEPSPRN---------PAGDQ---MSSEESVVKTAKKIYNQKFNELSGNNVFKG 242
Query: 180 DVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 231
D PPS+AEKPLSVAKLREMSGS+IF+DGKVESRDYLGGVRKPPGGESSIALV
Sbjct: 243 DAPPSTAEKPLSVAKLREMSGSDIFSDGKVESRDYLGGVRKPPGGESSIALV 294
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis] gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224084676|ref|XP_002307384.1| predicted protein [Populus trichocarpa] gi|222856833|gb|EEE94380.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225459322|ref|XP_002285797.1| PREDICTED: uncharacterized protein LOC100260886 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225459324|ref|XP_002285796.1| PREDICTED: uncharacterized protein LOC100260886 isoform 1 [Vitis vinifera] gi|147861247|emb|CAN81471.1| hypothetical protein VITISV_020507 [Vitis vinifera] gi|302141947|emb|CBI19150.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147856521|emb|CAN82836.1| hypothetical protein VITISV_030871 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225459326|ref|XP_002285798.1| PREDICTED: uncharacterized protein LOC100260886 isoform 3 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449450494|ref|XP_004142997.1| PREDICTED: uncharacterized protein LOC101215119 [Cucumis sativus] gi|449531599|ref|XP_004172773.1| PREDICTED: uncharacterized protein LOC101227622 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|358249210|ref|NP_001240011.1| uncharacterized protein LOC100818758 [Glycine max] gi|255642413|gb|ACU21470.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|356515800|ref|XP_003526586.1| PREDICTED: uncharacterized protein LOC100799950 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 231 | ||||||
| TAIR|locus:2140000 | 299 | AT4G39860 "AT4G39860" [Arabido | 0.978 | 0.755 | 0.622 | 4.4e-68 | |
| TAIR|locus:2060425 | 328 | AT2G22270 "AT2G22270" [Arabido | 0.943 | 0.664 | 0.482 | 2.2e-43 | |
| TAIR|locus:2011375 | 286 | AT1G35780 "AT1G35780" [Arabido | 0.757 | 0.611 | 0.550 | 5.7e-43 |
| TAIR|locus:2140000 AT4G39860 "AT4G39860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 145/233 (62%), Positives = 179/233 (76%)
Query: 1 MKEMTGSGIFAAGAENDESESGS-ANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKK 59
+KEMTGSGIF D+ + GS ++ T + KTGLR YQQ + G+S ISF + ++SPKK
Sbjct: 72 LKEMTGSGIFT-----DKGKVGSESDATTDPKTGLRYYQQTLNGMSQISFSADGNVSPKK 126
Query: 60 PTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEILPRPAVRALA- 118
PTTL EVAKQRELSG L +E++ K KQIS AK +E+SGHDIFAPP EI PR V A
Sbjct: 127 PTTLTEVAKQRELSGNLLTEADLKSNKQISSAKIEEISGHDIFAPPSEIQPRSLVAAQQE 186
Query: 119 LKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFK 178
+ N ++G+ AP++++TSV V PAG QS+I +EEPV+KTSKKI+++KF EL+GN IFK
Sbjct: 187 ARGNRDMGEPAPRNLRTSVKVSNPAGGQSNILFSEEPVVKTSKKIHNQKFQELTGNGIFK 246
Query: 179 GDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 231
GD P SA+K LS AKLREMSG+NIFADGK ESRDY GGVRKPPGGESSI+LV
Sbjct: 247 GDESPGSADKQLSSAKLREMSGNNIFADGKSESRDYFGGVRKPPGGESSISLV 299
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| TAIR|locus:2060425 AT2G22270 "AT2G22270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2011375 AT1G35780 "AT1G35780" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 231 | |||
| pfam13266 | 297 | pfam13266, DUF4057, Protein of unknown function (D | 1e-116 |
| >gnl|CDD|222016 pfam13266, DUF4057, Protein of unknown function (DUF4057) | Back alignment and domain information |
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Score = 334 bits (857), Expect = e-116
Identities = 170/230 (73%), Positives = 198/230 (86%), Gaps = 5/230 (2%)
Query: 1 MKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKP 60
+KEMTGSGIFAA END SES SANPT N KT LR QA AGIS ISF EE+S+SPKKP
Sbjct: 72 LKEMTGSGIFAANGENDASESASANPTAN-KTSLR---QAQAGISQISFSEEESVSPKKP 127
Query: 61 TTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEILPRP-AVRALAL 119
T++PEVAKQRELSGTLESE+++K+KKQIS+AKSKELSGHDIFAPPPEI PR A R L L
Sbjct: 128 TSVPEVAKQRELSGTLESEADSKMKKQISNAKSKELSGHDIFAPPPEIKPRSLAARLLEL 187
Query: 120 KENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKG 179
KEN + G+ AP++ +TSV V PAG QS+I +E+ V+KT+KKI+++KF+EL+GN+IFKG
Sbjct: 188 KENKDRGEPAPRNARTSVKVSNPAGGQSNIEFSEDSVVKTAKKIHNQKFTELTGNNIFKG 247
Query: 180 DVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIA 229
DVPP+SAEKPLS AKL+EMSGSNIFADGK ESRDYLGGVRKPPGGESSIA
Sbjct: 248 DVPPASAEKPLSTAKLKEMSGSNIFADGKAESRDYLGGVRKPPGGESSIA 297
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This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 279 and 322 amino acids in length. Length = 297 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 231 | |||
| PF13266 | 302 | DUF4057: Protein of unknown function (DUF4057) | 100.0 | |
| PF13266 | 302 | DUF4057: Protein of unknown function (DUF4057) | 99.94 |
| >PF13266 DUF4057: Protein of unknown function (DUF4057) | Back alignment and domain information |
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Probab=100.00 E-value=1.4e-97 Score=670.52 Aligned_cols=228 Identities=75% Similarity=1.100 Sum_probs=222.1
Q ss_pred CcccccccCcCCCCCCCCCCCCCCCCCCCCCCCccccccccCCccceecCCCCCCCCCCCCChhhhhhhhhccCCCCCch
Q 026875 1 MKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESES 80 (231)
Q Consensus 1 ~KEmsGs~IFa~~~e~~~~e~~~~~~~~~~~t~~r~~q~~~~g~S~IsFgee~~vtpKK~ts~~evAKqrELSGn~isd~ 80 (231)
||||||||||++++++.+++.+.++ +.+++|++|||||+.+|+|||||++|++|+|||||+++|||||||||||+++++
T Consensus 74 ~KEmTGSGIF~~~~e~~~se~~san-~~~~rt~vr~yQq~~~giSqISF~~eesvsPKKpts~~EVAKQRELSGTlese~ 152 (302)
T PF13266_consen 74 MKEMTGSGIFSANGEDDASESGSAN-PTPNRTGVRMYQQAINGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESEA 152 (302)
T ss_pred ceecccccccccCCCCcccccccCC-CCccccccceecccccccceeeecCCCCcCCCCccchHHHHHHhhhcCccccch
Confidence 8999999999999999999988766 345799999999999999999999999999999999999999999999999999
Q ss_pred hHHhhhhhhhhhhhhhcCCCCcCCCCCCCCchHH-HHHHhhhccCCCCCCCCCccccccccCCCCCCCCcccCCccchhh
Q 026875 81 EAKLKKQISDAKSKELSGHDIFAPPPEILPRPAV-RALALKENFNLGDSAPQDVQTSVGVLTPAGDQSSISSTEEPVMKT 159 (231)
Q Consensus 81 ~~~~~KqlS~AK~KEmSGsdIFAdp~~~~pr~~~-~~~~~~~~~~~~~p~~r~~~ts~~~~~~ag~~s~~~f~e~~~~kt 159 (231)
|.+++||+|+||+||||||||||||++++||+++ +.||+++|+++++|.+|++||+|+|+|++|++|+|+|++|+|+||
T Consensus 153 D~k~kkq~S~AK~KELSGhdIFapp~~~~pr~~~~r~le~k~~~~~~e~~~~~~~ts~~~~n~a~~~s~~~~~~~~~~Kt 232 (302)
T PF13266_consen 153 DSKMKKQISNAKSKELSGHDIFAPPPEIKPRSLTARSLELKENKDRGEPAPRNVRTSVKVSNPAGGQSNIEFGEDSVVKT 232 (302)
T ss_pred hhHHHhhhhhhhhhhcccCcccCCCccCCCCcchhhhhhhcccccccCCCCCcccccccccCCcCcccccccccCcchhh
Confidence 9999999999999999999999999999999975 899999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccCCCcCCCCCCCCCCCCcchhhhhhhhcCCCcCCCCCcCccccCCCcccCCCCCCCcc
Q 026875 160 SKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIA 229 (231)
Q Consensus 160 ~kki~~~K~~eltGN~IFk~d~~~~s~eK~lS~AKlrEmsGsdIFaDgk~~~Rd~~ggvrkPPGGeSSIa 229 (231)
+||||+|||+||+||||||+|.|++++||+||+||||||+|+|||||||+++|||+|||||||||+||||
T Consensus 233 akki~~~K~aeltGN~IFk~d~p~~saek~lS~AKlrEmsGsdIFaDgk~~~rd~~gg~rkPPGG~SSIa 302 (302)
T PF13266_consen 233 AKKISNQKFAELTGNNIFKGDVPPASAEKPLSSAKLREMSGSDIFADGKAESRDYLGGVRKPPGGESSIA 302 (302)
T ss_pred hhhhhhhhhhhcccCcccCCCCCCCCcccchhhhhHhhcccccccccCCcccchhcCCccCCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
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| >PF13266 DUF4057: Protein of unknown function (DUF4057) | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00